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Search of human proteins with 4505773
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4505773 prohibitin [Homo sapiens]
(272 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4505773 prohibitin [Homo sapiens] 519 e-147
gi|6005854 prohibitin 2 isoform 2 [Homo sapiens] 257 7e-69
gi|221307584 prohibitin 2 isoform 1 [Homo sapiens] 257 7e-69
gi|38016911 stomatin isoform a [Homo sapiens] 48 8e-06
gi|239746652 PREDICTED: hypothetical protein [Homo sapiens] 33 0.20
gi|221316744 stomatin-like 3 isoform 2 [Homo sapiens] 33 0.27
gi|21686995 stomatin-like 3 isoform 1 [Homo sapiens] 33 0.27
gi|41322923 plectin 1 isoform 11 [Homo sapiens] 32 0.45
gi|41322914 plectin 1 isoform 10 [Homo sapiens] 32 0.45
gi|41322919 plectin 1 isoform 8 [Homo sapiens] 32 0.45
gi|41322910 plectin 1 isoform 7 [Homo sapiens] 32 0.45
gi|41322916 plectin 1 isoform 6 [Homo sapiens] 32 0.45
gi|41322908 plectin 1 isoform 3 [Homo sapiens] 32 0.45
gi|41322912 plectin 1 isoform 2 [Homo sapiens] 32 0.45
gi|47607492 plectin 1 isoform 1 [Homo sapiens] 32 0.45
gi|197927452 dynein, axonemal, heavy chain 1 [Homo sapiens] 32 0.77
gi|239757639 PREDICTED: similar to collagen, type I, alpha 2 [Ho... 31 1.3
gi|156104874 envoplakin [Homo sapiens] 31 1.3
gi|219521893 coiled-coil transcriptional coactivator isoform 2 [... 29 3.8
gi|134152708 arginine and glutamate rich 1 [Homo sapiens] 29 3.8
gi|110815815 centlein isoform 1 [Homo sapiens] 29 3.8
gi|167555106 centlein isoform 2 [Homo sapiens] 29 3.8
gi|7305503 stomatin (EPB72)-like 2 [Homo sapiens] 29 5.0
gi|13376810 enhancer of polycomb 1 [Homo sapiens] 28 6.5
gi|190684710 EFR3 homolog B [Homo sapiens] 28 6.5
gi|187607445 hypothetical protein LOC79137 [Homo sapiens] 28 6.5
gi|219842214 protein phosphatase 1, regulatory (inhibitor) subun... 28 8.5
gi|219842212 protein phosphatase 1, regulatory (inhibitor) subun... 28 8.5
gi|4505317 protein phosphatase 1, regulatory (inhibitor) subunit... 28 8.5
gi|51093836 hypothetical protein LOC126859 isoform 1 [Homo sapiens] 28 8.5
>gi|4505773 prohibitin [Homo sapiens]
Length = 272
Score = 519 bits (1336), Expect = e-147
Identities = 272/272 (100%), Positives = 272/272 (100%)
Query: 1 MAAKVFESIGKFGLALAVAGGVVNSALYNVDAGHRAVIFDRFRGVQDIVVGEGTHFLIPW 60
MAAKVFESIGKFGLALAVAGGVVNSALYNVDAGHRAVIFDRFRGVQDIVVGEGTHFLIPW
Sbjct: 1 MAAKVFESIGKFGLALAVAGGVVNSALYNVDAGHRAVIFDRFRGVQDIVVGEGTHFLIPW 60
Query: 61 VQKPIIFDCRSRPRNVPVITGSKDLQNVNITLRILFRPVASQLPRIFTSIGEDYDERVLP 120
VQKPIIFDCRSRPRNVPVITGSKDLQNVNITLRILFRPVASQLPRIFTSIGEDYDERVLP
Sbjct: 61 VQKPIIFDCRSRPRNVPVITGSKDLQNVNITLRILFRPVASQLPRIFTSIGEDYDERVLP 120
Query: 121 SITTEILKSVVARFDAGELITQRELVSRQVSDDLTERAATFGLILDDVSLTHLTFGKEFT 180
SITTEILKSVVARFDAGELITQRELVSRQVSDDLTERAATFGLILDDVSLTHLTFGKEFT
Sbjct: 121 SITTEILKSVVARFDAGELITQRELVSRQVSDDLTERAATFGLILDDVSLTHLTFGKEFT 180
Query: 181 EAVEAKQVAQQEAERARFVVEKAEQQKKAAIISAEGDSKAAELIANSLATAGDGLIELRK 240
EAVEAKQVAQQEAERARFVVEKAEQQKKAAIISAEGDSKAAELIANSLATAGDGLIELRK
Sbjct: 181 EAVEAKQVAQQEAERARFVVEKAEQQKKAAIISAEGDSKAAELIANSLATAGDGLIELRK 240
Query: 241 LEAAEDIAYQLSRSRNITYLPAGQSVLLQLPQ 272
LEAAEDIAYQLSRSRNITYLPAGQSVLLQLPQ
Sbjct: 241 LEAAEDIAYQLSRSRNITYLPAGQSVLLQLPQ 272
>gi|6005854 prohibitin 2 isoform 2 [Homo sapiens]
