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Search of human proteins with 4507441
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4507441 transcription factor AP-2 alpha isoform a [Homo
sapiens]
(437 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4507441 transcription factor AP-2 alpha isoform a [Homo sapiens] 900 0.0
gi|109389358 transcription factor AP-2 alpha isoform c [Homo sap... 870 0.0
gi|73760407 transcription factor AP-2 alpha isoform b [Homo sapi... 867 0.0
gi|118582289 transcription factor AP-2 beta [Homo sapiens] 613 e-175
gi|4507445 transcription factor AP-2 gamma [Homo sapiens] 534 e-152
gi|194353976 transcription factor AP-2 epsilon (activating enhan... 481 e-136
gi|151301211 transcription factor AP-2 beta-like 1 [Homo sapiens] 355 3e-98
gi|124378039 SEC16 homolog A [Homo sapiens] 40 0.004
gi|47578107 delangin isoform B [Homo sapiens] 39 0.007
gi|47578105 delangin isoform A [Homo sapiens] 39 0.007
gi|57863314 vacuolar protein sorting 37C [Homo sapiens] 39 0.009
gi|21314684 single stranded DNA binding protein 3 isoform b [Hom... 39 0.012
gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens] 38 0.016
gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens] 38 0.016
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 38 0.021
gi|57165375 glutamate receptor, ionotropic, N-methyl D-aspartate... 37 0.027
gi|57165373 glutamate receptor, ionotropic, N-methyl D-aspartate... 37 0.027
gi|112382226 atrophin-1 like protein isoform b [Homo sapiens] 37 0.027
gi|112382224 atrophin-1 like protein isoform a [Homo sapiens] 37 0.027
gi|112382216 atrophin-1 like protein isoform a [Homo sapiens] 37 0.027
gi|119226260 calcium homeostasis endoplasmic reticulum protein [... 37 0.035
gi|162951884 R3H domain containing 2 [Homo sapiens] 37 0.046
gi|19718731 bromodomain-containing protein 4 isoform long [Homo ... 36 0.079
gi|151301053 RNA binding motif protein 33 [Homo sapiens] 36 0.079
gi|16418447 cysteine and tyrosine-rich 1 protein precursor [Homo... 36 0.079
gi|238859557 regulatory factor X1 [Homo sapiens] 35 0.10
gi|239745813 PREDICTED: hypothetical protein XP_002343595 [Homo ... 35 0.10
gi|239757254 PREDICTED: hypothetical protein [Homo sapiens] 35 0.13
gi|239755981 PREDICTED: hypothetical protein XP_002344766 [Homo ... 35 0.13
gi|239750506 PREDICTED: hypothetical protein XP_002347417 [Homo ... 35 0.13
>gi|4507441 transcription factor AP-2 alpha isoform a [Homo sapiens]
Length = 437
Score = 900 bits (2327), Expect = 0.0
Identities = 437/437 (100%), Positives = 437/437 (100%)
Query: 1 MLWKLTDNIKYEDCEDRHDGTSNGTARLPQLGTVGQSPYTSAPPLSHTPNADFQPPYFPP 60
MLWKLTDNIKYEDCEDRHDGTSNGTARLPQLGTVGQSPYTSAPPLSHTPNADFQPPYFPP
Sbjct: 1 MLWKLTDNIKYEDCEDRHDGTSNGTARLPQLGTVGQSPYTSAPPLSHTPNADFQPPYFPP 60
Query: 61 PYQPIYPQSQDPYSHVNDPYSLNPLHAQPQPQHPGWPGQRQSQESGLLHTHRGLPHQLSG 120
PYQPIYPQSQDPYSHVNDPYSLNPLHAQPQPQHPGWPGQRQSQESGLLHTHRGLPHQLSG
Sbjct: 61 PYQPIYPQSQDPYSHVNDPYSLNPLHAQPQPQHPGWPGQRQSQESGLLHTHRGLPHQLSG 120
Query: 121 LDPRRDYRRHEDLLHGPHALSSGLGDLSIHSLPHAIEEVPHVEDPGINIPDQTVIKKGPV 180
LDPRRDYRRHEDLLHGPHALSSGLGDLSIHSLPHAIEEVPHVEDPGINIPDQTVIKKGPV
Sbjct: 121 LDPRRDYRRHEDLLHGPHALSSGLGDLSIHSLPHAIEEVPHVEDPGINIPDQTVIKKGPV 180
Query: 181 SLSKSNSNAVSAIPINKDNLFGGVVNPNEVFCSVPGRLSLLSSTSKYKVTVAEVQRRLSP 240
SLSKSNSNAVSAIPINKDNLFGGVVNPNEVFCSVPGRLSLLSSTSKYKVTVAEVQRRLSP
Sbjct: 181 SLSKSNSNAVSAIPINKDNLFGGVVNPNEVFCSVPGRLSLLSSTSKYKVTVAEVQRRLSP 240
Query: 241 PECLNASLLGGVLRRAKSKNGGRSLREKLDKIGLNLPAGRRKAANVTLLTSLVEGEAVHL 300
PECLNASLLGGVLRRAKSKNGGRSLREKLDKIGLNLPAGRRKAANVTLLTSLVEGEAVHL
Sbjct: 241 PECLNASLLGGVLRRAKSKNGGRSLREKLDKIGLNLPAGRRKAANVTLLTSLVEGEAVHL 300
Query: 301 ARDFGYVCETEFPAKAVAEFLNRQHSDPNEQVTRKNMLLATKQICKEFTDLLAQDRSPLG 360
ARDFGYVCETEFPAKAVAEFLNRQHSDPNEQVTRKNMLLATKQICKEFTDLLAQDRSPLG
Sbjct: 301 ARDFGYVCETEFPAKAVAEFLNRQHSDPNEQVTRKNMLLATKQICKEFTDLLAQDRSPLG 360
Query: 361 NSRPNPILEPGIQSCLTHFNLISHGFGSPAVCAAVTALQNYLTEALKAMDKMYLSNNPNS 420
NSRPNPILEPGIQSCLTHFNLISHGFGSPAVCAAVTALQNYLTEALKAMDKMYLSNNPNS
Sbjct: 361 NSRPNPILEPGIQSCLTHFNLISHGFGSPAVCAAVTALQNYLTEALKAMDKMYLSNNPNS 420
