Search of human proteins with 45269133

Search of human proteins with 45269133

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|45269133 glial cells missing homolog a [Homo sapiens]
         (436 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|45269133 glial cells missing homolog a [Homo sapiens]              929   0.0  
gi|4758420 glial cells missing homolog 2 [Homo sapiens]               238   1e-62
gi|28872794 CCAAT/enhancer binding protein alpha [Homo sapiens]        36   0.060
gi|190886437 RALBP1 associated Eps domain containing 1 isoform b...    34   0.30 
gi|116292168 KRAB A domain containing 1 [Homo sapiens]                 33   0.51 
gi|154426272 hypothetical protein LOC54540 [Homo sapiens]              32   0.87 
gi|47419907 T-box 3 protein isoform 2 [Homo sapiens]                   32   1.1  
gi|47419905 T-box 3 protein isoform 1 [Homo sapiens]                   32   1.1  
gi|237512940 early growth response 4 [Homo sapiens]                    32   1.1  
gi|116284398 WAS/WASL interacting protein family, member 1 [Homo...    32   1.5  
gi|38373695 WAS/WASL interacting protein family, member 1 [Homo ...    32   1.5  
gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens]         31   1.9  
gi|145309309 ubiquitin specific protease 9, X-linked isoform 3 [...    31   1.9  
gi|148806928 hypothetical protein LOC57482 [Homo sapiens]              31   2.5  
gi|32967605 bromodomain adjacent to zinc finger domain, 1A isofo...    31   2.5  
gi|32967603 bromodomain adjacent to zinc finger domain, 1A isofo...    31   2.5  
gi|10092601 eukaryotic translation initiation factor 4 gamma, 3 ...    31   2.5  
gi|58530876 melanoma antigen family C, 1 [Homo sapiens]                30   3.3  
gi|55770860 T-box 15 [Homo sapiens]                                    30   3.3  
gi|145309311 ubiquitin specific protease 9, X-linked isoform 4 [...    30   4.3  
gi|47419930 chondroitin sulfate proteoglycan 4 [Homo sapiens]          30   5.6  
gi|4507339 transcription factor T [Homo sapiens]                       30   5.6  
gi|32307142 phosphatidylinositol transfer protein, cytoplasmic 1...    30   5.6  
gi|32307140 phosphatidylinositol transfer protein, cytoplasmic 1...    30   5.6  
gi|110735445 forkhead box F1 [Homo sapiens]                            29   7.3  
gi|161169017 neuron navigator 2 isoform 4 [Homo sapiens]               29   7.3  
gi|161169015 neuron navigator 2 isoform 3 [Homo sapiens]               29   7.3  
gi|161169013 neuron navigator 2 isoform 1 [Homo sapiens]               29   7.3  
gi|38044282 neuron navigator 2 isoform 2 [Homo sapiens]                29   7.3  
gi|30794216 tripartite motif-containing 56 [Homo sapiens]              29   7.3  

>gi|45269133 glial cells missing homolog a [Homo sapiens]
          Length = 436

 Score =  929 bits (2401), Expect = 0.0
 Identities = 436/436 (100%), Positives = 436/436 (100%)

Query: 1   MEPDDFDSEDKEILSWDINDVKLPQNVKKTDWFQEWPDSYAKHIYSSEDKNAQRHLSSWA 60
           MEPDDFDSEDKEILSWDINDVKLPQNVKKTDWFQEWPDSYAKHIYSSEDKNAQRHLSSWA
Sbjct: 1   MEPDDFDSEDKEILSWDINDVKLPQNVKKTDWFQEWPDSYAKHIYSSEDKNAQRHLSSWA 60

Query: 61  MRNTNNHNSRILKKSCLGVVVCGRDCLAEEGRKIYLRPAICDKARQKQQRKRCPNCDGPL 120
           MRNTNNHNSRILKKSCLGVVVCGRDCLAEEGRKIYLRPAICDKARQKQQRKRCPNCDGPL
Sbjct: 61  MRNTNNHNSRILKKSCLGVVVCGRDCLAEEGRKIYLRPAICDKARQKQQRKRCPNCDGPL 120

