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Search of human proteins with 4507545
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4507545 G protein-coupled receptor 137B [Homo sapiens]
(399 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4507545 G protein-coupled receptor 137B [Homo sapiens] 819 0.0
gi|21361825 G protein-coupled receptor 137 [Homo sapiens] 363 e-100
gi|153792393 G protein-coupled receptor 137C [Homo sapiens] 317 2e-86
gi|46560555 transmembrane protein 132E [Homo sapiens] 40 0.003
gi|50054481 olfactory receptor, family 52, subfamily N, member 5... 37 0.041
gi|195972795 chemokine (C-C motif) receptor-like 2 isoform 2 [Ho... 35 0.12
gi|68215224 chemokine (C-C motif) receptor-like 2 isoform 1 [Hom... 35 0.12
gi|215422370 solute carrier family 10, member 3 isoform 1 [Homo ... 35 0.12
gi|215422368 solute carrier family 10, member 3 isoform 2 [Homo ... 35 0.12
gi|9790143 solute carrier family 10, member 3 isoform 1 [Homo sa... 35 0.12
gi|66932941 XC chemokine receptor 1 [Homo sapiens] 33 0.45
gi|4885339 XC chemokine receptor 1 [Homo sapiens] 33 0.45
gi|123701900 solute carrier family 12 (potassium/chloride transp... 33 0.59
gi|47132519 Ras association and pleckstrin homology domains 1 is... 32 0.78
gi|156071470 hyperpolarization activated cyclic nucleotide-gated... 32 1.3
gi|116284392 mucin 2 precursor [Homo sapiens] 32 1.3
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin... 32 1.3
gi|52353268 olfactory receptor, family 52, subfamily N, member 2... 32 1.3
gi|154689780 son of sevenless homolog 2 [Homo sapiens] 31 1.7
gi|110832843 TBP-associated factor 4 [Homo sapiens] 31 1.7
gi|5032169 telomeric repeat binding factor 2 [Homo sapiens] 31 1.7
gi|149999365 matrix metalloproteinase 16 isoform 2 preproprotein... 31 1.7
gi|13027802 matrix metalloproteinase 16 isoform 1 preproprotein ... 31 1.7
gi|65301135 polymerase (RNA) III (DNA directed) polypeptide H (2... 31 2.3
gi|65301161 polymerase (RNA) III (DNA directed) polypeptide H (2... 31 2.3
gi|24475814 polymerase (RNA) III (DNA directed) polypeptide H (2... 31 2.3
gi|42741675 PDZ and LIM domain 7 isoform 2 [Homo sapiens] 31 2.3
gi|11496885 PDZ and LIM domain 7 isoform 1 [Homo sapiens] 31 2.3
gi|52138513 SIN3 homolog B, transcription regulator [Homo sapiens] 31 2.3
gi|41349454 proline arginine-rich end leucine-rich repeat protei... 31 2.3
>gi|4507545 G protein-coupled receptor 137B [Homo sapiens]
Length = 399
Score = 819 bits (2115), Expect = 0.0
Identities = 399/399 (100%), Positives = 399/399 (100%)