Length = 299
Score = 257 bits (657), Expect = 7e-69
Identities = 136/252 (53%), Positives = 188/252 (74%), Gaps = 3/252 (1%)
Query: 17 AVAGGVVNSALYNVDAGHRAVIFDRFRGVQ-DIVVGEGTHFLIPWVQKPIIFDCRSRPRN 75
AVA GV S ++ V+ GHRA+ F+R GVQ D ++ EG HF IPW Q PII+D R+RPR
Sbjct: 31 AVAYGVRES-VFTVEGGHRAIFFNRIGGVQQDTILAEGLHFRIPWFQYPIIYDIRARPRK 89
Query: 76 VPVITGSKDLQNVNITLRILFRPVASQLPRIFTSIGEDYDERVLPSITTEILKSVVARFD 135
+ TGSKDLQ VNI+LR+L RP A +LP ++ +G DY+ERVLPSI E+LKSVVA+F+
Sbjct: 90 ISSPTGSKDLQMVNISLRVLSRPNAQELPSMYQRLGLDYEERVLPSIVNEVLKSVVAKFN 149
Query: 136 AGELITQRELVSRQVSDDLTERAATFGLILDDVSLTHLTFGKEFTEAVEAKQVAQQEAER 195
A +LITQR VS + +LTERA F LILDDV++T L+F +E+T AVEAKQVAQQEA+R
Sbjct: 150 ASQLITQRAQVSLLIRRELTERAKDFSLILDDVAITELSFSREYTAAVEAKQVAQQEAQR 209
Query: 196 ARFVVEKAEQQKKAAIISAEGDSKAAELIANSLATAGDGLIELRKLEAAEDIAYQLSRSR 255
A+F+VEKA+Q+++ I+ AEG+++AA+++ +L + G I+LRK+ AA++I+ ++ S+
Sbjct: 210 AQFLVEKAKQEQRQKIVQAEGEAEAAKMLGEAL-SKNPGYIKLRKIRAAQNISKTIATSQ 268
Query: 256 NITYLPAGQSVL 267
N YL A VL
Sbjct: 269 NRIYLTADNLVL 280
>gi|221307584 prohibitin 2 isoform 1 [Homo sapiens]
Length = 299
Score = 257 bits (657), Expect = 7e-69
Identities = 136/252 (53%), Positives = 188/252 (74%), Gaps = 3/252 (1%)
Query: 17 AVAGGVVNSALYNVDAGHRAVIFDRFRGVQ-DIVVGEGTHFLIPWVQKPIIFDCRSRPRN 75
AVA GV S ++ V+ GHRA+ F+R GVQ D ++ EG HF IPW Q PII+D R+RPR
Sbjct: 31 AVAYGVRES-VFTVEGGHRAIFFNRIGGVQQDTILAEGLHFRIPWFQYPIIYDIRARPRK 89
Query: 76 VPVITGSKDLQNVNITLRILFRPVASQLPRIFTSIGEDYDERVLPSITTEILKSVVARFD 135
+ TGSKDLQ VNI+LR+L RP A +LP ++ +G DY+ERVLPSI E+LKSVVA+F+
Sbjct: 90 ISSPTGSKDLQMVNISLRVLSRPNAQELPSMYQRLGLDYEERVLPSIVNEVLKSVVAKFN 149
Query: 136 AGELITQRELVSRQVSDDLTERAATFGLILDDVSLTHLTFGKEFTEAVEAKQVAQQEAER 195
A +LITQR VS + +LTERA F LILDDV++T L+F +E+T AVEAKQVAQQEA+R
Sbjct: 150 ASQLITQRAQVSLLIRRELTERAKDFSLILDDVAITELSFSREYTAAVEAKQVAQQEAQR 209
Query: 196 ARFVVEKAEQQKKAAIISAEGDSKAAELIANSLATAGDGLIELRKLEAAEDIAYQLSRSR 255
A+F+VEKA+Q+++ I+ AEG+++AA+++ +L + G I+LRK+ AA++I+ ++ S+
Sbjct: 210 AQFLVEKAKQEQRQKIVQAEGEAEAAKMLGEAL-SKNPGYIKLRKIRAAQNISKTIATSQ 268
Query: 256 NITYLPAGQSVL 267
N YL A VL
Sbjct: 269 NRIYLTADNLVL 280
>gi|38016911 stomatin isoform a [Homo sapiens]
Length = 288
Score = 48.1 bits (113), Expect = 8e-06
Identities = 48/219 (21%), Positives = 98/219 (44%), Gaps = 25/219 (11%)
Query: 35 RAVIFDRFRGVQDIVVGEGTHFLIPWVQKPIIFDCRSRPRNVP---VITGSKDLQNVNIT 91
RA+IF R +Q G G F++P I D R+ ++P ++T KD +++
Sbjct: 62 RAIIFRLGRILQGGAKGPGLFFILPCTDSFIKVDMRTISFDIPPQEILT--KDSVTISVD 119
Query: 92 LRILFRPVASQLPRIFTSIGEDYDERVLPSITTEILKSVVARFDAGELITQRELVSRQVS 151
+ +R V + + D R+L T L++V+ + ++++ RE ++ +
Sbjct: 120 GVVYYR-VQNATLAVANITNADSATRLLAQTT---LRNVLGTKNLSQILSDREEIAHNMQ 175
Query: 152 DDLTERAATFGLILDDVSLTHLTFGKEFTEAVEAKQVAQQEAERARFVVEKAEQQKKAAI 211
L + +G+ ++ V + + + A+ A+ A +EA +A +
Sbjct: 176 STLDDATDAWGIKVERVEIKDVKLPVQLQRAMAAEAEASREA--------------RAKV 221
Query: 212 ISAEGDSKAAELI--ANSLATAGDGLIELRKLEAAEDIA 248
I+AEG+ A+ + A+ + T ++LR L+ IA
Sbjct: 222 IAAEGEMNASRALKEASMVITESPAALQLRYLQTLTTIA 260
>gi|239746652 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1513
Score = 33.5 bits (75), Expect = 0.20
Identities = 40/150 (26%), Positives = 67/150 (44%), Gaps = 13/150 (8%)