Query: 421 HTDNNAKSSDKEEKHRK 437
HTDNNAKSSDKEEKHRK
Sbjct: 421 HTDNNAKSSDKEEKHRK 437
>gi|109389358 transcription factor AP-2 alpha isoform c [Homo
sapiens]
Length = 433
Score = 870 bits (2248), Expect = 0.0
Identities = 424/428 (99%), Positives = 425/428 (99%)
Query: 10 KYEDCEDRHDGTSNGTARLPQLGTVGQSPYTSAPPLSHTPNADFQPPYFPPPYQPIYPQS 69
K D +DRHDGTSNGTARLPQLGTVGQSPYTSAPPLSHTPNADFQPPYFPPPYQPIYPQS
Sbjct: 6 KMGDWQDRHDGTSNGTARLPQLGTVGQSPYTSAPPLSHTPNADFQPPYFPPPYQPIYPQS 65
Query: 70 QDPYSHVNDPYSLNPLHAQPQPQHPGWPGQRQSQESGLLHTHRGLPHQLSGLDPRRDYRR 129
QDPYSHVNDPYSLNPLHAQPQPQHPGWPGQRQSQESGLLHTHRGLPHQLSGLDPRRDYRR
Sbjct: 66 QDPYSHVNDPYSLNPLHAQPQPQHPGWPGQRQSQESGLLHTHRGLPHQLSGLDPRRDYRR 125
Query: 130 HEDLLHGPHALSSGLGDLSIHSLPHAIEEVPHVEDPGINIPDQTVIKKGPVSLSKSNSNA 189
HEDLLHGPHALSSGLGDLSIHSLPHAIEEVPHVEDPGINIPDQTVIKKGPVSLSKSNSNA
Sbjct: 126 HEDLLHGPHALSSGLGDLSIHSLPHAIEEVPHVEDPGINIPDQTVIKKGPVSLSKSNSNA 185
Query: 190 VSAIPINKDNLFGGVVNPNEVFCSVPGRLSLLSSTSKYKVTVAEVQRRLSPPECLNASLL 249
VSAIPINKDNLFGGVVNPNEVFCSVPGRLSLLSSTSKYKVTVAEVQRRLSPPECLNASLL
Sbjct: 186 VSAIPINKDNLFGGVVNPNEVFCSVPGRLSLLSSTSKYKVTVAEVQRRLSPPECLNASLL 245
Query: 250 GGVLRRAKSKNGGRSLREKLDKIGLNLPAGRRKAANVTLLTSLVEGEAVHLARDFGYVCE 309
GGVLRRAKSKNGGRSLREKLDKIGLNLPAGRRKAANVTLLTSLVEGEAVHLARDFGYVCE
Sbjct: 246 GGVLRRAKSKNGGRSLREKLDKIGLNLPAGRRKAANVTLLTSLVEGEAVHLARDFGYVCE 305
Query: 310 TEFPAKAVAEFLNRQHSDPNEQVTRKNMLLATKQICKEFTDLLAQDRSPLGNSRPNPILE 369
TEFPAKAVAEFLNRQHSDPNEQVTRKNMLLATKQICKEFTDLLAQDRSPLGNSRPNPILE
Sbjct: 306 TEFPAKAVAEFLNRQHSDPNEQVTRKNMLLATKQICKEFTDLLAQDRSPLGNSRPNPILE 365
Query: 370 PGIQSCLTHFNLISHGFGSPAVCAAVTALQNYLTEALKAMDKMYLSNNPNSHTDNNAKSS 429
PGIQSCLTHFNLISHGFGSPAVCAAVTALQNYLTEALKAMDKMYLSNNPNSHTDNNAKSS
Sbjct: 366 PGIQSCLTHFNLISHGFGSPAVCAAVTALQNYLTEALKAMDKMYLSNNPNSHTDNNAKSS 425
Query: 430 DKEEKHRK 437
DKEEKHRK
Sbjct: 426 DKEEKHRK 433
>gi|73760407 transcription factor AP-2 alpha isoform b [Homo
sapiens]
Length = 431
Score = 867 bits (2240), Expect = 0.0
Identities = 422/422 (100%), Positives = 422/422 (100%)
Query: 16 DRHDGTSNGTARLPQLGTVGQSPYTSAPPLSHTPNADFQPPYFPPPYQPIYPQSQDPYSH 75
DRHDGTSNGTARLPQLGTVGQSPYTSAPPLSHTPNADFQPPYFPPPYQPIYPQSQDPYSH
Sbjct: 10 DRHDGTSNGTARLPQLGTVGQSPYTSAPPLSHTPNADFQPPYFPPPYQPIYPQSQDPYSH 69
Query: 76 VNDPYSLNPLHAQPQPQHPGWPGQRQSQESGLLHTHRGLPHQLSGLDPRRDYRRHEDLLH 135
VNDPYSLNPLHAQPQPQHPGWPGQRQSQESGLLHTHRGLPHQLSGLDPRRDYRRHEDLLH
Sbjct: 70 VNDPYSLNPLHAQPQPQHPGWPGQRQSQESGLLHTHRGLPHQLSGLDPRRDYRRHEDLLH 129
Query: 136 GPHALSSGLGDLSIHSLPHAIEEVPHVEDPGINIPDQTVIKKGPVSLSKSNSNAVSAIPI 195
GPHALSSGLGDLSIHSLPHAIEEVPHVEDPGINIPDQTVIKKGPVSLSKSNSNAVSAIPI
Sbjct: 130 GPHALSSGLGDLSIHSLPHAIEEVPHVEDPGINIPDQTVIKKGPVSLSKSNSNAVSAIPI 189
Query: 196 NKDNLFGGVVNPNEVFCSVPGRLSLLSSTSKYKVTVAEVQRRLSPPECLNASLLGGVLRR 255
NKDNLFGGVVNPNEVFCSVPGRLSLLSSTSKYKVTVAEVQRRLSPPECLNASLLGGVLRR
Sbjct: 190 NKDNLFGGVVNPNEVFCSVPGRLSLLSSTSKYKVTVAEVQRRLSPPECLNASLLGGVLRR 249
Query: 256 AKSKNGGRSLREKLDKIGLNLPAGRRKAANVTLLTSLVEGEAVHLARDFGYVCETEFPAK 315
AKSKNGGRSLREKLDKIGLNLPAGRRKAANVTLLTSLVEGEAVHLARDFGYVCETEFPAK
Sbjct: 250 AKSKNGGRSLREKLDKIGLNLPAGRRKAANVTLLTSLVEGEAVHLARDFGYVCETEFPAK 309
Query: 316 AVAEFLNRQHSDPNEQVTRKNMLLATKQICKEFTDLLAQDRSPLGNSRPNPILEPGIQSC 375
AVAEFLNRQHSDPNEQVTRKNMLLATKQICKEFTDLLAQDRSPLGNSRPNPILEPGIQSC
Sbjct: 310 AVAEFLNRQHSDPNEQVTRKNMLLATKQICKEFTDLLAQDRSPLGNSRPNPILEPGIQSC 369
Query: 376 LTHFNLISHGFGSPAVCAAVTALQNYLTEALKAMDKMYLSNNPNSHTDNNAKSSDKEEKH 435
LTHFNLISHGFGSPAVCAAVTALQNYLTEALKAMDKMYLSNNPNSHTDNNAKSSDKEEKH
Sbjct: 370 LTHFNLISHGFGSPAVCAAVTALQNYLTEALKAMDKMYLSNNPNSHTDNNAKSSDKEEKH 429
Query: 436 RK 437
RK
Sbjct: 430 RK 431
>gi|118582289 transcription factor AP-2 beta [Homo sapiens]
Length = 460
Score = 613 bits (1580), Expect = e-175
Identities = 329/458 (71%), Positives = 376/458 (82%), Gaps = 30/458 (6%)
Query: 1 MLWKLTDNIKYEDC-EDRHDGTSNGTARLPQLGTVGQSPYTSAPPLSHTPNADFQPPYFP 59
MLWKL +N+KYED EDRHDG + ++RL QLG+V Q PY+SAPPLSHTP++DFQPPYFP
Sbjct: 12 MLWKLVENVKYEDIYEDRHDGVPSHSSRLSQLGSVSQGPYSSAPPLSHTPSSDFQPPYFP 71
Query: 60 PPYQPI-YPQSQDPYSHVNDPYSLNPLHAQPQPQHPGWPGQRQSQESG-----LLHTHRG 113
PPYQP+ Y QSQDPYSHVNDPYSLNPLH QPQ QHP W GQRQ QE G LL R
