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Search of human proteins with 4506371
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4506371 RAB5B, member RAS oncogene family [Homo sapiens]
(215 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4506371 RAB5B, member RAS oncogene family [Homo sapiens] 426 e-119
gi|41393614 RAB5C, member RAS oncogene family isoform a [Homo sa... 363 e-101
gi|41393545 RAB5C, member RAS oncogene family isoform b [Homo sa... 363 e-101
gi|19923262 RAB5A, member RAS oncogene family [Homo sapiens] 359 1e-99
gi|10190714 RAS-related protein RAB-22A [Homo sapiens] 187 4e-48
gi|33589861 RAB31, member RAS oncogene family [Homo sapiens] 177 8e-45
gi|11967981 RAB17, member RAS oncogene family [Homo sapiens] 168 4e-42
gi|4758988 RAB1A, member RAS oncogene family isoform 1 [Homo sap... 162 3e-40
gi|96975097 RAB6B, member RAS oncogene family [Homo sapiens] 160 6e-40
gi|190358517 RAB11B, member RAS oncogene family [Homo sapiens] 159 1e-39
gi|19923231 RAB6A, member RAS oncogene family isoform a [Homo sa... 159 2e-39
gi|13569962 RAB1B, member RAS oncogene family [Homo sapiens] 158 3e-39
gi|21361884 RAB2B protein isoform 1 [Homo sapiens] 158 4e-39
gi|7661922 RAB21, member RAS oncogene family [Homo sapiens] 158 4e-39
gi|38679888 RAB6A, member RAS oncogene family isoform b [Homo sa... 157 5e-39
gi|4758984 Ras-related protein Rab-11A [Homo sapiens] 155 3e-38
gi|4506365 RAB2A, member RAS oncogene family [Homo sapiens] 154 4e-38
gi|28376635 RAB37, member RAS oncogene family isoform 3 [Homo sa... 152 3e-37
gi|116812567 RAB25 [Homo sapiens] 152 3e-37
gi|4506363 RAB13, member RAS oncogene family [Homo sapiens] 150 1e-36
gi|19923483 GTPase Rab14 [Homo sapiens] 147 7e-36
gi|74096429 RAB41, member RAS oncogene family [Homo sapiens] 147 7e-36
gi|169204777 PREDICTED: similar to RAB13, member RAS oncogene fa... 146 1e-35
gi|169205558 PREDICTED: similar to hCG24991 [Homo sapiens] 146 1e-35
gi|169204174 PREDICTED: similar to hCG24991 [Homo sapiens] 146 1e-35
gi|117938299 RAB6C-like [Homo sapiens] 146 1e-35
gi|21361418 RAB30, member RAS oncogene family [Homo sapiens] 145 2e-35
gi|54859685 RAB37, member RAS oncogene family isoform 2 [Homo sa... 145 3e-35
gi|116875763 RAB6C, member RAS oncogene family [Homo sapiens] 145 3e-35
gi|16933567 mel transforming oncogene [Homo sapiens] 144 6e-35
>gi|4506371 RAB5B, member RAS oncogene family [Homo sapiens]
Length = 215
Score = 426 bits (1094), Expect = e-119
Identities = 215/215 (100%), Positives = 215/215 (100%)
Query: 1 MTSRSTARPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQ 60
MTSRSTARPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQ
Sbjct: 1 MTSRSTARPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQ 60
Query: 61 SVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQR 120
SVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQR
Sbjct: 61 SVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQR 120
Query: 121 QASPSIVIALAGNKADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKK 180
QASPSIVIALAGNKADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKK
Sbjct: 121 QASPSIVIALAGNKADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKK 180
Query: 181 LPKSEPQNLGGAAGRSRGVDLHEQSQQNKSQCCSN 215
LPKSEPQNLGGAAGRSRGVDLHEQSQQNKSQCCSN
Sbjct: 181 LPKSEPQNLGGAAGRSRGVDLHEQSQQNKSQCCSN 215
>gi|41393614 RAB5C, member RAS oncogene family isoform a [Homo
sapiens]
Length = 216
Score = 363 bits (933), Expect = e-101
Identities = 180/209 (86%), Positives = 195/209 (93%)
Query: 7 ARPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDD 66