Query: 1 MRPERPRPRGSAPGPMETPPWDPARNDSLPPTLTPAVPPYVKLGLTVVYTVFYALLFVFI 60
MRPERPRPRGSAPGPMETPPWDPARNDSLPPTLTPAVPPYVKLGLTVVYTVFYALLFVFI
Sbjct: 1 MRPERPRPRGSAPGPMETPPWDPARNDSLPPTLTPAVPPYVKLGLTVVYTVFYALLFVFI 60
Query: 61 YVQLWLVLRYRHKRLSYQSVFLFLCLFWASLRTVLFSFYFKDFVAANSLSPFVFWLLYCF 120
YVQLWLVLRYRHKRLSYQSVFLFLCLFWASLRTVLFSFYFKDFVAANSLSPFVFWLLYCF
Sbjct: 61 YVQLWLVLRYRHKRLSYQSVFLFLCLFWASLRTVLFSFYFKDFVAANSLSPFVFWLLYCF 120
Query: 121 PVCLQFFTLTLMNLYFTQVIFKAKSKYSPELLKYRLPLYLASLFISLVFLLVNLTCAVLV 180
PVCLQFFTLTLMNLYFTQVIFKAKSKYSPELLKYRLPLYLASLFISLVFLLVNLTCAVLV
Sbjct: 121 PVCLQFFTLTLMNLYFTQVIFKAKSKYSPELLKYRLPLYLASLFISLVFLLVNLTCAVLV 180
Query: 181 KTGNWERKVIVSVRVAINDTLFVLCAVSLSICLYKISKMSLANIYLESKGSSVCQVTAIG 240
KTGNWERKVIVSVRVAINDTLFVLCAVSLSICLYKISKMSLANIYLESKGSSVCQVTAIG
Sbjct: 181 KTGNWERKVIVSVRVAINDTLFVLCAVSLSICLYKISKMSLANIYLESKGSSVCQVTAIG 240
Query: 241 VTVILLYTSRACYNLFILSFSQNKSVHSFDYDWYNVSDQADLKNQLGDAGYVLFGVVLFV 300
VTVILLYTSRACYNLFILSFSQNKSVHSFDYDWYNVSDQADLKNQLGDAGYVLFGVVLFV
Sbjct: 241 VTVILLYTSRACYNLFILSFSQNKSVHSFDYDWYNVSDQADLKNQLGDAGYVLFGVVLFV 300
Query: 301 WELLPTTLVVYFFRVRNPTKDLTNPGMVPSHGFSPRSYFFDNPRRYDSDDDLAWNIAPQG 360
WELLPTTLVVYFFRVRNPTKDLTNPGMVPSHGFSPRSYFFDNPRRYDSDDDLAWNIAPQG
Sbjct: 301 WELLPTTLVVYFFRVRNPTKDLTNPGMVPSHGFSPRSYFFDNPRRYDSDDDLAWNIAPQG 360
Query: 361 LQGGFAPDYYDWGQQTNSFLAQAGTLQDSTLDPDKPSLG 399
LQGGFAPDYYDWGQQTNSFLAQAGTLQDSTLDPDKPSLG
Sbjct: 361 LQGGFAPDYYDWGQQTNSFLAQAGTLQDSTLDPDKPSLG 399
>gi|21361825 G protein-coupled receptor 137 [Homo sapiens]
Length = 417
Score = 363 bits (931), Expect = e-100
Identities = 182/323 (56%), Positives = 231/323 (71%), Gaps = 2/323 (0%)
Query: 33 LTPAVPPYVKLGLTVVYTVFYALLFVFIYVQLWLVLRYRHKRLSYQSVFLFLCLFWASLR 92
L PA+PP V LGLT YT YALLF +Y QLWLVL Y HKRLSYQ+VFL LCL WA+LR
Sbjct: 14 LVPALPPAVTLGLTAAYTTLYALLFFSVYAQLWLVLLYGHKRLSYQTVFLALCLLWAALR 73
Query: 93 TVLFSFYFKDFVAANSLSPFVFWLLYCFPVCLQFFTLTLMNLYFTQVIFKAKSKYSPELL 152
T LFSFYF+D AN L P FWLLYC PVCLQFFTLTLMNLYF QV+FKAK K PE+
Sbjct: 74 TTLFSFYFRDTPRANRLGPLPFWLLYCCPVCLQFFTLTLMNLYFAQVVFKAKVKRRPEMS 133
Query: 153 KYRLPLYLASLFISLVFLLVNLTCAVLVKTGNWERKVIVSVRVAINDTLFVLCAVSLSIC 212
+ L + A + SL+FLLVN+ CAVL + ++ VRV ++D+LFV+CA+SL+ C
Sbjct: 134 RGLLAVRGAFVGASLLFLLVNVLCAVLSHRRRAQPWALLLVRVLVSDSLFVICALSLAAC 193
Query: 213 LYKISKMS-LANIYLESKGSSVCQVTAIGVTVILLYTSRACYNLFILSFSQNKSVHSFDY 271
L +++ + +IYLE+KG+SVCQ A+G ++LLY SRACYNL L+ + + +FDY
Sbjct: 194 LCLVARRAPSTSIYLEAKGTSVCQAAAMGGAMVLLYASRACYNLTALALAPQSRLDTFDY 253
Query: 272 DWYNVSDQADLKNQLGDAGYVLFGVVLFVWELLPTTLVVYFFRVRNPTKDLTNPGMVPSH 331