Query: 121 KLIPCRGHGGFPVTNFWRHDGRFIFFQSKGEHDHPKPETKLEAEARRAMKKVNTAPSSVS 180
           KLIPCRGHGGFPVTNFWRHDGRFIFFQSKGEHDHPKPETKLEAEARRAMKKVNTAPSSVS
Sbjct: 121 KLIPCRGHGGFPVTNFWRHDGRFIFFQSKGEHDHPKPETKLEAEARRAMKKVNTAPSSVS 180

Query: 181 LSLKGSTETRSLPGETQSQGSLPLTWSFQEGVQLPGSYSGHLIANTPQQNSLNDCFSFSK 240
           LSLKGSTETRSLPGETQSQGSLPLTWSFQEGVQLPGSYSGHLIANTPQQNSLNDCFSFSK
Sbjct: 181 LSLKGSTETRSLPGETQSQGSLPLTWSFQEGVQLPGSYSGHLIANTPQQNSLNDCFSFSK 240

Query: 241 SYGLGGITDLTDQTSTVDPMKLYEKRKLSSSRTYSSGDLLPPSASGVYSDHGDLQAWSKN 300
           SYGLGGITDLTDQTSTVDPMKLYEKRKLSSSRTYSSGDLLPPSASGVYSDHGDLQAWSKN
Sbjct: 241 SYGLGGITDLTDQTSTVDPMKLYEKRKLSSSRTYSSGDLLPPSASGVYSDHGDLQAWSKN 300

Query: 301 AALGRNHLADNCYSNYPFPLTSWPCSFSPSQNSSEPFYQQLPLEPPAAKTGCPPLWPNPA 360
           AALGRNHLADNCYSNYPFPLTSWPCSFSPSQNSSEPFYQQLPLEPPAAKTGCPPLWPNPA
Sbjct: 301 AALGRNHLADNCYSNYPFPLTSWPCSFSPSQNSSEPFYQQLPLEPPAAKTGCPPLWPNPA 360

Query: 361 GNLYEEKVHVDFNSYVQSPAYHSPQEDPFLFTYASHPHQQYSLPSKSSKWDFEEEMTYLG 420
           GNLYEEKVHVDFNSYVQSPAYHSPQEDPFLFTYASHPHQQYSLPSKSSKWDFEEEMTYLG
Sbjct: 361 GNLYEEKVHVDFNSYVQSPAYHSPQEDPFLFTYASHPHQQYSLPSKSSKWDFEEEMTYLG 420

Query: 421 LDHCNNDMLLNLCPLR 436
           LDHCNNDMLLNLCPLR
Sbjct: 421 LDHCNNDMLLNLCPLR 436


>gi|4758420 glial cells missing homolog 2 [Homo sapiens]
          Length = 506

 Score =  238 bits (606), Expect = 1e-62
 Identities = 106/158 (67%), Positives = 124/158 (78%)

Query: 14  LSWDINDVKLPQNVKKTDWFQEWPDSYAKHIYSSEDKNAQRHLSSWAMRNTNNHNSRILK 73
           LSWDIND ++PQ +   D F+EWPD Y + IYSS++K AQRHLS WAMRNTNNHN  ILK
Sbjct: 19  LSWDINDPQMPQELALFDQFREWPDGYVRFIYSSDEKKAQRHLSGWAMRNTNNHNGHILK 78

Query: 74  KSCLGVVVCGRDCLAEEGRKIYLRPAICDKARQKQQRKRCPNCDGPLKLIPCRGHGGFPV 133
           KSCLGVVVC + C   +G ++ LRPAICDKAR KQQ+K CPNC   L+LIPCRGH G+PV
Sbjct: 79  KSCLGVVVCTQACTLPDGSRLQLRPAICDKARLKQQKKACPNCHSALELIPCRGHSGYPV 138

Query: 134 TNFWRHDGRFIFFQSKGEHDHPKPETKLEAEARRAMKK 171
           TNFWR DG  IFFQ+KG HDHP+PE+K E EARR+  K
Sbjct: 139 TNFWRLDGNAIFFQAKGVHDHPRPESKSETEARRSAIK 176


