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Search of human proteins with 4507285
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4507285 syntaxin 10 [Homo sapiens]
(249 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4507285 syntaxin 10 [Homo sapiens] 485 e-137
gi|5032131 syntaxin 6 [Homo sapiens] 303 1e-82
gi|4759188 syntaxin 8 [Homo sapiens] 52 5e-07
gi|18765733 synaptosomal-associated protein 25 isoform SNAP25A [... 46 3e-05
gi|18765735 synaptosomal-associated protein 25 isoform SNAP25B [... 44 1e-04
gi|4759184 syntaxin 3 [Homo sapiens] 44 2e-04
gi|194353964 coiled-coil domain containing 157 [Homo sapiens] 39 0.004
gi|47778943 syntaxin 16 isoform a [Homo sapiens] 38 0.007
gi|198041692 syntaxin 16 isoform d [Homo sapiens] 38 0.007
gi|198041688 syntaxin 16 isoform c [Homo sapiens] 38 0.007
gi|34447229 syntaxin 16 isoform b [Homo sapiens] 38 0.007
gi|16262452 cingulin [Homo sapiens] 38 0.009
gi|87298937 centrosomal protein 110kDa [Homo sapiens] 36 0.027
gi|33188443 microfilament and actin filament cross-linker protei... 35 0.047
gi|33188445 microfilament and actin filament cross-linker protei... 35 0.047
gi|226495417 coiled-coil domain containing 102A [Homo sapiens] 35 0.080
gi|13124879 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... 35 0.080
gi|92091586 smooth muscle myosin heavy chain 11 isoform SM1B [Ho... 35 0.080
gi|92091583 smooth muscle myosin heavy chain 11 isoform SM2B [Ho... 35 0.080
gi|13124875 smooth muscle myosin heavy chain 11 isoform SM2A [Ho... 35 0.080
gi|112420968 coiled-coil domain containing 158 [Homo sapiens] 34 0.10
gi|16418379 syntaxin 1B [Homo sapiens] 34 0.14
gi|205277396 dynactin 1 isoform 4 [Homo sapiens] 34 0.14
gi|205277392 dynactin 1 isoform 3 [Homo sapiens] 34 0.14
gi|13259508 dynactin 1 isoform 2 [Homo sapiens] 34 0.14
gi|13259510 dynactin 1 isoform 1 [Homo sapiens] 34 0.14
gi|38045898 RAB6-interacting protein 2 isoform epsilon [Homo sap... 33 0.18
gi|38045896 RAB6-interacting protein 2 isoform delta [Homo sapiens] 33 0.18
gi|4759182 syntaxin 1A (brain) [Homo sapiens] 33 0.18
gi|221219020 NYD-SP11 protein [Homo sapiens] 33 0.23
>gi|4507285 syntaxin 10 [Homo sapiens]
Length = 249
Score = 485 bits (1249), Expect = e-137
Identities = 249/249 (100%), Positives = 249/249 (100%)
Query: 1 MSLEDPFFVVRGEVQKAVNTARGLYQRWCELLQESAAVGREELDWTTNELRNGLRSIEWD 60
MSLEDPFFVVRGEVQKAVNTARGLYQRWCELLQESAAVGREELDWTTNELRNGLRSIEWD
Sbjct: 1 MSLEDPFFVVRGEVQKAVNTARGLYQRWCELLQESAAVGREELDWTTNELRNGLRSIEWD 60
Query: 61 LEDLEETIGIVEANPGKFKLPAGDLQERKVFVERMREAVQEMKDHMVSPTAVAFLERNNR 120
LEDLEETIGIVEANPGKFKLPAGDLQERKVFVERMREAVQEMKDHMVSPTAVAFLERNNR
Sbjct: 61 LEDLEETIGIVEANPGKFKLPAGDLQERKVFVERMREAVQEMKDHMVSPTAVAFLERNNR 120
Query: 121 EILAGKPAAQKSPSDLLDASAVSATSRYIEEQQATQQLIMDEQDQQLEMVSGSIQVLKHM 180
EILAGKPAAQKSPSDLLDASAVSATSRYIEEQQATQQLIMDEQDQQLEMVSGSIQVLKHM
Sbjct: 121 EILAGKPAAQKSPSDLLDASAVSATSRYIEEQQATQQLIMDEQDQQLEMVSGSIQVLKHM 180
Query: 181 SGRVGEELDEQGIMLDAFAQEMDHTQSRMDGVLRKLAKVSHMTSDRRQWCAIAVLVGVLL 240
SGRVGEELDEQGIMLDAFAQEMDHTQSRMDGVLRKLAKVSHMTSDRRQWCAIAVLVGVLL
Sbjct: 181 SGRVGEELDEQGIMLDAFAQEMDHTQSRMDGVLRKLAKVSHMTSDRRQWCAIAVLVGVLL 240
Query: 241 LVLILLFSL 249
LVLILLFSL
Sbjct: 241 LVLILLFSL 249
>gi|5032131 syntaxin 6 [Homo sapiens]
Length = 255
Score = 303 bits (775), Expect = 1e-82
Identities = 155/255 (60%), Positives = 192/255 (75%), Gaps = 6/255 (2%)
Query: 1 MSLEDPFFVVRGEVQKAVNTARGLYQRWCELLQESAAVGREELDWTTNELRNGLRSIEWD 60
MS+EDPFFVV+GEVQKAVNTA+GL+QRW ELLQ+ + REE+DWTTNELRN LRSIEWD
Sbjct: 1 MSMEDPFFVVKGEVQKAVNTAQGLFQRWTELLQDPSTATREEIDWTTNELRNNLRSIEWD 60
Query: 61 LEDLEETIGIVEANPGKFKLPAGDLQERKVFVERMREAVQEMKDHMVSPTAVAFLERNNR 120
LEDL+ETI IVEANP KF L A +L RK F+ R+ V++MKD M + + A ER NR
