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Search of human proteins with 4505215
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4505215 matrix metalloproteinase 1 isoform 1 preproprotein
[Homo sapiens]
(469 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4505215 matrix metalloproteinase 1 isoform 1 preproprotein [H... 989 0.0
gi|225543094 matrix metalloproteinase 1 isoform 2 [Homo sapiens] 855 0.0
gi|4505221 matrix metalloproteinase 8 preproprotein [Homo sapiens] 561 e-160
gi|4505217 matrix metalloproteinase 3 preproprotein [Homo sapiens] 526 e-149
gi|4505205 matrix metalloproteinase 10 preproprotein [Homo sapiens] 502 e-142
gi|4505209 matrix metalloproteinase 13 preproprotein [Homo sapiens] 458 e-129
gi|73858572 matrix metalloproteinase 12 preproprotein [Homo sapi... 454 e-128
gi|73808268 matrix metalloproteinase 27 [Homo sapiens] 450 e-126
gi|45359865 matrix metalloproteinase 20 preproprotein [Homo sapi... 407 e-113
gi|5729929 matrix metalloproteinase 24 preproprotein [Homo sapiens] 298 5e-81
gi|13027802 matrix metalloproteinase 16 isoform 1 preproprotein ... 290 2e-78
gi|4505211 matrix metalloproteinase 15 preproprotein [Homo sapiens] 274 1e-73
gi|4826834 matrix metalloproteinase 14 preproprotein [Homo sapiens] 272 4e-73
gi|58331148 matrix metalloproteinase 11 preproprotein [Homo sapi... 248 1e-65
gi|112382270 matrix metalloproteinase 17 preproprotein [Homo sap... 239 4e-63
gi|4505219 matrix metalloproteinase 7 preproprotein [Homo sapiens] 236 3e-62
gi|189217853 matrix metalloproteinase 2 isoform b [Homo sapiens] 218 1e-56
gi|11342666 matrix metalloproteinase 2 isoform a preproprotein [... 218 1e-56
gi|149999365 matrix metalloproteinase 16 isoform 2 preproprotein... 212 5e-55
gi|4505213 matrix metalloproteinase 19 isoform rasi-1 preproprot... 210 2e-54
gi|11968059 matrix metalloproteinase 25 preproprotein [Homo sapi... 207 2e-53
gi|13236530 matrix metalloproteinase 28 isoform 1 preproprotein ... 201 1e-51
gi|74272287 matrix metalloproteinase 9 preproprotein [Homo sapiens] 174 2e-43
gi|73808266 matrix metalloproteinase 26 preproprotein [Homo sapi... 172 4e-43
gi|169203154 PREDICTED: similar to hCG2042634 [Homo sapiens] 140 2e-33
gi|22218341 matrix metalloproteinase 21 preproprotein [Homo sapi... 128 1e-29
gi|169203660 PREDICTED: similar to hCG2042634 [Homo sapiens] 113 4e-25
gi|169202084 PREDICTED: similar to hCG2042634 [Homo sapiens] 113 4e-25
gi|5902004 matrix metalloproteinase 23B precursor [Homo sapiens] 107 2e-23
gi|239750339 PREDICTED: hypothetical protein XP_002347374 [Homo ... 87 4e-17
>gi|4505215 matrix metalloproteinase 1 isoform 1 preproprotein [Homo
sapiens]
Length = 469
Score = 989 bits (2556), Expect = 0.0
Identities = 469/469 (100%), Positives = 469/469 (100%)
Query: 1 MHSFPPLLLLLFWGVVSHSFPATLETQEQDVDLVQKYLEKYYNLKNDGRQVEKRRNSGPV 60
MHSFPPLLLLLFWGVVSHSFPATLETQEQDVDLVQKYLEKYYNLKNDGRQVEKRRNSGPV
Sbjct: 1 MHSFPPLLLLLFWGVVSHSFPATLETQEQDVDLVQKYLEKYYNLKNDGRQVEKRRNSGPV 60
Query: 61 VEKLKQMQEFFGLKVTGKPDAETLKVMKQPRCGVPDVAQFVLTEGNPRWEQTHLTYRIEN 120
VEKLKQMQEFFGLKVTGKPDAETLKVMKQPRCGVPDVAQFVLTEGNPRWEQTHLTYRIEN
Sbjct: 61 VEKLKQMQEFFGLKVTGKPDAETLKVMKQPRCGVPDVAQFVLTEGNPRWEQTHLTYRIEN 120
Query: 121 YTPDLPRADVDHAIEKAFQLWSNVTPLTFTKVSEGQADIMISFVRGDHRDNSPFDGPGGN 180
YTPDLPRADVDHAIEKAFQLWSNVTPLTFTKVSEGQADIMISFVRGDHRDNSPFDGPGGN
Sbjct: 121 YTPDLPRADVDHAIEKAFQLWSNVTPLTFTKVSEGQADIMISFVRGDHRDNSPFDGPGGN 180
Query: 181 LAHAFQPGPGIGGDAHFDEDERWTNNFREYNLHRVAAHELGHSLGLSHSTDIGALMYPSY 240
LAHAFQPGPGIGGDAHFDEDERWTNNFREYNLHRVAAHELGHSLGLSHSTDIGALMYPSY
Sbjct: 181 LAHAFQPGPGIGGDAHFDEDERWTNNFREYNLHRVAAHELGHSLGLSHSTDIGALMYPSY 240
Query: 241 TFSGDVQLAQDDIDGIQAIYGRSQNPVQPIGPQTPKACDSKLTFDAITTIRGEVMFFKDR 300
TFSGDVQLAQDDIDGIQAIYGRSQNPVQPIGPQTPKACDSKLTFDAITTIRGEVMFFKDR
Sbjct: 241 TFSGDVQLAQDDIDGIQAIYGRSQNPVQPIGPQTPKACDSKLTFDAITTIRGEVMFFKDR 300
Query: 301 FYMRTNPFYPEVELNFISVFWPQLPNGLEAAYEFADRDEVRFFKGNKYWAVQGQNVLHGY 360
FYMRTNPFYPEVELNFISVFWPQLPNGLEAAYEFADRDEVRFFKGNKYWAVQGQNVLHGY
Sbjct: 301 FYMRTNPFYPEVELNFISVFWPQLPNGLEAAYEFADRDEVRFFKGNKYWAVQGQNVLHGY 360
Query: 361 PKDIYSSFGFPRTVKHIDAALSEENTGKTYFFVANKYWRYDEYKRSMDPGYPKMIAHDFP 420
PKDIYSSFGFPRTVKHIDAALSEENTGKTYFFVANKYWRYDEYKRSMDPGYPKMIAHDFP
Sbjct: 361 PKDIYSSFGFPRTVKHIDAALSEENTGKTYFFVANKYWRYDEYKRSMDPGYPKMIAHDFP 420
Query: 421 GIGHKVDAVFMKDGFFYFFHGTRQYKFDPKTKRILTLQKANSWFNCRKN 469
GIGHKVDAVFMKDGFFYFFHGTRQYKFDPKTKRILTLQKANSWFNCRKN
Sbjct: 421 GIGHKVDAVFMKDGFFYFFHGTRQYKFDPKTKRILTLQKANSWFNCRKN 469
>gi|225543094 matrix metalloproteinase 1 isoform 2 [Homo sapiens]
Length = 403
Score = 855 bits (2210), Expect = 0.0
Identities = 403/403 (100%), Positives = 403/403 (100%)
Query: 67 MQEFFGLKVTGKPDAETLKVMKQPRCGVPDVAQFVLTEGNPRWEQTHLTYRIENYTPDLP 126
MQEFFGLKVTGKPDAETLKVMKQPRCGVPDVAQFVLTEGNPRWEQTHLTYRIENYTPDLP
Sbjct: 1 MQEFFGLKVTGKPDAETLKVMKQPRCGVPDVAQFVLTEGNPRWEQTHLTYRIENYTPDLP 60
Query: 127 RADVDHAIEKAFQLWSNVTPLTFTKVSEGQADIMISFVRGDHRDNSPFDGPGGNLAHAFQ 186
RADVDHAIEKAFQLWSNVTPLTFTKVSEGQADIMISFVRGDHRDNSPFDGPGGNLAHAFQ
Sbjct: 61 RADVDHAIEKAFQLWSNVTPLTFTKVSEGQADIMISFVRGDHRDNSPFDGPGGNLAHAFQ 120
Query: 187 PGPGIGGDAHFDEDERWTNNFREYNLHRVAAHELGHSLGLSHSTDIGALMYPSYTFSGDV 246
PGPGIGGDAHFDEDERWTNNFREYNLHRVAAHELGHSLGLSHSTDIGALMYPSYTFSGDV
Sbjct: 121 PGPGIGGDAHFDEDERWTNNFREYNLHRVAAHELGHSLGLSHSTDIGALMYPSYTFSGDV 180
Query: 247 QLAQDDIDGIQAIYGRSQNPVQPIGPQTPKACDSKLTFDAITTIRGEVMFFKDRFYMRTN 306
QLAQDDIDGIQAIYGRSQNPVQPIGPQTPKACDSKLTFDAITTIRGEVMFFKDRFYMRTN
Sbjct: 181 QLAQDDIDGIQAIYGRSQNPVQPIGPQTPKACDSKLTFDAITTIRGEVMFFKDRFYMRTN 240
Query: 307 PFYPEVELNFISVFWPQLPNGLEAAYEFADRDEVRFFKGNKYWAVQGQNVLHGYPKDIYS 366
PFYPEVELNFISVFWPQLPNGLEAAYEFADRDEVRFFKGNKYWAVQGQNVLHGYPKDIYS
Sbjct: 241 PFYPEVELNFISVFWPQLPNGLEAAYEFADRDEVRFFKGNKYWAVQGQNVLHGYPKDIYS 300
Query: 367 SFGFPRTVKHIDAALSEENTGKTYFFVANKYWRYDEYKRSMDPGYPKMIAHDFPGIGHKV 426
SFGFPRTVKHIDAALSEENTGKTYFFVANKYWRYDEYKRSMDPGYPKMIAHDFPGIGHKV
Sbjct: 301 SFGFPRTVKHIDAALSEENTGKTYFFVANKYWRYDEYKRSMDPGYPKMIAHDFPGIGHKV 360
Query: 427 DAVFMKDGFFYFFHGTRQYKFDPKTKRILTLQKANSWFNCRKN 469
DAVFMKDGFFYFFHGTRQYKFDPKTKRILTLQKANSWFNCRKN
Sbjct: 361 DAVFMKDGFFYFFHGTRQYKFDPKTKRILTLQKANSWFNCRKN 403