Query: 108 TSIGEDYDERVLPSITTEILKSVVARFDAGELITQRELVSRQVSDDLTERAATFGLILDD 167
T+ G ++ V + E L VVA DA + I + + ++ + A G+ +D
Sbjct: 272 TAHGVTNEDAVQGVVNQEALHGVVANEDAAQAIAKPDSAHGIANEGVANEVAAQGIATED 331
Query: 168 VS---LTHLTFGKEFTEAVEAKQVAQQEAERARFVVEKAEQQKKAAIISAEG--DSKAAE 222
V+ G EA +A +A+Q+A A + + Q A +A G + AA+
Sbjct: 332 VADGIAEDAAHGITNEEAAQA--IAKQDA--AHSITNEDAVQGVANEDAAHGVANEDAAQ 387
Query: 223 LIANSLATAG----DGLIELRKLEAAEDIA 248
IAN +AT G D + + +AA+ IA
Sbjct: 388 GIANEVATHGISKEDAVQGIANEDAAQGIA 417
>gi|221316744 stomatin-like 3 isoform 2 [Homo sapiens]
Length = 282
Score = 33.1 bits (74), Expect = 0.27
Identities = 41/219 (18%), Positives = 97/219 (44%), Gaps = 25/219 (11%)
Query: 35 RAVIFDRFRGVQDIVVGEGTHFLIPWVQKPIIFDCRSRPRNVP---VITGSKDLQNVNIT 91
RAV+F R D G G ++P + + D R+ N+P ++T V+
Sbjct: 50 RAVVFRLGRIQADKAKGPGLILVLPCIDVFVKVDLRTVTCNIPPQEILTRDSVTTQVD-- 107
Query: 92 LRILFRPVASQLPRIFTSIGEDYDERVLPSITTEILKSVVARFDAGELITQRELVSRQVS 151
+++ + S + + ++ + + L + TT L++V+ +++ RE ++ +
Sbjct: 108 -GVVYYRIYSAVSAV-ANVNDVHQATFLLAQTT--LRNVLGTQTLSQILAGREEIAHSIQ 163
Query: 152 DDLTERAATFGLILDDVSLTHLTFGKEFTEAVEAKQVAQQEAERARFVVEKAEQQKKAAI 211
L + +G+ + V + K+ V+ ++ EAE A ++ +A +
Sbjct: 164 TLLDDATELWGIRVARVEI------KDVRIPVQLQRSMAAEAE--------ATREARAKV 209
Query: 212 ISAEGDSKAAELIANSLATAGDG--LIELRKLEAAEDIA 248
++AEG+ A++ + ++ + ++LR L+ +A
Sbjct: 210 LAAEGEMNASKSLKSASMVLAESPIALQLRYLQTLSTVA 248
>gi|21686995 stomatin-like 3 isoform 1 [Homo sapiens]
Length = 291
Score = 33.1 bits (74), Expect = 0.27
Identities = 41/219 (18%), Positives = 97/219 (44%), Gaps = 25/219 (11%)
Query: 35 RAVIFDRFRGVQDIVVGEGTHFLIPWVQKPIIFDCRSRPRNVP---VITGSKDLQNVNIT 91
RAV+F R D G G ++P + + D R+ N+P ++T V+
Sbjct: 59 RAVVFRLGRIQADKAKGPGLILVLPCIDVFVKVDLRTVTCNIPPQEILTRDSVTTQVD-- 116
Query: 92 LRILFRPVASQLPRIFTSIGEDYDERVLPSITTEILKSVVARFDAGELITQRELVSRQVS 151
+++ + S + + ++ + + L + TT L++V+ +++ RE ++ +
Sbjct: 117 -GVVYYRIYSAVSAV-ANVNDVHQATFLLAQTT--LRNVLGTQTLSQILAGREEIAHSIQ 172
Query: 152 DDLTERAATFGLILDDVSLTHLTFGKEFTEAVEAKQVAQQEAERARFVVEKAEQQKKAAI 211
L + +G+ + V + K+ V+ ++ EAE A ++ +A +
Sbjct: 173 TLLDDATELWGIRVARVEI------KDVRIPVQLQRSMAAEAE--------ATREARAKV 218
Query: 212 ISAEGDSKAAELIANSLATAGDG--LIELRKLEAAEDIA 248
++AEG+ A++ + ++ + ++LR L+ +A
Sbjct: 219 LAAEGEMNASKSLKSASMVLAESPIALQLRYLQTLSTVA 257
>gi|41322923 plectin 1 isoform 11 [Homo sapiens]
Length = 4547
Score = 32.3 bits (72), Expect = 0.45
Identities = 25/65 (38%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 181 EAVEAKQVAQQEAERARFVVEKAEQQKKAAIISAEGDSKAAELIANSLATAGDGLIELRK 240
EA K+ AQ+EAER R V+ Q+K+ A + KA A A L ELR
Sbjct: 1484 EAEAQKRQAQEEAERLRRQVQDESQRKRQAEVELASRVKAEAEAAREKQRALQALEELR- 1542
Query: 241 LEAAE 245
L+A E
Sbjct: 1543 LQAEE 1547
Score = 29.3 bits (64), Expect = 3.8
Identities = 14/35 (40%), Positives = 22/35 (62%)
Query: 176 GKEFTEAVEAKQVAQQEAERARFVVEKAEQQKKAA 210
GK +AV +++A+QE E+ R + E QQ+ AA
Sbjct: 1677 GKAEEQAVRQRELAEQELEKQRQLAEGTAQQRLAA 1711
Score = 29.3 bits (64), Expect = 3.8
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 5/73 (6%)
Query: 181 EAVEAKQVAQQEAERARFVVEKAEQQKKAAIISAEGDSKAAELIANSLATAGDGLIELRK 240
EA +Q+A+++A R R E+ +K AAI A AE+ + LR+
Sbjct: 1812 EAKRQRQLAEEDAARQRAEAERVLAEKLAAIGEATRLKTEAEIALKEKEAENE---RLRR 1868
Query: 241 LEAAEDIAYQLSR 253