Sbjct: 61 LEDLDETISIVEANPRKFNLDATELSIRKAFITSTRQVVRDMKDQMSTSSVQALAERKNR 120
Query: 121 EILAGKPAAQKSPSDL------LDASAVSATSRYIEEQQATQQLIMDEQDQQLEMVSGSI 174
+ L G +Q + LD A S +IEEQQA QQLI+++QD+QLE+VSGSI
Sbjct: 121 QALLGDSGSQNWSTGTTDKYGRLDRELQRANSHFIEEQQAQQQLIVEQQDEQLELVSGSI 180
Query: 175 QVLKHMSGRVGEELDEQGIMLDAFAQEMDHTQSRMDGVLRKLAKVSHMTSDRRQWCAIAV 234
VLK+MS R+G EL+EQ +ML+ F+ E++ TQSR+D V++KLAKVSHMTSDRRQWCAIA+
Sbjct: 181 GVLKNMSQRIGGELEEQAVMLEDFSHELESTQSRLDNVMKKLAKVSHMTSDRRQWCAIAI 240
Query: 235 LVGVLLLVLILLFSL 249
L VLL+VLIL L
Sbjct: 241 LFAVLLVVLILFLVL 255
>gi|4759188 syntaxin 8 [Homo sapiens]
Length = 236
Score = 52.0 bits (123), Expect = 5e-07
Identities = 56/239 (23%), Positives = 103/239 (43%), Gaps = 30/239 (12%)
Query: 25 YQRWCELLQESAAVGREELDWTTNELRNGLRS------IEWDLEDLEETIGIVE------ 72
Y C++ QE A E++ R G ++ I L++L+E I +++
Sbjct: 10 YDSTCQIAQEIA----EKIQQRNQYERKGEKAPKLTVTIRALLQNLKEKIALLKDLLLRA 65
Query: 73 ANPGKFKLPAGDLQERKV--FVERMREAVQEMKDHMVSPTAVAFLERNNREILAGKPAAQ 130
+ + GD ++ + V R R + K+ P + R L + A +
Sbjct: 66 VSTHQITQLEGDRRQNLLDDLVTRERLLLASFKNEGAEPDLI-------RSSLMSEEAKR 118
Query: 131 KSPSDLLDASAVSATSRYIEEQQATQQLIMDEQDQQLEMVSGSIQVLKHMSGRVGEELDE 190
+P+ L +E + QQ I+ EQD L+ +S I K M +G ELDE
Sbjct: 119 GAPNPWLFEEPEETRGLGFDEIRQQQQKIIQEQDAGLDALSSIISRQKQMGQEIGNELDE 178
Query: 191 QGIMLDAFAQEMDHTQSRMDGVLRKLAKVSHMTSDRRQWCAIAVLVGVLLLVLILLFSL 249
Q ++D A +++T ++ R++ V DR+ ++V +LLLV I++ ++
Sbjct: 179 QNEIIDDLANLVENTDEKLRNETRRVNMV-----DRKSASCGMIMVILLLLVAIVVVAV 232
>gi|18765733 synaptosomal-associated protein 25 isoform SNAP25A
[Homo sapiens]
Length = 206
Score = 45.8 bits (107), Expect = 3e-05
Identities = 35/136 (25%), Positives = 64/136 (47%), Gaps = 15/136 (11%)
Query: 95 MREAVQEMKDHMVSPTAVAFLERNNREILAGKPAAQKSPSDLLDASAVSATSRYIEEQQ- 153
M+EA + +KD + F+ N+ L A +K+ + D S +R ++E++
Sbjct: 71 MKEAEKNLKD--LGKCCGLFICPCNK--LKSSDAYKKAWGNNQDGVVASQPARVVDEREQ 126
Query: 154 ----------ATQQLIMDEQDQQLEMVSGSIQVLKHMSGRVGEELDEQGIMLDAFAQEMD 203
T +E D+ LE VSG I L+HM+ +G E+D Q +D ++ D
Sbjct: 127 MAISGGFIRRVTNDARENEMDENLEQVSGIIGNLRHMALDMGNEIDTQNRQIDRIMEKAD 186
Query: 204 HTQSRMDGVLRKLAKV 219
++R+D ++ K+
Sbjct: 187 SNKTRIDEANQRATKM 202
>gi|18765735 synaptosomal-associated protein 25 isoform SNAP25B
[Homo sapiens]
Length = 206
Score = 44.3 bits (103), Expect = 1e-04
Identities = 28/108 (25%), Positives = 51/108 (47%), Gaps = 11/108 (10%)
Query: 123 LAGKPAAQKSPSDLLDASAVSATSRYIEEQQ-----------ATQQLIMDEQDQQLEMVS 171
L A +K+ + D S +R ++E++ T +E D+ LE VS
Sbjct: 95 LKSSDAYKKAWGNNQDGVVASQPARVVDEREQMAISGGFIRRVTNDARENEMDENLEQVS 154
Query: 172 GSIQVLKHMSGRVGEELDEQGIMLDAFAQEMDHTQSRMDGVLRKLAKV 219
G I L+HM+ +G E+D Q +D ++ D ++R+D ++ K+
Sbjct: 155 GIIGNLRHMALDMGNEIDTQNRQIDRIMEKADSNKTRIDEANQRATKM 202
>gi|4759184 syntaxin 3 [Homo sapiens]
Length = 289
Score = 43.5 bits (101), Expect = 2e-04
Identities = 50/219 (22%), Positives = 100/219 (45%), Gaps = 17/219 (7%)
Query: 40 REELDWTTNELRNGLRSIEWDLEDLEETIGIVEANPGKFKLPAGDLQERKVFVERM-REA 98
+++L+ T E++ ++ L+ +E+ I E + DL+ RK + R+
Sbjct: 74 KDDLEQLTTEIKKRANNVRNKLKSMEKHIEEDEVRS------SADLRIRKSQHSVLSRKF 127
Query: 99 VQEMKDHMVSPTAVAFLERNNREI-----LAGKPAAQKSPSDLLDASAVSATSRYIEEQQ 153
V+ M + + V F ER+ I + GK + ++L++ + + I + Q
Sbjct: 128 VEVMTKY--NEAQVDFRERSKGRIQRQLEITGKKTTDEELEEMLESGNPAIFTSGIIDSQ 185
Query: 154 ATQQLIMDEQDQQLEMV--SGSIQVLKHMSGRVGEELDEQGIMLDAFAQEMDHTQSRMDG 211
++Q + + + + ++V SI+ L M + ++ QG MLD + HT ++
Sbjct: 186 ISKQALSEIEGRHKDIVRLESSIKELHDMFMDIAMLVENQGEMLDNIELNVMHTVDHVEK 245
Query: 212 VLRKLAK-VSHMTSDRRQWCAIAVLVGVLLLVLILLFSL 249
+ K V + + R++ I VLV VLL +L L+ L
Sbjct: 246 ARDETKKAVKYQSQARKKLIIIIVLVVVLLGILALIIGL 284
>gi|194353964 coiled-coil domain containing 157 [Homo sapiens]
Length = 752
Score = 38.9 bits (89), Expect = 0.004