Sbjct: 72 PPYQPLPYHQSQDPYSHVNDPYSLNPLH-QPQ-QHP-W-GQRQRQEVGSEAGSLLPQPRA 127
Query: 114 LPHQLSGLDPRRDY---RRHEDLLHGPH-ALSSGLGD-LSIHSLPH-AIEEVPHVEDP-- 165
QLSGLDPRRDY RR + LLH H L +G+GD LS+H L H +E+V VED
Sbjct: 128 ALPQLSGLDPRRDYHSVRRPDVLLHSAHHGLDAGMGDSLSLHGLGHPGMEDVQSVEDANN 187
Query: 166 -GINIPDQTVIKKGPVSLSKSNSNAVSAIPINKDNLFGGV-VNPNEVFCSVPGRLSLLSS 223
G+N+ DQ+VIKK PV +V+++ +NKD GG+ VN EVFCSVPGRLSLLSS
Sbjct: 188 SGMNLLDQSVIKKVPVP-----PKSVTSLMMNKDGFLGGMSVNTGEVFCSVPGRLSLLSS 242
Query: 224 TSKYKVTVAEVQRRLSPPECLNASLLGGVLRRAKSKNGGRSLREKLDKIGLNLPAGRRKA 283
TSKYKVTV EVQRRLSPPECLNASLLGGVLRRAKSKNGGRSLRE+L+KIGLNLPAGRRKA
Sbjct: 243 TSKYKVTVGEVQRRLSPPECLNASLLGGVLRRAKSKNGGRSLRERLEKIGLNLPAGRRKA 302
Query: 284 ANVTLLTSLVEGEAVHLARDFGYVCETEFPAKAVAEFLNRQHSDPNEQVTRKNMLLATKQ 343
ANVTLLTSLVEGEAVHLARDFGY+CETEFPAKAV+E+LNRQH+DP++ +RKNMLLATKQ
Sbjct: 303 ANVTLLTSLVEGEAVHLARDFGYICETEFPAKAVSEYLNRQHTDPSDLHSRKNMLLATKQ 362
Query: 344 ICKEFTDLLAQDRSPLGNSRPNPILEPGIQSCLTHFNLISHGFGSPAVCAAVTALQNYLT 403
+CKEFTDLLAQDR+P+GNSRP+PILEPGIQSCLTHF+LI+HGFG+PA+CAA+TALQNYLT
Sbjct: 363 LCKEFTDLLAQDRTPIGNSRPSPILEPGIQSCLTHFSLITHGFGAPAICAALTALQNYLT 422
Query: 404 EALKAMDKMYLSN-NPNSHTDN---NAKSSDKEEKHRK 437
EALK MDKM+L+N N HT +K+ DKEEKHRK
Sbjct: 423 EALKGMDKMFLNNTTTNRHTSGEGPGSKTGDKEEKHRK 460
>gi|4507445 transcription factor AP-2 gamma [Homo sapiens]
Length = 450
Score = 534 bits (1375), Expect = e-152
Identities = 294/459 (64%), Positives = 351/459 (76%), Gaps = 31/459 (6%)
Query: 1 MLWKLTDNIKYE-DCEDRHDGTSNGTARLPQLGTVGQSPYTSAPPLSHTPNADFQPP-YF 58
MLWK+TDN+KYE DCEDRHDG+SNG R+P L + GQ Y+ APPLSHT A++QPP YF
Sbjct: 1 MLWKITDNVKYEEDCEDRHDGSSNGNPRVPHLSSAGQHLYSPAPPLSHTGVAEYQPPPYF 60
Query: 59 PPPYQPI-YPQSQDPYSHVNDPYS--LNPLHAQPQP---QHPGWPGQRQSQESGLLHTHR 112
PPPYQ + Y QS DPYSH+ + Y+ +NPLH QP P Q WPG RQSQE L +H
Sbjct: 61 PPPYQQLAYSQSADPYSHLGEAYAAAINPLH-QPAPTGSQQQAWPG-RQSQEGAGLPSHH 118
Query: 113 G-----LPHQLSGLDP-----RRD-YRRHEDLLHGPHAL-SSGLGD-LSIHSLPHAIEEV 159
G LPH LSGL+ RRD YRR + LL HAL ++GL + L +H +PH ++EV
Sbjct: 119 GRPAGLLPH-LSGLEAGAVSARRDAYRRSDLLLPHAHALDAAGLAENLGLHDMPHQMDEV 177
Query: 160 PHVEDPGINIPDQTVIKKGPVSLSKSNSNAVSAIPINKDNLFGGVVNPNEVFCSVPGRLS 219
+V+D + + DQTVI+KGP+S++K+ N +P K+ L G V+NP EVFCSVPGRLS
Sbjct: 178 QNVDDQHLLLHDQTVIRKGPISMTKNPLN----LPCQKE-LVGAVMNPTEVFCSVPGRLS 232
Query: 220 LLSSTSKYKVTVAEVQRRLSPPECLNASLLGGVLRRAKSKNGGRSLREKLDKIGLNLPAG 279
LLSSTSKYKVTVAEVQRRLSPPECLNASLLGGVLRRAKSKNGGRSLREKLDKIGLNLPAG
Sbjct: 233 LLSSTSKYKVTVAEVQRRLSPPECLNASLLGGVLRRAKSKNGGRSLREKLDKIGLNLPAG 292
Query: 280 RRKAANVTLLTSLVEGEAVHLARDFGYVCETEFPAKAVAEFLNRQH-SDPNEQVTRKNML 338
RRKAA+VTLLTSLVEGEAVHLARDF YVCE EFP+K VAE+L R H NE RKNML
Sbjct: 293 RRKAAHVTLLTSLVEGEAVHLARDFAYVCEAEFPSKPVAEYLTRPHLGGRNEMAARKNML 352
Query: 339 LATKQICKEFTDLLAQDRSPLGNSRPNPILEPGIQSCLTHFNLISHGFGSPAVCAAVTAL 398
LA +Q+CKEFT+LL+QDR+P G SR P+LE IQ+CL+HF+LI+HGFGS A+CAAV+AL
Sbjct: 353 LAAQQLCKEFTELLSQDRTPHGTSRLAPVLETNIQNCLSHFSLITHGFGSQAICAAVSAL 412
Query: 399 QNYLTEALKAMDKMYLSNNPNSHTDNNAKSSDKEEKHRK 437
QNY+ EAL +DK Y++ S D+N K+ +K EKHRK
Sbjct: 413 QNYIKEALIVIDKSYMNPGDQSPADSN-KTLEKMEKHRK 450
>gi|194353976 transcription factor AP-2 epsilon (activating enhancer
binding protein 2 epsilon) [Homo sapiens]
Length = 442
Score = 481 bits (1238), Expect = e-136
Identities = 272/440 (61%), Positives = 321/440 (72%), Gaps = 35/440 (7%)
Query: 20 GTSNGTARLPQLGTVGQSPYTSAPPLSHTPNA----DFQPPYFPPPY-QPIYPQSQDP-- 72
G + G ARL L Q+ Y APPL HTP A +FQPPYFPPPY QP P Q P
Sbjct: 16 GAAAGGARLSSLP---QAAYGPAPPLCHTPAATAAAEFQPPYFPPPYPQPPLPYGQAPDA 72
Query: 73 ---YSHV-NDPYS-LNPLHAQPQPQHPGWPGQRQSQES-----GLLHTHRGLPHQLSGLD 122
+ H+ DPY L PL AQPQP W R + + GLL P + GLD
Sbjct: 73 AAAFPHLAGDPYGGLAPL-AQPQPPQAAWAAPRAAARAHEEPPGLLAP----PARALGLD 127
Query: 123 PRRDYRRHED-LLHGPHALSSGLGD--LSIHSLPHA--IEEVPHVEDPGINIPDQTVIKK 177
PRRDY LLHG + GL D L + L A +E++ +++PG+++ DQ+VIKK
Sbjct: 128 PRRDYATAVPRLLHGLADGAHGLADAPLGLPGLAAAPGLEDLQAMDEPGMSLLDQSVIKK 187
Query: 178 GPVSLSKSNSNAVSAIPINKDNLFGGVVNPNEVFCSVPGRLSLLSSTSKYKVTVAEVQRR 237
P+ S ++++SA+ + KD+L GG+ NP EVFCSVPGRLSLLSSTSKYKVTV EVQRR