L AED A+Q R
Sbjct: 1869 L--AEDEAFQRRR 1879
>gi|41322914 plectin 1 isoform 10 [Homo sapiens]
Length = 4551
Score = 32.3 bits (72), Expect = 0.45
Identities = 25/65 (38%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 181 EAVEAKQVAQQEAERARFVVEKAEQQKKAAIISAEGDSKAAELIANSLATAGDGLIELRK 240
EA K+ AQ+EAER R V+ Q+K+ A + KA A A L ELR
Sbjct: 1488 EAEAQKRQAQEEAERLRRQVQDESQRKRQAEVELASRVKAEAEAAREKQRALQALEELR- 1546
Query: 241 LEAAE 245
L+A E
Sbjct: 1547 LQAEE 1551
Score = 29.3 bits (64), Expect = 3.8
Identities = 14/35 (40%), Positives = 22/35 (62%)
Query: 176 GKEFTEAVEAKQVAQQEAERARFVVEKAEQQKKAA 210
GK +AV +++A+QE E+ R + E QQ+ AA
Sbjct: 1681 GKAEEQAVRQRELAEQELEKQRQLAEGTAQQRLAA 1715
Score = 29.3 bits (64), Expect = 3.8
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 5/73 (6%)
Query: 181 EAVEAKQVAQQEAERARFVVEKAEQQKKAAIISAEGDSKAAELIANSLATAGDGLIELRK 240
EA +Q+A+++A R R E+ +K AAI A AE+ + LR+
Sbjct: 1816 EAKRQRQLAEEDAARQRAEAERVLAEKLAAIGEATRLKTEAEIALKEKEAENE---RLRR 1872
Query: 241 LEAAEDIAYQLSR 253
L AED A+Q R
Sbjct: 1873 L--AEDEAFQRRR 1883
>gi|41322919 plectin 1 isoform 8 [Homo sapiens]
Length = 4547
Score = 32.3 bits (72), Expect = 0.45
Identities = 25/65 (38%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 181 EAVEAKQVAQQEAERARFVVEKAEQQKKAAIISAEGDSKAAELIANSLATAGDGLIELRK 240
EA K+ AQ+EAER R V+ Q+K+ A + KA A A L ELR
Sbjct: 1484 EAEAQKRQAQEEAERLRRQVQDESQRKRQAEVELASRVKAEAEAAREKQRALQALEELR- 1542
Query: 241 LEAAE 245
L+A E
Sbjct: 1543 LQAEE 1547
Score = 29.3 bits (64), Expect = 3.8
Identities = 14/35 (40%), Positives = 22/35 (62%)
Query: 176 GKEFTEAVEAKQVAQQEAERARFVVEKAEQQKKAA 210
GK +AV +++A+QE E+ R + E QQ+ AA
Sbjct: 1677 GKAEEQAVRQRELAEQELEKQRQLAEGTAQQRLAA 1711
Score = 29.3 bits (64), Expect = 3.8
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 5/73 (6%)
Query: 181 EAVEAKQVAQQEAERARFVVEKAEQQKKAAIISAEGDSKAAELIANSLATAGDGLIELRK 240
EA +Q+A+++A R R E+ +K AAI A AE+ + LR+
Sbjct: 1812 EAKRQRQLAEEDAARQRAEAERVLAEKLAAIGEATRLKTEAEIALKEKEAENE---RLRR 1868
Query: 241 LEAAEDIAYQLSR 253
L AED A+Q R
Sbjct: 1869 L--AEDEAFQRRR 1879
>gi|41322910 plectin 1 isoform 7 [Homo sapiens]
Length = 4515
Score = 32.3 bits (72), Expect = 0.45
Identities = 25/65 (38%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 181 EAVEAKQVAQQEAERARFVVEKAEQQKKAAIISAEGDSKAAELIANSLATAGDGLIELRK 240
EA K+ AQ+EAER R V+ Q+K+ A + KA A A L ELR
Sbjct: 1452 EAEAQKRQAQEEAERLRRQVQDESQRKRQAEVELASRVKAEAEAAREKQRALQALEELR- 1510
Query: 241 LEAAE 245
L+A E
Sbjct: 1511 LQAEE 1515
Score = 29.3 bits (64), Expect = 3.8
Identities = 14/35 (40%), Positives = 22/35 (62%)
Query: 176 GKEFTEAVEAKQVAQQEAERARFVVEKAEQQKKAA 210
GK +AV +++A+QE E+ R + E QQ+ AA
Sbjct: 1645 GKAEEQAVRQRELAEQELEKQRQLAEGTAQQRLAA 1679
Score = 29.3 bits (64), Expect = 3.8
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 5/73 (6%)
Query: 181 EAVEAKQVAQQEAERARFVVEKAEQQKKAAIISAEGDSKAAELIANSLATAGDGLIELRK 240
EA +Q+A+++A R R E+ +K AAI A AE+ + LR+
Sbjct: 1780 EAKRQRQLAEEDAARQRAEAERVLAEKLAAIGEATRLKTEAEIALKEKEAENE---RLRR 1836
Query: 241 LEAAEDIAYQLSR 253
L AED A+Q R
Sbjct: 1837 L--AEDEAFQRRR 1847
>gi|41322916 plectin 1 isoform 6 [Homo sapiens]
Length = 4684
Score = 32.3 bits (72), Expect = 0.45