WYNVSDQADL N LG+ GY++FG++LFVWELLPTTL+V FFRV P +DL+ ++
Sbjct: 254 GWYNVSDQADLVNDLGNKGYLVFGLILFVWELLPTTLLVGFFRVHRPPQDLSTSHILNGQ 313
Query: 332 GFSPRSYFFDNPRRYDSDDDLAW 354
F+ RSYFFD + D+ +W
Sbjct: 314 VFASRSYFFDRAGHCE-DEGCSW 335
>gi|153792393 G protein-coupled receptor 137C [Homo sapiens]
Length = 429
Score = 317 bits (811), Expect = 2e-86
Identities = 175/363 (48%), Positives = 232/363 (63%), Gaps = 22/363 (6%)
Query: 9 RGSAPGPMETPPWDPARNDSLP-----------PTLTPAVPPYVKLGLTVVYTVFYALLF 57
R S PGP R S P AVP V+L L+V++ + YA LF
Sbjct: 2 RVSVPGPAAAAAPAAGREPSTPGGGSGGGGAVAAASGAAVPGSVQLALSVLHALLYAALF 61
Query: 58 VFIYVQLWLVLRYRHKRLSYQSVFLFLCLFWASLRTVLFSFYFKDFVAANSLSP------ 111
F Y+QLW +L YR +RLSYQS+ LFLCL WA+LRT LFS F + L P
Sbjct: 62 AFAYLQLWRLLLYRERRLSYQSLCLFLCLLWAALRTTLFSAAFSLSGSLPLLRPPAHLHF 121
Query: 112 FVFWLLYCFPVCLQFFTLTLMNLYFTQVIFKAKSKYSPELLKYRLPLYLASLFISLVFLL 171
F WLLYCFP CLQF TL L+NLY +VI K + + EL ++++ L+L + SL+FL+
Sbjct: 122 FPHWLLYCFPSCLQFSTLCLLNLYLAEVICKVRC--ATELDRHKILLHLGFIMASLLFLV 179
Query: 172 VNLTCAVLVKTGNWERKV--IVSVRVAINDTLFVLCAVSLSICLYKISKMSLANIYLESK 229
VNLTCA+LV E ++ V VR IND+LF+LCA+SL + KI+KMS AN+YLESK
Sbjct: 180 VNLTCAMLVHGDVPENQLKWTVFVRALINDSLFILCAISLVCYICKITKMSSANVYLESK 239
Query: 230 GSSVCQVTAIGVTVILLYTSRACYNLFILSFSQNKSVHSFDYDWYNVSDQADLKNQLGDA 289
G S+CQ +G VILLY+SRACYNL +++ SQ+ F+Y W N+SD+A +++ G+
Sbjct: 240 GMSLCQTVVVGSVVILLYSSRACYNLVVVTISQDTLESPFNYGWDNLSDKAHVEDISGEE 299
Query: 290 GYVLFGVVLFVWELLPTTLVVYFFRVRNPTKDLTNPGMVPSHGFSPRSYFFDNPRRYDSD 349
Y++FG+VLF+WE +P VV FFR + ++L GM+ SH +S R+YFFDNPRRYDSD
Sbjct: 300 -YIVFGMVLFLWEHVPAWSVVLFFRAQRLNQNLAPAGMINSHSYSSRAYFFDNPRRYDSD 358
Query: 350 DDL 352
DDL
Sbjct: 359 DDL 361
>gi|46560555 transmembrane protein 132E [Homo sapiens]
Length = 984
Score = 40.4 bits (93), Expect = 0.003
Identities = 28/77 (36%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Query: 3 PERPRPRGSAPGPMETPPWDPARNDSLP-PTLTPAVP---PYVKLGLTVVYTVFYALLFV 58
P P APGP P P D LP PT VP +++G+ + VF + V
Sbjct: 755 PGSALPAPEAPGPGTASPVVPPTEDFLPLPTGFLQVPRGLTDLEIGMYALLGVFCLAILV 814
Query: 59 FIYVQLWLVLRYRHKRL 75
F+ + VLRYRHKR+
Sbjct: 815 FLINCIVFVLRYRHKRI 831
>gi|50054481 olfactory receptor, family 52, subfamily N, member 5
[Homo sapiens]
Length = 324
Score = 36.6 bits (83), Expect = 0.041
Identities = 50/187 (26%), Positives = 82/187 (43%), Gaps = 41/187 (21%)
Query: 84 LCLFWASLRTVLFS------FYFKDFVAANS----LSPFVFWLLYCFPVCLQFFTLTLMN 133
LC+FW SL+ + F+ F+ F S L ++ C+P+ + TL N
Sbjct: 91 LCIFWFSLKEINFNACLAQMFFVHGFTGVESGVLMLMALDRYIAICYPLR---YATTLTN 147