ARPNG +KICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQ+VCLDD
Sbjct: 8 ARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDD 67
Query: 67 TTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSI 126
TTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN +TFARAK WVKELQRQASP+I
Sbjct: 68 TTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNI 127
Query: 127 VIALAGNKADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSEP 186
VIALAGNKADLA+KR VE++EAQAYADDNSLLFMETSAKTAMNVN++F+AIAKKLPK+EP
Sbjct: 128 VIALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEP 187
Query: 187 QNLGGAAGRSRGVDLHEQSQQNKSQCCSN 215
QN GA GR+RGVDL E + ++SQCCSN
Sbjct: 188 QNATGAPGRNRGVDLQENNPASRSQCCSN 216
>gi|41393545 RAB5C, member RAS oncogene family isoform b [Homo
sapiens]
Length = 216
Score = 363 bits (933), Expect = e-101
Identities = 180/209 (86%), Positives = 195/209 (93%)
Query: 7 ARPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDD 66
ARPNG +KICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQ+VCLDD
Sbjct: 8 ARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDD 67
Query: 67 TTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSI 126
TTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN +TFARAK WVKELQRQASP+I
Sbjct: 68 TTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNI 127
Query: 127 VIALAGNKADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSEP 186
VIALAGNKADLA+KR VE++EAQAYADDNSLLFMETSAKTAMNVN++F+AIAKKLPK+EP
Sbjct: 128 VIALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEP 187
Query: 187 QNLGGAAGRSRGVDLHEQSQQNKSQCCSN 215
QN GA GR+RGVDL E + ++SQCCSN
Sbjct: 188 QNATGAPGRNRGVDLQENNPASRSQCCSN 216
>gi|19923262 RAB5A, member RAS oncogene family [Homo sapiens]
Length = 215
Score = 359 bits (921), Expect = 1e-99
Identities = 176/215 (81%), Positives = 196/215 (91%)
Query: 1 MTSRSTARPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQ 60
M SR RPNG +KICQFKLVLLGESAVGKSSLVLRFVKGQFHE+QESTIGAAFLTQ
Sbjct: 1 MASRGATRPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQ 60
Query: 61 SVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQR 120
+VCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN+E+FARAK WVKELQR
Sbjct: 61 TVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQR 120
Query: 121 QASPSIVIALAGNKADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKK 180
QASP+IVIAL+GNKADLANKR V+++EAQ+YADDNSLLFMETSAKT+MNVN++F+AIAKK
Sbjct: 121 QASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKK 180
Query: 181 LPKSEPQNLGGAAGRSRGVDLHEQSQQNKSQCCSN 215
LPK+EPQN G + R RGVDL E +Q ++QCCSN
Sbjct: 181 LPKNEPQNPGANSARGRGVDLTEPTQPTRNQCCSN 215
>gi|10190714 RAS-related protein RAB-22A [Homo sapiens]
Length = 194
Score = 187 bits (476), Expect = 4e-48
Identities = 93/194 (47%), Positives = 132/194 (68%), Gaps = 4/194 (2%)
Query: 20 QFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQ 79
+ K+ LLG++ VGKSS+V RFV+ F TIGA+F+T++V + KF IWDTAGQ
Sbjct: 5 ELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQ 64
Query: 80 ERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLAN 139
ER+ +LAPMYYRG+ AAI+VYDIT +ETF+ K WVKEL++ P+IV+A+AGNK DL +
Sbjct: 65 ERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLID 124
Query: 140 KRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSEPQNLGGAAGRSRGV 199
R V +A+ YAD +F+ETSAK A+N+N+LF+ I++++P ++ G +G
Sbjct: 125 VREVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRIPSTDANLPSG----GKGF 180
Query: 200 DLHEQSQQNKSQCC 213
L Q + K CC
Sbjct: 181 KLRRQPSEPKRSCC 194
>gi|33589861 RAB31, member RAS oncogene family [Homo sapiens]
Length = 195