Identities = 25/65 (38%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 181 EAVEAKQVAQQEAERARFVVEKAEQQKKAAIISAEGDSKAAELIANSLATAGDGLIELRK 240
EA K+ AQ+EAER R V+ Q+K+ A + KA A A L ELR
Sbjct: 1621 EAEAQKRQAQEEAERLRRQVQDESQRKRQAEVELASRVKAEAEAAREKQRALQALEELR- 1679
Query: 241 LEAAE 245
L+A E
Sbjct: 1680 LQAEE 1684
Score = 29.3 bits (64), Expect = 3.8
Identities = 14/35 (40%), Positives = 22/35 (62%)
Query: 176 GKEFTEAVEAKQVAQQEAERARFVVEKAEQQKKAA 210
GK +AV +++A+QE E+ R + E QQ+ AA
Sbjct: 1814 GKAEEQAVRQRELAEQELEKQRQLAEGTAQQRLAA 1848
Score = 29.3 bits (64), Expect = 3.8
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 5/73 (6%)
Query: 181 EAVEAKQVAQQEAERARFVVEKAEQQKKAAIISAEGDSKAAELIANSLATAGDGLIELRK 240
EA +Q+A+++A R R E+ +K AAI A AE+ + LR+
Sbjct: 1949 EAKRQRQLAEEDAARQRAEAERVLAEKLAAIGEATRLKTEAEIALKEKEAENE---RLRR 2005
Query: 241 LEAAEDIAYQLSR 253
L AED A+Q R
Sbjct: 2006 L--AEDEAFQRRR 2016
>gi|41322908 plectin 1 isoform 3 [Homo sapiens]
Length = 4525
Score = 32.3 bits (72), Expect = 0.45
Identities = 25/65 (38%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 181 EAVEAKQVAQQEAERARFVVEKAEQQKKAAIISAEGDSKAAELIANSLATAGDGLIELRK 240
EA K+ AQ+EAER R V+ Q+K+ A + KA A A L ELR
Sbjct: 1462 EAEAQKRQAQEEAERLRRQVQDESQRKRQAEVELASRVKAEAEAAREKQRALQALEELR- 1520
Query: 241 LEAAE 245
L+A E
Sbjct: 1521 LQAEE 1525
Score = 29.3 bits (64), Expect = 3.8
Identities = 14/35 (40%), Positives = 22/35 (62%)
Query: 176 GKEFTEAVEAKQVAQQEAERARFVVEKAEQQKKAA 210
GK +AV +++A+QE E+ R + E QQ+ AA
Sbjct: 1655 GKAEEQAVRQRELAEQELEKQRQLAEGTAQQRLAA 1689
Score = 29.3 bits (64), Expect = 3.8
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 5/73 (6%)
Query: 181 EAVEAKQVAQQEAERARFVVEKAEQQKKAAIISAEGDSKAAELIANSLATAGDGLIELRK 240
EA +Q+A+++A R R E+ +K AAI A AE+ + LR+
Sbjct: 1790 EAKRQRQLAEEDAARQRAEAERVLAEKLAAIGEATRLKTEAEIALKEKEAENE---RLRR 1846
Query: 241 LEAAEDIAYQLSR 253
L AED A+Q R
Sbjct: 1847 L--AEDEAFQRRR 1857
>gi|41322912 plectin 1 isoform 2 [Homo sapiens]
Length = 4533
Score = 32.3 bits (72), Expect = 0.45
Identities = 25/65 (38%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 181 EAVEAKQVAQQEAERARFVVEKAEQQKKAAIISAEGDSKAAELIANSLATAGDGLIELRK 240
EA K+ AQ+EAER R V+ Q+K+ A + KA A A L ELR
Sbjct: 1470 EAEAQKRQAQEEAERLRRQVQDESQRKRQAEVELASRVKAEAEAAREKQRALQALEELR- 1528
Query: 241 LEAAE 245
L+A E
Sbjct: 1529 LQAEE 1533
Score = 29.3 bits (64), Expect = 3.8
Identities = 14/35 (40%), Positives = 22/35 (62%)
Query: 176 GKEFTEAVEAKQVAQQEAERARFVVEKAEQQKKAA 210
GK +AV +++A+QE E+ R + E QQ+ AA
Sbjct: 1663 GKAEEQAVRQRELAEQELEKQRQLAEGTAQQRLAA 1697
Score = 29.3 bits (64), Expect = 3.8
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 5/73 (6%)
Query: 181 EAVEAKQVAQQEAERARFVVEKAEQQKKAAIISAEGDSKAAELIANSLATAGDGLIELRK 240
EA +Q+A+++A R R E+ +K AAI A AE+ + LR+
Sbjct: 1798 EAKRQRQLAEEDAARQRAEAERVLAEKLAAIGEATRLKTEAEIALKEKEAENE---RLRR 1854
Query: 241 LEAAEDIAYQLSR 253
L AED A+Q R
Sbjct: 1855 L--AEDEAFQRRR 1865
>gi|47607492 plectin 1 isoform 1 [Homo sapiens]
Length = 4574
Score = 32.3 bits (72), Expect = 0.45
Identities = 25/65 (38%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 181 EAVEAKQVAQQEAERARFVVEKAEQQKKAAIISAEGDSKAAELIANSLATAGDGLIELRK 240
EA K+ AQ+EAER R V+ Q+K+ A + KA A A L ELR
Sbjct: 1511 EAEAQKRQAQEEAERLRRQVQDESQRKRQAEVELASRVKAEAEAAREKQRALQALEELR- 1569