Sbjct: 188 VPIP---SKASSLSALSLAKDSLVGGITNPGEVFCSVPGRLSLLSSTSKYKVTVGEVQRR 244
Query: 238 LSPPECLNASLLGGVLRRAKSKNGGRSLREKLDKIGLNLPAGRRKAANVTLLTSLVEGEA 297
LSPPECLNASLLGGVLRRAKSKNGGR LRE+L+KIGLNLPAGRRKAANVTLLTSLVEGEA
Sbjct: 245 LSPPECLNASLLGGVLRRAKSKNGGRCLRERLEKIGLNLPAGRRKAANVTLLTSLVEGEA 304
Query: 298 VHLARDFGYVCETEFPAKAVAEFLNRQHSDPNEQVTRKNMLLATKQICKEFTDLLAQDRS 357
VHLARDFGYVCETEFPAKA AE+L RQH+DP E +RK+MLLA KQICKEF DL+AQDRS
Sbjct: 305 VHLARDFGYVCETEFPAKAAAEYLCRQHADPGELHSRKSMLLAAKQICKEFADLMAQDRS 364
Query: 358 PLGNSRPNPILEPGIQSCLTHFNLISHGFGSPAVCAAVTALQNYLTEALKAMDKMYLSNN 417
PLGNSRP ILEPG+QSCLTHF+LI+HGFG PA+CAA+TA QNYL E+LK +DKM+LS+
Sbjct: 365 PLGNSRPALILEPGVQSCLTHFSLITHGFGGPAICAALTAFQNYLLESLKGLDKMFLSSV 424
Query: 418 PNSHTDNNAKSSDKEEKHRK 437
+ H K+S+K+ KHRK
Sbjct: 425 GSGH--GETKASEKDAKHRK 442
>gi|151301211 transcription factor AP-2 beta-like 1 [Homo sapiens]
Length = 452
Score = 355 bits (912), Expect = 3e-98
Identities = 228/461 (49%), Positives = 278/461 (60%), Gaps = 70/461 (15%)
Query: 13 DCEDRHDGTSNGTARLPQLG---TVGQSP--YTSAPPLSH-TPNADFQPPYFPPPYQ--P 64
D E RHDG+++ RL QLG +V S Y+S+ PL++ T +F PYF +Q P
Sbjct: 11 DAEIRHDGSNS--YRLMQLGCLESVANSTVAYSSSSPLTYSTTGTEFASPYFSTNHQYTP 68
Query: 65 IYPQS---QDPYSH---VNDPYSLNPLHAQPQPQ---HPGWPGQ---------------- 99
++ QS + +SH D YSLN LH Q H G P
Sbjct: 69 LHHQSFHYEFQHSHPAVTPDAYSLNSLHHSQQYYQQIHHGEPTDFINLHNARALKSSCLD 128
Query: 100 RQSQESGLLHTHRGLPHQLSGLDPRRDYRRHED--LLHGPHALSSGLGDLSIHSLPHAIE 157
Q +E G L +R H LS + Y H D LL GP S GL L ++E
Sbjct: 129 EQRRELGCLDAYRR--HDLSLMSHGSQYGMHPDQRLLPGP---SLGLAAAGADDLQGSVE 183
Query: 158 EVPHVEDPGINIPDQT-VIKKGPVSLSKSNSNAVSAIPINKDNLFGGVVNPNEVFCSVPG 216
G+ + Q VI++G VVNP ++FCSVPG
Sbjct: 184 A-----QCGLVLNGQGGVIRRGGTC----------------------VVNPTDLFCSVPG 216
Query: 217 RLSLLSSTSKYKVTVAEVQRRLSPPECLNASLLGGVLRRAKSKNGGRSLREKLDKIGLNL 276
RLSLLSSTSKYKVT+AEV+RRLSPPECLNASLLGG+LRRAKSKNGGR LREKLD++GLNL
Sbjct: 217 RLSLLSSTSKYKVTIAEVKRRLSPPECLNASLLGGILRRAKSKNGGRCLREKLDRLGLNL 276
Query: 277 PAGRRKAANVTLLTSLVEGEAVHLARDFGYVCETEFPAKAVAEFLNRQHSDPNEQVTRKN 336
PAGRRKAANVTLLTSLVEGEA+HLARDFGY CETEFPAKAV E L RQH + EQ RK
Sbjct: 277 PAGRRKAANVTLLTSLVEGEALHLARDFGYTCETEFPAKAVGEHLARQHMEQKEQTARKK 336
Query: 337 MLLATKQICKEFTDLLAQDRSPLGNSRPNPILEPGIQSCLTHFNLISHGFGSPAVCAAVT 396
M+LATKQICKEF DLL+QDRSPLG+SRP PIL+ IQ LTHF+LI+HGFG+PA+CAA++
Sbjct: 337 MILATKQICKEFQDLLSQDRSPLGSSRPTPILDLDIQRHLTHFSLITHGFGTPAICAALS 396
Query: 397 ALQNYLTEALKAMDKMYLSNNPNSHTDNNAKSSDKEEKHRK 437
Q L+E L ++K N + ++ ++ RK
Sbjct: 397 TFQTVLSEMLNYLEKHTTHKNGGAADSGQGHANSEKAPLRK 437
>gi|124378039 SEC16 homolog A [Homo sapiens]
Length = 2357
Score = 40.0 bits (92), Expect = 0.004
Identities = 42/154 (27%), Positives = 55/154 (35%), Gaps = 21/154 (13%)
Query: 34 VGQSPYTSAPPLSHTPNADF-QPPYFPPPYQPIYPQSQDPYSHVNDPYSLNPLHAQP--- 89
+G S +S P L A F Q P P+ SQ P + P + HA P
Sbjct: 67 LGSSSKSSPPVLQGPAPAGFSQHPGLLVPHTHARDSSQGPCEPLPGPLTQPRAHASPFSG 126
Query: 90 --QPQHPGWPGQRQSQESGL-----LHTHRGLPHQLSGLDPRRDYRRHEDLLHGPHALSS 142
P P P +S E G + T LPH + G+DP + H PH
Sbjct: 127 ALTPSAPPGPEMNRSAEVGPSSEPEVQTLPYLPHYIPGVDPETSHGGH------PHGNMP 180
Query: 143 GLGDLSIHSLPH----AIEEVPHVEDPGINIPDQ 172
GL PH P + PG+ +P Q
Sbjct: 181 GLDRPLSRQNPHDGVVTPAASPSLPQPGLQMPGQ 214
>gi|47578107 delangin isoform B [Homo sapiens]
Length = 2697
Score = 39.3 bits (90), Expect = 0.007
Identities = 40/124 (32%), Positives = 50/124 (40%), Gaps = 28/124 (22%)
Query: 45 LSHTPNADFQPPY--------------FPPPYQPIYPQSQDPYSHVNDPYSLNPLHAQPQ 90
+SH+P++ F PP P PY P P PYSH + Y+ +P Q
Sbjct: 147 ISHSPSSRFVPPQTSSGNRFMPQQNSPVPSPYAPQSPAGYMPYSHPSS-YTTHPQMQQAS 205
Query: 91 PQHPGWPGQRQSQESGLLHTH-RGLPHQLSG--LDPRRDYRRH---EDLLHGPHALSSGL 144
P G GL + H + LSG + D RH ED LH H LSS
Sbjct: 206 VSSPIVAG-------GLRNIHDNKVSGPLSGNSANHHADNPRHGSSEDYLHMVHRLSSDD 258
Query: 145 GDLS 148
GD S
Sbjct: 259 GDSS 262
>gi|47578105 delangin isoform A [Homo sapiens]
Length = 2804
Score = 39.3 bits (90), Expect = 0.007
Identities = 40/124 (32%), Positives = 50/124 (40%), Gaps = 28/124 (22%)
Query: 45 LSHTPNADFQPPY--------------FPPPYQPIYPQSQDPYSHVNDPYSLNPLHAQPQ 90
+SH+P++ F PP P PY P P PYSH + Y+ +P Q