>gi|4505221 matrix metalloproteinase 8 preproprotein [Homo sapiens]
Length = 467
Score = 561 bits (1445), Expect = e-160
Identities = 267/461 (57%), Positives = 342/461 (74%), Gaps = 7/461 (1%)
Query: 9 LLLFWGVVSHSFPATLETQEQDVDLVQKYLEKYYNLKNDGRQVEKRRNSGPVVEKLKQMQ 68
LLL +S +FP + ++E++ VQ YLEK+Y L ++ Q ++ + +VEKLK+MQ
Sbjct: 10 LLLLHVQISKAFPVS--SKEKNTKTVQDYLEKFYQLPSNQYQSTRKNGTNVIVEKLKEMQ 67
Query: 69 EFFGLKVTGKPDAETLKVMKQPRCGVPDVAQFVLTEGNPRWEQTHLTYRIENYTPDLPRA 128
FFGL VTGKP+ ETL +MK+PRCGVPD F+LT GNP+WE+T+LTYRI NYTP L A
Sbjct: 68 RFFGLNVTGKPNEETLDMMKKPRCGVPDSGGFMLTPGNPKWERTNLTYRIRNYTPQLSEA 127
Query: 129 DVDHAIEKAFQLWSNVTPLTFTKVSEGQADIMISFVRGDHRDNSPFDGPGGNLAHAFQPG 188
+V+ AI+ AF+LWS +PL FT++S+G+ADI I+F + DH DNSPFDGP G LAHAFQPG
Sbjct: 128 EVERAIKDAFELWSVASPLIFTRISQGEADINIAFYQRDHGDNSPFDGPNGILAHAFQPG 187
Query: 189 PGIGGDAHFDEDERWTNNFREYNLHRVAAHELGHSLGLSHSTDIGALMYPSYTF--SGDV 246
GIGGDAHFD +E WTN YNL VAAHE GHSLGL+HS+D GALMYP+Y F + +
Sbjct: 188 QGIGGDAHFDAEETWTNTSANYNLFLVAAHEFGHSLGLAHSSDPGALMYPNYAFRETSNY 247
Query: 247 QLAQDDIDGIQAIYGRSQNPVQPIGPQTPKACDSKLTFDAITTIRGEVMFFKDRFYMRTN 306
L QDDIDGIQAIYG S NP+QP GP TPK CD LTFDAITT+RGE++FFKDR++ R +
Sbjct: 248 SLPQDDIDGIQAIYGLSSNPIQPTGPSTPKPCDPSLTFDAITTLRGEILFFKDRYFWRRH 307
Query: 307 PFYPEVELNFISVFWPQLPNGLEAAYEFADRDEVRFFKGNKYWAVQGQNVLHGYPKDIYS 366
P VE+NFIS+FWP LP G++AAYE DRD + FKGN+YWA+ G ++L GYPKDI S
Sbjct: 308 PQLQRVEMNFISLFWPSLPTGIQAAYEDFDRDLIFLFKGNQYWALSGYDILQGYPKDI-S 366
Query: 367 SFGFPRTVKHIDAALSEENTGKTYFFVANKYWRYDEYKRSMDPGYPKMIAHDFPGIGHKV 426
++GFP +V+ IDAA+ + KTYFFV +++WRYD ++ M+PGYPK I+ FPGI KV
Sbjct: 367 NYGFPSSVQAIDAAVFYRS--KTYFFVNDQFWRYDNQRQFMEPGYPKSISGAFPGIESKV 424
Query: 427 DAVFMKDGFFYFFHGTRQYKFDPKTKRILTLQKANSWFNCR 467
DAVF ++ FF+ F G R Y FD +R+ + + N W NCR
Sbjct: 425 DAVFQQEHFFHVFSGPRYYAFDLIAQRVTRVARGNKWLNCR 465
>gi|4505217 matrix metalloproteinase 3 preproprotein [Homo sapiens]
Length = 477
Score = 526 bits (1356), Expect = e-149
Identities = 255/478 (53%), Positives = 340/478 (71%), Gaps = 13/478 (2%)
Query: 1 MHSFPPLLLLLFWGVVSHSFPATLETQEQDVDLVQKYLEKYYNLKNDGRQVEKRRNSGPV 60
M S P LLLL ++ ++ ++LVQKYLE YY+LK D +Q +R++SGPV
Sbjct: 1 MKSLPILLLLCVAVCSAYPLDGAARGEDTSMNLVQKYLENYYDLKKDVKQFVRRKDSGPV 60
Query: 61 VEKLKQMQEFFGLKVTGKPDAETLKVMKQPRCGVPDVAQFVLTEGNPRWEQTHLTYRIEN 120
V+K+++MQ+F GL+VTGK D++TL+VM++PRCGVPDV F G P+W +THLTYRI N
Sbjct: 61 VKKIREMQKFLGLEVTGKLDSDTLEVMRKPRCGVPDVGHFRTFPGIPKWRKTHLTYRIVN 120
Query: 121 YTPDLPRADVDHAIEKAFQLWSNVTPLTFTKVSEGQADIMISFVRGDHRDNSPFDGPGGN 180
YTPDLP+ VD A+EKA ++W VTPLTF+++ EG+ADIMISF +H D PFDGPG
Sbjct: 121 YTPDLPKDAVDSAVEKALKVWEEVTPLTFSRLYEGEADIMISFAVREHGDFYPFDGPGNV 180
Query: 181 LAHAFQPGPGIGGDAHFDEDERWTNNFREYNLHRVAAHELGHSLGLSHSTDIGALMYPSY 240
LAHA+ PGPGI GDAHFD+DE+WT + NL VAAHE+GHSLGL HS + ALMYP Y
Sbjct: 181 LAHAYAPGPGINGDAHFDDDEQWTKDTTGTNLFLVAAHEIGHSLGLFHSANTEALMYPLY 240
Query: 241 TFSGDV---QLAQDDIDGIQAIYGRSQN-------PVQPIGPQ--TPKACDSKLTFDAIT 288
D+ +L+QDDI+GIQ++YG + P +P+ P+ TP CD L+FDA++
Sbjct: 241 HSLTDLTRFRLSQDDINGIQSLYGPPPDSPETPLVPTEPVPPEPGTPANCDPALSFDAVS 300
Query: 289 TIRGEVMFFKDRFYMRTNPFYPEVELNFISVFWPQLPNGLEAAYEFADRDEVRFFKGNKY 348
T+RGE++ FKDR + R + E EL+ IS FWP LP+G++AAYE +D V FKGN++
Sbjct: 301 TLRGEILIFKDRHFWRKSLRKLEPELHLISSFWPSLPSGVDAAYEVTSKDLVFIFKGNQF 360
Query: 349 WAVQGQNVLHGYPKDIYSSFGFPRTVKHIDAALSEENTGKTYFFVANKYWRYDEYKRSMD 408
WA++G V GYP+ I+ + GFP TV+ IDAA+S++ KTYFFV +KYWR+DE + SM+
Sbjct: 361 WAIRGNEVRAGYPRGIH-TLGFPPTVRKIDAAISDKEKNKTYFFVEDKYWRFDEKRNSME 419
Query: 409 PGYPKMIAHDFPGIGHKVDAVFMKDGFFYFFHGTRQYKFDPKTKRILTLQKANSWFNC 466
PG+PK IA DFPGI K+DAVF + GFFYFF G+ Q +FDP K++ K+NSW NC
Sbjct: 420 PGFPKQIAEDFPGIDSKIDAVFEEFGFFYFFTGSSQLEFDPNAKKVTHTLKSNSWLNC 477
>gi|4505205 matrix metalloproteinase 10 preproprotein [Homo sapiens]
Length = 476
Score = 502 bits (1293), Expect = e-142
Identities = 246/472 (52%), Positives = 334/472 (70%), Gaps = 16/472 (3%)
Query: 9 LLLFWGVVSHSFPATLETQEQDV--DLVQKYLEKYYNLKNDGRQVEKRRNSGPVVEKLKQ 66
L+L V ++P + +E+D DL Q+YLEKYYNL+ D +Q +R++S +V+K++
Sbjct: 7 LVLLCLPVCSAYPLSGAAKEEDSNKDLAQQYLEKYYNLEKDVKQF-RRKDSNLIVKKIQG 65
Query: 67 MQEFFGLKVTGKPDAETLKVMKQPRCGVPDVAQFVLTEGNPRWEQTHLTYRIENYTPDLP 126
MQ+F GL+VTGK D +TL+VM++PRCGVPDV F G P+W +THLTYRI NYTPDLP
Sbjct: 66 MQKFLGLEVTGKLDTDTLEVMRKPRCGVPDVGHFSSFPGMPKWRKTHLTYRIVNYTPDLP 125
Query: 127 RADVDHAIEKAFQLWSNVTPLTFTKVSEGQADIMISFVRGDHRDNSPFDGPGGNLAHAFQ 186
R VD AIEKA ++W VTPLTF+++ EG+ADIMISF +H D FDGPG +LAHA+
Sbjct: 126 RDAVDSAIEKALKVWEEVTPLTFSRLYEGEADIMISFAVKEHGDFYSFDGPGHSLAHAYP 185
Query: 187 PGPGIGGDAHFDEDERWTNNFREYNLHRVAAHELGHSLGLSHSTDIGALMYP---SYTFS 243
PGPG+ GD HFD+DE+WT + NL VAAHELGHSLGL HS + ALMYP S+T
Sbjct: 186 PGPGLYGDIHFDDDEKWTEDASGTNLFLVAAHELGHSLGLFHSANTEALMYPLYNSFTEL 245
Query: 244 GDVQLAQDDIDGIQAIYG----RSQNPVQPI-----GPQTPKACDSKLTFDAITTIRGEV 294
+L+QDD++GIQ++YG ++ P+ P G + P CD L+FDAI+T+RGE
Sbjct: 246 AQFRLSQDDVNGIQSLYGPPPASTEEPLVPTKSVPSGSEMPAKCDPALSFDAISTLRGEY 305
Query: 295 MFFKDRFYMRTNPFYPEVELNFISVFWPQLPNGLEAAYEFADRDEVRFFKGNKYWAVQGQ 354
+FFKDR++ R + + PE E + IS FWP LP+ L+AAYE RD V FKGN++WA++G
Sbjct: 306 LFFKDRYFWRRSHWNPEPEFHLISAFWPSLPSYLDAAYEVNSRDTVFIFKGNEFWAIRGN 365
Query: 355 NVLHGYPKDIYSSFGFPRTVKHIDAALSEENTGKTYFFVANKYWRYDEYKRSMDPGYPKM 414
V GYP+ I+ + GFP T++ IDAA+S++ KTYFF A+KYWR+DE +SM+ G+P++
Sbjct: 366 EVQAGYPRGIH-TLGFPPTIRKIDAAVSDKEKKKTYFFAADKYWRFDENSQSMEQGFPRL 424
Query: 415 IAHDFPGIGHKVDAVFMKDGFFYFFHGTRQYKFDPKTKRILTLQKANSWFNC 466
IA DFPG+ KVDAV GFFYFF G+ Q++FDP + + + K+NSW +C
Sbjct: 425 IADDFPGVEPKVDAVLQAFGFFYFFSGSSQFEFDPNARMVTHILKSNSWLHC 476
>gi|4505209 matrix metalloproteinase 13 preproprotein [Homo sapiens]
Length = 471
Score = 458 bits (1178), Expect = e-129
Identities = 221/444 (49%), Positives = 296/444 (66%), Gaps = 4/444 (0%)
Query: 25 ETQEQDVDLVQKYLEKYYNLKNDGRQVEKRRNSGPVVEKLKQMQEFFGLKVTGKPDAETL 84
+ E+D+ ++YL YY+ N + K + + E+L++MQ FFGL+VTGK D TL
Sbjct: 30 DLSEEDLQFAERYLRSYYHPTNLAG-ILKENAASSMTERLREMQSFFGLEVTGKLDDNTL 88
Query: 85 KVMKQPRCGVPDVAQFVLTEGNPRWEQTHLTYRIENYTPDLPRADVDHAIEKAFQLWSNV 144
VMK+PRCGVPDV ++ + +W + +LTYRI NYTPD+ ++V+ A +KAF++WS+V
Sbjct: 89 DVMKKPRCGVPDVGEYNVFPRTLKWSKMNLTYRIVNYTPDMTHSEVEKAFKKAFKVWSDV 148
Query: 145 TPLTFTKVSEGQADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDAHFDEDERWT 204
TPL FT++ +G ADIMISF +H D PFDGP G LAHAF PGP GGDAHFD+DE WT
Sbjct: 149 TPLNFTRLHDGIADIMISFGIKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFDDDETWT 208
Query: 205 NNFREYNLHRVAAHELGHSLGLSHSTDIGALMYPSYTFSG--DVQLAQDDIDGIQAIYGR 262
++ + YNL VAAHE GHSLGL HS D GALM+P YT++G L DD+ GIQ++YG
Sbjct: 209 SSSKGYNLFLVAAHEFGHSLGLDHSKDPGALMFPIYTYTGKSHFMLPDDDVQGIQSLYGP 268
Query: 263 SQNPVQPIGPQTPKACDSKLTFDAITTIRGEVMFFKDRFYMRTNPFYPEVELNFISVFWP 322
P P+TP CD L+ DAIT++RGE M FKDRF+ R +P + EL FWP
Sbjct: 269 GDEDPNPKHPKTPDKCDPSLSLDAITSLRGETMIFKDRFFWRLHPQQVDAELFLTKSFWP 328
Query: 323 QLPNGLEAAYEFADRDEVRFFKGNKYWAVQGQNVLHGYPKDIYSSFGFPRTVKHIDAALS 382
+LPN ++AAYE D + F+G K+WA+ G ++L GYPK I S G P+ VK I AA+
Sbjct: 329 ELPNRIDAAYEHPSHDLIFIFRGRKFWALNGYDILEGYPKKI-SELGLPKEVKKISAAVH 387
Query: 383 EENTGKTYFFVANKYWRYDEYKRSMDPGYPKMIAHDFPGIGHKVDAVFMKDGFFYFFHGT 442
E+TGKT F N+ WRYD+ MD YP++I DFPGIG KVDAV+ K+G+ YFF+G
Sbjct: 388 FEDTGKTLLFSGNQVWRYDDTNHIMDKDYPRLIEEDFPGIGDKVDAVYEKNGYIYFFNGP 447
Query: 443 RQYKFDPKTKRILTLQKANSWFNC 466
Q+++ + RI+ + ANS C
Sbjct: 448 IQFEYSIWSNRIVRVMPANSILWC 471
>gi|73858572 matrix metalloproteinase 12 preproprotein [Homo
sapiens]
Length = 470
Score = 454 bits (1168), Expect = e-128
Identities = 231/468 (49%), Positives = 306/468 (65%), Gaps = 9/468 (1%)
Query: 7 LLLLLFWGVVSHSFPATLET--QEQDVDLVQKYLEKYYNLKNDGRQVEKRRNSGPVV-EK 63
LL+LL S + P T ++ +V ++YLEK+Y L+ + V K + SG ++ EK
Sbjct: 4 LLILLLQATASGALPLNSSTSLEKNNVLFGERYLEKFYGLEINKLPVTKMKYSGNLMKEK 63
Query: 64 LKQMQEFFGLKVTGKPDAETLKVMKQPRCGVPDVAQFVLTEGNPRWEQTHLTYRIENYTP 123
+++MQ F GLKVTG+ D TL++M PRCGVPDV F G P W + ++TYRI NYTP
Sbjct: 64 IQEMQHFLGLKVTGQLDTSTLEMMHAPRCGVPDVHHFREMPGGPVWRKHYITYRINNYTP 123
Query: 124 DLPRADVDHAIEKAFQLWSNVTPLTFTKVSEGQADIMISFVRGDHRDNSPFDGPGGNLAH 183
D+ R DVD+AI KAFQ+WSNVTPL F+K++ G ADI++ F RG H D FDG GG LAH
Sbjct: 124 DMNREDVDYAIRKAFQVWSNVTPLKFSKINTGMADILVVFARGAHGDFHAFDGKGGILAH 183
Query: 184 AFQPGPGIGGDAHFDEDERWTNNFREYNLHRVAAHELGHSLGLSHSTDIGALMYPSYTF- 242
AF PG GIGGDAHFDEDE WT + NL A HE+GHSLGL HS+D A+M+P+Y +
Sbjct: 184 AFGPGSGIGGDAHFDEDEFWTTHSGGTNLFLTAVHEIGHSLGLGHSSDPKAVMFPTYKYV 243
Query: 243 -SGDVQLAQDDIDGIQAIYGRSQNPVQPIGPQT--PKACDSKLTFDAITTIRGEVMFFKD 299
+L+ DDI GIQ++YG + + P P CD L+FDA+TT+ ++ FFKD
Sbjct: 244 DINTFRLSADDIRGIQSLYGDPKENQRLPNPDNSEPALCDPNLSFDAVTTVGNKIFFFKD 303
Query: 300 RFYMRTNPFYPEVELNFISVFWPQLPNGLEAAYEFADRDEVRFFKGNKYWAVQGQNVLHG 359
RF+ P+ +N IS WP LP+G+EAAYE R++V FK +KYW +
Sbjct: 304 RFFWLKVSERPKTSVNLISSLWPTLPSGIEAAYEIEARNQVFLFKDDKYWLISNLRPEPN 363
Query: 360 YPKDIYSSFGFPRTVKHIDAALSEENTGKTYFFVANKYWRYDEYKRSMDPGYPKMIAHDF 419
YPK I+ SFGFP VK IDAA+ +TYFFV N+YWRYDE ++ MDPGYPK+I +F
Sbjct: 364 YPKSIH-SFGFPNFVKKIDAAVFNPRFYRTYFFVDNQYWRYDERRQMMDPGYPKLITKNF 422
Query: 420 PGIGHKVDAVF-MKDGFFYFFHGTRQYKFDPKTKRILTLQKANSWFNC 466
GIG K+DAVF K+ ++YFF G+ Q+++D +RI K+NSWF C
Sbjct: 423 QGIGPKIDAVFYSKNKYYYFFQGSNQFEYDFLLQRITKTLKSNSWFGC 470
>gi|73808268 matrix metalloproteinase 27 [Homo sapiens]
Length = 513
Score = 450 bits (1157), Expect = e-126
Identities = 233/467 (49%), Positives = 309/467 (66%), Gaps = 9/467 (1%)
Query: 7 LLLLLFWGVVSHSFPATLETQ-EQDVDLVQKYLEKYYNLKNDGRQVEKRRNSGPVVEKLK 65
LLL LF+ S +FP T+ E+++ L Q YL ++Y+L+ +G + + +N + +K++
Sbjct: 5 LLLFLFFITFSSAFPLVRMTENEENMQLAQAYLNQFYSLEIEGNHLVQSKNRSLIDDKIR 64
Query: 66 QMQEFFGLKVTGKPDAETLKVMKQPRCGVPDVAQFVLTEGNPRWEQTHLTYRIENYTPDL 125
+MQ FFGL VTGK D+ TL++MK PRCGVPDV Q+ T P W + +LTYRI NYTPD+
Sbjct: 65 EMQAFFGLTVTGKLDSNTLEIMKTPRCGVPDVGQYGYTL--PGWRKYNLTYRIINYTPDM 122
Query: 126 PRADVDHAIEKAFQLWSNVTPLTFTKVSEGQADIMISFVRGDH-RDNSPFDGPGGNLAHA 184
RA VD AI++ ++WS VTPL FTK+S+G ADIMI+F H R FDGP G L HA
Sbjct: 123 ARAAVDEAIQEGLEVWSKVTPLKFTKISKGIADIMIAFRTRVHGRCPRYFDGPLGVLGHA 182
Query: 185 FQPGPGIGGDAHFDEDERWTNNFREYNLHRVAAHELGHSLGLSHSTDIGALMYPSYTFSG 244
F PGPG+GGD HFDEDE WT + +NL VAAHE GH+LGLSHS D ALM+P+Y
Sbjct: 183 FPPGPGLGGDTHFDEDENWTKDGAGFNLFLVAAHEFGHALGLSHSNDQTALMFPNYVSLD 242
Query: 245 DVQ--LAQDDIDGIQAIYGR-SQNPVQPIGPQTPKACDSKLTFDAITTIRGEVMFFKDRF 301
+ L+QDDI+GIQ+IYG + P +P P P ACD LTFDAITT R EVMFFK R
Sbjct: 243 PRKYPLSQDDINGIQSIYGGLPKEPAKPKEPTIPHACDPDLTFDAITTFRREVMFFKGRH 302
Query: 302 YMRTNPFYPEVELNFISVFWPQLPNGLEAAYEFADRDEVRFFKGNKYWAVQGQNVLHGYP 361
R +VE I+ FWP LP L+AAYE RD++ FK +W ++G VL YP
Sbjct: 303 LWRIYYDITDVEFELIASFWPSLPADLQAAYE-NPRDKILVFKDENFWMIRGYAVLPDYP 361
Query: 362 KDIYSSFGFPRTVKHIDAALSEENTGKTYFFVANKYWRYDEYKRSMDPGYPKMIAHDFPG 421
K I++ GFP VK IDAA+ ++ T KTYFFV WR+DE ++MD G+P+ + FPG
Sbjct: 362 KSIHT-LGFPGRVKKIDAAVCDKTTRKTYFFVGIWCWRFDEMTQTMDKGFPQRVVKHFPG 420
Query: 422 IGHKVDAVFMKDGFFYFFHGTRQYKFDPKTKRILTLQKANSWFNCRK 468
I +VDA F GFF+F G++Q+++D KTK I + + N+WF C++
Sbjct: 421 ISIRVDAAFQYKGFFFFSRGSKQFEYDIKTKNITRIMRTNTWFQCKE 467
>gi|45359865 matrix metalloproteinase 20 preproprotein [Homo
sapiens]
Length = 483
Score = 407 bits (1045), Expect = e-113
Identities = 207/458 (45%), Positives = 286/458 (62%), Gaps = 16/458 (3%)
Query: 22 ATLETQEQDVDLVQKYLEKYYNLKNDGRQVEKR--RNSGPVVEKLKQMQEFFGLKVTGKP 79
A+ T + L Q YL+KYY K +G Q+ + R S ++ K+K++Q FFGL+VTGK
Sbjct: 29 ASPRTWRNNYRLAQAYLDKYYTNK-EGHQIGEMVARGSNSMIRKIKELQAFFGLQVTGKL 87
Query: 80 DAETLKVMKQPRCGVPDVAQFVLTEGNPRWEQTHLTYRIENYTPDLPRADVDHAIEKAFQ 139
D T+ V+K+PRCGVPDVA + L G P+W++ LTYRI YTP + +VD A+E A Q
Sbjct: 88 DQTTMNVIKKPRCGVPDVANYRLFPGEPKWKKNTLTYRISKYTPSMSSVEVDKAVEMALQ 147
Query: 140 LWSNVTPLTFTKVSEGQADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDAHFDE 199
WS+ PL+F +++ G+ADIMISF GDH D+ PFDGP G LAHAF PG G+GGD HFD
Sbjct: 148 AWSSAVPLSFVRINSGEADIMISFENGDHGDSYPFDGPRGTLAHAFAPGEGLGGDTHFDN 207
Query: 200 DERWTNNFREYNLHRVAAHELGHSLGLSHSTDIGALMYPSYTFSG--DVQLAQDDIDGIQ 257
E+WT +NL VAAHE GH+LGL+HSTD ALMYP+Y + L +DD+ GIQ
Sbjct: 208 AEKWTMGTNGFNLFTVAAHEFGHALGLAHSTDPSALMYPTYKYKNPYGFHLPKDDVKGIQ 267
Query: 258 AIYGRSQ----NPVQPIG----PQTPKACDSKLTFDAITTIRGEVMFFKDR-FYMRTNPF 308
A+YG + P P P P CDS +FDA+T + E++ FKDR F+ R
Sbjct: 268 ALYGPRKVFLGKPTLPHAPHHKPSIPDLCDSSSSFDAVTMLGKELLLFKDRIFWRRQVHL 327
