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Search of human proteins with 4506613
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4506613 ribosomal protein L22 proprotein [Homo sapiens]
(128 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4506613 ribosomal protein L22 proprotein [Homo sapiens] 257 2e-69
gi|153791384 ribosomal protein L22-like 1 [Homo sapiens] 175 8e-45
gi|212549536 regulator of G-protein signaling like 1 [Homo sapiens] 33 0.046
gi|57242757 calsyntenin 1 isoform 1 [Homo sapiens] 30 0.39
gi|57242755 calsyntenin 1 isoform 2 [Homo sapiens] 30 0.39
gi|32455252 phosphoinositide-3-kinase, regulatory subunit 1 (alp... 27 3.3
gi|32455250 phosphoinositide-3-kinase, regulatory subunit 1 (alp... 27 3.3
gi|32455248 phosphoinositide-3-kinase, regulatory subunit 1 (alp... 27 3.3
gi|156142199 euchromatic histone-lysine N-methyltransferase 2 is... 27 3.3
gi|156142197 euchromatic histone-lysine N-methyltransferase 2 is... 27 3.3
gi|16507200 ubiquitin specific protease 28 [Homo sapiens] 27 3.3
gi|21359969 polymerase (RNA) III (DNA directed) polypeptide C (6... 27 3.3
gi|217330639 phosphoinositide-3-kinase, regulatory subunit 5 [Ho... 27 4.4
gi|217330622 phosphoinositide-3-kinase, regulatory subunit 5 [Ho... 27 4.4
gi|4826908 phosphoinositide-3-kinase, regulatory subunit 2 (beta... 27 5.7
gi|4557565 excision repair cross-complementing rodent repair def... 27 5.7
gi|54607116 leiomodin 3 (fetal) [Homo sapiens] 27 5.7
gi|51173735 ras responsive element binding protein 1 isoform 2 [... 26 7.4
gi|51173737 ras responsive element binding protein 1 isoform 1 [... 26 7.4
gi|4503257 death-domain associated protein isoform a [Homo sapiens] 26 9.7
gi|215422388 death-domain associated protein isoform a [Homo sap... 26 9.7
gi|215422366 death-domain associated protein isoform b [Homo sap... 26 9.7
gi|25777671 protein phosphatase 1, regulatory subunit 10 [Homo s... 26 9.7
gi|134304838 eukaryotic translation initiation factor 2-alpha ki... 26 9.7
gi|118150660 erythropoietin 4 immediate early response [Homo sap... 26 9.7
gi|118766347 zinc finger CCCH-type domain containing 6 [Homo sap... 26 9.7
gi|23308693 zinc finger and BTB domain containing 9 [Homo sapiens] 26 9.7
>gi|4506613 ribosomal protein L22 proprotein [Homo sapiens]
Length = 128
Score = 257 bits (657), Expect = 2e-69
Identities = 128/128 (100%), Positives = 128/128 (100%)
Query: 1 MAPVKKLVVKGGKKKKQVLKFTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGV 60
MAPVKKLVVKGGKKKKQVLKFTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGV
Sbjct: 1 MAPVKKLVVKGGKKKKQVLKFTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGV 60
Query: 61 VTIERSKSKITVTSEVPFSKRYLKYLTKKYLKKNNLRDWLRVVANSKESYELRYFQINQD 120
VTIERSKSKITVTSEVPFSKRYLKYLTKKYLKKNNLRDWLRVVANSKESYELRYFQINQD