Identities = 38/186 (20%), Positives = 86/186 (46%), Gaps = 14/186 (7%)
Query: 12 GEVQKAVNTARGLYQRWCELLQESAAV---GREELDWTTNELRNGLRSIEWDLEDLEETI 68
G++++A+ +G +R E ++ + +++L T++L+ + ++E +L+ E+
Sbjct: 312 GKLEQALKQEQGARRRQAEEDEQCLSEWEHDKQQLLTETSDLKTKMATLERELKQQREST 371
Query: 69 GIVEANPGKFKLPAGDLQERKVFVERMREAVQEMKDHMVSPTAVAFLERNNREILAGKPA 128
VEA + + + V+++ E VQ+++ + V LE +++
Sbjct: 372 QAVEAKAQQLQEEGERRAAAERQVQQLEEQVQQLEAQV--QLLVGRLEGAGQQVCWASTE 429
Query: 129 AQKSPSDLLDASAVSATSRYIEEQQATQQLIM---DEQDQQLEMVSGSIQVLKHMSGRVG 185
K + + V + R+ E QA Q+ ++ D DQ+ E + GS+ + RV
Sbjct: 430 LDK------EKARVDSMVRHQESLQAKQRALLKQLDSLDQEREELRGSLDEAEAQRARVE 483
Query: 186 EELDEQ 191
E+L +
Sbjct: 484 EQLQSE 489
>gi|47778943 syntaxin 16 isoform a [Homo sapiens]
Length = 325
Score = 38.1 bits (87), Expect = 0.007
Identities = 18/89 (20%), Positives = 48/89 (53%)
Query: 158 LIMDEQDQQLEMVSGSIQVLKHMSGRVGEELDEQGIMLDAFAQEMDHTQSRMDGVLRKLA 217
L+++E+++++ + SI L + +G + EQG +LD ++ + + + L++L
Sbjct: 231 LMVEEREREIRQIVQSISDLNEIFRDLGAMIVEQGTVLDRIDYNVEQSCIKTEDGLKQLH 290
Query: 218 KVSHMTSDRRQWCAIAVLVGVLLLVLILL 246
K R+ I +L ++++++++L
Sbjct: 291 KAEQYQKKNRKMLVILILFVIIIVLIVVL 319
>gi|198041692 syntaxin 16 isoform d [Homo sapiens]
Length = 308
Score = 38.1 bits (87), Expect = 0.007
Identities = 18/89 (20%), Positives = 48/89 (53%)
Query: 158 LIMDEQDQQLEMVSGSIQVLKHMSGRVGEELDEQGIMLDAFAQEMDHTQSRMDGVLRKLA 217
L+++E+++++ + SI L + +G + EQG +LD ++ + + + L++L
Sbjct: 214 LMVEEREREIRQIVQSISDLNEIFRDLGAMIVEQGTVLDRIDYNVEQSCIKTEDGLKQLH 273
Query: 218 KVSHMTSDRRQWCAIAVLVGVLLLVLILL 246
K R+ I +L ++++++++L
Sbjct: 274 KAEQYQKKNRKMLVILILFVIIIVLIVVL 302
>gi|198041688 syntaxin 16 isoform c [Homo sapiens]
Length = 321
Score = 38.1 bits (87), Expect = 0.007
Identities = 18/89 (20%), Positives = 48/89 (53%)
Query: 158 LIMDEQDQQLEMVSGSIQVLKHMSGRVGEELDEQGIMLDAFAQEMDHTQSRMDGVLRKLA 217
L+++E+++++ + SI L + +G + EQG +LD ++ + + + L++L
Sbjct: 227 LMVEEREREIRQIVQSISDLNEIFRDLGAMIVEQGTVLDRIDYNVEQSCIKTEDGLKQLH 286
Query: 218 KVSHMTSDRRQWCAIAVLVGVLLLVLILL 246
K R+ I +L ++++++++L
Sbjct: 287 KAEQYQKKNRKMLVILILFVIIIVLIVVL 315
>gi|34447229 syntaxin 16 isoform b [Homo sapiens]
Length = 304
Score = 38.1 bits (87), Expect = 0.007
Identities = 18/89 (20%), Positives = 48/89 (53%)
Query: 158 LIMDEQDQQLEMVSGSIQVLKHMSGRVGEELDEQGIMLDAFAQEMDHTQSRMDGVLRKLA 217
L+++E+++++ + SI L + +G + EQG +LD ++ + + + L++L
Sbjct: 210 LMVEEREREIRQIVQSISDLNEIFRDLGAMIVEQGTVLDRIDYNVEQSCIKTEDGLKQLH 269
Query: 218 KVSHMTSDRRQWCAIAVLVGVLLLVLILL 246
K R+ I +L ++++++++L
Sbjct: 270 KAEQYQKKNRKMLVILILFVIIIVLIVVL 298
>gi|16262452 cingulin [Homo sapiens]
Length = 1203
Score = 37.7 bits (86), Expect = 0.009
Identities = 47/214 (21%), Positives = 88/214 (41%), Gaps = 15/214 (7%)
Query: 9 VVRGEVQKAVNTARGLYQRWCELLQESA------AVGREELDWTTNELRNGLRSIEWDLE 62
V+ E QK RGL + E +E+ +E+L T EL E E
Sbjct: 542 VLEAERQKMSALVRGLQRELEETSEETGHWQSMFQKNKEDLRATKQELLQLRMEKEEMEE 601
Query: 63 DLEETIGIVEANPGKFKLPAGDLQERKVFVERMREAVQEMKDHMVSPTAVAFLERNNREI 122
+L E I +++ + + AGD ++ +V + + +E+K+ ER ++E+
Sbjct: 602 ELGEKIEVLQRELEQARASAGDTRQVEVLKKELLRTQEELKELQA--------ERQSQEV 653
Query: 123 LAGKPAAQKSPSDLLDASAVSATSRYIEEQQATQQLIMDEQDQQLEMVSGSIQVLKHMSG 182
AG+ ++ L + R +EEQ Q + + Q E S + V + +
Sbjct: 654 -AGRHRDRELEKQLAVLRVEADRGRELEEQNLQLQKTLQQLRQDCEEASKAKMVAEAEAT 712
Query: 183 RVGEELDEQGIMLDAFAQEMDHTQSRMDGVLRKL 216
+G+ L +E D + R+ G+ ++L
Sbjct: 713 VLGQRRAAVETTLRETQEENDEFRRRILGLEQQL 746
>gi|87298937 centrosomal protein 110kDa [Homo sapiens]
Length = 2325
Score = 36.2 bits (82), Expect = 0.027
Identities = 31/159 (19%), Positives = 70/159 (44%), Gaps = 11/159 (6%)
Query: 60 DLEDLEETIGIVEANPGKFKLPAGDLQERKVFVERMREAVQEMKDHMVSPTAVAFLERNN 119
+L+ L++ I + E N L+E +V ++ R ++++K + S ++