Score = 177 bits (448), Expect = 8e-45
Identities = 88/196 (44%), Positives = 131/196 (66%), Gaps = 4/196 (2%)
Query: 18 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTA 77
I + K+ LLG++ VGKSS+V RFV+ F TIGA+F+T++V + KF IWDTA
Sbjct: 4 IRELKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTA 63
Query: 78 GQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADL 137
GQER+HSLAPMYYRG+ AA++VYDIT Q++F K WVKEL+ +IV+A+AGNK DL
Sbjct: 64 GQERFHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKCDL 123
Query: 138 ANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSEPQNLGGAAGRSR 197
++ R V ++A+ YA+ + +ETSAK A+N+ +LF I++++P +P G +
Sbjct: 124 SDIREVPLKDAKEYAESIGAIVVETSAKNAINIEELFQGISRQIPPLDPHE----NGNNG 179
Query: 198 GVDLHEQSQQNKSQCC 213
+ + + + Q +CC
Sbjct: 180 TIKVEKPTMQASRRCC 195
>gi|11967981 RAB17, member RAS oncogene family [Homo sapiens]
Length = 212
Score = 168 bits (425), Expect = 4e-42
Identities = 87/211 (41%), Positives = 135/211 (63%), Gaps = 6/211 (2%)
Query: 6 TARPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLD 65
T +P P ++ FKLVLLG +VGKSSL LR+VK F T+G AF T+ V +
Sbjct: 7 TPQPRAAPSQPRV--FKLVLLGSGSVGKSSLALRYVKNDFKSILP-TVGCAFFTKVVDVG 63
Query: 66 DTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASP- 124
T++K EIWDTAGQE+YHS+ +Y+RGA AA++VYDIT +++F +A+ W+K+L+ + P
Sbjct: 64 ATSLKLEIWDTAGQEKYHSVCHLYFRGANAALLVYDITRKDSFLKAQQWLKDLEEELHPG 123
Query: 125 SIVIALAGNKADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKS 184
+++ L GNK DL+ +R V ++E + +AD LLFMETSAK V+++F +A++L +
Sbjct: 124 EVLVMLVGNKTDLSQEREVTFQEGKEFADSQKLLFMETSAKLNHQVSEVFNTVAQELLQR 183
Query: 185 EPQNLGGAAGRSRGVDLHEQSQQNKSQCCSN 215
+ G A R + +++CC++
Sbjct: 184 SDEE--GQALRGDAAVALNKGPARQAKCCAH 212
>gi|4758988 RAB1A, member RAS oncogene family isoform 1 [Homo
sapiens]
Length = 205
Score = 162 bits (409), Expect = 3e-40
Identities = 85/196 (43%), Positives = 122/196 (62%), Gaps = 5/196 (2%)
Query: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQE 80
FKL+L+G+S VGKS L+LRF + E STIG F +++ LD T+K +IWDTAGQE
Sbjct: 12 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQE 71
Query: 81 RYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANK 140
R+ ++ YYRGA IVVYD+T+QE+F K W++E+ R AS ++ L GNK DL K
Sbjct: 72 RFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTK 131
Query: 141 RMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSEPQNLGGAAGRSRGVD 200
++V+Y A+ +AD + F+ETSAK A NV F+ +A ++ K G AG + +
Sbjct: 132 KVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKR--MGPGATAGGAEKSN 189
Query: 201 LHEQS---QQNKSQCC 213
+ QS +Q+ CC
Sbjct: 190 VKIQSTPVKQSGGGCC 205
>gi|96975097 RAB6B, member RAS oncogene family [Homo sapiens]
Length = 208
Score = 160 bits (406), Expect = 6e-40
Identities = 76/166 (45%), Positives = 111/166 (66%)
Query: 20 QFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQ 79
+FKLV LGE +VGK+SL+ RF+ F ++TIG FL++++ L+D TV+ ++WDTAGQ
Sbjct: 13 KFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 72
Query: 80 ERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLAN 139
ER+ SL P Y R + A+VVYDITN +F + W+ +++ + ++I L GNK DLA+
Sbjct: 73 ERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKTDLAD 132
Query: 140 KRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSE 185
KR + EE + A + S++F+ETSAKT NV LF +A LP E
Sbjct: 133 KRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVASALPGME 178
>gi|190358517 RAB11B, member RAS oncogene family [Homo sapiens]
Length = 218
Score = 159 bits (403), Expect = 1e-39
Identities = 90/206 (43%), Positives = 130/206 (63%), Gaps = 11/206 (5%)
Query: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQE 80