Sbjct: 61 VTIERSKSKITVTSEVPFSKRYLKYLTKKYLKKNNLRDWLRVVANSKESYELRYFQINQD 120
Query: 121 EEEEEDED 128
EEEEEDED
Sbjct: 121 EEEEEDED 128
>gi|153791384 ribosomal protein L22-like 1 [Homo sapiens]
Length = 122
Score = 175 bits (444), Expect = 8e-45
Identities = 87/119 (73%), Positives = 98/119 (82%), Gaps = 1/119 (0%)
Query: 10 KGGKKKKQVLKFTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSKSK 69
K K K+ +F LD THPVEDGI D+ NFEQFL+E++KVNGK GNLG VV IER K+K
Sbjct: 5 KDRKPKRSTWRFNLDLTHPVEDGIFDSGNFEQFLREKVKVNGKTGNLGN-VVHIERFKNK 63
Query: 70 ITVTSEVPFSKRYLKYLTKKYLKKNNLRDWLRVVANSKESYELRYFQINQDEEEEEDED 128
ITV SE FSKRYLKYLTKKYLKKNNLRDWLRVVA+ KE+YELRYFQI+QDE+E E ED
Sbjct: 64 ITVVSEKQFSKRYLKYLTKKYLKKNNLRDWLRVVASDKETYELRYFQISQDEDESESED 122
>gi|212549536 regulator of G-protein signaling like 1 [Homo sapiens]
Length = 1076
Score = 33.5 bits (75), Expect = 0.046
Identities = 14/59 (23%), Positives = 32/59 (54%)
Query: 69 KITVTSEVPFSKRYLKYLTKKYLKKNNLRDWLRVVANSKESYELRYFQINQDEEEEEDE 127
++ V SEV S R + YL+++ + W+R+++ + + R F +N + +E ++
Sbjct: 762 EVEVQSEVQISSRKPSKIVSTYLQESQKKGWMRMISFIRSFCKYRRFMLNPSKRQEFED 820
>gi|57242757 calsyntenin 1 isoform 1 [Homo sapiens]
Length = 981
Score = 30.4 bits (67), Expect = 0.39
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 4/39 (10%)
Query: 93 KNNLRDW----LRVVANSKESYELRYFQINQDEEEEEDE 127
K N DW L + N E+YE ++ ++EEEEE+E
Sbjct: 897 KENEMDWDDSALTITVNPMETYEDQHSSEEEEEEEEEEE 935
>gi|57242755 calsyntenin 1 isoform 2 [Homo sapiens]
Length = 971
Score = 30.4 bits (67), Expect = 0.39
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 4/39 (10%)
Query: 93 KNNLRDW----LRVVANSKESYELRYFQINQDEEEEEDE 127
K N DW L + N E+YE ++ ++EEEEE+E
Sbjct: 887 KENEMDWDDSALTITVNPMETYEDQHSSEEEEEEEEEEE 925
>gi|32455252 phosphoinositide-3-kinase, regulatory subunit 1 (alpha)
isoform 2 [Homo sapiens]
Length = 454
Score = 27.3 bits (59), Expect = 3.3
Identities = 13/42 (30%), Positives = 24/42 (57%), Gaps = 5/42 (11%)
Query: 81 RYLKYLTKKYLKKNNLRDWLRVVANSKESYELRYFQINQDEE 122
+YL +LT+K +++ L +WL E+ E +Y + DE+
Sbjct: 309 QYLMWLTQKGVRQKKLNEWL-----GNENTEDQYSLVEDDED 345
>gi|32455250 phosphoinositide-3-kinase, regulatory subunit 1 (alpha)
isoform 3 [Homo sapiens]
Length = 424
Score = 27.3 bits (59), Expect = 3.3
Identities = 13/42 (30%), Positives = 24/42 (57%), Gaps = 5/42 (11%)
Query: 81 RYLKYLTKKYLKKNNLRDWLRVVANSKESYELRYFQINQDEE 122
+YL +LT+K +++ L +WL E+ E +Y + DE+
Sbjct: 279 QYLMWLTQKGVRQKKLNEWL-----GNENTEDQYSLVEDDED 315
>gi|32455248 phosphoinositide-3-kinase, regulatory subunit 1 (alpha)
isoform 1 [Homo sapiens]
Length = 724
Score = 27.3 bits (59), Expect = 3.3
Identities = 13/42 (30%), Positives = 24/42 (57%), Gaps = 5/42 (11%)
Query: 81 RYLKYLTKKYLKKNNLRDWLRVVANSKESYELRYFQINQDEE 122
+YL +LT+K +++ L +WL E+ E +Y + DE+