Sbjct: 147 ISHSPSSRFVPPQTSSGNRFMPQQNSPVPSPYAPQSPAGYMPYSHPSS-YTTHPQMQQAS 205
Query: 91 PQHPGWPGQRQSQESGLLHTH-RGLPHQLSG--LDPRRDYRRH---EDLLHGPHALSSGL 144
P G GL + H + LSG + D RH ED LH H LSS
Sbjct: 206 VSSPIVAG-------GLRNIHDNKVSGPLSGNSANHHADNPRHGSSEDYLHMVHRLSSDD 258
Query: 145 GDLS 148
GD S
Sbjct: 259 GDSS 262
>gi|57863314 vacuolar protein sorting 37C [Homo sapiens]
Length = 355
Score = 38.9 bits (89), Expect = 0.009
Identities = 21/66 (31%), Positives = 27/66 (40%), Gaps = 2/66 (3%)
Query: 35 GQSPYTSAPPLSHTPNADFQPPYFPPPYQPIYPQSQDPYSHVNDPYSLNPL--HAQPQPQ 92
G++P P S P +PPY P P +P P + PY P + P P
Sbjct: 289 GRAPSPGYPQQSPYPATGGKPPYPIQPQLPSFPGQPQPSVPLQPPYPPGPAPPYGFPPPP 348
Query: 93 HPGWPG 98
P WPG
Sbjct: 349 GPAWPG 354
Score = 28.9 bits (63), Expect = 9.6
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 15/73 (20%)
Query: 38 PYTSAP-----PLSH--TPNADF----QPPYFPPPYQPIYPQSQ-DPYSHVNDPYSLNPL 85
PY+ +P P +H P A F QP ++ P P YP +Q P YS +P
Sbjct: 206 PYSPSPSLPVGPTAHGALPPAPFPVVSQPSFYSGPLGPTYPAAQLGPRGAAG--YSWSPQ 263
Query: 86 HAQ-PQPQHPGWP 97
+ P+P +PG P
Sbjct: 264 RSMPPRPGYPGTP 276
>gi|21314684 single stranded DNA binding protein 3 isoform b [Homo
sapiens]
Length = 368
Score = 38.5 bits (88), Expect = 0.012
Identities = 45/170 (26%), Positives = 65/170 (38%), Gaps = 22/170 (12%)
Query: 32 GTVGQSPYTSAPPLSHTPNADF----QPPYFPPPYQPIYPQSQDP---YSHVNDPYSLNP 84
G G P A P H P++ QPP P QP+ P S DP H N S+
Sbjct: 123 GPPGSQPSPHAQPPPHNPSSMMGPHSQPPGGVPGTQPLLPNSMDPTRQQGHPNMGGSMQR 182
Query: 85 LHAQPQPQHPGWPGQRQSQESGLLHTHRGLPHQLSGLDPRRDYRRHEDLLHGPHALSSGL 144
++ P+ P PG Q+ SG+ L + G++ GP A
Sbjct: 183 MN-PPRGMGPMGPGP-QNYGSGMRPPPNSLGPAMPGIN------------MGPGAGRPWP 228
Query: 145 GDLSIHSLPHAIEEV-PHVEDPGINIPDQTVIKKGPVSLSKSNSNAVSAI 193
S +S+P++ +V PG P T I P + S+ N + I
Sbjct: 229 NPNSANSIPYSSSSPGTYVGPPGGGGPPGTPIMPSPADSTNSSDNIYTMI 278
>gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens]
Length = 2285
Score = 38.1 bits (87), Expect = 0.016
Identities = 32/104 (30%), Positives = 37/104 (35%), Gaps = 21/104 (20%)
Query: 36 QSPYTSAPPLSHTPNAD----------------FQPPYFPPPYQPIYPQSQDPY----SH 75
Q PY+ PP S TP+A QPPY P QP + QS PY S
Sbjct: 482 QPPYSQQPP-SQTPHAQPSYQQQPQSQPPQLQSSQPPYSQQPSQPPHQQSPAPYPSQQST 540
Query: 76 VNDPYSLNPLHAQPQPQHPGWPGQRQSQESGLLHTHRGLPHQLS 119
P ++QPQ Q P Q Q L P S
Sbjct: 541 TQQHPQSQPPYSQPQAQSPYQQQQPQQPAPSTLSQQAAYPQPQS 584
Score = 33.1 bits (74), Expect = 0.51
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 11/69 (15%)
Query: 6 TDNIKYEDCEDRHDGT--SNGTARLPQLGTVGQSPYTSAPPLSHTPNADFQPPYFPPPYQ 63
TD + + D H+G+ S+GT + P P PP++ P +++QP PP Q
Sbjct: 1529 TDEMLHTDQRANHEGSWPSHGTRQPPY------GPSAPVPPMTRPPPSNYQP---PPSMQ 1579
Query: 64 PIYPQSQDP 72
PQ P
Sbjct: 1580 NHIPQVSSP 1588
Score = 32.0 bits (71), Expect = 1.1
Identities = 28/87 (32%), Positives = 36/87 (41%), Gaps = 10/87 (11%)
Query: 25 TARLPQLGTVGQSPYTSAPPLSHTPNADFQPPYFPPPYQPIY---PQSQDPY---SHVND 78
T ++P G G S Y TP + Q P+ P QP Y P SQ P+ S+
Sbjct: 448 TQQIPPYGQQGPSGYGQQ---GQTPYYNQQSPH-PQQQQPPYSQQPPSQTPHAQPSYQQQ 503
Query: 79 PYSLNPLHAQPQPQHPGWPGQRQSQES 105
P S P QP + P Q Q+S
Sbjct: 504 PQSQPPQLQSSQPPYSQQPSQPPHQQS 530
>gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens]
Length = 2068
Score = 38.1 bits (87), Expect = 0.016
Identities = 32/104 (30%), Positives = 37/104 (35%), Gaps = 21/104 (20%)
Query: 36 QSPYTSAPPLSHTPNAD----------------FQPPYFPPPYQPIYPQSQDPY----SH 75
Q PY+ PP S TP+A QPPY P QP + QS PY S
Sbjct: 482 QPPYSQQPP-SQTPHAQPSYQQQPQSQPPQLQSSQPPYSQQPSQPPHQQSPAPYPSQQST 540
Query: 76 VNDPYSLNPLHAQPQPQHPGWPGQRQSQESGLLHTHRGLPHQLS 119
P ++QPQ Q P Q Q L P S
Sbjct: 541 TQQHPQSQPPYSQPQAQSPYQQQQPQQPAPSTLSQQAAYPQPQS 584
Score = 32.0 bits (71), Expect = 1.1
Identities = 28/87 (32%), Positives = 36/87 (41%), Gaps = 10/87 (11%)
Query: 25 TARLPQLGTVGQSPYTSAPPLSHTPNADFQPPYFPPPYQPIY---PQSQDPY---SHVND 78
T ++P G G S Y TP + Q P+ P QP Y P SQ P+ S+
Sbjct: 448 TQQIPPYGQQGPSGYGQQ---GQTPYYNQQSPH-PQQQQPPYSQQPPSQTPHAQPSYQQQ 503
Query: 79 PYSLNPLHAQPQPQHPGWPGQRQSQES 105
P S P QP + P Q Q+S
Sbjct: 504 PQSQPPQLQSSQPPYSQQPSQPPHQQS 530