Sbjct: 1546 ELQKLQKDIEMAERNEDHHLQV---LKESEVLLQAKRAELEKLKSQVTS-------QQQE 1595
Query: 120 REILAGKPAAQKSPSDLLDASAVSATSRYIEEQQATQQLIMDEQDQQLEMVSGSIQVLKH 179
+L + +K LL S V A + ++E + + E+ + V ++ L
Sbjct: 1596 MAVLDRQLGHKKEELHLLQGSMVQAKAD-LQEALRLGETEVTEKCNHIREVKSLLEELSF 1654
Query: 180 MSGRVGEELDEQGIMLDAFAQEMDHTQSRMDGVLRKLAK 218
G + ++ E+ L QE++ + + VLR+++K
Sbjct: 1655 QKGELNVQISERKTQLTLIKQEIEKEEENLQVVLRQMSK 1693
Score = 32.3 bits (72), Expect = 0.40
Identities = 40/204 (19%), Positives = 86/204 (42%), Gaps = 29/204 (14%)
Query: 41 EELDWTTNELRNGLRSIEWDLEDLEETIGIVEANPGKFKLPAGDLQERKVFVERMREAVQ 100
E+L+ +L+ L + D L I ++ LQE++ V ++E +
Sbjct: 1825 EKLELNVRKLQQELDQLNRDKLSLHNDISAMQQQ----------LQEKREAVNSLQEELA 1874
Query: 101 EMKDHM-VSPTAVAFLERNNREILAGKPAAQKSPSDLLDASAVSATSRYIEEQQATQQLI 159
++DH+ ++ + ++ +L+ + QK S+ A+ + E +Q Q++
Sbjct: 1875 NVQDHLNLAKQDLLHTTKHQDVLLSEQTRLQKDISEW--ANRFEDCQKEEETKQQQLQVL 1932
Query: 160 MDE-QDQQLEMVSGSIQVLKHMSGRVGEE---------LDEQGIMLDAFAQEMDHTQSRM 209
+E ++ +L++V + + R EE L EQ L+ +E+ +S++
Sbjct: 1933 QNEIEENKLKLVQQEMMFQRLQKERESEESKLETSKVTLKEQQHQLE---KELTDQKSKL 1989
Query: 210 DGVLRKLAKVSHMT---SDRRQWC 230
D VL K+ + +WC
Sbjct: 1990 DQVLSKVLAAEERVRTLQEEERWC 2013
>gi|33188443 microfilament and actin filament cross-linker protein
isoform b [Homo sapiens]
Length = 5938
Score = 35.4 bits (80), Expect = 0.047
Identities = 37/184 (20%), Positives = 77/184 (41%), Gaps = 27/184 (14%)
Query: 55 RSIEWDLEDLEETIGIVEAN-PGK--FKLPAGDLQERKVFVERMREAVQEMKDHMVSPTA 111
+S++ LE L ++IG VE N GK L +G +QE ++++ + K
Sbjct: 2550 QSVQESLESLLQSIGEVEQNLEGKQVSSLSSGVIQEALATNMKLKQDIARQKSS------ 2603
Query: 112 VAFLERNNREILAGKPAAQKSPSDLLDASAVSATSRYIEEQQATQQLIMDEQDQQLEMVS 171
LE + A + + +L + R+ EQ QQ E++ L+ +
Sbjct: 2604 ---LEATREMVTRFMETADSTTAAVLQGKLAEVSQRF--EQLCLQQ---QEKESSLKKLL 2655
Query: 172 GSIQVLKHMSGRVGEELDEQGIMLDA----------FAQEMDHTQSRMDGVLRKLAKVSH 221
++ +H+SG++ + ++ + ML + F Q++ M+ L + H
Sbjct: 2656 PQAEMFEHLSGKLQQFMENKSRMLASGNQPDQDITHFFQQIQELNLEMEDQQENLDTLEH 2715
Query: 222 MTSD 225
+ ++
Sbjct: 2716 LVTE 2719
>gi|33188445 microfilament and actin filament cross-linker protein
isoform a [Homo sapiens]
Length = 5430
Score = 35.4 bits (80), Expect = 0.047
Identities = 37/184 (20%), Positives = 77/184 (41%), Gaps = 27/184 (14%)
Query: 55 RSIEWDLEDLEETIGIVEAN-PGK--FKLPAGDLQERKVFVERMREAVQEMKDHMVSPTA 111
+S++ LE L ++IG VE N GK L +G +QE ++++ + K
Sbjct: 2048 QSVQESLESLLQSIGEVEQNLEGKQVSSLSSGVIQEALATNMKLKQDIARQKSS------ 2101
Query: 112 VAFLERNNREILAGKPAAQKSPSDLLDASAVSATSRYIEEQQATQQLIMDEQDQQLEMVS 171
LE + A + + +L + R+ EQ QQ E++ L+ +
Sbjct: 2102 ---LEATREMVTRFMETADSTTAAVLQGKLAEVSQRF--EQLCLQQ---QEKESSLKKLL 2153
Query: 172 GSIQVLKHMSGRVGEELDEQGIMLDA----------FAQEMDHTQSRMDGVLRKLAKVSH 221
++ +H+SG++ + ++ + ML + F Q++ M+ L + H
Sbjct: 2154 PQAEMFEHLSGKLQQFMENKSRMLASGNQPDQDITHFFQQIQELNLEMEDQQENLDTLEH 2213
Query: 222 MTSD 225
+ ++
Sbjct: 2214 LVTE 2217
>gi|226495417 coiled-coil domain containing 102A [Homo sapiens]
Length = 550
Score = 34.7 bits (78), Expect = 0.080
Identities = 40/182 (21%), Positives = 74/182 (40%), Gaps = 17/182 (9%)
Query: 40 REELDWTTNELRNGLRSI------EWDLEDLEET--IGIVEANPGKFKLPAGDLQERKVF 91
R +D ELR + + EW + ET +G+ N K + GDL+E
Sbjct: 333 RSSMDRKMAELRGEMERLQAENAAEWGRRERLETEKLGLERENK-KLRAQVGDLEE--AL 389
Query: 92 VERMREAVQEMKDHMVSPTAVAFLERNNREILAGKPAAQKSPSDLLDASAVSA-TSRYIE 150
R R+ + + + A F N+E+ K K + A A +R +E
Sbjct: 390 ARRRRQTASALDCDLRASQAALF--EKNKELADLKHVHGKLKKQFQEKVAELAHANRRVE 447
Query: 151 EQQATQQ---LIMDEQDQQLEMVSGSIQVLKHMSGRVGEELDEQGIMLDAFAQEMDHTQS 207
+ +A + L ++E ++L + + + ++ LDEQ + +++H QS
Sbjct: 448 QHEAEVKKLRLRVEELKKELAQAEDELDEAHNQARKLQRSLDEQTEQSENLQVQLEHLQS 507
Query: 208 RM 209
R+
Sbjct: 508 RL 509
>gi|13124879 smooth muscle myosin heavy chain 11 isoform SM1A [Homo