FK+VL+G+S VGKS+L+ RF + +F+ +STIG F T+S+ +D T+K +IWDTAGQE
Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 71
Query: 81 RYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANK 140
RY ++ YYRGA A++VYDI T+ + W+KEL+ A +IVI L GNK+DL +
Sbjct: 72 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHL 131
Query: 141 RMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPK--SEPQNLGGAA-GRSR 197
R V +EA+A+A+ N+L F+ETSA + NV + F I ++ + S+ Q AA S
Sbjct: 132 RAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRAAHDESP 191
Query: 198 G---VDLH-----EQSQQNKSQCCSN 215
G VD+ + + NK QCC N
Sbjct: 192 GNNVVDISVPPTTDGQKPNKLQCCQN 217
>gi|19923231 RAB6A, member RAS oncogene family isoform a [Homo
sapiens]
Length = 208
Score = 159 bits (401), Expect = 2e-39
Identities = 75/166 (45%), Positives = 111/166 (66%)
Query: 20 QFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQ 79
+FKLV LGE +VGK+SL+ RF+ F ++TIG FL++++ L+D T++ ++WDTAGQ
Sbjct: 13 KFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAGQ 72
Query: 80 ERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLAN 139
ER+ SL P Y R + AA+VVYDITN +F + W+ +++ + ++I L GNK DLA+
Sbjct: 73 ERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDLAD 132
Query: 140 KRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSE 185
KR V EE + A + +++F+ETSAK NV LF +A LP E
Sbjct: 133 KRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGME 178
>gi|13569962 RAB1B, member RAS oncogene family [Homo sapiens]
Length = 201
Score = 158 bits (400), Expect = 3e-39
Identities = 80/177 (45%), Positives = 115/177 (64%), Gaps = 2/177 (1%)
Query: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQE 80
FKL+L+G+S VGKS L+LRF + E STIG F +++ LD T+K +IWDTAGQE
Sbjct: 9 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQE 68
Query: 81 RYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANK 140
R+ ++ YYRGA IVVYD+T+QE++A K W++E+ R AS ++ L GNK+DL K
Sbjct: 69 RFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTK 128
Query: 141 RMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSEPQNLGGAAGRSR 197
++V+ A+ +AD + F+ETSAK A NV F+ +A ++ K G A+G R
Sbjct: 129 KVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKR--MGPGAASGGER 183
>gi|21361884 RAB2B protein isoform 1 [Homo sapiens]
Length = 216
Score = 158 bits (399), Expect = 4e-39
Identities = 77/190 (40%), Positives = 122/190 (64%)
Query: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQE 80
FK +++G++ VGKS L+L+F +F + TIG F + V +D +K +IWDTAGQE
Sbjct: 7 FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAGQE 66
Query: 81 RYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANK 140
+ S+ YYRGA A++VYDIT +ETF +W+++ ++ +S ++VI L GNK+DL ++
Sbjct: 67 SFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSDLESR 126
Query: 141 RMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSEPQNLGGAAGRSRGVD 200
R V+ EE +A+A ++ L+FMETSAKTA NV + F+ AK++ + Q L + G+
Sbjct: 127 RDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRKIQQGLFDVHNEANGIK 186
Query: 201 LHEQSQQNKS 210
+ Q + S
Sbjct: 187 IGPQQSISTS 196
>gi|7661922 RAB21, member RAS oncogene family [Homo sapiens]
Length = 225
Score = 158 bits (399), Expect = 4e-39
Identities = 83/215 (38%), Positives = 127/215 (59%), Gaps = 10/215 (4%)
Query: 11 GQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVK 70
G A + FK+VLLGE VGK+SLVLR+ + +F++ +T+ A+FLT+ + + V
Sbjct: 10 GAAAAGRAYSFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVN 69
Query: 71 FEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIAL 130
IWDTAGQER+H+L P+YYR + AI+VYDIT++++F + K WVKEL++ I + +