>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
sapiens]
Length = 5537
Score = 37.7 bits (86), Expect = 0.021
Identities = 26/73 (35%), Positives = 32/73 (43%), Gaps = 19/73 (26%)
Query: 29 PQLGTVGQSPYTSAP-------PLSHTPNADFQPPYFPPPYQPIYPQSQDPYSHVNDPYS 81
PQ + QSP T P P TP PY PP +P QS+DP++
Sbjct: 2415 PQSQSSSQSPLTPRPLSAEAFCPSPVTPRFQSPDPYSRPPSRP---QSRDPFA------- 2464
Query: 82 LNPLHAQPQPQHP 94
PLH P+PQ P
Sbjct: 2465 --PLHKPPRPQPP 2475
Score = 31.6 bits (70), Expect = 1.5
Identities = 21/60 (35%), Positives = 25/60 (41%), Gaps = 2/60 (3%)
Query: 38 PYTSAPPLSHTPNADFQPPYFPPPYQPIYPQSQDPYSHVNDPYSLNPLHAQPQPQHPGWP 97
P APP + + P + PP P PQ S + P S P AQ P HPG P
Sbjct: 4287 PRLPAPPGALSTGPVLGPVHPTPP--PSSPQEPKRPSQLPSPSSQLPTEAQLPPTHPGTP 4344
Score = 29.3 bits (64), Expect = 7.4
Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 11/47 (23%)
Query: 56 PYFPPPYQPIYPQSQDPYSHVN--------DPYSLNPLHAQPQPQHP 94
P PPP Q + P P SH + DPY+ PL +PQP P
Sbjct: 2349 PQEPPPAQALAPS---PPSHPDIFRPGSYTDPYAQPPLTPRPQPPPP 2392
>gi|57165375 glutamate receptor, ionotropic, N-methyl
D-aspartate-associated protein 1 [Homo sapiens]
Length = 371
Score = 37.4 bits (85), Expect = 0.027
Identities = 25/72 (34%), Positives = 29/72 (40%), Gaps = 11/72 (15%)
Query: 29 PQLGTVGQSPYTSAPPLSHTPNADFQPPYFPPPY-QPIYPQSQDPYSHVNDPYSLNPLHA 87
P + Q PY AP QPP+ P PY QP YP PY P P
Sbjct: 27 PPMPPYAQPPYPGAPYP--------QPPFQPSPYGQPGYPHGPSPYPQGGYPQGPYPQGG 78
Query: 88 QPQPQHP--GWP 97
PQ +P G+P
Sbjct: 79 YPQGPYPQEGYP 90
>gi|57165373 glutamate receptor, ionotropic, N-methyl
D-aspartate-associated protein 1 [Homo sapiens]
Length = 371
Score = 37.4 bits (85), Expect = 0.027
Identities = 25/72 (34%), Positives = 29/72 (40%), Gaps = 11/72 (15%)
Query: 29 PQLGTVGQSPYTSAPPLSHTPNADFQPPYFPPPY-QPIYPQSQDPYSHVNDPYSLNPLHA 87
P + Q PY AP QPP+ P PY QP YP PY P P
Sbjct: 27 PPMPPYAQPPYPGAPYP--------QPPFQPSPYGQPGYPHGPSPYPQGGYPQGPYPQGG 78
Query: 88 QPQPQHP--GWP 97
PQ +P G+P
Sbjct: 79 YPQGPYPQEGYP 90
>gi|112382226 atrophin-1 like protein isoform b [Homo sapiens]
Length = 1012
Score = 37.4 bits (85), Expect = 0.027
Identities = 39/121 (32%), Positives = 47/121 (38%), Gaps = 27/121 (22%)
Query: 29 PQLGTVGQSPYTSAPPLSHTPNADFQP-----PYFPPPY---------QPIYPQSQDPYS 74
PQL T G +P +A P +P A P P P P+ P P S P
Sbjct: 205 PQLPTPGPTPSATAVPPQGSPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRPPSPHPPP 264
Query: 75 HVNDPYSLNPL-----------HAQPQPQHPGWPGQRQSQESGLLHTHRGLPHQLSGLDP 123
H + L PL HAQP P H P S ++G L H G P Q GL P
Sbjct: 265 HPSPHPPLQPLTGSAGQPSAPSHAQP-PLHGQGPPGPHSLQAGPLLQHPG-PPQPFGLPP 322
Query: 124 R 124
+
Sbjct: 323 Q 323
Score = 30.8 bits (68), Expect = 2.5
Identities = 25/68 (36%), Positives = 29/68 (42%), Gaps = 11/68 (16%)
Query: 40 TSAPPLSHTPNADFQPPYFPPPYQPIYP----QSQD----PYSHVNDPYSLNPLHAQPQ- 90
T PP +H P P P P P P QSQ+ P SH P L+ + QP
Sbjct: 423 THHPPSAHPPPLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPASH--PPTGLHQVAPQPPF 480
Query: 91 PQHPGWPG 98
QHP PG
Sbjct: 481 AQHPFVPG 488
>gi|112382224 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 37.4 bits (85), Expect = 0.027
Identities = 39/121 (32%), Positives = 47/121 (38%), Gaps = 27/121 (22%)
Query: 29 PQLGTVGQSPYTSAPPLSHTPNADFQP-----PYFPPPY---------QPIYPQSQDPYS 74
PQL T G +P +A P +P A P P P P+ P P S P
Sbjct: 759 PQLPTPGPTPSATAVPPQGSPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRPPSPHPPP 818
Query: 75 HVNDPYSLNPL-----------HAQPQPQHPGWPGQRQSQESGLLHTHRGLPHQLSGLDP 123
H + L PL HAQP P H P S ++G L H G P Q GL P
Sbjct: 819 HPSPHPPLQPLTGSAGQPSAPSHAQP-PLHGQGPPGPHSLQAGPLLQHPG-PPQPFGLPP 876
Query: 124 R 124
+
Sbjct: 877 Q 877
Score = 30.8 bits (68), Expect = 2.5
Identities = 25/68 (36%), Positives = 29/68 (42%), Gaps = 11/68 (16%)
Query: 40 TSAPPLSHTPNADFQPPYFPPPYQPIYP----QSQD----PYSHVNDPYSLNPLHAQPQ- 90
T PP +H P P P P P P QSQ+ P SH P L+ + QP
Sbjct: 977 THHPPSAHPPPLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPASH--PPTGLHQVAPQPPF 1034
Query: 91 PQHPGWPG 98
QHP PG
Sbjct: 1035 AQHPFVPG 1042
>gi|112382216 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 37.4 bits (85), Expect = 0.027