sapiens]
Length = 1972
Score = 34.7 bits (78), Expect = 0.080
Identities = 43/187 (22%), Positives = 76/187 (40%), Gaps = 24/187 (12%)
Query: 30 ELLQESAAVGREELDWTTNELRNGLRSIEWDLEDL----EETIGIVEANPGKFKLPAGD- 84
EL +SA GREE +L+ ++ + +LED +E + N K K D
Sbjct: 1630 ELQADSAIKGREEAIKQLRKLQAQMKDFQRELEDARASRDEIFATAKENEKKAKSLEADL 1689
Query: 85 --LQERKVFVERMREAVQEMKDHMVSPTAVAFLERNNREILAGKPAAQKSPSDLLDASAV 142
LQE ER R+ K+ + A + L+G+ A Q L + +
Sbjct: 1690 MQLQEDLAAAERARKQADLEKEELAEELASS---------LSGRNALQDEKRRL--EARI 1738
Query: 143 SATSRYIEEQQATQQLIMD---EQDQQLEMVSGSIQVLKHMSGR---VGEELDEQGIMLD 196
+ +EE+Q + + D + QQ E +S + + + + ++L+ Q L
Sbjct: 1739 AQLEEELEEEQGNMEAMSDRVRKATQQAEQLSNELATERSTAQKNESARQQLERQNKELR 1798
Query: 197 AFAQEMD 203
+ EM+
Sbjct: 1799 SKLHEME 1805
Score = 30.8 bits (68), Expect = 1.2
Identities = 52/238 (21%), Positives = 96/238 (40%), Gaps = 28/238 (11%)
Query: 10 VRGEVQKAVNTARGLYQRWCELLQESAAVG---REELDWTTNELRNGLRSIEWDLEDLEE 66
V G+ ++ V + + + LQ + G R EL+ ++L+N + S+ L + E
Sbjct: 1242 VLGQAKQEVEHKKKKLEAQVQELQSKCSDGERARAELNDKVHKLQNEVESVTGMLNEAEG 1301
Query: 67 TIGIVEANPGKFKLPAGDLQE-------RKVFV-------ERMREAVQEMKDHMVSPTAV 112
+ + D QE +K+ V E R ++Q+ D + A
Sbjct: 1302 KAIKLAKDVASLSSQLQDTQELLQEETRQKLNVSTKLRQLEEERNSLQDQLDEEME--AK 1359
Query: 113 AFLERNNREILAGKPAAQKSPSDLLDASAVSATSRYIEEQQATQQLIMDEQDQQLEMVSG 172
LER+ + ++K D AS V A +EE + Q ++ QQ E +
Sbjct: 1360 QNLERHISTLNIQLSDSKKKLQDF--ASTVEA----LEEGKKRFQKEIENLTQQYEEKAA 1413
Query: 173 SIQVLKHMSGRVGEELDEQGIMLD---AFAQEMDHTQSRMDGVLRKLAKVSHMTSDRR 227
+ L+ R+ +ELD+ + LD ++ Q + D +L + +S +D R
Sbjct: 1414 AYDKLEKTKNRLQQELDDLVVDLDNQRQLVSNLEKKQRKFDQLLAEEKNISSKYADER 1471
>gi|92091586 smooth muscle myosin heavy chain 11 isoform SM1B [Homo
sapiens]
Length = 1979
Score = 34.7 bits (78), Expect = 0.080
Identities = 43/187 (22%), Positives = 76/187 (40%), Gaps = 24/187 (12%)
Query: 30 ELLQESAAVGREELDWTTNELRNGLRSIEWDLEDL----EETIGIVEANPGKFKLPAGD- 84
EL +SA GREE +L+ ++ + +LED +E + N K K D
Sbjct: 1637 ELQADSAIKGREEAIKQLRKLQAQMKDFQRELEDARASRDEIFATAKENEKKAKSLEADL 1696
Query: 85 --LQERKVFVERMREAVQEMKDHMVSPTAVAFLERNNREILAGKPAAQKSPSDLLDASAV 142
LQE ER R+ K+ + A + L+G+ A Q L + +
Sbjct: 1697 MQLQEDLAAAERARKQADLEKEELAEELASS---------LSGRNALQDEKRRL--EARI 1745
Query: 143 SATSRYIEEQQATQQLIMD---EQDQQLEMVSGSIQVLKHMSGR---VGEELDEQGIMLD 196
+ +EE+Q + + D + QQ E +S + + + + ++L+ Q L
Sbjct: 1746 AQLEEELEEEQGNMEAMSDRVRKATQQAEQLSNELATERSTAQKNESARQQLERQNKELR 1805
Query: 197 AFAQEMD 203
+ EM+
Sbjct: 1806 SKLHEME 1812
Score = 30.8 bits (68), Expect = 1.2
Identities = 52/238 (21%), Positives = 96/238 (40%), Gaps = 28/238 (11%)
Query: 10 VRGEVQKAVNTARGLYQRWCELLQESAAVG---REELDWTTNELRNGLRSIEWDLEDLEE 66
V G+ ++ V + + + LQ + G R EL+ ++L+N + S+ L + E
Sbjct: 1249 VLGQAKQEVEHKKKKLEAQVQELQSKCSDGERARAELNDKVHKLQNEVESVTGMLNEAEG 1308
Query: 67 TIGIVEANPGKFKLPAGDLQE-------RKVFV-------ERMREAVQEMKDHMVSPTAV 112
+ + D QE +K+ V E R ++Q+ D + A
Sbjct: 1309 KAIKLAKDVASLSSQLQDTQELLQEETRQKLNVSTKLRQLEEERNSLQDQLDEEME--AK 1366
Query: 113 AFLERNNREILAGKPAAQKSPSDLLDASAVSATSRYIEEQQATQQLIMDEQDQQLEMVSG 172
LER+ + ++K D AS V A +EE + Q ++ QQ E +
Sbjct: 1367 QNLERHISTLNIQLSDSKKKLQDF--ASTVEA----LEEGKKRFQKEIENLTQQYEEKAA 1420
Query: 173 SIQVLKHMSGRVGEELDEQGIMLD---AFAQEMDHTQSRMDGVLRKLAKVSHMTSDRR 227
+ L+ R+ +ELD+ + LD ++ Q + D +L + +S +D R
Sbjct: 1421 AYDKLEKTKNRLQQELDDLVVDLDNQRQLVSNLEKKQRKFDQLLAEEKNISSKYADER 1478
>gi|92091583 smooth muscle myosin heavy chain 11 isoform SM2B [Homo
sapiens]
Length = 1945
Score = 34.7 bits (78), Expect = 0.080
Identities = 43/187 (22%), Positives = 76/187 (40%), Gaps = 24/187 (12%)
Query: 30 ELLQESAAVGREELDWTTNELRNGLRSIEWDLEDL----EETIGIVEANPGKFKLPAGD- 84
EL +SA GREE +L+ ++ + +LED +E + N K K D