Query: 134 LYFTQVIFKAKSKYS----------PELLKYRLPLYLASLFISLVFL----LVNLTCAVL 179
+I KA+ P L+K RLP + S IS + +V L+CA +
Sbjct: 148 ----PIIAKAELATFLRGVLLMIPFPFLVK-RLP-FCQSNIISHTYCDHMSVVKLSCASI 201
Query: 180 VKTGNWERKVIVSVRVAINDTLFVLCAVSLSICLYKISKMSLANIYLESKGSSVC--QVT 237
+ VI + VA+ +F +C +SLS L + +SL++ K S C ++
Sbjct: 202 ------KVNVIYGLMVALLIGVFDICCISLSYTLILKAAISLSSSDARQKAFSTCTAHIS 255
Query: 238 AIGVTVI 244
AI +T +
Sbjct: 256 AIIITYV 262
>gi|195972795 chemokine (C-C motif) receptor-like 2 isoform 2 [Homo
sapiens]
Length = 356
Score = 35.0 bits (79), Expect = 0.12
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Query: 40 YVKLGLTVVYTVFYALLFVFIYVQLWLVLRYRHKRLS-YQSVFLFLCLF---WASLRTVL 95
++ L + + V +F F+YVQ+ LR+R +R S ++ VF + +F WA
Sbjct: 211 FLTLKMNISVLVLPLFIFTFLYVQMRKTLRFREQRYSLFKLVFAIMVVFLLMWAPYNIAF 270
Query: 96 FSFYFKD 102
F FK+
Sbjct: 271 FLSTFKE 277
>gi|68215224 chemokine (C-C motif) receptor-like 2 isoform 1 [Homo
sapiens]
Length = 344
Score = 35.0 bits (79), Expect = 0.12
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Query: 40 YVKLGLTVVYTVFYALLFVFIYVQLWLVLRYRHKRLS-YQSVFLFLCLF---WASLRTVL 95
++ L + + V +F F+YVQ+ LR+R +R S ++ VF + +F WA
Sbjct: 199 FLTLKMNISVLVLPLFIFTFLYVQMRKTLRFREQRYSLFKLVFAIMVVFLLMWAPYNIAF 258
Query: 96 FSFYFKD 102
F FK+
Sbjct: 259 FLSTFKE 265
>gi|215422370 solute carrier family 10, member 3 isoform 1 [Homo
sapiens]
Length = 477
Score = 35.0 bits (79), Expect = 0.12
Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
Query: 155 RLPLYLASLFISLVFLLVNLTCAVLVKTGNWERKVIVSVRVAINDTLFVLCAVSLSICLY 214
RLP+ L + + LV LLV A +K +R+ VS+ V + ++L L + LS+
Sbjct: 382 RLPIVLVGITVPLVGLLVGYCLATCLKLPVAQRRT-VSIEVGVQNSLLALAMLQLSLRRL 440
Query: 215 KISKMSLANIYLESKGSSVCQVTAIG 240
+ S A + G+S IG
Sbjct: 441 QADYASQAPFIVALSGTSEMLALVIG 466
>gi|215422368 solute carrier family 10, member 3 isoform 2 [Homo
sapiens]
Length = 448
Score = 35.0 bits (79), Expect = 0.12
Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
Query: 155 RLPLYLASLFISLVFLLVNLTCAVLVKTGNWERKVIVSVRVAINDTLFVLCAVSLSICLY 214
RLP+ L + + LV LLV A +K +R+ VS+ V + ++L L + LS+
Sbjct: 353 RLPIVLVGITVPLVGLLVGYCLATCLKLPVAQRRT-VSIEVGVQNSLLALAMLQLSLRRL 411
Query: 215 KISKMSLANIYLESKGSSVCQVTAIG 240
+ S A + G+S IG
Sbjct: 412 QADYASQAPFIVALSGTSEMLALVIG 437
>gi|9790143 solute carrier family 10, member 3 isoform 1 [Homo
sapiens]
Length = 477
Score = 35.0 bits (79), Expect = 0.12
Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
Query: 155 RLPLYLASLFISLVFLLVNLTCAVLVKTGNWERKVIVSVRVAINDTLFVLCAVSLSICLY 214