Query: 241 LEAAE 245
L+A E
Sbjct: 1570 LQAEE 1574
Score = 29.3 bits (64), Expect = 3.8
Identities = 14/35 (40%), Positives = 22/35 (62%)
Query: 176 GKEFTEAVEAKQVAQQEAERARFVVEKAEQQKKAA 210
GK +AV +++A+QE E+ R + E QQ+ AA
Sbjct: 1704 GKAEEQAVRQRELAEQELEKQRQLAEGTAQQRLAA 1738
Score = 29.3 bits (64), Expect = 3.8
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 5/73 (6%)
Query: 181 EAVEAKQVAQQEAERARFVVEKAEQQKKAAIISAEGDSKAAELIANSLATAGDGLIELRK 240
EA +Q+A+++A R R E+ +K AAI A AE+ + LR+
Sbjct: 1839 EAKRQRQLAEEDAARQRAEAERVLAEKLAAIGEATRLKTEAEIALKEKEAENE---RLRR 1895
Query: 241 LEAAEDIAYQLSR 253
L AED A+Q R
Sbjct: 1896 L--AEDEAFQRRR 1906
>gi|197927452 dynein, axonemal, heavy chain 1 [Homo sapiens]
Length = 4265
Score = 31.6 bits (70), Expect = 0.77
Identities = 27/100 (27%), Positives = 43/100 (43%), Gaps = 4/100 (4%)
Query: 6 FESIGKFGLALAVAGGVVNSALYN-VDAGHRAVIFDRFRGVQDIVVGEGTHFLIPWVQKP 64
F ++GKF LA AG +N +D +V+ + +Q F+ V+ P
Sbjct: 1613 FMAMGKFFKGLASAGAWACFDEFNRIDIEVLSVVAQQITTIQKAQQQRVERFMFEGVEIP 1672
Query: 65 IIFDCRSRPRNVPVITGSKDLQNVNITLRILFRPVASQLP 104
++ C P G +L + L+ LFRPVA +P
Sbjct: 1673 LVPSCAVFITMNPGYAGRTELPD---NLKALFRPVAMMVP 1709
>gi|239757639 PREDICTED: similar to collagen, type I, alpha 2 [Homo
sapiens]
Length = 2378
Score = 30.8 bits (68), Expect = 1.3
Identities = 29/128 (22%), Positives = 53/128 (41%), Gaps = 5/128 (3%)
Query: 108 TSIGEDYDERVLPSITTEILKSVVARFDAGELITQRELVSRQVSDDLTERAATFGLILDD 167
T+ G ++ V + E L VVA DA + I + + ++ + A G+ +D
Sbjct: 849 TAHGVTNEDAVQGVVNEEALHGVVANEDAAQAIAKPDAAHGIANEGVANEVAAQGIATED 908
Query: 168 VS---LTHLTFGKEFTEAVEAKQVAQQEAERARFVVEKAEQQKKAAIISAEGDSKAAELI 224
V+ G EA +A +A+Q+A + + A+ + AA+ +
Sbjct: 909 VADGIAKDAAHGITKEEAAQA--IAKQDAAHSITNEDAAQGVANEDAAHGVANEDAAQGV 966
Query: 225 ANSLATAG 232
AN +A G
Sbjct: 967 ANEVAAQG 974
>gi|156104874 envoplakin [Homo sapiens]
Length = 2033
Score = 30.8 bits (68), Expect = 1.3
Identities = 41/196 (20%), Positives = 79/196 (40%), Gaps = 20/196 (10%)
Query: 82 SKDLQNVNITLRILFRPVASQLPRIFTSIGEDYDERVLPSITTEILKSVVARFDAGELIT 141
+++ +N+ + + +L + SQ I+ + +RVL + + +
Sbjct: 1496 NRECKNLQVQIDVL-QKAKSQEKTIYKEVIRVQKDRVLEDERARVWEML----------- 1543
Query: 142 QRELVSRQVSDDLTERAATFGLILDDVSLTHLTFGKEFTEAVEAKQVAQQEAERARFVVE 201
RE +RQ + E A +D T+ +E +E A+ A QE R + +
Sbjct: 1544 NRERTARQARE---EEARRLRERIDRAETLGRTWSREESELQRARDQADQECGRLQQELR 1600
Query: 202 KAEQQKKAAIISAEGDSK-AAELIANSLATAGDGLIELRKLEAA----EDIAYQLSRSRN 256
E+QK+ + + +SK ++ + A EL +LEAA +D Y+ R+
Sbjct: 1601 ALERQKQQQTLQLQEESKLLSQKTESERQKAAQRGQELSRLEAAILREKDQIYEKERTLR 1660
Query: 257 ITYLPAGQSVLLQLPQ 272
+ + L Q Q
Sbjct: 1661 DLHAKVSREELSQETQ 1676
>gi|219521893 coiled-coil transcriptional coactivator isoform 2
[Homo sapiens]
Length = 606
Score = 29.3 bits (64), Expect = 3.8
Identities = 24/108 (22%), Positives = 48/108 (44%), Gaps = 13/108 (12%)
Query: 137 GELITQRELVSRQVSD-------------DLTERAATFGLILDDVSLTHLTFGKEFTEAV 183
GE+ +R+++SRQ D ++E+ T + LD + T +E + +
Sbjct: 177 GEITEERDILSRQQGDHVARILELEDDIQTISEKVLTKEVELDRLRDTVKALTREQEKLL 236
Query: 184 EAKQVAQQEAERARFVVEKAEQQKKAAIISAEGDSKAAELIANSLATA 231
+ Q + E++ +E ++Q + A A + A L+ LA+A
Sbjct: 237 GQLKEVQADKEQSEAELEPLKEQLRGAQELAASSQQKATLLGEELASA 284
>gi|134152708 arginine and glutamate rich 1 [Homo sapiens]