Sbjct: 70 LAIWDTAGQERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCI 129
Query: 131 AGNKADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKL--------- 181
GNK DL +R V +EA++YA+ TSAK + +LFL + K++
Sbjct: 130 VGNKIDLEKERHVSIQEAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDER 189
Query: 182 PKSEPQNLGGAAGRS-RGVDLHEQSQQNKSQCCSN 215
K + G A R + +D Q+Q + CCS+
Sbjct: 190 AKGNGSSQPGTARRGVQIIDDEPQAQTSGGGCCSS 224
>gi|38679888 RAB6A, member RAS oncogene family isoform b [Homo
sapiens]
Length = 208
Score = 157 bits (398), Expect = 5e-39
Identities = 75/166 (45%), Positives = 110/166 (66%)
Query: 20 QFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQ 79
+FKLV LGE +VGK+SL+ RF+ F ++TIG FL++++ L+D TV+ ++WDTAGQ
Sbjct: 13 KFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 72
Query: 80 ERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLAN 139
ER+ SL P Y R + A+VVYDITN +F + W+ +++ + ++I L GNK DLA+
Sbjct: 73 ERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDLAD 132
Query: 140 KRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSE 185
KR V EE + A + +++F+ETSAK NV LF +A LP E
Sbjct: 133 KRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGME 178
>gi|4758984 Ras-related protein Rab-11A [Homo sapiens]
Length = 216
Score = 155 bits (391), Expect = 3e-38
Identities = 84/204 (41%), Positives = 122/204 (59%), Gaps = 9/204 (4%)
Query: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQE 80
FK+VL+G+S VGKS+L+ RF + +F+ +STIG F T+S+ +D T+K +IWDTAGQE
Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 71
Query: 81 RYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANK 140
RY ++ YYRGA A++VYDI T+ + W+KEL+ A +IVI L GNK+DL +
Sbjct: 72 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHL 131
Query: 141 RMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSEPQNL------GGAAG 194
R V +EA+A+A+ N L F+ETSA + NV F I ++ + Q +
Sbjct: 132 RAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDRRENDMSP 191
Query: 195 RSRGVDLH---EQSQQNKSQCCSN 215
+ V +H + K QCC N
Sbjct: 192 SNNVVPIHVPPTTENKPKVQCCQN 215
>gi|4506365 RAB2A, member RAS oncogene family [Homo sapiens]
Length = 212
Score = 154 bits (390), Expect = 4e-38
Identities = 72/184 (39%), Positives = 120/184 (65%)
Query: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQE 80
FK +++G++ VGKS L+L+F +F + TIG F + + +D +K +IWDTAGQE
Sbjct: 7 FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQE 66
Query: 81 RYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANK 140
+ S+ YYRGA A++VYDIT ++TF TW+++ ++ ++ ++VI L GNK+DL ++
Sbjct: 67 SFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESR 126
Query: 141 RMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSEPQNLGGAAGRSRGVD 200
R V+ EE +A+A ++ L+FMETSAKTA NV + F+ AK++ + + + + G+
Sbjct: 127 REVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINNEANGIK 186
Query: 201 LHEQ 204
+ Q
Sbjct: 187 IGPQ 190
>gi|28376635 RAB37, member RAS oncogene family isoform 3 [Homo
sapiens]
Length = 216
Score = 152 bits (383), Expect = 3e-37
Identities = 80/194 (41%), Positives = 122/194 (62%), Gaps = 4/194 (2%)
Query: 22 KLVLLGESAVGKSSLVLRFVKGQFHEYQES-TIGAAFLTQSVCLDDTTVKFEIWDTAGQE 80
K +L+G+S VGK+SL+++F +G+F S T+G F + V +D VK +IWDTAGQE
Sbjct: 24 KTILVGDSGVGKTSLLVQFDQGKFIPGSFSATVGIGFTNKVVTVDGVRVKLQIWDTAGQE 83
Query: 81 RYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANK 140
R+ S+ YYR AQA +++YDITN+ +F + W+ E+ A +VI L GNKAD++++
Sbjct: 84 RFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIMLLGNKADMSSE 143
Query: 141 RMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSEPQNLGGAAGRSRGVD 200
R++ E+ + A + + F+ETSAKT MNV FLAIAK+L + + R
Sbjct: 144 RVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIAKELKYRAGHQADEPSFQIRD-- 201
Query: 201 LHEQSQQNKSQCCS 214
+ +SQ+ +S CCS
Sbjct: 202 -YVESQKKRSSCCS 214
>gi|116812567 RAB25 [Homo sapiens]
Length = 213
Score = 152 bits (383), Expect = 3e-37
Identities = 74/161 (45%), Positives = 108/161 (67%)
Query: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQE 80
FK+VL+GES VGK++L+ RF + +F +TIG F T++V L VK +IWDTAG E
Sbjct: 13 FKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLE 72
Query: 81 RYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANK 140
RY ++ YYRGA A++V+D+T +T+A + W+KEL A +IV+ L GNK+DL+
Sbjct: 73 RYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQA 132
Query: 141 RMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKL 181
R V EEA+ +A++N LLF+ETSA + NV F + K++
Sbjct: 133 REVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEI 173
>gi|4506363 RAB13, member RAS oncogene family [Homo sapiens]
Length = 203
Score = 150 bits (378), Expect = 1e-36
Identities = 71/192 (36%), Positives = 118/192 (61%)
Query: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQE 80
FKL+L+G+S VGK+ L++RF + F+ STIG F ++V ++ +K ++WDTAGQE
Sbjct: 9 FKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQE 68
Query: 81 RYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANK 140
R+ ++ YYRGA I+VYDIT++++F + W+K ++ AS + L GNK D+ K
Sbjct: 69 RFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAK 128
Query: 141 RMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSEPQNLGGAAGRSRGVD 200
R V+ E+A A ++ + F ETSAK++MNV++ F ++A+ + G + D
Sbjct: 129 RKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGRRSGNGNKPPSTD 188
Query: 201 LHEQSQQNKSQC 212
L ++N ++C
Sbjct: 189 LKTCDKKNTNKC 200
>gi|19923483 GTPase Rab14 [Homo sapiens]
Length = 215
Score = 147 bits (371), Expect = 7e-36
Identities = 72/161 (44%), Positives = 105/161 (65%)
Query: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQE 80
FK +++G+ VGKS L+ +F + +F TIG F T+ + + +K +IWDTAGQE
Sbjct: 12 FKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQE 71
Query: 81 RYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANK 140
R+ ++ YYRGA A++VYDIT + T+ +W+ + + +P+ VI L GNKADL +
Sbjct: 72 RFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKADLEAQ 131
Query: 141 RMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKL 181
R V YEEA+ +A++N LLF+E SAKT NV D FL AKK+
Sbjct: 132 RDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKI 172
>gi|74096429 RAB41, member RAS oncogene family [Homo sapiens]
Length = 222
Score = 147 bits (371), Expect = 7e-36
Identities = 71/164 (43%), Positives = 108/164 (65%)
Query: 18 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTA 77
+C+ KL+ LGE +VGK+S++ RF+ F ++T+G FL++++ L+D V+ ++WDTA
Sbjct: 29 LCKSKLLFLGEQSVGKTSIISRFMYNSFGCACQATVGIDFLSKTMYLEDQIVQLQLWDTA 88
Query: 78 GQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADL 137
GQER+HSL P Y R + A+VVYDITN +F WV+ ++ + +VI L GNK DL
Sbjct: 89 GQERFHSLIPSYIRDSTIAVVVYDITNINSFKETDKWVEHVRAERGDDVVIMLLGNKIDL 148
Query: 138 ANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKL 181
NKR V E+ + + + +++F+ETSAKT NV LF +A L
Sbjct: 149 DNKRQVTAEQGEEKSRNLNVMFIETSAKTGYNVKKLFRRVASAL 192
>gi|169204777 PREDICTED: similar to RAB13, member RAS oncogene
family [Homo sapiens]
Length = 327
Score = 146 bits (369), Expect = 1e-35
Identities = 70/192 (36%), Positives = 115/192 (59%)
Query: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQE 80
FKL+L+G+S VGK+ L++RF + F+ STIG F ++V ++ +K ++WDTAGQE
Sbjct: 133 FKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQE 192