RLP+ L + + LV LLV A +K +R+ VS+ V + ++L L + LS+
Sbjct: 382 RLPIVLVGITVPLVGLLVGYCLATCLKLPVAQRRT-VSIEVGVQNSLLALAMLQLSLRRL 440
Query: 215 KISKMSLANIYLESKGSSVCQVTAIG 240
+ S A + G+S IG
Sbjct: 441 QADYASQAPFIVALSGTSEMLALVIG 466
>gi|66932941 XC chemokine receptor 1 [Homo sapiens]
Length = 333
Score = 33.1 bits (74), Expect = 0.45
Identities = 47/189 (24%), Positives = 75/189 (39%), Gaps = 32/189 (16%)
Query: 40 YVKLGLTVVYTVFYALLFVFIYVQLWLVLRYRHKRLSYQSVFLFLC---LFWASLRTVLF 96
+ L TV+Y + + L V + LW++++Y L LC L +A L V
Sbjct: 29 FATLATTVLYCLVFLLSLVGNSLVLWVLVKYESLESLTNIFILNLCLSDLVFACLLPVWI 88
Query: 97 SFYFKDFVAANSLSPFVFWLLYCFPVCLQFFTLTLMNLYFTQVIFKAKSKYSPELLKYRL 156
S Y +V + L + +++ + F LT+M ++ + S SP L R+
Sbjct: 89 SPYHWGWVLGDFLCKLLN-MIFSISLYSSIFFLTIMTIH------RYLSVVSP-LSTLRV 140
Query: 157 PLYLASLFISLVFLLVNLTCAVLVKTGNWERKVIVSVRVAINDTLFVLCAVSLSICLYKI 216
P L C VLV W + S+ +I DT+F V S C Y
Sbjct: 141 P---------------TLRCRVLVTMAVW----VASILSSILDTIF--HKVLSSGCDYSE 179
Query: 217 SKMSLANIY 225
L ++Y
Sbjct: 180 LTWYLTSVY 188
>gi|4885339 XC chemokine receptor 1 [Homo sapiens]
Length = 333
Score = 33.1 bits (74), Expect = 0.45
Identities = 47/189 (24%), Positives = 75/189 (39%), Gaps = 32/189 (16%)
Query: 40 YVKLGLTVVYTVFYALLFVFIYVQLWLVLRYRHKRLSYQSVFLFLC---LFWASLRTVLF 96
+ L TV+Y + + L V + LW++++Y L LC L +A L V
Sbjct: 29 FATLATTVLYCLVFLLSLVGNSLVLWVLVKYESLESLTNIFILNLCLSDLVFACLLPVWI 88
Query: 97 SFYFKDFVAANSLSPFVFWLLYCFPVCLQFFTLTLMNLYFTQVIFKAKSKYSPELLKYRL 156
S Y +V + L + +++ + F LT+M ++ + S SP L R+
Sbjct: 89 SPYHWGWVLGDFLCKLLN-MIFSISLYSSIFFLTIMTIH------RYLSVVSP-LSTLRV 140
Query: 157 PLYLASLFISLVFLLVNLTCAVLVKTGNWERKVIVSVRVAINDTLFVLCAVSLSICLYKI 216
P L C VLV W + S+ +I DT+F V S C Y
Sbjct: 141 P---------------TLRCRVLVTMAVW----VASILSSILDTIF--HKVLSSGCDYSE 179
Query: 217 SKMSLANIY 225
L ++Y
Sbjct: 180 LTWYLTSVY 188
>gi|123701900 solute carrier family 12 (potassium/chloride
transporters), member 7 [Homo sapiens]
Length = 1083
Score = 32.7 bits (73), Expect = 0.59
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 8/79 (10%)
Query: 160 LASLFISLVFLLVNLTCAV--LVKTGNWERKVIVSVRVAINDTLFVLCAVSLSIC--LYK 215
+ S+F + +L VNL CAV L++T NW R ++ LC + IC Y
Sbjct: 580 ILSMFFLMCYLFVNLACAVQTLLRTPNW-RPRFKFYHWTLSFLGMSLCLALMFICSWYYA 638
Query: 216 ISKMSLANI---YLESKGS 231
+S M +A Y+E +G+
Sbjct: 639 LSAMLIAGCIYKYIEYRGA 657
>gi|47132519 Ras association and pleckstrin homology domains 1
isoform 1 [Homo sapiens]
Length = 1250
Score = 32.3 bits (72), Expect = 0.78
Identities = 15/37 (40%), Positives = 18/37 (48%)
Query: 6 PRPRGSAPGPMETPPWDPARNDSLPPTLTPAVPPYVK 42