Sbjct: 579 QYLMWLTQKGVRQKKLNEWL-----GNENTEDQYSLVEDDED 615
>gi|156142199 euchromatic histone-lysine N-methyltransferase 2
isoform b [Homo sapiens]
Length = 1176
Score = 27.3 bits (59), Expect = 3.3
Identities = 12/28 (42%), Positives = 20/28 (71%)
Query: 101 RVVANSKESYELRYFQINQDEEEEEDED 128
RV ++SK E Q++++EEEEE+E+
Sbjct: 282 RVDSDSKSEVEALTEQLSEEEEEEEEEE 309
>gi|156142197 euchromatic histone-lysine N-methyltransferase 2
isoform a [Homo sapiens]
Length = 1210
Score = 27.3 bits (59), Expect = 3.3
Identities = 12/28 (42%), Positives = 20/28 (71%)
Query: 101 RVVANSKESYELRYFQINQDEEEEEDED 128
RV ++SK E Q++++EEEEE+E+
Sbjct: 282 RVDSDSKSEVEALTEQLSEEEEEEEEEE 309
>gi|16507200 ubiquitin specific protease 28 [Homo sapiens]
Length = 1077
Score = 27.3 bits (59), Expect = 3.3
Identities = 16/61 (26%), Positives = 27/61 (44%)
Query: 9 VKGGKKKKQVLKFTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSKS 68
V+G K+VL +D TH +D + A +I+ +G+ N + E +S
Sbjct: 78 VEGSAANKEVLAKVIDLTHDNKDDLQAAIALSLLESPKIQADGRDLNRMHEATSAETKRS 137
Query: 69 K 69
K
Sbjct: 138 K 138
>gi|21359969 polymerase (RNA) III (DNA directed) polypeptide C
(62kD) [Homo sapiens]
Length = 534
Score = 27.3 bits (59), Expect = 3.3
Identities = 21/81 (25%), Positives = 40/81 (49%), Gaps = 13/81 (16%)
Query: 51 GKAGNLGGGVVTIERSK---SKITVTSEVPFSKR--------YLKYLTKKYLKKNNLRDW 99
GK+G+ GGG+ I K S T T E +R + L KK++++ + D+
Sbjct: 324 GKSGDSGGGMYVINLHKALASLATATLESVVQERFGSRCARIFRLVLQKKHIEQKQVEDF 383
Query: 100 LRVVANSKESYELRYFQINQD 120
+ A KE+ ++ Y ++++
Sbjct: 384 AMIPA--KEAKDMLYKMLSEN 402
>gi|217330639 phosphoinositide-3-kinase, regulatory subunit 5 [Homo
sapiens]
Length = 880
Score = 26.9 bits (58), Expect = 4.4
Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 10/97 (10%)
Query: 32 GIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSKSKITVTSEVPFSKRYLKYLTKKYL 91
GI DAA ++L+ +++ G+ G + T + K T +P ++ Y Y
Sbjct: 242 GIGDAAEARRWLRTKLQAVGEKAGFPGVLDTAKPGKLH---TIPIPVARCYT------YS 292
Query: 92 KKNNLRDWLRVVANSKESYELRYFQINQDEEEEEDED 128
+ D L+ + KE L+ + DEEEEE+E+
Sbjct: 293 WSQDSFDILQEIL-LKEQELLQPGILGDDEEEEEEEE 328
>gi|217330622 phosphoinositide-3-kinase, regulatory subunit 5 [Homo
sapiens]
Length = 880
Score = 26.9 bits (58), Expect = 4.4
Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 10/97 (10%)
Query: 32 GIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSKSKITVTSEVPFSKRYLKYLTKKYL 91
GI DAA ++L+ +++ G+ G + T + K T +P ++ Y Y
Sbjct: 242 GIGDAAEARRWLRTKLQAVGEKAGFPGVLDTAKPGKLH---TIPIPVARCYT------YS 292
Query: 92 KKNNLRDWLRVVANSKESYELRYFQINQDEEEEEDED 128
+ D L+ + KE L+ + DEEEEE+E+
Sbjct: 293 WSQDSFDILQEIL-LKEQELLQPGILGDDEEEEEEEE 328
>gi|4826908 phosphoinositide-3-kinase, regulatory subunit 2 (beta)
[Homo sapiens]
Length = 728
Score = 26.6 bits (57), Expect = 5.7