Length = 273
Score = 29.3 bits (64), Expect = 3.8
Identities = 22/80 (27%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 144 ELVSRQVSDDLTERAATFGL-ILDDVSLTHLTFGKEFTEAVEAKQVAQQEAERARFVVEK 202
ELV+++V ++L +R +L V K+ E +E ++ A+ A++AR E+
Sbjct: 136 ELVAKRVEEELEKRKDEIEREVLRRVEEAKRIMEKQLLEELERQRQAELAAQKAREEEER 195
Query: 203 AEQQKKAAIISAEGDSKAAE 222
A++++ I+ E + K AE
Sbjct: 196 AKREELERILE-ENNRKIAE 214
>gi|110815815 centlein isoform 1 [Homo sapiens]
Length = 1406
Score = 29.3 bits (64), Expect = 3.8
Identities = 36/132 (27%), Positives = 57/132 (43%), Gaps = 18/132 (13%)
Query: 112 EDYDERVLPSITTEILKSVVARFDAGELITQRELVSRQVSDDLTERAATFGLILDDVSLT 171
E D +VL EIL+ A+ E QRE V +Q +DL +R V
Sbjct: 156 EAKDRKVL-----EILQVKDAKIQEFE---QRESVLKQEINDLVKRKIA-------VDEE 200
Query: 172 HLTFGKEFTEAVEAKQVAQQEAERARFVVEKAEQQKKAAIISAEGDSKAAELIANSLATA 231
+ KEF++ + + QE + + V+ E+Q + I + E ++K L
Sbjct: 201 NAFLRKEFSDLEKKFKDKSQEIKDTKECVQNKEEQNRLVIKNLEEENKKLSTRCTDLL-- 258
Query: 232 GDGLIELRKLEA 243
+ L +LRK EA
Sbjct: 259 -NDLEKLRKQEA 269
>gi|167555106 centlein isoform 2 [Homo sapiens]
Length = 391
Score = 29.3 bits (64), Expect = 3.8
Identities = 36/132 (27%), Positives = 57/132 (43%), Gaps = 18/132 (13%)
Query: 112 EDYDERVLPSITTEILKSVVARFDAGELITQRELVSRQVSDDLTERAATFGLILDDVSLT 171
E D +VL EIL+ A+ E QRE V +Q +DL +R V
Sbjct: 156 EAKDRKVL-----EILQVKDAKIQEFE---QRESVLKQEINDLVKRKIA-------VDEE 200
Query: 172 HLTFGKEFTEAVEAKQVAQQEAERARFVVEKAEQQKKAAIISAEGDSKAAELIANSLATA 231
+ KEF++ + + QE + + V+ E+Q + I + E ++K L
Sbjct: 201 NAFLRKEFSDLEKKFKDKSQEIKDTKECVQNKEEQNRLVIKNLEEENKKLSTRCTDLL-- 258
Query: 232 GDGLIELRKLEA 243
+ L +LRK EA
Sbjct: 259 -NDLEKLRKQEA 269
>gi|7305503 stomatin (EPB72)-like 2 [Homo sapiens]
Length = 356
Score = 28.9 bits (63), Expect = 5.0
Identities = 27/144 (18%), Positives = 58/144 (40%), Gaps = 14/144 (9%)
Query: 109 SIGEDYDERVLPSITTEILKSVVARFDAGELITQRELVSRQVSDDLTERAATFGLILDDV 168
S G + E + + ++S + + ++ +RE ++ + D + + A +G+
Sbjct: 116 SYGVEDPEYAVTQLAQTTMRSELGKLSLDKVFRERESLNASIVDAINQAADCWGIRCLRY 175
Query: 169 SLTHLTFGKEFTEAVEAKQVAQQEAERARFVVEKAEQQKKAAIISAEGDSKAAELIANSL 228
+ K+ K+ Q + E AE++K+A ++ +EG ++A +A
Sbjct: 176 EI------KDIHVPPRVKESMQMQVE--------AERRKRATVLESEGTRESAINVAEGK 221
Query: 229 ATAGDGLIELRKLEAAEDIAYQLS 252
A E K E A + S
Sbjct: 222 KQAQILASEAEKAEQINQAAGEAS 245
>gi|13376810 enhancer of polycomb 1 [Homo sapiens]
Length = 836
Score = 28.5 bits (62), Expect = 6.5
Identities = 13/39 (33%), Positives = 22/39 (56%)
Query: 116 ERVLPSITTEILKSVVARFDAGELITQRELVSRQVSDDL 154
ER L ++ L S A+F A L+T +L+ ++ DD+
Sbjct: 640 ERTLQGFVSKTLDSASAQFAASALVTSEQLMGFKMKDDV 678
>gi|190684710 EFR3 homolog B [Homo sapiens]
Length = 817
Score = 28.5 bits (62), Expect = 6.5
Identities = 33/122 (27%), Positives = 56/122 (45%), Gaps = 14/122 (11%)
Query: 86 QNVN-ITLRILFRPVASQLPRIFTSIGEDYDERVLPSITTEILKSVVA-RFDAGELITQR 143
QN++ + + +LFR S++ + G + D LP I + ++ R GE I+ +
Sbjct: 644 QNLDGVVIELLFRQ--SKISEVLGGSGYNSDRLCLPYIPQLTDEDRLSKRRSIGETISLQ 701
Query: 144 ELVSRQVSDDLTERAATFGLILDDVSLTHLTFGKEFTEAVEAKQVAQQEAERARFVVEKA 203
V + S + ER +T+ T K ++V V +QE ER R VVEK
Sbjct: 702 VEVESRNSPEKEERVPA-------EEITYETLKKAIVDSVA---VEEQERERRRQVVEKF 751
Query: 204 EQ 205
++
Sbjct: 752 QK 753