Sbjct: 1637 ELQADSAIKGREEAIKQLRKLQAQMKDFQRELEDARASRDEIFATAKENEKKAKSLEADL 1696
Query: 85 --LQERKVFVERMREAVQEMKDHMVSPTAVAFLERNNREILAGKPAAQKSPSDLLDASAV 142
LQE ER R+ K+ + A + L+G+ A Q L + +
Sbjct: 1697 MQLQEDLAAAERARKQADLEKEELAEELASS---------LSGRNALQDEKRRL--EARI 1745
Query: 143 SATSRYIEEQQATQQLIMD---EQDQQLEMVSGSIQVLKHMSGR---VGEELDEQGIMLD 196
+ +EE+Q + + D + QQ E +S + + + + ++L+ Q L
Sbjct: 1746 AQLEEELEEEQGNMEAMSDRVRKATQQAEQLSNELATERSTAQKNESARQQLERQNKELR 1805
Query: 197 AFAQEMD 203
+ EM+
Sbjct: 1806 SKLHEME 1812
Score = 30.8 bits (68), Expect = 1.2
Identities = 52/238 (21%), Positives = 96/238 (40%), Gaps = 28/238 (11%)
Query: 10 VRGEVQKAVNTARGLYQRWCELLQESAAVG---REELDWTTNELRNGLRSIEWDLEDLEE 66
V G+ ++ V + + + LQ + G R EL+ ++L+N + S+ L + E
Sbjct: 1249 VLGQAKQEVEHKKKKLEAQVQELQSKCSDGERARAELNDKVHKLQNEVESVTGMLNEAEG 1308
Query: 67 TIGIVEANPGKFKLPAGDLQE-------RKVFV-------ERMREAVQEMKDHMVSPTAV 112
+ + D QE +K+ V E R ++Q+ D + A
Sbjct: 1309 KAIKLAKDVASLSSQLQDTQELLQEETRQKLNVSTKLRQLEEERNSLQDQLDEEME--AK 1366
Query: 113 AFLERNNREILAGKPAAQKSPSDLLDASAVSATSRYIEEQQATQQLIMDEQDQQLEMVSG 172
LER+ + ++K D AS V A +EE + Q ++ QQ E +
Sbjct: 1367 QNLERHISTLNIQLSDSKKKLQDF--ASTVEA----LEEGKKRFQKEIENLTQQYEEKAA 1420
Query: 173 SIQVLKHMSGRVGEELDEQGIMLD---AFAQEMDHTQSRMDGVLRKLAKVSHMTSDRR 227
+ L+ R+ +ELD+ + LD ++ Q + D +L + +S +D R
Sbjct: 1421 AYDKLEKTKNRLQQELDDLVVDLDNQRQLVSNLEKKQRKFDQLLAEEKNISSKYADER 1478
>gi|13124875 smooth muscle myosin heavy chain 11 isoform SM2A [Homo
sapiens]
Length = 1938
Score = 34.7 bits (78), Expect = 0.080
Identities = 43/187 (22%), Positives = 76/187 (40%), Gaps = 24/187 (12%)
Query: 30 ELLQESAAVGREELDWTTNELRNGLRSIEWDLEDL----EETIGIVEANPGKFKLPAGD- 84
EL +SA GREE +L+ ++ + +LED +E + N K K D
Sbjct: 1630 ELQADSAIKGREEAIKQLRKLQAQMKDFQRELEDARASRDEIFATAKENEKKAKSLEADL 1689
Query: 85 --LQERKVFVERMREAVQEMKDHMVSPTAVAFLERNNREILAGKPAAQKSPSDLLDASAV 142
LQE ER R+ K+ + A + L+G+ A Q L + +
Sbjct: 1690 MQLQEDLAAAERARKQADLEKEELAEELASS---------LSGRNALQDEKRRL--EARI 1738
Query: 143 SATSRYIEEQQATQQLIMD---EQDQQLEMVSGSIQVLKHMSGR---VGEELDEQGIMLD 196
+ +EE+Q + + D + QQ E +S + + + + ++L+ Q L
Sbjct: 1739 AQLEEELEEEQGNMEAMSDRVRKATQQAEQLSNELATERSTAQKNESARQQLERQNKELR 1798
Query: 197 AFAQEMD 203
+ EM+
Sbjct: 1799 SKLHEME 1805
Score = 30.8 bits (68), Expect = 1.2
Identities = 52/238 (21%), Positives = 96/238 (40%), Gaps = 28/238 (11%)
Query: 10 VRGEVQKAVNTARGLYQRWCELLQESAAVG---REELDWTTNELRNGLRSIEWDLEDLEE 66
V G+ ++ V + + + LQ + G R EL+ ++L+N + S+ L + E
Sbjct: 1242 VLGQAKQEVEHKKKKLEAQVQELQSKCSDGERARAELNDKVHKLQNEVESVTGMLNEAEG 1301
Query: 67 TIGIVEANPGKFKLPAGDLQE-------RKVFV-------ERMREAVQEMKDHMVSPTAV 112
+ + D QE +K+ V E R ++Q+ D + A
Sbjct: 1302 KAIKLAKDVASLSSQLQDTQELLQEETRQKLNVSTKLRQLEEERNSLQDQLDEEME--AK 1359
Query: 113 AFLERNNREILAGKPAAQKSPSDLLDASAVSATSRYIEEQQATQQLIMDEQDQQLEMVSG 172
LER+ + ++K D AS V A +EE + Q ++ QQ E +
Sbjct: 1360 QNLERHISTLNIQLSDSKKKLQDF--ASTVEA----LEEGKKRFQKEIENLTQQYEEKAA 1413
Query: 173 SIQVLKHMSGRVGEELDEQGIMLD---AFAQEMDHTQSRMDGVLRKLAKVSHMTSDRR 227
+ L+ R+ +ELD+ + LD ++ Q + D +L + +S +D R
Sbjct: 1414 AYDKLEKTKNRLQQELDDLVVDLDNQRQLVSNLEKKQRKFDQLLAEEKNISSKYADER 1471
>gi|112420968 coiled-coil domain containing 158 [Homo sapiens]
Length = 1113
Score = 34.3 bits (77), Expect = 0.10
Identities = 28/161 (17%), Positives = 74/161 (45%), Gaps = 6/161 (3%)
Query: 30 ELLQESAAVGREELDWTTNELRNGLRSIEWDLEDLEETIGIVEANPGKFKLPAGDLQE-- 87
E+L+ + EE++ TTN+L+ L+S + +LE T+ +E + G A +Q+
Sbjct: 677 EVLKRNFRNKSEEMEMTTNKLKMQLKSAQSELEQTRNTLKSMEGSDGHAMKVAMGMQKQI 736
Query: 88 --RKVFVERMREAVQEMKDHMVSPTAVAFLERNNREILAGKPAAQKSPSDLL--DASAVS 143
++ ++ ++ +Q +++ M + + + L+ + + + + + + +
Sbjct: 737 TAKRGQIDALQSKIQFLEEAMTNANKEKHFLKEEKSKLSQELSTVATEKNKMAGELEVLR 796
Query: 144 ATSRYIEEQQATQQLIMDEQDQQLEMVSGSIQVLKHMSGRV 184