Identities = 39/121 (32%), Positives = 47/121 (38%), Gaps = 27/121 (22%)
Query: 29 PQLGTVGQSPYTSAPPLSHTPNADFQP-----PYFPPPY---------QPIYPQSQDPYS 74
PQL T G +P +A P +P A P P P P+ P P S P
Sbjct: 759 PQLPTPGPTPSATAVPPQGSPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRPPSPHPPP 818
Query: 75 HVNDPYSLNPL-----------HAQPQPQHPGWPGQRQSQESGLLHTHRGLPHQLSGLDP 123
H + L PL HAQP P H P S ++G L H G P Q GL P
Sbjct: 819 HPSPHPPLQPLTGSAGQPSAPSHAQP-PLHGQGPPGPHSLQAGPLLQHPG-PPQPFGLPP 876
Query: 124 R 124
+
Sbjct: 877 Q 877
Score = 30.8 bits (68), Expect = 2.5
Identities = 25/68 (36%), Positives = 29/68 (42%), Gaps = 11/68 (16%)
Query: 40 TSAPPLSHTPNADFQPPYFPPPYQPIYP----QSQD----PYSHVNDPYSLNPLHAQPQ- 90
T PP +H P P P P P P QSQ+ P SH P L+ + QP
Sbjct: 977 THHPPSAHPPPLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPASH--PPTGLHQVAPQPPF 1034
Query: 91 PQHPGWPG 98
QHP PG
Sbjct: 1035 AQHPFVPG 1042
>gi|119226260 calcium homeostasis endoplasmic reticulum protein
[Homo sapiens]
Length = 916
Score = 37.0 bits (84), Expect = 0.035
Identities = 29/111 (26%), Positives = 40/111 (36%), Gaps = 17/111 (15%)
Query: 36 QSPYTSAPPLSHTPNADFQPPYFPPPYQPIYPQSQDPYSHVND-----------PYSLNP 84
Q P + PP H N F P + + P +P + PY H D P +P
Sbjct: 531 QHPQFNQPPHPHNFNR-FPPRFMQDDFPPRHPFERPPYPHRFDYPQGDFPAEMGPPHHHP 589
Query: 85 LHAQPQP---QHPGWPGQRQSQESGLLHTHRGLPHQLSGLDPRRDYRRHED 132
H P P +HP W G + H G P + P + H+D
Sbjct: 590 GHRMPHPGINEHPPWAGPQHPDFGPPPHGFNGQPPHMRRQGP--PHINHDD 638
>gi|162951884 R3H domain containing 2 [Homo sapiens]
Length = 976
Score = 36.6 bits (83), Expect = 0.046
Identities = 30/93 (32%), Positives = 40/93 (43%), Gaps = 18/93 (19%)
Query: 31 LGTVGQSPYTSAPPLSHT--PNADFQPP------YFPPPYQPIYPQSQDPYSHVNDPYSL 82
L T S + APP P QPP Y+PP YP S Y ++ P +
Sbjct: 486 LPTSNYSTSSHAPPTQQVLPPQGYMQPPQQIQVSYYPPGQ---YPNSNQQYRPLSHPVAY 542
Query: 83 NPLHAQ--PQP-QHPG----WPGQRQSQESGLL 108
+P Q PQP Q PG P Q+Q+ G++
Sbjct: 543 SPQRGQQLPQPSQQPGLQPMMPNQQQAAYQGMI 575
>gi|19718731 bromodomain-containing protein 4 isoform long [Homo
sapiens]
Length = 1362
Score = 35.8 bits (81), Expect = 0.079
Identities = 28/87 (32%), Positives = 31/87 (35%), Gaps = 10/87 (11%)
Query: 37 SPYTSAPPLSHTPNADFQPP-YFPPPYQPIYPQS-----QDPYSHVNDPYSLNPLHAQPQ 90
S + PP PP PPP QP PQ P H +DPYS L P
Sbjct: 1005 STHIQQPPPPQGQQPPHPPPGQQPPPPQPAKPQQVIQHHHSPRHHKSDPYSTGHLREAPS 1064
Query: 91 PQHPGWPGQRQSQESGLLHTHRGLPHQ 117
P P Q Q TH+ P Q
Sbjct: 1065 PLMIHSPQMSQFQSL----THQSPPQQ 1087
Score = 33.9 bits (76), Expect = 0.30
Identities = 28/84 (33%), Positives = 36/84 (42%), Gaps = 5/84 (5%)
Query: 24 GTARLPQLGTVGQSPYTSAPPLSHTPNADFQPPYFPP-PYQPIYPQ--SQDPYSHVNDPY 80
GTA+ P + TV + S PP + TP + P P P+ + P Q P V P
Sbjct: 187 GTAK-PGVSTVPNTTQASTPPQTQTPQPNPPPVQATPHPFPAVTPDLIVQTPVMTVVPPQ 245
Query: 81 SL-NPLHAQPQPQHPGWPGQRQSQ 103
L P PQPQ P P + Q
Sbjct: 246 PLQTPPPVPPQPQPPPAPAPQPVQ 269
Score = 30.8 bits (68), Expect = 2.5
Identities = 29/92 (31%), Positives = 33/92 (35%), Gaps = 22/92 (23%)
Query: 25 TARLPQLGTVGQSPYTSAPPLSHTPNADFQPPYFPPPYQPIYPQSQDPYSHVNDPYSLNP 84
T LP + Q P PP H P+ Q PPP P PQ H P P
Sbjct: 942 TPLLPSVKVQSQPP-PPLPPPPH-PSVQQQLQQQPPPPPPPQPQPPPQQQHQPPP---RP 996
Query: 85 LHAQP----------------QPQHPGWPGQR 100
+H QP QP HP PGQ+
Sbjct: 997 VHLQPMQFSTHIQQPPPPQGQQPPHPP-PGQQ 1027
Score = 28.9 bits (63), Expect = 9.6
Identities = 19/58 (32%), Positives = 22/58 (37%), Gaps = 2/58 (3%)
Query: 38 PYTSAPPLSHTPNADFQPPYFPPPYQPIYPQSQDPYSHVNDPYSLNPLHAQPQPQHPG 95
P PP P QPP PPP P PQ P + P + +PQ PG
Sbjct: 759 PPPQQPPPPPPPQQQQQPP--PPPPPPSMPQQAAPAMKSSPPPFIATQVPVLEPQLPG 814
>gi|151301053 RNA binding motif protein 33 [Homo sapiens]
Length = 1170
Score = 35.8 bits (81), Expect = 0.079
Identities = 32/95 (33%), Positives = 38/95 (40%), Gaps = 13/95 (13%)
Query: 27 RLPQLGTVGQS--PYTSAPPLSHTPNADFQPPYFPPPYQPIY---PQSQDPYSHVNDPYS 81
R P L GQ P + P L + PP+ P P QP PQ Q P+ + P
Sbjct: 558 RQPFLPGPGQPFLPTHTQPNLQGPLHPPLPPPHQPQPQQPQQQPPPQHQPPHQPPHQP-- 615
Query: 82 LNPLHAQPQPQH-PGWPGQRQSQESGLLHTHRGLP 115
P QP PQH P P Q Q H H +P
Sbjct: 616 --PPQHQPPPQHPPQHPPQHQHHHH---HHHLSVP 645
Score = 30.4 bits (67), Expect = 3.3