Query: 309 YPEVELNFISVFWPQLPNGLEAAYEFADRDEVRFFKGNKYWAVQGQNVLHGYPKDIYSSF 368
+ + I+ +PQL + ++AAYE A+R FFKG YW +G + G P+ IY F
Sbjct: 328 RTGIRPSTITSSFPQLMSNVDAAYEVAERGTAYFFKGPHYWITRGFQ-MQGPPRTIY-DF 385
Query: 369 GFPRTVKHIDAALSEENTGKTYFFVANKYWRYDEYKRSMDPGYPKMIAHDFPGIGHKVDA 428
GFPR V+ IDAA+ KT FFV ++Y+ YDE KR M+ YPK +F G+ ++DA
Sbjct: 386 GFPRHVQQIDAAVYLREPQKTLFFVGDEYYSYDERKRKMEKDYPKNTEEEFSGVNGQIDA 445
Query: 429 VFMKDGFFYFFHGTRQYKFDPKTKRILTLQKANSWFNC 466
+G+ YFF G + YK+D + + ++++ K++SW C
Sbjct: 446 AVELNGYIYFFSGPKTYKYDTEKEDVVSVVKSSSWIGC 483
>gi|5729929 matrix metalloproteinase 24 preproprotein [Homo sapiens]
Length = 645
Score = 298 bits (764), Expect = 5e-81
Identities = 190/473 (40%), Positives = 242/473 (51%), Gaps = 65/473 (13%)
Query: 35 QKYLEKY-YNLKNDGRQVEKRRNSGPVVEKLKQMQEFFGLKVTGKPDAETLKVMKQPRCG 93
Q +L+ Y Y L D R ++ + + MQ+F+G+ VTG D T++ MK+PRCG
Sbjct: 82 QNWLKSYGYLLPYDSR-ASALHSAKALQSAVSTMQQFYGIPVTGVLDQTTIEWMKKPRCG 140
Query: 94 VPDVAQFVLTEGNPR-------WEQTHLTYRIENYTPDLPRADVDHAIEKAFQLWSNVTP 146
VPD N R W Q H+TY I NYTP + D AI +AF +W VTP
Sbjct: 141 VPDHPHLSRRRRNKRYALTGQKWRQKHITYSIHNYTPKVGELDTRKAIRQAFDVWQKVTP 200
Query: 147 LTFTKV-------SEGQADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDAHFDE 199
LTF +V +ADIMI F G H D+SPFDG GG LAHA+ PGPGIGGD HFD
Sbjct: 201 LTFEEVPYHEIKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDS 260
Query: 200 DERWT---NNFREYNLHRVAAHELGHSLGLSHSTDIGALMYPSYTF--SGDVQLAQDDID 254
DE WT N +L VA HELGH+LGL HS+D A+M P Y + + + +L QDD+
Sbjct: 261 DEPWTLGNANHDGNDLFLVAVHELGHALGLEHSSDPSAIMAPFYQYMETHNFKLPQDDLQ 320
Query: 255 GIQAIYGRSQNPVQPIGP------------------------------------QTPKAC 278
GIQ IYG P++P P P C
Sbjct: 321 GIQKIYGPPAEPLEPTRPLPTLPVRRIHSPSERKHERQPRPPRPPLGDRPSTPGTKPNIC 380
Query: 279 DSKLTFDAITTIRGEVMFFKDRFYMR-TNPFYPEVELNFISVFWPQLPNGLEAAYEFADR 337
D F+ + RGE+ FKDR++ R N E I FW LP ++AAYE AD
Sbjct: 381 DG--NFNTVALFRGEMFVFKDRWFWRLRNNRVQEGYPMQIEQFWKGLPARIDAAYERADG 438
Query: 338 DEVRFFKGNKYWAVQGQNVLHGYPKDIYSSFGFPRTVKHIDAALSEENTGKTYFFVANKY 397
V FFKG+KYW + V GYP + G + ID AL E GKTYFF +Y
Sbjct: 439 RFV-FFKGDKYWVFKEVTVEPGYPHSL-GELGSCLPREGIDTALRWEPVGKTYFFKGERY 496
Query: 398 WRYDEYKRSMDPGYPKMIAHDFPGIGHKVDAVFM-KDGFF-YFFHGTRQYKFD 448
WRY E +R+ DPGYPK I + GI F+ K+G++ YF+ G +KFD
Sbjct: 497 WRYSEERRATDPGYPKPIT-VWKGIPQAPQGAFISKEGYYTYFYKGRDYWKFD 548
>gi|13027802 matrix metalloproteinase 16 isoform 1 preproprotein
[Homo sapiens]
Length = 607
Score = 290 bits (742), Expect = 2e-78
Identities = 180/483 (37%), Positives = 253/483 (52%), Gaps = 70/483 (14%)
Query: 34 VQKYLEKYYNLKNDGRQVEKRRNSGPVVEKLKQMQEFFGLKVTGKPDAETLKVMKQPRCG 93
V+ +L+KY L ++ R++ + L MQ+F+G+ +TGK D T+ MK+PRCG
Sbjct: 43 VEVWLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCG 102
Query: 94 VPDVAQ-----------FVLTEGNPRWEQTHLTYRIENYTPDLPRADVDHAIEKAFQLWS 142
VPD + + LT +W+ H+TY I+N TP + + AI +AF +W
Sbjct: 103 VPDQTRGSSKFHIRRKRYALT--GQKWQHKHITYSIKNVTPKVGDPETRKAIRRAFDVWQ 160
Query: 143 NVTPLTFTKVSEGQ-------ADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDA 195
NVTPLTF +V + DI I F G H D+SPFDG GG LAHA+ PGPGIGGD
Sbjct: 161 NVTPLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDT 220
Query: 196 HFDEDERWT---NNFREYNLHRVAAHELGHSLGLSHSTDIGALMYPSYTF--SGDVQLAQ 250
HFD DE WT N +L VA HELGH+LGL HS D A+M P Y + + + +L
Sbjct: 221 HFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPN 280
Query: 251 DDIDGIQAIYG--------------------------RSQNPVQPIGPQT---------P 275
DD+ GIQ IYG R + +P P T P
Sbjct: 281 DDLQGIQKIYGPPDKIPPPTRPLPTVPPHRSIPPADPRKNDRPKPPRPPTGRPSYPGAKP 340
Query: 276 KACDSKLTFDAITTIRGEVMFFKDRFY--MRTNPFYPEVELNFISVFWPQLPNGLEAAYE 333
CD F+ + +R E+ FKD+++ +R N + I+ FW LP ++A YE
Sbjct: 341 NICDG--NFNTLAILRREMFVFKDQWFWRVRNNRVMDGYPMQ-ITYFWRGLPPSIDAVYE 397
Query: 334 FADRDEVRFFKGNKYWAVQGQNVLHGYPKDIYSSFGFPRTVKHIDAALSEENTGKTYFFV 393
+D + V FFKGNKYW + + GYP D+ + G ID+A+ E+ GKTYFF
Sbjct: 398 NSDGNFV-FFKGNKYWVFKDTTLQPGYPHDLI-TLGSGIPPHGIDSAIWWEDVGKTYFFK 455
Query: 394 ANKYWRYDEYKRSMDPGYPKMIAHDFPGIGHKVDAVFM--KDGFFYFFHGTRQYKFDPKT 451
++YWRY E ++MDPGYPK I + GI F+ ++GF YF+ G +KF+ +
Sbjct: 456 GDRYWRYSEEMKTMDPGYPKPIT-VWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQI 514
Query: 452 KRI 454
++
Sbjct: 515 LKV 517
>gi|4505211 matrix metalloproteinase 15 preproprotein [Homo sapiens]
Length = 669
Score = 274 bits (701), Expect = 1e-73
Identities = 179/500 (35%), Positives = 250/500 (50%), Gaps = 89/500 (17%)
Query: 35 QKYLEKYYNLKNDGRQVEKRRNSGPVVEKLKQMQEFFGLKVTGKPDAETLKVMKQPRCGV 94
+ +L Y L R + R++ + L +MQ F+G+ VTG D ET + MK+PRCGV
Sbjct: 54 ENWLRLYGYLPQPSRHMSTMRSAQILASALAEMQRFYGIPVTGVLDEETKEWMKRPRCGV 113
Query: 95 PDVAQF-VLTEGNPR------------WEQTHLTYRIENYTPDLPRADVDHAIEKAFQLW 141
PD QF V + N R W HLT+ I+NYT L A+ +AF++W
Sbjct: 114 PD--QFGVRVKANLRRRRKRYALTGRKWNNHHLTFSIQNYTEKLGWYHSMEAVRRAFRVW 171
Query: 142 SNVTPLTFTKVS--------EGQADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGG 193
TPL F +V + +ADIM+ F G H D+SPFDG GG LAHA+ PGPG+GG
Sbjct: 172 EQATPLVFQEVPYEDIRLRRQKEADIMVLFASGFHGDSSPFDGTGGFLAHAYFPGPGLGG 231
Query: 194 DAHFDEDERWT---NNFREYNLHRVAAHELGHSLGLSHSTDIGALMYPSYTFS--GDVQL 248
D HFD DE WT + NL VA HELGH+LGL HS++ A+M P Y + + +L
Sbjct: 232 DTHFDADEPWTFSSTDLHGNNLFLVAVHELGHALGLEHSSNPNAIMAPFYQWKDVDNFKL 291
Query: 249 AQDDIDGIQAIYG-----------------------------------------RSQNPV 267
+DD+ GIQ +YG R P
Sbjct: 292 PEDDLRGIQQLYGTPDGQPQPTQPLPTVTPRRPGRPDHRPPRPPQPPPPGGKPERPPKPG 351
Query: 268 QPIGPQT--------PKACDSKLTFDAITTIRGEVMFFKDRFYMRTNPFYPEVELNF--- 316
P+ P+ P CD FD + +RGE+ FK R++ R + V N+
Sbjct: 352 PPVQPRATERPDQYGPNICDG--DFDTVAMLRGEMFVFKGRWFWRVR--HNRVLDNYPMP 407
Query: 317 ISVFWPQLPNGLEAAYEFADRDEVRFFKGNKYWAVQGQNVLHGYPKDIYSSFGFPRTVKH 376
I FW LP + AAYE D V FFKG++YW + N+ GYP+ + +S+G
Sbjct: 408 IGHFWRGLPGDISAAYERQDGRFV-FFKGDRYWLFREANLEPGYPQPL-TSYGLGIPYDR 465
Query: 377 IDAALSEENTGKTYFFVANKYWRYDEYKRSMDPGYPKMIAHDFPGIGHKVDAVFMKD--G 434
ID A+ E TG T+FF ++YWR++E + DPGYPK I+ + GI F+ +
Sbjct: 466 IDTAIWWEPTGHTFFFQEDRYWRFNEETQRGDPGYPKPIS-VWQGIPASPKGAFLSNDAA 524
Query: 435 FFYFFHGTRQYKFDPKTKRI 454
+ YF+ GT+ +KFD + R+
Sbjct: 525 YTYFYKGTKYWKFDNERLRM 544