>gi|28872794 CCAAT/enhancer binding protein alpha [Homo sapiens]
          Length = 358

 Score = 36.2 bits (82), Expect = 0.060
 Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 9/59 (15%)

Query: 342 PLEPPAAKTGCPPLWPNPAGNLYEEKVHVDFNSYVQSPAYHSPQEDPFLFTYASHPHQQ 400
           P +PPA     PP  P P G + E +  +D ++Y+   A++    D FL     H  QQ
Sbjct: 39  PAQPPA-----PPAAPEPLGGICEHETSIDISAYIDPAAFN----DEFLADLFQHSRQQ 88


>gi|190886437 RALBP1 associated Eps domain containing 1 isoform b
           [Homo sapiens]
          Length = 769

 Score = 33.9 bits (76), Expect = 0.30
 Identities = 43/172 (25%), Positives = 64/172 (37%), Gaps = 19/172 (11%)

Query: 248 TDLTDQTST--VDPMKLYEKRKLSSSRTYSSGDLLPPSASGVYSDHGDLQAWSKNAALGR 305
           +D T+ TS   V P  L E+ K++SS  ++SG+ +    S   S   D +    N    R
Sbjct: 448 SDHTNPTSPLLVKPSDLLEENKINSSVKFASGNTVADGYSSSDSFTSDPEQIGSNVTRQR 507

Query: 306 NHLA---DNCYSNYPFPLTSWPCSFSPSQNSSEPFYQQLPLEPPAAKTGCPPLWPNPAGN 362
           +H     DN     P P      S S S + +  F      +        P + P P   
Sbjct: 508 SHSGTSPDNTAPPPPPPRPQPSHSRSSSLDMNRTFTVTTGQQQAGVVAHPPAVPPRPQ-- 565

Query: 363 LYEEKVHVDFNSYVQSPAYHSPQEDPFLFTYASHPHQQYSLPSKSSKWDFEE 414
                      S    PA H P +   L T+ S   QQ  +P + +  DF +
Sbjct: 566 ----------PSQAPGPAVHRPVDADGLITHTSTSPQQ--IPEQPNFADFSQ 605


>gi|116292168 KRAB A domain containing 1 [Homo sapiens]
          Length = 1030

 Score = 33.1 bits (74), Expect = 0.51
 Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 6/65 (9%)

Query: 108 QQRKRCPNCDGPLKLIPCRG------HGGFPVTNFWRHDGRFIFFQSKGEHDHPKPETKL 161
           Q+R R P+C  P+ L PC G       GG P  +  R + R+      G    P P ++L
Sbjct: 668 QERDRLPSCKPPVPLSPCPGGTPAGSSGGSPGEDPRRTEPRYCSGLGAGTAQDPCPVSQL 727

Query: 162 EAEAR 166
           E   R
Sbjct: 728 EKRPR 732


>gi|154426272 hypothetical protein LOC54540 [Homo sapiens]
          Length = 789

 Score = 32.3 bits (72), Expect = 0.87
 Identities = 20/66 (30%), Positives = 25/66 (37%), Gaps = 6/66 (9%)

Query: 346 PAAKTGCPPLWPNPAGNLYEEKVHVDFNSYVQSPAYHSPQ------EDPFLFTYASHPHQ 399
           P +  G PP  P  A  + E   H D  +   SP  H PQ        P  F    HPH 
Sbjct: 105 PGSSLGSPPTIPGEAFPVSEHHQHSDLTAPPNSPTGHHPQPASLIPSHPSSFGSPPHPHL 164

Query: 400 QYSLPS 405
             + P+
Sbjct: 165 LPTTPA 170


>gi|47419907 T-box 3 protein isoform 2 [Homo sapiens]
          Length = 743

 Score = 32.0 bits (71), Expect = 1.1
 Identities = 30/111 (27%), Positives = 45/111 (40%), Gaps = 23/111 (20%)

Query: 161 LEAEARRAMKKVNTAPSSVSLSLKGSTETRSLPGETQ---------------SQGSLPLT 205
           L AE RR+  +  TAP+ V        E R+LPG+                 +QG LP  
Sbjct: 449 LGAEERRSPVREGTAPAKVE-------EARALPGKEAFAPLTVQTDAAAAHLAQGPLP-G 500