Identities = 11/44 (25%), Positives = 24/44 (54%)
Query: 81 RYLKYLTKKYLKKNNLRDWLRVVANSKESYELRYFQINQDEEEE 124
+YL +LT+K ++ + +WL + +++ Y L + + EE
Sbjct: 576 QYLVWLTQKGARQKKINEWLGIKNETEDQYALMEDEDDLPHHEE 619
>gi|4557565 excision repair cross-complementing rodent repair
deficiency, complementation group 6 [Homo sapiens]
Length = 1493
Score = 26.6 bits (57), Expect = 5.7
Identities = 27/121 (22%), Positives = 50/121 (41%), Gaps = 28/121 (23%)
Query: 35 DAANFEQFLQERIKVNGKAGNLGGGVVTIERSKSKITVTSEVPFS--------------- 79
+A+ FE++L ++ K++ + G ++ + +T + V
Sbjct: 267 EASGFEKYLADQAKLSFERKKQGCNKRAARKAPAPVTPPAPVQNKNKPNKKARVLSKKEE 326
Query: 80 --KRYLKYLTKKYLKKNNL-------RDW---LRVVANS-KESYELRYFQINQDEEEEED 126
K+++K L K+ L+ R W +R A E E YF ++EEEE+D
Sbjct: 327 RLKKHIKKLQKRALQFQGKVGLPKARRPWESDMRPEAEGDSEGEESEYFPTEEEEEEEDD 386
Query: 127 E 127
E
Sbjct: 387 E 387
>gi|54607116 leiomodin 3 (fetal) [Homo sapiens]
Length = 560
Score = 26.6 bits (57), Expect = 5.7
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 8/50 (16%)
Query: 79 SKRYLKYLTKKYLKKNNLRDWLRVVANSKESYELRYFQINQDEEEEEDED 128
+K +YL +K NN +VAN +ES Q +E+EEE++D
Sbjct: 112 NKNMAQYLKEKL---NN-----EIVANKRESKGSSNIQETDEEDEEEEDD 153
>gi|51173735 ras responsive element binding protein 1 isoform 2
[Homo sapiens]
Length = 1687
Score = 26.2 bits (56), Expect = 7.4
Identities = 16/62 (25%), Positives = 26/62 (41%), Gaps = 9/62 (14%)
Query: 22 TLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSKSKITVTSEVPFSKR 81
TL C P + G + + F +A +LGG + + +K I S PF K
Sbjct: 395 TLKCQLPQDPGCTNLLSLSPF---------EAASLGGSLTVLPATKDSIKHLSLQPFQKG 445
Query: 82 YL 83
++
Sbjct: 446 FI 447
>gi|51173737 ras responsive element binding protein 1 isoform 1
[Homo sapiens]
Length = 1742
Score = 26.2 bits (56), Expect = 7.4
Identities = 16/62 (25%), Positives = 26/62 (41%), Gaps = 9/62 (14%)
Query: 22 TLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSKSKITVTSEVPFSKR 81
TL C P + G + + F +A +LGG + + +K I S PF K
Sbjct: 395 TLKCQLPQDPGCTNLLSLSPF---------EAASLGGSLTVLPATKDSIKHLSLQPFQKG 445
Query: 82 YL 83
++
Sbjct: 446 FI 447
>gi|4503257 death-domain associated protein isoform a [Homo sapiens]
Length = 740
Score = 25.8 bits (55), Expect = 9.7
Identities = 10/24 (41%), Positives = 17/24 (70%)
Query: 105 NSKESYELRYFQINQDEEEEEDED 128
+S+E +L Q Q+++EEEDE+
Sbjct: 460 DSEEEEDLEQMQEGQEDDEEEDEE 483
>gi|215422388 death-domain associated protein isoform a [Homo
sapiens]
Length = 740
Score = 25.8 bits (55), Expect = 9.7
Identities = 10/24 (41%), Positives = 17/24 (70%)
Query: 105 NSKESYELRYFQINQDEEEEEDED 128
+S+E +L Q Q+++EEEDE+
Sbjct: 460 DSEEEEDLEQMQEGQEDDEEEDEE 483
>gi|215422366 death-domain associated protein isoform b [Homo
sapiens]
Length = 752
Score = 25.8 bits (55), Expect = 9.7
Identities = 10/24 (41%), Positives = 17/24 (70%)