>gi|4826834 matrix metalloproteinase 14 preproprotein [Homo sapiens]
Length = 582
Score = 272 bits (696), Expect = 4e-73
Identities = 183/497 (36%), Positives = 253/497 (50%), Gaps = 57/497 (11%)
Query: 5 PPLLLLLFWGVVSHSFPATLETQEQDVDLVQKYLEKYYNLKNDGRQVEKRRNSGPVVEKL 64
PP LLL + + A+L + + + +L++Y L + +R+ + +
Sbjct: 7 PPRCLLLPLLTLGTAL-ASLGSAQSSSFSPEAWLQQYGYLPPGDLRTHTQRSPQSLSAAI 65
Query: 65 KQMQEFFGLKVTGKPDAETLKVMKQPRCGVPD---------VAQFVLTEGNPRWEQTHLT 115
MQ+F+GL+VTGK DA+T+K M++PRCGVPD V + +W+ +T
Sbjct: 66 AAMQKFYGLQVTGKADADTMKAMRRPRCGVPDKFGAEIKANVRRKRYAIQGLKWQHNEIT 125
Query: 116 YRIENYTPDLPRADVDHAIEKAFQLWSNVTPLTFTKVS--------EGQADIMISFVRGD 167
+ I+NYTP + AI KAF++W + TPL F +V E QADIMI F G
Sbjct: 126 FCIQNYTPKVGEYATYEAIRKAFRVWESATPLRFREVPYAYIREGHEKQADIMIFFAEGF 185
Query: 168 HRDNSPFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTNNFREYN---LHRVAAHELGHSL 224
H D++PFDG GG LAHA+ PGP IGGD HFD E WT + N + VA HELGH+L
Sbjct: 186 HGDSTPFDGEGGFLAHAYFPGPNIGGDTHFDSAEPWTVRNEDLNGNDIFLVAVHELGHAL 245
Query: 225 GLSHSTDIGALMYPSYTF--SGDVQLAQDDIDGIQAIYG-----------------RSQN 265
GL HS+D A+M P Y + + + L DD GIQ +YG R
Sbjct: 246 GLEHSSDPSAIMAPFYQWMDTENFVLPDDDRRGIQQLYGGESGFPTKMPPQPRTTSRPSV 305
Query: 266 PVQPIGP-QTPKACDSKLTFDAITTIRGEVMFFKDRFYMRTN-----PFYPEVELNFISV 319
P +P P P CD FD + +RGE+ FK+R++ R YP I
Sbjct: 306 PDKPKNPTYGPNICDG--NFDTVAMLRGEMFVFKERWFWRVRNNQVMDGYPMP----IGQ 359
Query: 320 FWPQLPNGLEAAYEFADRDEVRFFKGNKYWAVQGQNVLHGYPKDIYSSFGFPRTVKHIDA 379
FW LP + AYE D V FFKG+K+W ++ GYPK I G IDA
Sbjct: 360 FWRGLPASINTAYERKDGKFV-FFKGDKHWVFDEASLEPGYPKHI-KELGRGLPTDKIDA 417
Query: 380 ALSEENTGKTYFFVANKYWRYDEYKRSMDPGYPKMIAHDFPGIGHKVDAVFM--KDGFFY 437
AL GKTYFF NKY+R++E R++D YPK I + GI FM + F Y
Sbjct: 418 ALFWMPNGKTYFFRGNKYYRFNEELRAVDSEYPKNI-KVWEGIPESPRGSFMGSDEVFTY 476
Query: 438 FFHGTRQYKFDPKTKRI 454
F+ G + +KF+ + ++
Sbjct: 477 FYKGNKYWKFNNQKLKV 493
>gi|58331148 matrix metalloproteinase 11 preproprotein [Homo
sapiens]
Length = 488
Score = 248 bits (632), Expect = 1e-65
Identities = 159/399 (39%), Positives = 215/399 (53%), Gaps = 49/399 (12%)
Query: 87 MKQPRCGVPDVA----------QFVLTEGNPRWEQTHLTYRIENYTPDLPRADVDHAIEK 136
++ PRCGVPD + +FVL+ G RWE+T LTYRI + L + V + +
Sbjct: 75 LRPPRCGVPDPSDGLSARNRQKRFVLSGG--RWEKTDLTYRILRFPWQLVQEQVRQTMAE 132
Query: 137 AFQLWSNVTPLTFTKVSEGQADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDAH 196
A ++WS+VTPLTFT+V EG+ADIMI F R H D+ PFDGPGG LAHAF P GD H
Sbjct: 133 ALKVWSDVTPLTFTEVHEGRADIMIDFARYWHGDDLPFDGPGGILAHAFFPKTHREGDVH 192
Query: 197 FDEDERWT-NNFREYNLHRVAAHELGHSLGLSHSTDIGALMYPSYTFSGDVQLAQDDIDG 255
FD DE WT + + +L +VAAHE GH LGL H+T ALM YTF + L+ DD G
Sbjct: 193 FDYDETWTIGDDQGTDLLQVAAHEFGHVLGLQHTTAAKALMSAFYTFRYPLSLSPDDCRG 252
Query: 256 IQAIYGR------------------SQNPVQPIGPQT-PKACDSKLTFDAITTIRGEVMF 296
+Q +YG+ N + P+ P P AC++ +FDA++TIRGE+ F
Sbjct: 253 VQHLYGQPWPTVTSRTPALGPQAGIDTNEIAPLEPDAPPDACEA--SFDAVSTIRGELFF 310
Query: 297 FKDRFYMR-----TNPFYPEVELNFISVFWPQLPNGLEAAYEFADRDEVRFFKGNKYWAV 351
FK F R P YP + S W LP+ ++AA+E A + + FF+G +YW
Sbjct: 311 FKAGFVWRLRGGQLQPGYPAL----ASRHWQGLPSPVDAAFEDA-QGHIWFFQGAQYWVY 365
Query: 352 QGQNVLHGYPKDIYSSFGFPRTVKHIDAALSEENTGKTYFFVANKYWRYDEYKRSMDPGY 411
G+ + G P + + G R H E K YFF YWR+ R +D
Sbjct: 366 DGEKPVLG-PAPL-TELGLVRFPVHAALVWGPEK-NKIYFFRGRDYWRFHPSTRRVDSPV 422
Query: 412 PKMIAHDFPGIGHKVDAVFM-KDGFFYFFHGTRQYKFDP 449
P+ A D+ G+ ++DA F DG+ YF G +KFDP
Sbjct: 423 PRR-ATDWRGVPSEIDAAFQDADGYAYFLRGRLYWKFDP 460
>gi|112382270 matrix metalloproteinase 17 preproprotein [Homo
sapiens]
Length = 603
Score = 239 bits (610), Expect = 4e-63
Identities = 167/485 (34%), Positives = 237/485 (48%), Gaps = 52/485 (10%)
Query: 6 PLLLLLFWGVVSHSFPATLETQEQDVDLVQKYLEKYYNLKNDGRQVEKRRNSGPVVEKLK 65
PLLLLL G + +D+ L ++L ++ L + + + + +
Sbjct: 24 PLLLLLALGTRGGCAAPAPAPRAEDLSLGVEWLSRFGYLPPADPTTGQLQTQEELSKAIT 83
Query: 66 QMQEFFGLKVTGKPDAETLKVMKQPRCGVPDVAQFVLTEGNPR--------WEQTHLTYR 117
MQ+F GL+ TG D TL +MK PRC +PD+ VLT+ R W + +L++R
Sbjct: 84 AMQQFGGLEATGILDEATLALMKTPRCSLPDLP--VLTQARRRRQAPAPTKWNKRNLSWR 141
Query: 118 IENYTPDLPRAD--VDHAIEKAFQLWSNVTPLTFTKVSEGQADIMISFVRGDHRDNSPFD 175
+ + D P V + A ++WS++ PL F +V+ ADI I F + DH D PFD
Sbjct: 142 VRTFPRDSPLGHDTVRALMYYALKVWSDIAPLNFHEVAGSAADIQIDFSKADHNDGYPFD 201
Query: 176 GPGGNLAHAFQPG-PGIGGDAHFDEDERWTNNFREYNLH-----RVAAHELGHSLGLSHS 229
GPGG +AHAF PG GD HFD+DE WT FR + H VA HE GH++GLSH
Sbjct: 202 GPGGTVAHAFFPGHHHTAGDTHFDDDEAWT--FRSSDAHGMDLFAVAVHEFGHAIGLSHV 259
Query: 230 TDIGALMYPSYTFS-GD---VQLAQDDIDGIQAIYG-------RSQNPVQPIGPQTPKAC 278
++M P Y GD L +D + +YG +Q P+ P+ P
Sbjct: 260 AAAHSIMRPYYQGPVGDPLRYGLPYEDKVRVWQLYGVRESVSPTAQPEEPPLLPEPPDNR 319
Query: 279 DS-----------KLTFDAITTIRGEVMFFKDRFYMRTNPFYPEVELNFISV--FWPQLP 325
S FDA+ IRGE FFK +++ R V L + FW LP
Sbjct: 320 SSAPPRKDVPHRCSTHFDAVAQIRGEAFFFKGKYFWRLTRDRHLVSLQPAQMHRFWRGLP 379
Query: 326 ---NGLEAAYEFADRDEVRFFKGNKYWAVQGQNVLHGYPKDIYSSFGFPRTVKHIDAALS 382
+ ++A YE ++ FFKG++YW + NV GYP+ + S F P IDAA S
Sbjct: 380 LHLDSVDAVYERTSDHKIVFFKGDRYWVFKDNNVEEGYPRPV-SDFSLP--PGGIDAAFS 436
Query: 383 EENTGKTYFFVANKYWRYDEYKRSMDPGYPKMIAHDFPGIGHKV-DAVFMKDGFFYFFHG 441
+ +TYFF YWRYD++ R MDPGYP + + G+ + DA+ DG YFF G
Sbjct: 437 WAHNDRTYFFKDQLYWRYDDHTRHMDPGYPAQ-SPLWRGVPSTLDDAMRWSDGASYFFRG 495
Query: 442 TRQYK 446
+K
Sbjct: 496 QEYWK 500
>gi|4505219 matrix metalloproteinase 7 preproprotein [Homo sapiens]
Length = 267
Score = 236 bits (602), Expect = 3e-62
Identities = 118/235 (50%), Positives = 156/235 (66%), Gaps = 11/235 (4%)
Query: 35 QKYLEKYYNLKNDGRQVEKRRNSGPVVEKLKQMQEFFGLKVTGKPDAETLKVMKQPRCGV 94
Q YL+++Y ++ +N+ + KLK+MQ+FFGL +TG ++ +++M++PRCGV
Sbjct: 36 QDYLKRFYLYDSE------TKNANSLEAKLKEMQKFFGLPITGMLNSRVIEIMQKPRCGV 89
Query: 95 PDVAQFVLTEGNPRWEQTHLTYRIENYTPDLPRADVDHAIEKAFQLWSNVTPLTFTKVSE 154
PDVA++ L +P+W +TYRI +YT DLP VD + KA +W PL F KV
Sbjct: 90 PDVAEYSLFPNSPKWTSKVVTYRIVSYTRDLPHITVDRLVSKALNMWGKEIPLHFRKVVW 149
Query: 155 GQADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTN-NFREYNLH 213
G ADIMI F RG H D+ PFDGPG LAHAF PG G+GGDAHFDEDERWT+ + N
Sbjct: 150 GTADIMIGFARGAHGDSYPFDGPGNTLAHAFAPGTGLGGDAHFDEDERWTDGSSLGINFL 209
Query: 214 RVAAHELGHSLGLSHSTDIGALMYPSYTFSGDVQ---LAQDDIDGIQAIYGRSQN 265