Query: 206 WSFQEGVQLPGSYSGHLIANTPQQNSLNDCFSFSKSYGLGGITDLTDQTST 256
             F  G+     ++GH +   P Q ++   FS   + G+G +       ST
Sbjct: 501 LGFAPGLAGQQFFNGHPLFLHPSQFAMGGAFSSMAAAGMGPLLATVSGAST 551


>gi|47419905 T-box 3 protein isoform 1 [Homo sapiens]
          Length = 723

 Score = 32.0 bits (71), Expect = 1.1
 Identities = 30/111 (27%), Positives = 45/111 (40%), Gaps = 23/111 (20%)

Query: 161 LEAEARRAMKKVNTAPSSVSLSLKGSTETRSLPGETQ---------------SQGSLPLT 205
           L AE RR+  +  TAP+ V        E R+LPG+                 +QG LP  
Sbjct: 429 LGAEERRSPVREGTAPAKVE-------EARALPGKEAFAPLTVQTDAAAAHLAQGPLP-G 480

Query: 206 WSFQEGVQLPGSYSGHLIANTPQQNSLNDCFSFSKSYGLGGITDLTDQTST 256
             F  G+     ++GH +   P Q ++   FS   + G+G +       ST
Sbjct: 481 LGFAPGLAGQQFFNGHPLFLHPSQFAMGGAFSSMAAAGMGPLLATVSGAST 531


>gi|237512940 early growth response 4 [Homo sapiens]
          Length = 589

 Score = 32.0 bits (71), Expect = 1.1
 Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 6/64 (9%)

Query: 282 PSASGVYSDHGDLQAWSKNAALGRNHLADNCYSNYPFPLTSWPCSFSPSQNSSEPFYQQL 341
           P+A+G Y   GD  +W+ N+      LAD+C+   P P      S+S S      F Q +
Sbjct: 141 PAATG-YPGAGDFLSWALNSCGASGDLADSCFLEGPAPTPPPGLSYSGSF-----FIQAV 194

Query: 342 PLEP 345
           P  P
Sbjct: 195 PEHP 198


>gi|116284398 WAS/WASL interacting protein family, member 1 [Homo
           sapiens]
          Length = 503

 Score = 31.6 bits (70), Expect = 1.5
 Identities = 29/97 (29%), Positives = 41/97 (42%), Gaps = 10/97 (10%)

Query: 268 LSSSRTYSSGDLLPPSASGVYSDHGDLQA--WSKNAALGRNHLADNCYSNYPFPLTSWPC 325
           LSSS  +S+   LPP+ S    D             ++ R  +      N   P+ S P 
Sbjct: 240 LSSSSPFSNRPPLPPTPSRALDDKPPPPPPPVGNRPSIHREAVPPPPPQNNKPPVPSTP- 298

Query: 326 SFSPSQNSSEPFYQQLPLEPPAAKTGCPPLWPNPAGN 362
              PS +S  P     P  PP ++ G PPL P+ +GN
Sbjct: 299 --RPSASSQAP-----PPPPPPSRPGPPPLPPSSSGN 328


>gi|38373695 WAS/WASL interacting protein family, member 1 [Homo
           sapiens]
          Length = 503

 Score = 31.6 bits (70), Expect = 1.5
 Identities = 29/97 (29%), Positives = 41/97 (42%), Gaps = 10/97 (10%)

Query: 268 LSSSRTYSSGDLLPPSASGVYSDHGDLQA--WSKNAALGRNHLADNCYSNYPFPLTSWPC 325
           LSSS  +S+   LPP+ S    D             ++ R  +      N   P+ S P 
Sbjct: 240 LSSSSPFSNRPPLPPTPSRALDDKPPPPPPPVGNRPSIHREAVPPPPPQNNKPPVPSTP- 298

Query: 326 SFSPSQNSSEPFYQQLPLEPPAAKTGCPPLWPNPAGN 362
              PS +S  P     P  PP ++ G PPL P+ +GN
Sbjct: 299 --RPSASSQAP-----PPPPPPSRPGPPPLPPSSSGN 328


>gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens]
          Length = 1312

 Score = 31.2 bits (69), Expect = 1.9
 Identities = 28/88 (31%), Positives = 37/88 (42%), Gaps = 9/88 (10%)

Query: 328 SPSQNSSEPFYQQLPLEPPAAKTGCPPLWPNPAGNLYEEKVHVDFNSYVQSPAYHSPQED 387
           SPS +SS P        PP      PP  P P  ++Y +  H    +Y   PA    + D
Sbjct: 198 SPSPSSSSPS------PPPPPPPPAPPAPPAPRFDIY-DPFHPTDEAYSPPPA-PEQKYD 249

Query: 388 PFLFTYASHPHQQYSLPSKSSKWDFEEE 415
           PF  T  S+P      PS   + + EEE
Sbjct: 250 PFEPT-GSNPSSSAGTPSPEEEEEEEEE 276


>gi|145309309 ubiquitin specific protease 9, X-linked isoform 3 [Homo
            sapiens]
          Length = 2570

 Score = 31.2 bits (69), Expect = 1.9
 Identities = 16/52 (30%), Positives = 24/52 (46%)

Query: 331  QNSSEPFYQQLPLEPPAAKTGCPPLWPNPAGNLYEEKVHVDFNSYVQSPAYH 382
            + S EP  Q  P E  +      PL+P+  G+ Y++  HV    Y    A+H
Sbjct: 2490 EESKEPDDQDAPDEHESPPPEDAPLYPHSPGSQYQQNNHVHGQPYTGPAAHH 2541


>gi|148806928 hypothetical protein LOC57482 [Homo sapiens]
          Length = 1233

 Score = 30.8 bits (68), Expect = 2.5
 Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 1/52 (1%)

Query: 153  DHPKPETKLEA-EARRAMKKVNTAPSSVSLSLKGSTETRSLPGETQSQGSLP 203
            +  +PET +   E R  +KK NT P+SV++ +  S     L  E   + S P
Sbjct: 1152 EEKRPETAVSRLERREQLKKANTLPTSVTVEISDSAPPAPLVKEVTKRFSTP 1203


>gi|32967605 bromodomain adjacent to zinc finger domain, 1A isoform b
            [Homo sapiens]
          Length = 1524

 Score = 30.8 bits (68), Expect = 2.5
 Identities = 26/99 (26%), Positives = 43/99 (43%), Gaps = 18/99 (18%)

Query: 146  FQSKGEHDHP----------KPETKLEAEARRAMKKVNTAPSSVSLSLK-GSTETRSLPG 194
            F S+G+   P           P+T + ++  R+++K+N+AP + + SL+  S  TR   G
Sbjct: 1250 FSSRGQQQEPGRYPSRSQQSTPKTTVSSKTGRSLRKINSAPPTETKSLRIASRSTRHSHG 1309

Query: 195  ETQSQGSLPLTWSFQEGVQLPGSYSGHLIANTPQQNSLN 233
              Q+         F E +       G   AN   +NS N
Sbjct: 1310 PLQAD-------VFVELLSPRRKRRGRKSANNTPENSPN 1341


>gi|32967603 bromodomain adjacent to zinc finger domain, 1A isoform a
            [Homo sapiens]
          Length = 1556

 Score = 30.8 bits (68), Expect = 2.5
 Identities = 26/99 (26%), Positives = 43/99 (43%), Gaps = 18/99 (18%)

Query: 146  FQSKGEHDHP----------KPETKLEAEARRAMKKVNTAPSSVSLSLK-GSTETRSLPG 194
            F S+G+   P           P+T + ++  R+++K+N+AP + + SL+  S  TR   G
Sbjct: 1282 FSSRGQQQEPGRYPSRSQQSTPKTTVSSKTGRSLRKINSAPPTETKSLRIASRSTRHSHG 1341

Query: 195  ETQSQGSLPLTWSFQEGVQLPGSYSGHLIANTPQQNSLN 233
              Q+         F E +       G   AN   +NS N
Sbjct: 1342 PLQAD-------VFVELLSPRRKRRGRKSANNTPENSPN 1373