Query: 81 RYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANK 140
R+ ++ YYRGA I+ YDIT++++F + W+K + AS + L GNK D+ K
Sbjct: 193 RFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENASAGVEHLLLGNKCDMEAK 252
Query: 141 RMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSEPQNLGGAAGRSRGVD 200
R V+ E+A A ++ + F ETSAK++MNV++ F ++A+ + G + D
Sbjct: 253 RKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGRRSGNGNKPPSTD 312
Query: 201 LHEQSQQNKSQC 212
L +N ++C
Sbjct: 313 LKTCDIKNTNKC 324
>gi|169205558 PREDICTED: similar to hCG24991 [Homo sapiens]
Length = 327
Score = 146 bits (369), Expect = 1e-35
Identities = 70/192 (36%), Positives = 115/192 (59%)
Query: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQE 80
FKL+L+G+S VGK+ L++RF + F+ STIG F ++V ++ +K ++WDTAGQE
Sbjct: 133 FKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQE 192
Query: 81 RYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANK 140
R+ ++ YYRGA I+ YDIT++++F + W+K + AS + L GNK D+ K
Sbjct: 193 RFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENASAGVEHLLLGNKCDMEAK 252
Query: 141 RMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSEPQNLGGAAGRSRGVD 200
R V+ E+A A ++ + F ETSAK++MNV++ F ++A+ + G + D
Sbjct: 253 RKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGRRSGNGNKPPSTD 312
Query: 201 LHEQSQQNKSQC 212
L +N ++C
Sbjct: 313 LKTCDIKNTNKC 324
>gi|169204174 PREDICTED: similar to hCG24991 [Homo sapiens]
Length = 327
Score = 146 bits (369), Expect = 1e-35
Identities = 70/192 (36%), Positives = 115/192 (59%)
Query: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQE 80
FKL+L+G+S VGK+ L++RF + F+ STIG F ++V ++ +K ++WDTAGQE
Sbjct: 133 FKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQE 192
Query: 81 RYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANK 140
R+ ++ YYRGA I+ YDIT++++F + W+K + AS + L GNK D+ K
Sbjct: 193 RFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENASAGVEHLLLGNKCDMEAK 252
Query: 141 RMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSEPQNLGGAAGRSRGVD 200
R V+ E+A A ++ + F ETSAK++MNV++ F ++A+ + G + D
Sbjct: 253 RKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGRRSGNGNKPPSTD 312
Query: 201 LHEQSQQNKSQC 212
L +N ++C
Sbjct: 313 LKTCDIKNTNKC 324
>gi|117938299 RAB6C-like [Homo sapiens]
Length = 254
Score = 146 bits (369), Expect = 1e-35
Identities = 77/192 (40%), Positives = 111/192 (57%), Gaps = 1/192 (0%)
Query: 20 QFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQ 79
+FKLV LGE +V K+SL+ RF F ++ IG FL++++ L+D T+ +WDTAGQ
Sbjct: 13 KFKLVFLGEQSVAKTSLITRFRYDSFDNTYQAIIGIDFLSKTMYLEDGTIGLRLWDTAGQ 72
Query: 80 ERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLAN 139
ER SL P Y R + AA+VVYDITN +F + W+ +++ + ++I L GNK DLA+
Sbjct: 73 ERLRSLIPRYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTEGGSDVIITLVGNKTDLAD 132
Query: 140 KRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSEPQNLGGAAGRSRGV 199
KR V EE + A ++ F+ET AK NV LF +A LP E G S +
Sbjct: 133 KRQVSIEEGERKAKGLNVTFIETRAKAGYNVKQLFRRVAAALPGMESTQDGSREDMS-DI 191
Query: 200 DLHEQSQQNKSQ 211
L + +Q S+
Sbjct: 192 KLEKPQEQTVSE 203
>gi|21361418 RAB30, member RAS oncogene family [Homo sapiens]
Length = 203
Score = 145 bits (367), Expect = 2e-35
Identities = 72/168 (42%), Positives = 108/168 (64%)
Query: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQE 80
FK+VL+G + VGK+ LV RF +G F Q +TIG F+ ++V ++ VK +IWDTAGQE
Sbjct: 10 FKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQE 69
Query: 81 RYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANK 140
R+ S+ YYR A A I+ YDIT +E+F W++E+++ AS ++ L GNK DLA +