>gi|187607445 hypothetical protein LOC79137 [Homo sapiens]
Length = 543
Score = 28.5 bits (62), Expect = 6.5
Identities = 14/41 (34%), Positives = 21/41 (51%)
Query: 108 TSIGEDYDERVLPSITTEILKSVVARFDAGELITQRELVSR 148
T + ED D++ LPS E L + + GEL +L+ R
Sbjct: 334 TDVSEDLDQQSLPSEPEETLSRDLGEGEEGELAPPEDLLGR 374
>gi|219842214 protein phosphatase 1, regulatory (inhibitor) subunit
12A isoform b [Homo sapiens]
Length = 943
Score = 28.1 bits (61), Expect = 8.5
Identities = 25/102 (24%), Positives = 46/102 (45%), Gaps = 6/102 (5%)
Query: 121 SITTEIL---KSVVARFDAGELITQRELVSRQVSDDLTERAATFGLILDDVSLTHLTFGK 177
S TTE+ +S + E +QR+ SRQ R +T G+ L D+ T G+
Sbjct: 570 SSTTEVRERRRSYLTPVRDEESESQRKARSRQARQS---RRSTQGVTLTDLQEAEKTIGR 626
Query: 178 EFTEAVEAKQVAQQEAERARFVVEKAEQQKKAAIISAEGDSK 219
+ ++ ++E E ++ +++KK + S E + K
Sbjct: 627 SRSTRTREQENEEKEKEEKEKQDKEKQEEKKESETSREDEYK 668
>gi|219842212 protein phosphatase 1, regulatory (inhibitor) subunit
12A isoform a [Homo sapiens]
Length = 1030
Score = 28.1 bits (61), Expect = 8.5
Identities = 25/102 (24%), Positives = 46/102 (45%), Gaps = 6/102 (5%)
Query: 121 SITTEIL---KSVVARFDAGELITQRELVSRQVSDDLTERAATFGLILDDVSLTHLTFGK 177
S TTE+ +S + E +QR+ SRQ R +T G+ L D+ T G+
Sbjct: 657 SSTTEVRERRRSYLTPVRDEESESQRKARSRQARQS---RRSTQGVTLTDLQEAEKTIGR 713
Query: 178 EFTEAVEAKQVAQQEAERARFVVEKAEQQKKAAIISAEGDSK 219
+ ++ ++E E ++ +++KK + S E + K
Sbjct: 714 SRSTRTREQENEEKEKEEKEKQDKEKQEEKKESETSREDEYK 755
>gi|4505317 protein phosphatase 1, regulatory (inhibitor) subunit
12A isoform a [Homo sapiens]
Length = 1030
Score = 28.1 bits (61), Expect = 8.5
Identities = 25/102 (24%), Positives = 46/102 (45%), Gaps = 6/102 (5%)
Query: 121 SITTEIL---KSVVARFDAGELITQRELVSRQVSDDLTERAATFGLILDDVSLTHLTFGK 177
S TTE+ +S + E +QR+ SRQ R +T G+ L D+ T G+
Sbjct: 657 SSTTEVRERRRSYLTPVRDEESESQRKARSRQARQS---RRSTQGVTLTDLQEAEKTIGR 713
Query: 178 EFTEAVEAKQVAQQEAERARFVVEKAEQQKKAAIISAEGDSK 219
+ ++ ++E E ++ +++KK + S E + K
Sbjct: 714 SRSTRTREQENEEKEKEEKEKQDKEKQEEKKESETSREDEYK 755
>gi|51093836 hypothetical protein LOC126859 isoform 1 [Homo sapiens]
Length = 1012
Score = 28.1 bits (61), Expect = 8.5
Identities = 37/136 (27%), Positives = 60/136 (44%), Gaps = 18/136 (13%)
Query: 100 ASQLPRIFTSIGEDYDERVLPSITTEILKSVVARFDAGELITQRELVSRQVSDDLTE--- 156
+++ ++ IGED + P T++L S G L Q+ L + V + + E
Sbjct: 875 STEKEKLIRFIGEDENVHSKPLFETDVLSSWRESAKQGTL-AQKYLEAMAVIEHMQEKLL 933
Query: 157 ----RAATFGLILDDV--SLTH-LTFGKEFTEAV-----EAKQVAQQEAERARFVVEKAE 204
RA +D L H L K+ E V E+K+ + + ER V E+ E
Sbjct: 934 EVENRARQAEEKFEDAYEKLHHTLIKNKDLEELVMTSRKESKEEKENQDERE--VKEEEE 991
Query: 205 QQKKAAIISAEGDSKA 220
QQ++ + SAE SK+
Sbjct: 992 QQEEEEVRSAENSSKS 1007
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.135 0.369
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,158,851
Number of Sequences: 37866
Number of extensions: 316117
Number of successful extensions: 970
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 869
Number of HSP's gapped (non-prelim): 113
length of query: 272
length of database: 18,247,518
effective HSP length: 101
effective length of query: 171
effective length of database: 14,423,052
effective search space: 2466341892
effective search space used: 2466341892
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.