>gi|10092601 eukaryotic translation initiation factor 4 gamma, 3
           [Homo sapiens]
          Length = 1585

 Score = 30.8 bits (68), Expect = 2.5
 Identities = 28/97 (28%), Positives = 36/97 (37%), Gaps = 18/97 (18%)

Query: 317 PFPLTSWPCSFSPSQNSSEPFY----QQLPLEPPAAKTGCPPLWPNPAGNLYEEKVHVDF 372
           P+P+   P    P    S P Y    QQ P++PP    G  P +P P    +       F
Sbjct: 57  PYPVPQGPQYCIPQYRHSGPPYVGPPQQYPVQPP----GPGPFYPGPGPGDFPNAYGTPF 112

Query: 373 NSYVQSPAYHSPQEDPFLFTYASHPHQQYSLPSKSSK 409
             Y   P Y   Q  P +      P QQ   P+K  K
Sbjct: 113 --YPSQPVY---QSAPIIV-----PTQQQPPPAKREK 139


>gi|58530876 melanoma antigen family C, 1 [Homo sapiens]
          Length = 1142

 Score = 30.4 bits (67), Expect = 3.3
 Identities = 35/133 (26%), Positives = 58/133 (43%), Gaps = 7/133 (5%)

Query: 132 PVTNFWRHDGRFIFFQSKGEHDHPKPETKLEAEARRAMKK-VNTAPSSVSLSLKGSTETR 190
           PV++F+ +        S  +  H  P++  E  A+  ++  V++ PSS S SL  S+   
Sbjct: 778 PVSSFFSYT-----LASLLQSSHESPQSPPEGPAQSPLQSPVSSFPSSTSSSLSQSSPVS 832

Query: 191 SLPGETQSQGSLPLTWSFQEGVQLPGSYSGHLIANTPQQNSLNDCFSFSKSYGLGGITDL 250
           S P  T S  S     S  +   +  S S  L   + + +S  D ++ S S  L     L
Sbjct: 833 SFPSSTSSSLSKSSPESPLQSPVISFSSSTSLSPFSEESSSPVDEYT-SSSDTLLESDSL 891

Query: 251 TDQTSTVDPMKLY 263
           TD  S ++   L+
Sbjct: 892 TDSESLIESEPLF 904


>gi|55770860 T-box 15 [Homo sapiens]
          Length = 496

 Score = 30.4 bits (67), Expect = 3.3
 Identities = 21/81 (25%), Positives = 31/81 (38%)

Query: 182 SLKGSTETRSLPGETQSQGSLPLTWSFQEGVQLPGSYSGHLIANTPQQNSLNDCFSFSKS 241
           SL G+++  +  G+  S  +    +  Q G     S S H+   +  Q S  + FS    
Sbjct: 349 SLPGNSKMEAYGGQLGSFPTSQFQYVMQAGNAASSSSSPHMFGGSHMQQSSYNAFSLHNP 408

Query: 242 YGLGGITDLTDQTSTVDPMKL 262
           Y L G    T       P KL
Sbjct: 409 YNLYGYNFPTSPRLAASPEKL 429


>gi|145309311 ubiquitin specific protease 9, X-linked isoform 4 [Homo
            sapiens]
          Length = 2554

 Score = 30.0 bits (66), Expect = 4.3
 Identities = 17/58 (29%), Positives = 25/58 (43%), Gaps = 3/58 (5%)

Query: 325  CSFSPSQNSSEPFYQQLPLEPPAAKTGCPPLWPNPAGNLYEEKVHVDFNSYVQSPAYH 382
            C   P +   EP  Q  P E  +      PL+P+  G+ Y++  HV    Y    A+H
Sbjct: 2471 CELCPEE---EPDDQDAPDEHESPPPEDAPLYPHSPGSQYQQNNHVHGQPYTGPAAHH 2525


>gi|47419930 chondroitin sulfate proteoglycan 4 [Homo sapiens]
          Length = 2322

 Score = 29.6 bits (65), Expect = 5.6
 Identities = 25/72 (34%), Positives = 27/72 (37%), Gaps = 12/72 (16%)