Identities = 19/46 (41%), Positives = 20/46 (43%), Gaps = 3/46 (6%)
Query: 54 QPPYFP--PPYQPIYPQSQDPYSHVNDPYSLNPLHAQPQPQHPGWP 97
QPP P PP P PQ Q P + P L PL P HP P
Sbjct: 312 QPPVVPQAPPPPPPPPQQQ-PIRSLFQPQPLQPLLPVQHPHHPSPP 356
Score = 29.6 bits (65), Expect = 5.6
Identities = 23/86 (26%), Positives = 28/86 (32%), Gaps = 7/86 (8%)
Query: 32 GTVGQSPYTSAPPLSHTPNADFQPPYFPPPYQPIYPQSQDPYSHVNDPYSLNPLHAQPQP 91
G VG ++ + P + P+ P P QP P P PLH P
Sbjct: 536 GPVGILHFSQPGSATTRPFIPPRQPFLPGPGQPFLPTHTQPNLQ-------GPLHPPLPP 588
Query: 92 QHPGWPGQRQSQESGLLHTHRGLPHQ 117
H P Q Q Q PHQ
Sbjct: 589 PHQPQPQQPQQQPPPQHQPPHQPPHQ 614
>gi|16418447 cysteine and tyrosine-rich 1 protein precursor [Homo
sapiens]
Length = 154
Score = 35.8 bits (81), Expect = 0.079
Identities = 22/64 (34%), Positives = 23/64 (35%), Gaps = 6/64 (9%)
Query: 14 CEDRHDGTSNGTARLPQLGTVGQSPYTSAPPLSHTPN----ADFQPPYFPPPYQPIYPQS 69
C H T G R + TV S Y PP H AD PPY P P P
Sbjct: 87 CMKNHRATRVGILRTTHINTV--SSYPGPPPYGHDHEMEYCADLPPPYSPTPQGPAQRSP 144
Query: 70 QDPY 73
PY
Sbjct: 145 PPPY 148
>gi|238859557 regulatory factor X1 [Homo sapiens]
Length = 979
Score = 35.4 bits (80), Expect = 0.10
Identities = 25/65 (38%), Positives = 29/65 (44%), Gaps = 3/65 (4%)
Query: 37 SPYTSAPPLSHTPNADFQPPYFPPPYQPIYPQSQDPYSHVNDPYSLNPLHAQPQPQHPGW 96
+P S PP + P A QPP PPP P PQ + Y QPQ Q PG
Sbjct: 12 APPPSQPPQA-PPQAQPQPPPPPPPAAPQPPQPPTAAATPQPQYVTELQSPQPQAQPPG- 69
Query: 97 PGQRQ 101
GQ+Q
Sbjct: 70 -GQKQ 73
>gi|239745813 PREDICTED: hypothetical protein XP_002343595 [Homo
sapiens]
Length = 279
Score = 35.4 bits (80), Expect = 0.10
Identities = 33/112 (29%), Positives = 46/112 (41%), Gaps = 20/112 (17%)
Query: 24 GTARLPQLGTVGQSPYTSAPPLSHTPNADFQPPYFPPPYQPIYPQSQDPYSHVNDPYSLN 83
GT RL L V ++ ++P P +P P P D + + P S
Sbjct: 11 GTDRLGILQWVDEAQMAASPL-----------PMYPGPT----PLPGDDHETQHPPSSSR 55
Query: 84 PLHAQPQPQHPGWPGQRQSQESGLLHTHRGLPHQLSGLDPRRDYRRHEDLLH 135
PL + QHP P +ESG+L GLP + SGL R + E + H
Sbjct: 56 PLSWPQKAQHPMGP-----EESGVLEPLVGLPRRRSGLVSRAGHSDAEPIPH 102
>gi|239757254 PREDICTED: hypothetical protein [Homo sapiens]
Length = 247
Score = 35.0 bits (79), Expect = 0.13
Identities = 30/102 (29%), Positives = 42/102 (41%), Gaps = 5/102 (4%)
Query: 44 PLSHTPNADFQPPYFPPPYQPIYPQSQDPYSHVNDPYSLNPLHAQPQPQHPGWPGQRQSQ 103
P SH P A+ P P+ + +Q P S ++ PY + P+P+ P +
Sbjct: 52 PDSHFPPANSSSQVAPLPF--LLSPAQPPASLLSLPYGSHRHPPSPRPRDPPASPSVAGR 109
Query: 104 ESGLLHTHRGLPHQLSGLDPRRDYRRHEDLLHGPHALSSGLG 145
S H+H Q+S PRR H PH SGLG
Sbjct: 110 ASAHAHSHADDASQVS---PRRVPAVHRLRAPSPHPGVSGLG 148
>gi|239755981 PREDICTED: hypothetical protein XP_002344766 [Homo
sapiens]
Length = 307
Score = 35.0 bits (79), Expect = 0.13
Identities = 22/66 (33%), Positives = 27/66 (40%), Gaps = 13/66 (19%)
Query: 44 PLSHTPNADFQPPYFPPPYQ------PIYPQSQDPY-------SHVNDPYSLNPLHAQPQ 90
PLSHTP+A PP PPP P +P +Q P S A+P+
Sbjct: 29 PLSHTPHATAHPPSSPPPLHITPVLPPTFPGTQPPRALRLAEGSGEGKQEEGRRAQARPR 88
Query: 91 PQHPGW 96
P P W
Sbjct: 89 PLRPPW 94
>gi|239750506 PREDICTED: hypothetical protein XP_002347417 [Homo
sapiens]
Length = 325
Score = 35.0 bits (79), Expect = 0.13
Identities = 22/66 (33%), Positives = 27/66 (40%), Gaps = 13/66 (19%)
Query: 44 PLSHTPNADFQPPYFPPPYQ------PIYPQSQDPY-------SHVNDPYSLNPLHAQPQ 90
PLSHTP+A PP PPP P +P +Q P S A+P+
Sbjct: 47 PLSHTPHATAHPPSSPPPLHITPVLPPTFPGTQPPRALRLAEGSGEGKQEEGRRAQARPR 106
Query: 91 PQHPGW 96
P P W
Sbjct: 107 PLRPPW 112
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.132 0.398
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,940,020
Number of Sequences: 37866
Number of extensions: 1066964
Number of successful extensions: 3782
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 202
Number of HSP's that attempted gapping in prelim test: 3325
Number of HSP's gapped (non-prelim): 525
length of query: 437
length of database: 18,247,518
effective HSP length: 105
effective length of query: 332
effective length of database: 14,271,588
effective search space: 4738167216
effective search space used: 4738167216
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.