P+P + P P T P + PPT TP VPP K
Sbjct: 779 PKPLVTIPAPTSTKTVAPVVTQAAPPTPTPPVPPAKK 815
>gi|156071470 hyperpolarization activated cyclic nucleotide-gated
potassium channel 2 [Homo sapiens]
Length = 889
Score = 31.6 bits (70), Expect = 1.3
Identities = 13/30 (43%), Positives = 16/30 (53%)
Query: 2 RPERPRPRGSAPGPMETPPWDPARNDSLPP 31
+P P P PGP PP P R ++LPP
Sbjct: 34 QPPPPPPPAPPPGPGPAPPQHPPRAEALPP 63
>gi|116284392 mucin 2 precursor [Homo sapiens]
Length = 5179
Score = 31.6 bits (70), Expect = 1.3
Identities = 14/34 (41%), Positives = 17/34 (50%)
Query: 6 PRPRGSAPGPMETPPWDPARNDSLPPTLTPAVPP 39
P P + P TP P +LPPT TP+ PP
Sbjct: 1533 PPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPP 1566
Score = 31.6 bits (70), Expect = 1.3
Identities = 14/34 (41%), Positives = 17/34 (50%)
Query: 6 PRPRGSAPGPMETPPWDPARNDSLPPTLTPAVPP 39
P P + P TP P +LPPT TP+ PP
Sbjct: 1612 PPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPP 1645
Score = 30.4 bits (67), Expect = 2.9
Identities = 14/33 (42%), Positives = 17/33 (51%)
Query: 6 PRPRGSAPGPMETPPWDPARNDSLPPTLTPAVP 38
P P + P TP PA +LPPT TP+ P
Sbjct: 1494 PPPTTTPSPPTTTPITPPASTTTLPPTTTPSPP 1526
>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
tract binding protein associated) [Homo sapiens]
Length = 707
Score = 31.6 bits (70), Expect = 1.3
Identities = 18/37 (48%), Positives = 18/37 (48%), Gaps = 3/37 (8%)
Query: 3 PERPRPRGSAPGPMETPPWDPARNDSLPPTLTPAVPP 39
P P GS PGP TPP PA S PP P PP
Sbjct: 137 PTSGAPPGSGPGPTPTPP--PAVT-SAPPGAPPPTPP 170
>gi|52353268 olfactory receptor, family 52, subfamily N, member 2
[Homo sapiens]
Length = 321
Score = 31.6 bits (70), Expect = 1.3
Identities = 34/183 (18%), Positives = 73/183 (39%), Gaps = 27/183 (14%)
Query: 84 LCLFWASLRTVLFSFYFKDFVAANSLSPFVFWLLYCFPVCLQFFTLTLMNLYFTQVIFKA 143
LC+FW +L+ + F+ + L+ +L + L + L + ++
Sbjct: 84 LCIFWFNLKEIDFNACLAQMFFVHMLTGMESGVLML--MALDRYVAICYPLRYATILT-- 139
Query: 144 KSKYSPELLKYRLPLYLASLFISLVFLLVNLTC-----------------AVLVKTGNWE 186
+P + K L +L ++ + + F L+ V GN++
Sbjct: 140 ----NPVIAKAGLATFLRNVMLIIPFTLLTKRLPYCRGNFIPHTYCDHMSVAKVSCGNFK 195
Query: 187 RKVIVSVRVAINDTLFVLCAVSLSICLYKISKMSLANIYLESKGSSVCQVTAIGVTVILL 246
I + VA+ +F +C +S+S + + MSL++ K S C T+ ++++
Sbjct: 196 VNAIYGLMVALLIGVFDICCISVSYTMILQAVMSLSSADARHKAFSTC--TSHMCSIVIT 253
Query: 247 YTS 249
Y +
Sbjct: 254 YVA 256
>gi|154689780 son of sevenless homolog 2 [Homo sapiens]
Length = 1332
Score = 31.2 bits (69), Expect = 1.7
Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Query: 1 MRPERPRPRGSAPGPMETPPWDPARNDSLPPTLTPAVP 38