A HELGHSLG+ HS+D A+MYP+Y +GD Q L+QDDI GIQ +YG+ N
Sbjct: 210 YAATHELGHSLGMGHSSDPNAVMYPTYG-NGDPQNFKLSQDDIKGIQKLYGKRSN 263
>gi|189217853 matrix metalloproteinase 2 isoform b [Homo sapiens]
Length = 610
Score = 218 bits (554), Expect = 1e-56
Identities = 115/285 (40%), Positives = 162/285 (56%), Gaps = 16/285 (5%)
Query: 195 AHFDEDERWTNNF---REYNLHRVAAHELGHSLGLSHSTDIGALMYPSYTFSGDVQLAQD 251
A++D+D +W F + Y+L VAAHE GH++GL HS D GALM P YT++ + +L+QD
Sbjct: 329 ANYDDDRKW--GFCPDQGYSLFLVAAHEFGHAMGLEHSQDPGALMAPIYTYTKNFRLSQD 386
Query: 252 DIDGIQAIYGRSQN------PVQPIGPQTPKACDSKLTFDAITTIRGEVMFFKDRFYMRT 305
DI GIQ +YG S + P +GP TP+ C + FD I IRGE+ FFKDRF RT
Sbjct: 387 DIKGIQELYGASPDIDLGTGPTPTLGPVTPEICKQDIVFDGIAQIRGEIFFFKDRFIWRT 446
Query: 306 -NPFYPEVELNFISVFWPQLPNGLEAAYEFADRDEVRFFKGNKYWAVQGQNVLHGYPKDI 364
P + ++ FWP+LP ++A YE ++ FF GN+YW + GYPK +
Sbjct: 447 VTPRDKPMGPLLVATFWPELPEKIDAVYEAPQEEKAVFFAGNEYWIYSASTLERGYPKPL 506
Query: 365 YSSFGFPRTVKHIDAALSEENTGKTYFFVANKYWRYDEYKRSMDPGYPKMIAHDFPGIGH 424
+S G P V+ +DAA + KTY F +K+WRY+E K+ MDPG+PK+IA + I
Sbjct: 507 -TSLGLPPDVQRVDAAFNWSKNKKTYIFAGDKFWRYNEVKKKMDPGFPKLIADAWNAIPD 565
Query: 425 KVDAV--FMKDGFFYFFHGTRQYKFDPKTKRILTLQKANS-WFNC 466
+DAV G YFF G K + ++ + + S W C
Sbjct: 566 NLDAVVDLQGGGHSYFFKGAYYLKLENQSLKSVKFGSIKSDWLGC 610
Score = 174 bits (442), Expect = 1e-43
Identities = 78/143 (54%), Positives = 103/143 (72%)
Query: 62 EKLKQMQEFFGLKVTGKPDAETLKVMKQPRCGVPDVAQFVLTEGNPRWEQTHLTYRIENY 121
+ LK+MQ+FFGL TG D T++ M++PRCG PDVA + P+W++ +TYRI Y
Sbjct: 22 DTLKKMQKFFGLPQTGDLDQNTIETMRKPRCGNPDVANYNFFPRKPKWDKNQITYRIIGY 81
Query: 122 TPDLPRADVDHAIEKAFQLWSNVTPLTFTKVSEGQADIMISFVRGDHRDNSPFDGPGGNL 181
TPDL VD A +AFQ+WS+VTPL F+++ +G+ADIMI+F R +H D PFDG G L
Sbjct: 82 TPDLDPETVDDAFARAFQVWSDVTPLRFSRIHDGEADIMINFGRWEHGDGYPFDGKDGLL 141
Query: 182 AHAFQPGPGIGGDAHFDEDERWT 204
AHAF PG G+GGD+HFD+DE WT
Sbjct: 142 AHAFAPGTGVGGDSHFDDDELWT 164
>gi|11342666 matrix metalloproteinase 2 isoform a preproprotein
[Homo sapiens]
Length = 660
Score = 218 bits (554), Expect = 1e-56
Identities = 115/285 (40%), Positives = 162/285 (56%), Gaps = 16/285 (5%)
Query: 195 AHFDEDERWTNNF---REYNLHRVAAHELGHSLGLSHSTDIGALMYPSYTFSGDVQLAQD 251
A++D+D +W F + Y+L VAAHE GH++GL HS D GALM P YT++ + +L+QD
Sbjct: 379 ANYDDDRKW--GFCPDQGYSLFLVAAHEFGHAMGLEHSQDPGALMAPIYTYTKNFRLSQD 436
Query: 252 DIDGIQAIYGRSQN------PVQPIGPQTPKACDSKLTFDAITTIRGEVMFFKDRFYMRT 305
DI GIQ +YG S + P +GP TP+ C + FD I IRGE+ FFKDRF RT
Sbjct: 437 DIKGIQELYGASPDIDLGTGPTPTLGPVTPEICKQDIVFDGIAQIRGEIFFFKDRFIWRT 496
Query: 306 -NPFYPEVELNFISVFWPQLPNGLEAAYEFADRDEVRFFKGNKYWAVQGQNVLHGYPKDI 364
P + ++ FWP+LP ++A YE ++ FF GN+YW + GYPK +
Sbjct: 497 VTPRDKPMGPLLVATFWPELPEKIDAVYEAPQEEKAVFFAGNEYWIYSASTLERGYPKPL 556
Query: 365 YSSFGFPRTVKHIDAALSEENTGKTYFFVANKYWRYDEYKRSMDPGYPKMIAHDFPGIGH 424
+S G P V+ +DAA + KTY F +K+WRY+E K+ MDPG+PK+IA + I
Sbjct: 557 -TSLGLPPDVQRVDAAFNWSKNKKTYIFAGDKFWRYNEVKKKMDPGFPKLIADAWNAIPD 615
Query: 425 KVDAV--FMKDGFFYFFHGTRQYKFDPKTKRILTLQKANS-WFNC 466
+DAV G YFF G K + ++ + + S W C
Sbjct: 616 NLDAVVDLQGGGHSYFFKGAYYLKLENQSLKSVKFGSIKSDWLGC 660
Score = 177 bits (449), Expect = 2e-44
Identities = 84/175 (48%), Positives = 114/175 (65%), Gaps = 6/175 (3%)
Query: 30 DVDLVQKYLEKYYNLKNDGRQVEKRRNSGPVVEKLKQMQEFFGLKVTGKPDAETLKVMKQ 89
D +L +YL +Y + N + + LK+MQ+FFGL TG D T++ M++
Sbjct: 46 DKELAVQYLNTFYGCPKESC------NLFVLKDTLKKMQKFFGLPQTGDLDQNTIETMRK 99
Query: 90 PRCGVPDVAQFVLTEGNPRWEQTHLTYRIENYTPDLPRADVDHAIEKAFQLWSNVTPLTF 149
PRCG PDVA + P+W++ +TYRI YTPDL VD A +AFQ+WS+VTPL F
Sbjct: 100 PRCGNPDVANYNFFPRKPKWDKNQITYRIIGYTPDLDPETVDDAFARAFQVWSDVTPLRF 159
Query: 150 TKVSEGQADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDAHFDEDERWT 204
+++ +G+ADIMI+F R +H D PFDG G LAHAF PG G+GGD+HFD+DE WT
Sbjct: 160 SRIHDGEADIMINFGRWEHGDGYPFDGKDGLLAHAFAPGTGVGGDSHFDDDELWT 214
>gi|149999365 matrix metalloproteinase 16 isoform 2 preproprotein
[Homo sapiens]
Length = 457
Score = 212 bits (540), Expect = 5e-55
Identities = 137/371 (36%), Positives = 189/371 (50%), Gaps = 66/371 (17%)
Query: 34 VQKYLEKYYNLKNDGRQVEKRRNSGPVVEKLKQMQEFFGLKVTGKPDAETLKVMKQPRCG 93
V+ +L+KY L ++ R++ + L MQ+F+G+ +TGK D T+ MK+PRCG
Sbjct: 43 VEVWLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCG 102
Query: 94 VPDVAQ-----------FVLTEGNPRWEQTHLTYRIENYTPDLPRADVDHAIEKAFQLWS 142
VPD + + LT +W+ H+TY I+N TP + + AI +AF +W
Sbjct: 103 VPDQTRGSSKFHIRRKRYALT--GQKWQHKHITYSIKNVTPKVGDPETRKAIRRAFDVWQ 160
Query: 143 NVTPLTFTKVSEGQ-------ADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDA 195
NVTPLTF +V + DI I F G H D+SPFDG GG LAHA+ PGPGIGGD
Sbjct: 161 NVTPLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDT 220
Query: 196 HFDEDERWT---NNFREYNLHRVAAHELGHSLGLSHSTDIGALMYPSYTF--SGDVQLAQ 250
HFD DE WT N +L VA HELGH+LGL HS D A+M P Y + + + +L
Sbjct: 221 HFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPN 280
Query: 251 DDIDGIQAIYG--------------------------RSQNPVQPIGPQT---------P 275
DD+ GIQ IYG R + +P P T P
Sbjct: 281 DDLQGIQKIYGPPDKIPPPTRPLPTVPPHRSIPPADPRKNDRPKPPRPPTGRPSYPGAKP 340
Query: 276 KACDSKLTFDAITTIRGEVMFFKDRFY--MRTNPFYPEVELNFISVFWPQLPNGLEAAYE 333
CD F+ + +R E+ FKD+++ +R N + I+ FW LP ++A YE
Sbjct: 341 NICDG--NFNTLAILRREMFVFKDQWFWRVRNNRVMDGYPMQ-ITYFWRGLPPSIDAVYE 397
Query: 334 FADRDEVRFFK 344
+D + V FFK
Sbjct: 398 NSDGNFV-FFK 407
Score = 29.3 bits (64), Expect = 8.0
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Query: 390 YFFVANKYWRYDEYKRSMDPGYPKMIAHDFPGIGHKVDAVF-MKDGFFYFF 439
+ F +WR R MD GYP I + + G+ +DAV+ DG F FF
Sbjct: 358 FVFKDQWFWRVRN-NRVMD-GYPMQITYFWRGLPPSIDAVYENSDGNFVFF 406
>gi|4505213 matrix metalloproteinase 19 isoform rasi-1 preproprotein
[Homo sapiens]
Length = 508
Score = 210 bits (535), Expect = 2e-54
Identities = 160/461 (34%), Positives = 225/461 (48%), Gaps = 48/461 (10%)
Query: 37 YLEKYYNLKNDGRQVEKRRNSGP--VVEKLKQMQEFFGLKVTGKPDAETLKVMKQPRCGV 94
YL +Y L+ + +E N P + E L+ QE L V+G+ D T M+QPRCG+
Sbjct: 31 YLSQYGYLQ---KPLEGSNNFKPEDITEALRAFQEASELPVSGQLDDATRARMRQPRCGL 87
Query: 95 PD-----VAQFVLTEGNPRWEQTHLTYRIENYTPDLPRADVDHAIEKAFQLWSNVTPLTF 149
D +++L RW + HLT+RI N LP A+ +AFQ WSNV PLTF