+ R ++E+ ++ +D+ Q IQ + S R+
Sbjct: 797 SQERRLKEKVTNMEVALDKASLQFAECQDIIQRQEQESVRL 837
>gi|16418379 syntaxin 1B [Homo sapiens]
Length = 288
Score = 33.9 bits (76), Expect = 0.14
Identities = 43/206 (20%), Positives = 95/206 (46%), Gaps = 19/206 (9%)
Query: 46 TTNELRNGLRSIEWDLEDLEETIGIVEANPGKFKLPAGDLQERKVFVERM-REAVQEMKD 104
T N++R+ L++IE +E E + DL+ RK + R+ V+ M +
Sbjct: 84 TANKVRSKLKAIEQSIEQEEG-----------LNRSSADLRIRKTQHSTLSRKFVEVMTE 132
Query: 105 HMVSPTAVA--FLERNNREI-LAGKPAAQKSPSDLLDASAVSATSRYIE-EQQATQQLIM 160
+ + + +R R++ + G+ + D+L++ ++ + I+ + Q T+Q +
Sbjct: 133 YNATQSKYRDRCKDRIQRQLEITGRTTTNEELEDMLESGKLAIFTDDIKMDSQMTKQALN 192
Query: 161 DEQDQQLEMVS--GSIQVLKHMSGRVGEELDEQGIMLDAFAQEMDHTQSRMDGVLRKLAK 218
+ + + E++ SI+ L M + ++ QG M+D ++H+ ++ + K
Sbjct: 193 EIETRHNEIIKLETSIRELHDMFVDMAMLVESQGEMIDRIEYNVEHSVDYVERAVSDTKK 252
Query: 219 -VSHMTSDRRQWCAIAVLVGVLLLVL 243
V + + RR+ I + VL +VL
Sbjct: 253 AVKYQSKARRKKIMIIICCVVLGVVL 278
>gi|205277396 dynactin 1 isoform 4 [Homo sapiens]
Length = 1139
Score = 33.9 bits (76), Expect = 0.14
Identities = 39/184 (21%), Positives = 79/184 (42%), Gaps = 17/184 (9%)
Query: 26 QRWCELLQESAAVGREELDWTTNELRNGLRSIEWDLEDLEETIGIVEANPGKFKLPAGDL 85
Q W +QE A + L E + L + E +E++ +T +E L
Sbjct: 125 QEWKSKMQEQQADLQRRLKEARKEAKEALEAKERYMEEMADTADAIE----MATLDKEMA 180
Query: 86 QERKVFVERMREAVQEMKDHMVSPTAV--AFLERNNREILAGK---PAAQKSPSDLLDAS 140
+ER +++ EA++E D + + + A +E + A ++ + L DA
Sbjct: 181 EERAESLQQEVEALKERVDELTTDLEILKAEIEEKGSDGAASSYQLKQLEEQNARLKDAL 240
Query: 141 AVSATSRYIEEQQATQ-QLIMDEQDQQLEMVSGSIQVLKHMSGRVGEELDEQGIMLDAFA 199
E+Q+ + Q +M++++Q+LE V++ R+ EEL + +D
Sbjct: 241 VRMRDLSSSEKQEHVKLQKLMEKKNQELE-------VVRQQRERLQEELSQAESTIDELK 293
Query: 200 QEMD 203
+++D
Sbjct: 294 EQVD 297
>gi|205277392 dynactin 1 isoform 3 [Homo sapiens]
Length = 1253
Score = 33.9 bits (76), Expect = 0.14
Identities = 39/184 (21%), Positives = 79/184 (42%), Gaps = 17/184 (9%)
Query: 26 QRWCELLQESAAVGREELDWTTNELRNGLRSIEWDLEDLEETIGIVEANPGKFKLPAGDL 85
Q W +QE A + L E + L + E +E++ +T +E L
Sbjct: 239 QEWKSKMQEQQADLQRRLKEARKEAKEALEAKERYMEEMADTADAIE----MATLDKEMA 294
Query: 86 QERKVFVERMREAVQEMKDHMVSPTAV--AFLERNNREILAGK---PAAQKSPSDLLDAS 140
+ER +++ EA++E D + + + A +E + A ++ + L DA
Sbjct: 295 EERAESLQQEVEALKERVDELTTDLEILKAEIEEKGSDGAASSYQLKQLEEQNARLKDAL 354
Query: 141 AVSATSRYIEEQQATQ-QLIMDEQDQQLEMVSGSIQVLKHMSGRVGEELDEQGIMLDAFA 199
E+Q+ + Q +M++++Q+LE V++ R+ EEL + +D
Sbjct: 355 VRMRDLSSSEKQEHVKLQKLMEKKNQELE-------VVRQQRERLQEELSQAESTIDELK 407
Query: 200 QEMD 203
+++D
Sbjct: 408 EQVD 411
>gi|13259508 dynactin 1 isoform 2 [Homo sapiens]
Length = 1144
Score = 33.9 bits (76), Expect = 0.14
Identities = 39/184 (21%), Positives = 79/184 (42%), Gaps = 17/184 (9%)
Query: 26 QRWCELLQESAAVGREELDWTTNELRNGLRSIEWDLEDLEETIGIVEANPGKFKLPAGDL 85
Q W +QE A + L E + L + E +E++ +T +E L
Sbjct: 125 QEWKSKMQEQQADLQRRLKEARKEAKEALEAKERYMEEMADTADAIE----MATLDKEMA 180
Query: 86 QERKVFVERMREAVQEMKDHMVSPTAV--AFLERNNREILAGK---PAAQKSPSDLLDAS 140
+ER +++ EA++E D + + + A +E + A ++ + L DA
Sbjct: 181 EERAESLQQEVEALKERVDELTTDLEILKAEIEEKGSDGAASSYQLKQLEEQNARLKDAL 240
Query: 141 AVSATSRYIEEQQATQ-QLIMDEQDQQLEMVSGSIQVLKHMSGRVGEELDEQGIMLDAFA 199
E+Q+ + Q +M++++Q+LE V++ R+ EEL + +D
Sbjct: 241 VRMRDLSSSEKQEHVKLQKLMEKKNQELE-------VVRQQRERLQEELSQAESTIDELK 293
Query: 200 QEMD 203
+++D
Sbjct: 294 EQVD 297
>gi|13259510 dynactin 1 isoform 1 [Homo sapiens]
Length = 1278
Score = 33.9 bits (76), Expect = 0.14
Identities = 39/184 (21%), Positives = 79/184 (42%), Gaps = 17/184 (9%)
Query: 26 QRWCELLQESAAVGREELDWTTNELRNGLRSIEWDLEDLEETIGIVEANPGKFKLPAGDL 85
Q W +QE A + L E + L + E +E++ +T +E L
Sbjct: 259 QEWKSKMQEQQADLQRRLKEARKEAKEALEAKERYMEEMADTADAIE----MATLDKEMA 314