++P P P G+ GP+ +PP P R D LP T P VP
Sbjct: 1185 VKPRVPVPTGAFDGPLHSPPPPPPR-DPLPDT-PPPVP 1220
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 31.2 bits (69), Expect = 1.7
Identities = 16/34 (47%), Positives = 17/34 (50%), Gaps = 4/34 (11%)
Query: 6 PRPRGSAPGPMETPPWDPARNDSLPPTLTPAVPP 39
P P AP + PP PA PPT PAVPP
Sbjct: 270 PPPPPPAPATLARPPGHPAG----PPTAAPAVPP 299
>gi|5032169 telomeric repeat binding factor 2 [Homo sapiens]
Length = 500
Score = 31.2 bits (69), Expect = 1.7
Identities = 13/21 (61%), Positives = 15/21 (71%)
Query: 12 APGPMETPPWDPARNDSLPPT 32
APGP+E PP +PAR PPT
Sbjct: 261 APGPVEKPPREPARQLRNPPT 281
>gi|149999365 matrix metalloproteinase 16 isoform 2 preproprotein
[Homo sapiens]
Length = 457
Score = 31.2 bits (69), Expect = 1.7
Identities = 34/120 (28%), Positives = 46/120 (38%), Gaps = 17/120 (14%)
Query: 3 PERPRPRGSAPGPMETPPWDPARND----SLPPTLTPAVP---PYVKLGLTVVYTVFYAL 55
P RP + P PP DP +ND PPT P+ P P + G +
Sbjct: 297 PPPTRPLPTVPPHRSIPPADPRKNDRPKPPRPPTGRPSYPGAKPNICDGNFNTLAILRRE 356
Query: 56 LFVFIYVQLWLVLRYRHKRLSYQSVFLFLCLFWASLRTVLFSFYFKDFVAANSLSPFVFW 115
+FVF W R R+ R+ + + FW L + D V NS FVF+
Sbjct: 357 MFVFKDQWFW---RVRNNRV-MDGYPMQITYFWRGLPPSI------DAVYENSDGNFVFF 406
>gi|13027802 matrix metalloproteinase 16 isoform 1 preproprotein
[Homo sapiens]
Length = 607
Score = 31.2 bits (69), Expect = 1.7
Identities = 34/120 (28%), Positives = 46/120 (38%), Gaps = 17/120 (14%)
Query: 3 PERPRPRGSAPGPMETPPWDPARND----SLPPTLTPAVP---PYVKLGLTVVYTVFYAL 55
P RP + P PP DP +ND PPT P+ P P + G +
Sbjct: 297 PPPTRPLPTVPPHRSIPPADPRKNDRPKPPRPPTGRPSYPGAKPNICDGNFNTLAILRRE 356
Query: 56 LFVFIYVQLWLVLRYRHKRLSYQSVFLFLCLFWASLRTVLFSFYFKDFVAANSLSPFVFW 115
+FVF W R R+ R+ + + FW L + D V NS FVF+
Sbjct: 357 MFVFKDQWFW---RVRNNRV-MDGYPMQITYFWRGLPPSI------DAVYENSDGNFVFF 406
>gi|65301135 polymerase (RNA) III (DNA directed) polypeptide H
(22.9kD) isoform b [Homo sapiens]
Length = 175
Score = 30.8 bits (68), Expect = 2.3
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Query: 168 VFLLVNLTCAVLVKTGNWERKVIVSVRVAINDTLF--VLCAVSLSICLYKISKMSLANIY 225
+F+LV + V + +ERK+ S+ +N L V+ V L ICL+ I+K+ A ++
Sbjct: 1 MFVLVEMVDTVRIPPWQFERKLNDSIAEELNKKLANKVVYNVGLCICLFDITKLEDAYVF 60
>gi|65301161 polymerase (RNA) III (DNA directed) polypeptide H
(22.9kD) isoform a [Homo sapiens]
Length = 204
Score = 30.8 bits (68), Expect = 2.3
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Query: 168 VFLLVNLTCAVLVKTGNWERKVIVSVRVAINDTLF--VLCAVSLSICLYKISKMSLANIY 225
+F+LV + V + +ERK+ S+ +N L V+ V L ICL+ I+K+ A ++