Query: 140  DGRFIFFQSKGEHDHPKPETKLEAEARRAMKKVNTAPSSVSLSLKGSTETRSLPGETQSQ 199
            DG F F  S GEH  P    ++            TA   V LSLKGS      PG  Q  
Sbjct: 1553 DGGFRFRLSDGEHTSPGHFFRV------------TAQKQVLLSLKGSQTLTVCPGSVQPL 1600

Query: 200  GSLPLTWSFQEG 211
             S  L  S   G
Sbjct: 1601 SSQTLRASSSAG 1612


>gi|4507339 transcription factor T [Homo sapiens]
          Length = 435

 Score = 29.6 bits (65), Expect = 5.6
 Identities = 19/67 (28%), Positives = 27/67 (40%), Gaps = 11/67 (16%)

Query: 332 NSSEPFYQQLPLEPPAAKTGCPPLWPNPAGNLYEEKVHVDFNSYVQSPAYHSPQEDPFLF 391
           +S +P Y Q     P   T CPP  P+P            F   +  P+ HS    P L 
Sbjct: 235 DSQQPGYSQWGWLLPGTSTLCPPANPHP-----------QFGGALSLPSTHSCDRYPTLR 283

Query: 392 TYASHPH 398
           ++ S P+
Sbjct: 284 SHRSSPY 290


>gi|32307142 phosphatidylinositol transfer protein, cytoplasmic 1
           isoform b [Homo sapiens]
          Length = 268

 Score = 29.6 bits (65), Expect = 5.6
 Identities = 19/95 (20%), Positives = 38/95 (40%), Gaps = 6/95 (6%)

Query: 294 LQAWSKNAALGRNHLADNCYSNYPFPLTSWPCSFSPSQNSSEPFYQQLPLEPPAAKTGCP 353
           L +W++       ++ +  ++ YP+ +T + CSF P       F   +  +    K    
Sbjct: 68  LPSWARAVVPKIFYVTEKAWNYYPYTITEYTCSFLPK------FSIHIETKYEDNKGSND 121

Query: 354 PLWPNPAGNLYEEKVHVDFNSYVQSPAYHSPQEDP 388
            ++ N A ++  E   +D         Y+   EDP
Sbjct: 122 TIFDNEAKDVEREVCFIDIACDEIPERYYKESEDP 156


>gi|32307140 phosphatidylinositol transfer protein, cytoplasmic 1
           isoform a [Homo sapiens]
          Length = 332

 Score = 29.6 bits (65), Expect = 5.6
 Identities = 19/95 (20%), Positives = 38/95 (40%), Gaps = 6/95 (6%)

Query: 294 LQAWSKNAALGRNHLADNCYSNYPFPLTSWPCSFSPSQNSSEPFYQQLPLEPPAAKTGCP 353
           L +W++       ++ +  ++ YP+ +T + CSF P       F   +  +    K    
Sbjct: 68  LPSWARAVVPKIFYVTEKAWNYYPYTITEYTCSFLPK------FSIHIETKYEDNKGSND 121

Query: 354 PLWPNPAGNLYEEKVHVDFNSYVQSPAYHSPQEDP 388
            ++ N A ++  E   +D         Y+   EDP
Sbjct: 122 TIFDNEAKDVEREVCFIDIACDEIPERYYKESEDP 156


>gi|110735445 forkhead box F1 [Homo sapiens]
          Length = 379

 Score = 29.3 bits (64), Expect = 7.3
 Identities = 34/148 (22%), Positives = 58/148 (39%), Gaps = 7/148 (4%)

Query: 283 SASGVYSDHGDLQAWSKNAALGRNHLADNCYSNYPFPLTSWPCSFSPSQNSSEPFYQQLP 342
           +A+G Y  H      S     G   + +  ++ Y     +WP S S + NS   + +Q P
Sbjct: 231 AAAGEYPHHDSSVPASPLLPTGAGGVMEP-HAVYSGSAAAWPPSASAALNSGASYIKQQP 289

Query: 343 LEP--PAAKTGCPPLWPNPAGNLYEEKVHVDFNSYVQS-PAYHSPQE---DPFLFTYASH 396
           L P  PAA      L  +     Y  +   +  + +Q  P YHS      D   F ++ +
Sbjct: 290 LSPCNPAANPLSGSLSTHSLEQPYLHQNSHNAPAELQGIPRYHSQSPSMCDRKEFVFSFN 349

