Guide to the Human Genome
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Name: RPL22L1 Sequence: fasta or formatted (122aa) NCBI GI: 153791384
Description:

ribosomal protein L22-like 1

Referenced in:

Ribosomes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             1.6          2           1
 C cysteine            0.0          0           0
 D aspartate           7.4          9           1
 E glutamate           9.0         11           1
 F phenylalanine       5.7          7           1
 G glycine             4.1          5           1
 H histidine           1.6          2           1
 I isoleucine          3.3          4           1
 K lysine             13.1         16           2
 L leucine             8.2         10           1
 M methionine          0.8          1           1
 N asparagine          6.6          8           2
 P proline             2.5          3           1
 Q glutamine           4.1          5           1
 R arginine            7.4          9           1
 S serine              6.6          8           1
 T threonine           4.9          6           1
 V valine              7.4          9           2
 W tryptophan          1.6          2           1
 Y tyrosine            4.1          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ribosomal protein L22-like 1 
RPL22                 0.664   ribosomal protein L22 proprotein 
ANKRD12               0.022   ankyrin repeat domain 12 isoform 2 
ANKRD12               0.022   ankyrin repeat domain 12 isoform 1 
RGSL1                 0.018   regulator of G-protein signaling like 1 
PIK3R1                0.013   phosphoinositide-3-kinase, regulatory subunit 1 (alp...
PIK3R1                0.013   phosphoinositide-3-kinase, regulatory subunit 1 (alp...
PIK3R1                0.013   phosphoinositide-3-kinase, regulatory subunit 1 (alp...
MRPL20                0.013   mitochondrial ribosomal protein L20 
PIK3R2                0.009   phosphoinositide-3-kinase, regulatory subunit 2 (beta...
TRIP11                0.009   thyroid hormone receptor interactor 11 
RBM45                 0.009   RNA binding motif protein 45 
IL12RB2               0.004   interleukin 12 receptor, beta 2 precursor 
TSC22D1               0.004   TSC22 domain family, member 1 isoform 2 
LRRC48                0.004   leucine rich repeat containing 48 isoform b 
LRRC48                0.004   leucine rich repeat containing 48 isoform b 
LRRC48                0.004   leucine rich repeat containing 48 isoform a 
LRRC48                0.004   leucine rich repeat containing 48 isoform a 
CLSTN1                0.004   calsyntenin 1 isoform 1 
CLSTN1                0.004   calsyntenin 1 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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