Query: 105 NSKESYELRYFQINQDEEEEEDED 128
+S+E +L Q Q+++EEEDE+
Sbjct: 472 DSEEEEDLEQMQEGQEDDEEEDEE 495
>gi|25777671 protein phosphatase 1, regulatory subunit 10 [Homo
sapiens]
Length = 940
Score = 25.8 bits (55), Expect = 9.7
Identities = 14/53 (26%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 61 VTIERSKSKITVTSEVPFSKRYLKYLTKKYLKKNNLRDWLRVVANSKESYELR 113
+T ++ + I + ++ + ++L LT +LK+NN ++ ++ S E ELR
Sbjct: 79 LTYSKTTNNIPLLQQILLTLQHLP-LTVDHLKQNNTAKLVKQLSKSSEDEELR 130
>gi|134304838 eukaryotic translation initiation factor 2-alpha
kinase 3 [Homo sapiens]
Length = 1116
Score = 25.8 bits (55), Expect = 9.7
Identities = 11/39 (28%), Positives = 19/39 (48%)
Query: 62 TIERSKSKITVTSEVPFSKRYLKYLTKKYLKKNNLRDWL 100
T+ +K T P S + Y+ + +K NL+DW+
Sbjct: 862 TLSLDLTKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWM 900
>gi|118150660 erythropoietin 4 immediate early response [Homo
sapiens]
Length = 426
Score = 25.8 bits (55), Expect = 9.7
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 12/76 (15%)
Query: 63 IERSKS-------KITVTSEVPFSKRYLKYLTKKY-----LKKNNLRDWLRVVANSKESY 110
IER +S KIT+ S + + KR + K +K + + +V + +E +
Sbjct: 236 IERERSALGPNVTKITLESFLAWKKRKRQEKIDKLEQDMERRKADFKAGKALVISGREVF 295
Query: 111 ELRYFQINQDEEEEED 126
E R +N D+EE +D
Sbjct: 296 EFRPELVNDDDEEADD 311
>gi|118766347 zinc finger CCCH-type domain containing 6 [Homo
sapiens]
Length = 1189
Score = 25.8 bits (55), Expect = 9.7
Identities = 23/97 (23%), Positives = 38/97 (39%), Gaps = 19/97 (19%)
Query: 29 VEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSKSKITVTSEVPFSKRYLKYLTK 88
+EDG +D A FE+ ++ K N K SE + K K+ +
Sbjct: 16 LEDGEIDDAGFEEIQEKEAKENEKQ-------------------KSEKAYRKSRKKHKKE 56
Query: 89 KYLKKNNLRDWLRVVANSKESYELRYFQINQDEEEEE 125
+ KK+ R + NS S + + ++ D E E
Sbjct: 57 REKKKSKRRKREKHKHNSPSSDDSSDYSLDSDVEHTE 93
>gi|23308693 zinc finger and BTB domain containing 9 [Homo sapiens]
Length = 473
Score = 25.8 bits (55), Expect = 9.7
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 102 VVANSKESYELRYFQINQDEEEEEDED 128
V E E+ Q+ ++EEEEED+D
Sbjct: 196 VGGEGSELGEVLQIQVEEEEEEEEDDD 222
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.133 0.368
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,574,309
Number of Sequences: 37866
Number of extensions: 176278
Number of successful extensions: 1006
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 979
Number of HSP's gapped (non-prelim): 37
length of query: 128
length of database: 18,247,518
effective HSP length: 90
effective length of query: 38
effective length of database: 14,839,578
effective search space: 563903964
effective search space used: 563903964
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Search text |
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.