Query: 86 QERKVFVERMREAVQEMKDHMVSPTAV--AFLERNNREILAGK---PAAQKSPSDLLDAS 140
+ER +++ EA++E D + + + A +E + A ++ + L DA
Sbjct: 315 EERAESLQQEVEALKERVDELTTDLEILKAEIEEKGSDGAASSYQLKQLEEQNARLKDAL 374
Query: 141 AVSATSRYIEEQQATQ-QLIMDEQDQQLEMVSGSIQVLKHMSGRVGEELDEQGIMLDAFA 199
E+Q+ + Q +M++++Q+LE V++ R+ EEL + +D
Sbjct: 375 VRMRDLSSSEKQEHVKLQKLMEKKNQELE-------VVRQQRERLQEELSQAESTIDELK 427
Query: 200 QEMD 203
+++D
Sbjct: 428 EQVD 431
>gi|38045898 RAB6-interacting protein 2 isoform epsilon [Homo
sapiens]
Length = 1116
Score = 33.5 bits (75), Expect = 0.18
Identities = 31/154 (20%), Positives = 65/154 (42%), Gaps = 17/154 (11%)
Query: 40 REELDWTTNELRNGLRSIEWDLEDLEETIGIVEANPGKFKLPAGDLQERKVFVERMREAV 99
+E+ D E + + + + DL+DL+E + +++ GDL E++ + ++E
Sbjct: 633 KEQRDRDEREKQEEIDNYKKDLKDLKEKVSLLQ----------GDLSEKEASLLDLKEHA 682
Query: 100 QEM------KDHMVSPTAVAFLERNNREILAGKPAAQKSPSDLLDASAVSATSRYIEEQQ 153
+ KD + +A LE+ E L + +K+ L+A A S I+ +
Sbjct: 683 SSLASSGLKKDSRLKTLEIA-LEQKKEECLKMESQLKKAHEAALEARASPEMSDRIQHLE 741
Query: 154 ATQQLIMDEQDQQLEMVSGSIQVLKHMSGRVGEE 187
DE + V +++LK + ++
Sbjct: 742 REITRYKDESSKAQAEVDRLLEILKEVENEKNDK 775
>gi|38045896 RAB6-interacting protein 2 isoform delta [Homo sapiens]
Length = 1088
Score = 33.5 bits (75), Expect = 0.18
Identities = 31/154 (20%), Positives = 65/154 (42%), Gaps = 17/154 (11%)
Query: 40 REELDWTTNELRNGLRSIEWDLEDLEETIGIVEANPGKFKLPAGDLQERKVFVERMREAV 99
+E+ D E + + + + DL+DL+E + +++ GDL E++ + ++E
Sbjct: 605 KEQRDRDEREKQEEIDNYKKDLKDLKEKVSLLQ----------GDLSEKEASLLDLKEHA 654
Query: 100 QEM------KDHMVSPTAVAFLERNNREILAGKPAAQKSPSDLLDASAVSATSRYIEEQQ 153
+ KD + +A LE+ E L + +K+ L+A A S I+ +
Sbjct: 655 SSLASSGLKKDSRLKTLEIA-LEQKKEECLKMESQLKKAHEAALEARASPEMSDRIQHLE 713
Query: 154 ATQQLIMDEQDQQLEMVSGSIQVLKHMSGRVGEE 187
DE + V +++LK + ++
Sbjct: 714 REITRYKDESSKAQAEVDRLLEILKEVENEKNDK 747
>gi|4759182 syntaxin 1A (brain) [Homo sapiens]
Length = 288
Score = 33.5 bits (75), Expect = 0.18
Identities = 44/203 (21%), Positives = 88/203 (43%), Gaps = 13/203 (6%)
Query: 46 TTNELRNGLRSIEWDLEDLEETIGIVEANPGKFKLPAGDLQERKVFVERMREAVQEMKDH 105
T N++R+ L+SIE +E EE + A+ K L + FVE M E D+
Sbjct: 85 TANKVRSKLKSIEQSIEQ-EEGLNRSSADLRIRKTQHSTLSRK--FVEVMSEYNATQSDY 141
Query: 106 MVSPTAVAFLERNNREI-LAGKPAAQKSPSDLLDASAVSA-TSRYIEEQQATQQLIMDEQ 163
R R++ + G+ + D+L++ + S I + ++Q + + +
Sbjct: 142 RERCKG-----RIQRQLEITGRTTTSEELEDMLESGNPAIFASGIIMDSSISKQALSEIE 196
Query: 164 DQQLEMVS--GSIQVLKHMSGRVGEELDEQGIMLDAFAQEMDHTQSRMDGVLRKLAK-VS 220
+ E++ SI+ L M + ++ QG M+D ++H ++ + K V
Sbjct: 197 TRHSEIIKLENSIRELHDMFMDMAMLVESQGEMIDRIEYNVEHAVDYVERAVSDTKKAVK 256
Query: 221 HMTSDRRQWCAIAVLVGVLLLVL 243
+ + RR+ I + +L +V+
Sbjct: 257 YQSKARRKKIMIIICCVILGIVI 279
>gi|221219020 NYD-SP11 protein [Homo sapiens]
Length = 2873
Score = 33.1 bits (74), Expect = 0.23
Identities = 19/77 (24%), Positives = 31/77 (40%)
Query: 41 EELDWTTNELRNGLRSIEWDLEDLEETIGIVEANPGKFKLPAGDLQERKVFVERMREAVQ 100
+ LDW EL L +EWD+E+L + GK L E + + RE +
Sbjct: 1705 QNLDWQEKELAQELEELEWDMEELSWKEEELNQEEGKLVEEKKKLAEEEEALAWQREKLS 1764
Query: 101 EMKDHMVSPTAVAFLER 117
E + + + E+
Sbjct: 1765 EEETKLAQEEELLIQEK 1781
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.132 0.369
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,320,566
Number of Sequences: 37866
Number of extensions: 352157
Number of successful extensions: 1503
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 91
Number of HSP's that attempted gapping in prelim test: 1393
Number of HSP's gapped (non-prelim): 203
length of query: 249
length of database: 18,247,518
effective HSP length: 100
effective length of query: 149
effective length of database: 14,460,918
effective search space: 2154676782
effective search space used: 2154676782
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.