Query: 397 PHQQYSLPSKSSKWDFEEEMTYLGLDHC 424
                S+ S      + +++TY  +  C
Sbjct: 350 AMASSSMHSAGGGSYYHQQVTYQDIKPC 377


>gi|161169017 neuron navigator 2 isoform 4 [Homo sapiens]
          Length = 1493

 Score = 29.3 bits (64), Expect = 7.3
 Identities = 19/58 (32%), Positives = 28/58 (48%)

Query: 277 GDLLPPSASGVYSDHGDLQAWSKNAALGRNHLADNCYSNYPFPLTSWPCSFSPSQNSS 334
           G+L  PS SGV S       +SKN  L ++ LA +  S +  P  S     + S +S+
Sbjct: 422 GNLDSPSGSGVLSSGSSSPLYSKNVDLNQSPLASSPSSAHSAPSNSLTWGTNASSSSA 479


>gi|161169015 neuron navigator 2 isoform 3 [Homo sapiens]
          Length = 2365

 Score = 29.3 bits (64), Expect = 7.3
 Identities = 19/58 (32%), Positives = 28/58 (48%)

Query: 277  GDLLPPSASGVYSDHGDLQAWSKNAALGRNHLADNCYSNYPFPLTSWPCSFSPSQNSS 334
            G+L  PS SGV S       +SKN  L ++ LA +  S +  P  S     + S +S+
Sbjct: 1272 GNLDSPSGSGVLSSGSSSPLYSKNVDLNQSPLASSPSSAHSAPSNSLTWGTNASSSSA 1329


>gi|161169013 neuron navigator 2 isoform 1 [Homo sapiens]
          Length = 2432

 Score = 29.3 bits (64), Expect = 7.3
 Identities = 19/58 (32%), Positives = 28/58 (48%)

Query: 277  GDLLPPSASGVYSDHGDLQAWSKNAALGRNHLADNCYSNYPFPLTSWPCSFSPSQNSS 334
            G+L  PS SGV S       +SKN  L ++ LA +  S +  P  S     + S +S+
Sbjct: 1336 GNLDSPSGSGVLSSGSSSPLYSKNVDLNQSPLASSPSSAHSAPSNSLTWGTNASSSSA 1393


>gi|38044282 neuron navigator 2 isoform 2 [Homo sapiens]
          Length = 2429

 Score = 29.3 bits (64), Expect = 7.3
 Identities = 19/58 (32%), Positives = 28/58 (48%)

Query: 277  GDLLPPSASGVYSDHGDLQAWSKNAALGRNHLADNCYSNYPFPLTSWPCSFSPSQNSS 334
            G+L  PS SGV S       +SKN  L ++ LA +  S +  P  S     + S +S+
Sbjct: 1336 GNLDSPSGSGVLSSGSSSPLYSKNVDLNQSPLASSPSSAHSAPSNSLTWGTNASSSSA 1393


>gi|30794216 tripartite motif-containing 56 [Homo sapiens]
          Length = 755

 Score = 29.3 bits (64), Expect = 7.3
 Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 7/62 (11%)

Query: 182 SLKGSTETRSLPGETQSQGSLPLTWSFQEGVQLPGSYSGHLIANTPQQNSLNDCFSFSKS 241
           +++GS  TR +PG   S+G   L       V L  S  GH + +  QQNS+  C    + 
Sbjct: 615 NMEGSLATRFIPGGKASRGLRAL-------VFLTTSPQGHFVGSDWQQNSVVICDGLGQV 667

Query: 242 YG 243
            G
Sbjct: 668 VG 669


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.315    0.132    0.419 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,183,381
Number of Sequences: 37866
Number of extensions: 1050296
Number of successful extensions: 2462
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 2451
Number of HSP's gapped (non-prelim): 37
length of query: 436
length of database: 18,247,518
effective HSP length: 105
effective length of query: 331
effective length of database: 14,271,588
effective search space: 4723895628
effective search space used: 4723895628
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.