Sbjct: 88 EDPFNQKTLKYLLLG---RWRKKHLTFRILNLPSTLPPHTARAALRQAFQDWSNVAPLTF 144
Query: 150 TKVSEGQADIMISF-VRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDAHFDEDERWT-NNF 207
+V G ADI +SF R ++ FDGPG LAHA P G HFDEDE WT +
Sbjct: 145 QEVQAGAADIRLSFHGRQSSYCSNTFDGPGRVLAHADIPEL---GSVHFDEDEFWTEGTY 201
Query: 208 REYNLHRVAAHELGHSLGLSHSTDIGALMYPSYT-FSGDVQLAQDDIDGIQAIYGR---- 262
R NL +AAHE+GH+LGL HS ALM P Y + +L DD+ GIQA+YG+
Sbjct: 202 RGVNLRIIAAHEVGHALGLGHSRYSQALMAPVYEGYRPHFKLHPDDVAGIQALYGKKSPV 261
Query: 263 --------SQNPVQPIGPQTPK----ACDSKLTFDAITT-IRGEVMFFKDRFYMRTNPFY 309
++ P P P P C S+L DA+ RG+ FK + +
Sbjct: 262 IRDEEEEETELPTVPPVPTEPSPMPDPCSSEL--DAMMLGPRGKTYAFKGDYVWTVSDSG 319
Query: 310 PEVELNFISVFWPQLPNGLEAAYEFADRDEVRFFKGNKYWAVQGQNVLHGYPKDIYSSFG 369
P L +S W LP L+AA + FFKG+K W + G+PK +
Sbjct: 320 PG-PLFRVSALWEGLPGNLDAAVYSPRTQWIHFFKGDKVWRYINFKMSPGFPKKL----- 373
Query: 370 FPRTVKHIDAALSEENTGKTYFFVANKYWRYDEYKRSMDPGYPKMIAHDFPGIGHKVDAV 429
R ++DAAL K + F + YW++DE R+ YPK I F G+ ++ A
Sbjct: 374 -NRVEPNLDAALYWPLNQKVFLFKGSGYWQWDELARTDFSSYPKPIKGLFTGVPNQPSAA 432
Query: 430 F-MKDGFFYFFHGTRQYKFDP--KTKRILTLQKANSWFNCR 467
+DG YFF G ++ + + ++ +++W +CR
Sbjct: 433 MSWQDGRVYFFKGKVYWRLNQQLRVEKGYPRNISHNWMHCR 473
>gi|11968059 matrix metalloproteinase 25 preproprotein [Homo
sapiens]
Length = 562
Score = 207 bits (527), Expect = 2e-53
Identities = 157/487 (32%), Positives = 223/487 (45%), Gaps = 54/487 (11%)
Query: 29 QDVDLVQKYLEKYYNLKNDGRQVEKRRNSGPVVEKLKQMQEFFGLKVTGKPDAETLKVMK 88
QDV L +L +Y L + ++ + + +K MQ F GL TG+ D T+ M+
Sbjct: 27 QDVSLGVDWLTRYGYLPPPHPAQAQLQSPEKLRDAIKVMQRFAGLPETGRMDPGTVATMR 86
Query: 89 QPRCGVPDVAQFVLTEGNPR--------WEQTHLTYRIENY--TPDLPRADVDHAIEKAF 138
+PRC +PDV R W++ LT+R+ ++ + L + V + A
Sbjct: 87 KPRCSLPDVLGVAGLVRRRRRYALSGSVWKKRTLTWRVRSFPQSSQLSQETVRVLMSYAL 146
Query: 139 QLWSNVTPLTFTKVSEGQA---DIMISFVRGDHRDNSPFDGPGGNLAHAFQPGP-GIGGD 194
W + LTF +V Q DI+I F R H+D+ PFDG GG LAHAF PG I GD
Sbjct: 147 MAWGMESGLTFHEVDSPQGQEPDILIDFARAFHQDSYPFDGLGGTLAHAFFPGEHPISGD 206
Query: 195 AHFDEDERWTNNFRE---YNLHRVAAHELGHSLGLSHSTDIGALMYPSYTFS-GD---VQ 247
HFD++E WT ++ +L VA HE GH+LGL HS+ ++M P Y GD +
Sbjct: 207 THFDDEETWTFGSKDGEGTDLFAVAVHEFGHALGLGHSSAPNSIMRPFYQGPVGDPDKYR 266
Query: 248 LAQDDIDGIQAIYGRSQN-------------PVQPIGPQT-------PKACDSKLTFDAI 287
L+QDD DG+Q +YG++ P QP T P C+ FDAI
Sbjct: 267 LSQDDRDGLQQLYGKAPQTPYDKPTRKPLAPPPQPPASPTHSPSFPIPDRCEG--NFDAI 324
Query: 288 TTIRGEVMFFKDRFYMRTNPFYPEVELN--FISVFWPQLP---NGLEAAYEFADRDEVRF 342
IRGE FFK ++ R P V + FW LP ++AAY +
Sbjct: 325 ANIRGETFFFKGPWFWRLQPSGQLVSPRPARLHRFWEGLPAQVRVVQAAYARHRDGRILL 384
Query: 343 FKGNKYWAVQGQNVLHGYPKDIYSSFGFPRTVKHIDAALSEENTGKTYFFVANKYWRYDE 402
F G ++W Q + L G + + + G P + +DA S GKTY +YWRYDE
Sbjct: 385 FSGPQFWVFQDRQ-LEGGARPL-TELGLP-PGEEVDAVFSWPQNGKTYLVRGRQYWRYDE 441
Query: 403 YKRSMDPGYPKMIAHDFPGIGHKVDAVFMKDGFFYFFHGTRQYKFDP---KTKRILTLQK 459
DPGYP+ ++ D G YFF G ++F KT+
Sbjct: 442 AAARPDPGYPRDLSLWEGAPPSPDDVTVSNAGDTYFFKGAHYWRFPKNSIKTEPDAPQPM 501
Query: 460 ANSWFNC 466
+W +C
Sbjct: 502 GPNWLDC 508
>gi|13236530 matrix metalloproteinase 28 isoform 1 preproprotein
[Homo sapiens]
Length = 520
Score = 201 bits (511), Expect = 1e-51
Identities = 165/494 (33%), Positives = 233/494 (47%), Gaps = 69/494 (13%)
Query: 8 LLLLFWGVVSHSFPATLETQEQDVDLVQKYLEKYYNLKNDGRQVEKRRNSGPVVEKLKQM 67
L LL WG + PA QE + + +LEKY L QV K S + ++
Sbjct: 12 LQLLLWGHLDAQ-PAERGGQELRKE-AEAFLEKYGYLNE---QVPKAPTSTRFSDAIRAF 66
Query: 68 QEFFGLKVTGKPDAETLKVMKQPRCGVPDVAQFVL-----------------------TE 104
Q L V+G D TL+ M +PRCGV D + +
Sbjct: 67 QWVSQLPVSGVLDRATLRQMTRPRCGVTDTNSYAAWAERISDLFARHRTKMRRKKRFAKQ 126
Query: 105 GNPRWEQTHLTYRIENYTPDLPRADVDHAIEKAFQLWSNVTPLTFTKV-SEGQADIMISF 163
GN +W + HL+YR+ N+ LP V A+ AFQLWSNV+ L F + + G ADI ++F
Sbjct: 127 GN-KWYKQHLSYRLVNWPEHLPEPAVRGAVRAAFQLWSNVSALEFWEAPATGPADIRLTF 185
Query: 164 VRGDHRD--NSPFDGPGGNLAHAFQPGPGIGGDAHFDEDERWT-NNFREYNLHRVAAHEL 220
+GDH D + FDGPGG LAHAF P G+AHFD+DERW+ + R NL V AHE+
Sbjct: 186 FQGDHNDGLGNAFDGPGGALAHAFLPR---RGEAHFDQDERWSLSRRRGRNLFVVLAHEI 242
Query: 221 GHSLGLSHSTDIGALMYPSYTFSG-DVQLAQDDIDGIQAIYGR----------------- 262
GH+LGL+HS ALM P Y G D L+ DD+ +Q++YG+
Sbjct: 243 GHTLGLTHSPAPRALMAPYYKRLGRDALLSWDDVLAVQSLYGKPLGGSVAVQLPGKLFTD 302
Query: 263 --SQNPVQPIG--PQT--PKACDSKLTFDAITTIRGEVMF-FKDRFYMRTNPFYPEVELN 315
+ + P G P+T PK C S +FDAIT R + ++ FK + E
Sbjct: 303 FETWDSYSPQGRRPETQGPKYCHS--SFDAITVDRQQQLYIFKGSHFWEVAADGNVSEPR 360
Query: 316 FISVFWPQLPNGLEAAYEFADRDEVRFFKGNKYWAVQGQNVLHGYPKDIYSSFGFPRTVK 375
+ W LP +EAA + + FFKG + W +G + G P+ + + G PR
Sbjct: 361 PLQERWVGLPPNIEAAAVSLNDGDFYFFKGGRCWRFRGPKPVWGLPQ-LCRAGGLPR--- 416
Query: 376 HIDAALSEENTGKTYFFVANKYWRYDEYKRSMDPGYPKMIAHDFPGIGHKVDAVFMK-DG 434
H DAAL + F +Y+ ++P YP+ + D+ GI +V + DG
Sbjct: 417 HPDAALFFPPLRRLILFKGARYYVLARGGLQVEPYYPRSL-QDWGGIPEEVSGALPRPDG 475
Query: 435 FFYFFHGTRQYKFD 448
FF R ++ D
Sbjct: 476 SIIFFRDDRYWRLD 489
>gi|74272287 matrix metalloproteinase 9 preproprotein [Homo sapiens]
Length = 707
Score = 174 bits (440), Expect = 2e-43
Identities = 90/185 (48%), Positives = 114/185 (61%), Gaps = 4/185 (2%)
Query: 20 FPATLETQEQDVDLVQKYLEKYYNLKNDGRQVEKRRNSGPVVEKLKQMQEFFGLKVTGKP 79
FP L T D L ++YL +Y R E R S + L +Q+ L TG+
Sbjct: 31 FPGDLRTNLTDRQLAEEYLYRY----GYTRVAEMRGESKSLGPALLLLQKQLSLPETGEL 86
Query: 80 DAETLKVMKQPRCGVPDVAQFVLTEGNPRWEQTHLTYRIENYTPDLPRADVDHAIEKAFQ 139
D+ TLK M+ PRCGVPD+ +F EG+ +W ++TY I+NY+ DLPRA +D A +AF
Sbjct: 87 DSATLKAMRTPRCGVPDLGRFQTFEGDLKWHHHNITYWIQNYSEDLPRAVIDDAFARAFA 146
Query: 140 LWSNVTPLTFTKVSEGQADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDAHFDE 199
LWS VTPLTFT+V ADI+I F +H D PFDG G LAHAF PGPGI GDAHFD+
Sbjct: 147 LWSAVTPLTFTRVYSRDADIVIQFGVAEHGDGYPFDGKDGLLAHAFPPGPGIQGDAHFDD 206
Query: 200 DERWT 204
DE W+
Sbjct: 207 DELWS 211
Score = 100 bits (249), Expect = 3e-21
Identities = 89/314 (28%), Positives = 129/314 (41%), Gaps = 81/314 (25%)
Query: 195 AHFDEDERWTNNF---REYNLHRVAAHELGHSLGLSHSTDIGALMYPSYTFSGDVQLAQD 251
++FD D++W F + Y+L VAAHE GH+LGL HS+ ALMYP Y F+ L +D
Sbjct: 377 SNFDSDKKW--GFCPDQGYSLFLVAAHEFGHALGLDHSSVPEALMYPMYRFTEGPPLHKD 434
