Guide to the Human Genome
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Name: POLR3H Sequence: fasta or formatted (204aa) NCBI GI: 24475814
Description:

polymerase (RNA) III (DNA directed) polypeptide H (22.9kD) isoform a

Referenced in:

RNA Polymerase and General Transcription Factors

Other entries for this name:
alt prot [175aa] polymerase (RNA) III (DNA directed) polypeptide H (22.9kD) isoform b
alt mRNA [204aa] polymerase (RNA) III (DNA directed) polypeptide H (22.9kD) isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.9         10           1
 C cysteine            2.0          4           1
 D aspartate           6.9         14           2
 E glutamate          10.3         21           2
 F phenylalanine       5.9         12           2
 G glycine             6.4         13           1
 H histidine           2.5          5           1
 I isoleucine          5.4         11           1
 K lysine              5.4         11           2
 L leucine             8.8         18           2
 M methionine          1.5          3           1
 N asparagine          2.5          5           1
 P proline             6.4         13           2
 Q glutamine           2.0          4           2
 R arginine            2.5          5           1
 S serine              7.4         15           2
 T threonine           5.4         11           2
 V valine              9.3         19           2
 W tryptophan          2.5          5           2
 Y tyrosine            2.5          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   polymerase (RNA) III (DNA directed) polypeptide H (2... 
POLR3H                1.000   polymerase (RNA) III (DNA directed) polypeptide H (2...
POLR3H                0.804   polymerase (RNA) III (DNA directed) polypeptide H (2...
POLR2G                0.033   DNA directed RNA polymerase II polypeptide G 
LOC285556             0.015   PREDICTED: hypothetical protein LOC285556 
LOC285556             0.015   PREDICTED: hypothetical protein LOC285556 
LOC285556             0.015   PREDICTED: hypothetical protein LOC285556 
GPR137B               0.015   G protein-coupled receptor 137B 
ERN2                  0.013   endoplasmic reticulum to nucleus signalling 2 [Homo...
BRPF3                 0.010   bromodomain and PHD finger containing, 3 
INPP5A                0.008   inositol polyphosphate-5-phosphatase A 
BMS1                  0.008   BMS1-like, ribosome assembly protein 
PRDM6                 0.008   PR domain containing 6 
RUNDC3A               0.008   RUN domain containing 3A isoform 1 
RUNDC3A               0.008   RUN domain containing 3A isoform 2 
TDRD1                 0.005   tudor domain containing 1 
ADPGK                 0.005   ADP-dependent glucokinase 
ZC3HAV1               0.005   zinc finger antiviral protein isoform 1 
ZC3HAV1               0.005   zinc finger antiviral protein isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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