Sbjct: 70 RFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKIDLAER 129
Query: 141 RMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSEPQN 188
R V + A+ +++ + ++ETSAK + NV LFL +A +L QN
Sbjct: 130 REVSQQRAEEFSEAQDMYYLETSAKESDNVEKLFLDLACRLISEARQN 177
>gi|54859685 RAB37, member RAS oncogene family isoform 2 [Homo
sapiens]
Length = 223
Score = 145 bits (366), Expect = 3e-35
Identities = 77/194 (39%), Positives = 119/194 (61%), Gaps = 4/194 (2%)
Query: 22 KLVLLGESAVGKSSLVLRFVKGQFHEYQE-STIGAAFLTQSVCLDDTTVKFEIWDTAGQE 80
K++LLG++ VGK+ +++F G F +T+G F + V +D VK +IWDTAGQE
Sbjct: 31 KVMLLGDTGVGKTCFLIQFKDGAFLSGTFIATVGIDFRNKVVTVDGVRVKLQIWDTAGQE 90
Query: 81 RYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANK 140
R+ S+ YYR AQA +++YDITN+ +F + W+ E+ A +VI L GNKAD++++
Sbjct: 91 RFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIMLLGNKADMSSE 150
Query: 141 RMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSEPQNLGGAAGRSRGVD 200
R++ E+ + A + + F+ETSAKT MNV FLAIAK+L + + R
Sbjct: 151 RVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIAKELKYRAGHQADEPSFQIRD-- 208
Query: 201 LHEQSQQNKSQCCS 214
+ +SQ+ +S CCS
Sbjct: 209 -YVESQKKRSSCCS 221
>gi|116875763 RAB6C, member RAS oncogene family [Homo sapiens]
Length = 254
Score = 145 bits (365), Expect = 3e-35
Identities = 76/192 (39%), Positives = 111/192 (57%), Gaps = 1/192 (0%)
Query: 20 QFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQ 79
+FKLV LGE +V K+SL+ RF F ++ IG FL++++ L+D T+ +WDTAGQ
Sbjct: 13 KFKLVFLGEQSVAKTSLITRFRYDSFDNTYQAIIGIDFLSKTMYLEDGTIGLRLWDTAGQ 72
Query: 80 ERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLAN 139
ER SL P Y R + AA+VVYDITN +F + W+ +++ + ++I L GN+ DLA+
Sbjct: 73 ERLRSLIPRYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIITLVGNRTDLAD 132
Query: 140 KRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSEPQNLGGAAGRSRGV 199
KR V EE + A ++ F+ET AK NV LF +A LP E G S +
Sbjct: 133 KRQVSVEEGERKAKGLNVTFIETRAKAGYNVKQLFRRVAAALPGMESTQDGSREDMS-DI 191
Query: 200 DLHEQSQQNKSQ 211
L + +Q S+
Sbjct: 192 KLEKPQEQTVSE 203
>gi|16933567 mel transforming oncogene [Homo sapiens]
Length = 207
Score = 144 bits (363), Expect = 6e-35
Identities = 72/192 (37%), Positives = 115/192 (59%), Gaps = 2/192 (1%)
Query: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQE 80
FKL+L+G+S VGK+ ++ RF + F+ STIG F +++ LD +K +IWDTAGQE
Sbjct: 9 FKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQE 68
Query: 81 RYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANK 140
R+ ++ YYRGA ++VYDITN+++F + W++ ++ AS + + GNK D+ +K
Sbjct: 69 RFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDK 128
Query: 141 RMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSEPQNLGGAA--GRSRG 198
R V E + A D + FMETSAK +NV + F +A+ + + L G + G ++G
Sbjct: 129 RQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSPQGSNQG 188
Query: 199 VDLHEQSQQNKS 210
V + Q+ S
Sbjct: 189 VKITPDQQKRSS 200
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.127 0.359
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,900,558
Number of Sequences: 37866
Number of extensions: 242918
Number of successful extensions: 1001
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 215
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 618
Number of HSP's gapped (non-prelim): 236
length of query: 215
length of database: 18,247,518
effective HSP length: 98
effective length of query: 117
effective length of database: 14,536,650
effective search space: 1700788050
effective search space used: 1700788050
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.