Sbjct: 1 MFVLVEMVDTVRIPPWQFERKLNDSIAEELNKKLANKVVYNVGLCICLFDITKLEDAYVF 60
>gi|24475814 polymerase (RNA) III (DNA directed) polypeptide H
(22.9kD) isoform a [Homo sapiens]
Length = 204
Score = 30.8 bits (68), Expect = 2.3
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Query: 168 VFLLVNLTCAVLVKTGNWERKVIVSVRVAINDTLF--VLCAVSLSICLYKISKMSLANIY 225
+F+LV + V + +ERK+ S+ +N L V+ V L ICL+ I+K+ A ++
Sbjct: 1 MFVLVEMVDTVRIPPWQFERKLNDSIAEELNKKLANKVVYNVGLCICLFDITKLEDAYVF 60
>gi|42741675 PDZ and LIM domain 7 isoform 2 [Homo sapiens]
Length = 423
Score = 30.8 bits (68), Expect = 2.3
Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Query: 3 PERPRPRGSAPGPMETPPW--DPARNDSLPPTLTPAV 37
P+ P P +AP P PPW DPA + P T V
Sbjct: 172 PQEPWPGPTAPSPTSRPPWAVDPAFAERYAPDKTSTV 208
>gi|11496885 PDZ and LIM domain 7 isoform 1 [Homo sapiens]
Length = 457
Score = 30.8 bits (68), Expect = 2.3
Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Query: 3 PERPRPRGSAPGPMETPPW--DPARNDSLPPTLTPAV 37
P+ P P +AP P PPW DPA + P T V
Sbjct: 206 PQEPWPGPTAPSPTSRPPWAVDPAFAERYAPDKTSTV 242
>gi|52138513 SIN3 homolog B, transcription regulator [Homo sapiens]
Length = 1162
Score = 30.8 bits (68), Expect = 2.3
Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Query: 4 ERPRPRGSAPGPMETPPWDPARNDSLPPTLTPAVPPYV-KLGLTVVYTVFYALLFVFIYV 62
ER +P APGP +PP + P T P +PP L VY++F+A + ++
Sbjct: 729 ERKKP---APGPHSSPPEEKGAFGDAPATEQPPLPPPAPHKPLDDVYSLFFANNNWYFFL 785
Query: 63 QLWLVLRYRHKRLSYQS 79
+L L R ++ Q+
Sbjct: 786 RLHQTLCSRLLKIYRQA 802
>gi|41349454 proline arginine-rich end leucine-rich repeat protein
precursor [Homo sapiens]
Length = 382
Score = 30.8 bits (68), Expect = 2.3
Identities = 17/37 (45%), Positives = 18/37 (48%), Gaps = 3/37 (8%)
Query: 2 RPERPRPRGSAPGPMETPPWDPARNDSLPPTLTPAVP 38
R RPRPR P P P +PA LPP L P P
Sbjct: 34 RRPRPRPR---PTPSFPQPDEPAEPTDLPPPLPPGPP 67
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.327 0.141 0.452
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,977,172
Number of Sequences: 37866
Number of extensions: 754383
Number of successful extensions: 4520
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 52
Number of HSP's that attempted gapping in prelim test: 4376
Number of HSP's gapped (non-prelim): 180
length of query: 399
length of database: 18,247,518
effective HSP length: 104
effective length of query: 295
effective length of database: 14,309,454
effective search space: 4221288930
effective search space used: 4221288930
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.