Query: 252 DIDGIQAIYGRSQNP-----------------VQPIGPQT-------------------- 274
D++GI+ +YG P V P GP T
Sbjct: 435 DVNGIRHLYGPRPEPEPRPPTTTTPQPTAPPTVCPTGPPTVHPSERPTAGPTGPPSAGPT 494
Query: 275 --PKACDSKLT---------------FDAITTIRGEVMFFKDRFYMR------TNPFYPE 311
P A S T FDAI I ++ FKD Y R + P P
Sbjct: 495 GPPTAGPSTATTVPLSPVDDACNVNIFDAIAEIGNQLYLFKDGKYWRFSEGRGSRPQGPF 554
Query: 312 VELNFISVFWPQLPNGLEAAYEFADRDEVRFFKGNKYWAVQGQNVLHGYPKDIYSSFGFP 371
+ I+ WP LP L++ +E ++ FF G + W G +VL P+ + G
Sbjct: 555 L----IADKWPALPRKLDSVFEERLSKKLFFFSGRQVWVYTGASVLG--PRRL-DKLGLG 607
Query: 372 RTVKHIDAALSEENTGKTYFFVANKYWRYDEYKRSMDPGYPKMIAHDFPGI--------G 423
V + AL GK F + WR+D + +DP + FPG+
Sbjct: 608 ADVAQVTGAL-RSGRGKMLLFSGRRLWRFDVKAQMVDPRSASEVDRMFPGVPLDTHDVFQ 666
Query: 424 HKVDAVFMKDGFFY 437
++ A F +D F++
Sbjct: 667 YREKAYFCQDRFYW 680
>gi|73808266 matrix metalloproteinase 26 preproprotein [Homo
sapiens]
Length = 261
Score = 172 bits (437), Expect = 4e-43
Identities = 93/232 (40%), Positives = 129/232 (55%), Gaps = 10/232 (4%)
Query: 32 DLVQKYLEKYYNLKNDGRQVEKRRNSGPVVEKLKQMQEFFGLKVTGKPDAETLKVMKQPR 91
D V+ Y +++ K + + + E Q+ + F T D + ++ QP
Sbjct: 30 DFVEGYFHQFFLTKKESPLLTQ--------ETQTQLLQQFHRNGTDLLDMQMHALLHQPH 81
Query: 92 CGVPDVAQFVLTEGNPRWEQTHLTYRIENYTPDLPRADVDHAIEKAFQLWSNVTPLTFTK 151
CGVPD + ++ G +W + LTYRI NY D+ + V +I A +WSNVTPL F +
Sbjct: 82 CGVPDGSDTSISPGRCKWNKHTLTYRIINYPHDMKPSAVKDSIYNAVSIWSNVTPLIFQQ 141
Query: 152 VSEGQADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTNNFREYN 211
V G ADI +SF + H D PFDGPGG L HAF P G G HFD++E W+ + YN
Sbjct: 142 VQNGDADIKVSFWQWAHEDGWPFDGPGGILGHAFLPNSGNPGVVHFDKNEHWSASDTGYN 201
Query: 212 LHRVAAHELGHSLGLSHSTDIGALMYPSYTFSG--DVQLAQDDIDGIQAIYG 261
L VA HE+GHSLGL HS + ++MYP+Y + QL+ DDI IQ +YG
Sbjct: 202 LFLVATHEIGHSLGLQHSGNQSSIMYPTYWYHDPRTFQLSADDIQRIQHLYG 253
>gi|169203154 PREDICTED: similar to hCG2042634 [Homo sapiens]
Length = 358
Score = 140 bits (353), Expect = 2e-33
Identities = 81/175 (46%), Positives = 98/175 (56%), Gaps = 45/175 (25%)
Query: 36 KYLEK-YYNLKNDGRQVEKRRNSGPVVEKLKQMQEFFGLKVTGKPDAETLKVMKQPRCGV 94
KYLE YYNLK++ Q+ ++R+S PV+EKLKQMQ FFGLK
Sbjct: 146 KYLENCYYNLKSEINQIGRQRDSSPVLEKLKQMQNFFGLKD------------------- 186
Query: 95 PDVAQFVLTEGNPRWEQTHLTYRIENYTPDLPRADVDHAIEKAFQLWSNVTPLTFTKVSE 154
+NY P+LP+ DVD A KAF+LWSN + LTFT+ E
Sbjct: 187 ------------------------QNYMPNLPQEDVDRATGKAFELWSNASALTFTRDFE 222
Query: 155 GQADIMISFV-RGDHRDNSPFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTNNFR 208
+ DI++SFV D DNSPF G G LAHAF PGPGIGGD HFD DE T +FR
Sbjct: 223 SEGDIILSFVFLADLHDNSPFYGHDGCLAHAFPPGPGIGGDVHFDNDETRTKDFR 277
Score = 113 bits (282), Expect = 4e-25
Identities = 54/92 (58%), Positives = 68/92 (73%), Gaps = 3/92 (3%)
Query: 336 DRDEVRF--FKGNKYWAVQGQNVLHGYPKDIYSSFGFPRTVKHIDAALSEENTGKTYFFV 393
D DE R F+ +K+W VQ +L GYP+D+YSSF FP VK IDAA+ E++TGKT+FFV
Sbjct: 267 DNDETRTKDFRSSKHWVVQEDQLLSGYPRDVYSSFVFPERVKKIDAAIYEKDTGKTHFFV 326
Query: 394 ANKYWRYDEYKRSMDPGYPKMIAHDFPGIGHK 425
AN+YWRYDE +S+D GYPK+I D PGI K
Sbjct: 327 ANEYWRYDENMQSVDAGYPKII-DDLPGISKK 357
Score = 29.6 bits (65), Expect = 6.1
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Query: 316 FISVFWPQLPNGLEAAYEFADRDEVRFFKGNKYWAVQG--QNVLHGYPKDI 364
+ S +P+ ++AA D + FF N+YW Q+V GYPK I
Sbjct: 298 YSSFVFPERVKKIDAAIYEKDTGKTHFFVANEYWRYDENMQSVDAGYPKII 348
>gi|22218341 matrix metalloproteinase 21 preproprotein [Homo
sapiens]
Length = 569
Score = 128 bits (321), Expect = 1e-29
Identities = 126/453 (27%), Positives = 180/453 (39%), Gaps = 112/453 (24%)
Query: 60 VVEKLKQMQEFFGLKVTGKPDAETLKVMKQPRCGVPDVAQ--------------FVLTEG 105
+ E +++ Q L +G+ DA TL M +PRCGVPD+ +
Sbjct: 85 LAEAVRRFQRANALPASGELDAATLAAMNRPRCGVPDMRPPPPSAPPSPPGPPPRARSRR 144
Query: 106 NPR---------WE--------------QTHLTYRI--ENYTPDLPRADVDHAIEKAFQL 140
+PR W+ + L++R+ E + L AD + AF++
Sbjct: 145 SPRAPLSLSRRGWQPRGYPDGGAAQAFSKRTLSWRLLGEALSSQLSVADQRRIVALAFRM 204
Query: 141 WSNVTPLTFTK--VSEGQA-DIMISFVRGDHRD-NSPFDGPGGNLAHAFQPGPGIGGDAH 196
WS VTPL F + + G A DI + F RG H FDG G AHA++ G D H
Sbjct: 205 WSEVTPLDFREDLAAPGAAVDIKLGFGRGRHLGCPRAFDGSGQEFAHAWRLG-----DIH 259
Query: 197 FDEDERWTNNFRE--YNLHRVAAHELGHSLGLSHSTDIGALMYPSYTFSGDV-QLAQDDI 253
FD+DE +T + +L +VA HE+GH LGL H+ G++M P+Y +L D
Sbjct: 260 FDDDEHFTPPTSDTGISLLKVAVHEIGHVLGLPHTYRTGSIMQPNYIPQEPAFELDWSDR 319
Query: 254 DGIQAIYGRSQNPVQPIGPQTPKACDSKLTFDAITTIRGEVMFFKDRFYMRTNPFYPEVE 313
IQ +YG + FD I R + Y EV
Sbjct: 320 KAIQKLYGSCEGSFD-------------TAFDWIRKERNQ---------------YGEVM 351
Query: 314 LNFISVFWPQLPNGLEAAYEFADRDEVRFFKGNKYWAVQGQNVLHGYPKDIYSSFGFPRT 373
+ F FF+ + YW + +N Y I G+P
Sbjct: 352 VRF----------------------STYFFRNSWYWLYENRNNRTRYGDPIQILTGWPGI 389
Query: 374 VKH-IDAALS--EENTGKTYFFVANKYWRYDEYK------RSMDPGYPKMIAHDFPGIGH 424
H IDA + + YFF N+YWRYD K YPK+I+ FPGI
Sbjct: 390 PTHNIDAFVHIWTWKRDERYFFQGNQYWRYDSDKDQALTEDEQGKSYPKLISEGFPGIPS 449
Query: 425 KVDAVF--MKDGFFYFFHGTRQYKFDPKTKRIL 455
+D F + YFF + + FD R+L
Sbjct: 450 PLDTAFYDRRQKLIYFFKESLVFAFDVNRNRVL 482
>gi|169203660 PREDICTED: similar to hCG2042634 [Homo sapiens]
Length = 198
Score = 113 bits (282), Expect = 4e-25
Identities = 57/105 (54%), Positives = 70/105 (66%), Gaps = 7/105 (6%)
Query: 105 GNPRWEQTHLTYRIENYTPDLPRADVDHAIEKAFQLWSNVTPLTFTKVSEGQADIMISFV 164
G +W++ +NY P+LP+ DVD A KAF+LWSN + LTFT+ E + DI++SFV
Sbjct: 19 GIQKWQED------QNYMPNLPQEDVDRATGKAFELWSNASALTFTRDFESEGDIILSFV 72
Query: 165 -RGDHRDNSPFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTNNFR 208
D DNSPF G G LAHAF PGPGIGGD HFD DE T +FR
Sbjct: 73 FLADLHDNSPFYGHDGCLAHAFPPGPGIGGDVHFDNDETRTKDFR 117
Score = 113 bits (282), Expect = 4e-25
Identities = 54/92 (58%), Positives = 68/92 (73%), Gaps = 3/92 (3%)
Query: 336 DRDEVRF--FKGNKYWAVQGQNVLHGYPKDIYSSFGFPRTVKHIDAALSEENTGKTYFFV 393
D DE R F+ +K+W VQ +L GYP+D+YSSF FP VK IDAA+ E++TGKT+FFV
Sbjct: 107 DNDETRTKDFRSSKHWVVQEDQLLSGYPRDVYSSFVFPERVKKIDAAIYEKDTGKTHFFV 166
Query: 394 ANKYWRYDEYKRSMDPGYPKMIAHDFPGIGHK 425
AN+YWRYDE +S+D GYPK+I D PGI K
Sbjct: 167 ANEYWRYDENMQSVDAGYPKII-DDLPGISKK 197
Score = 29.6 bits (65), Expect = 6.1
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Query: 316 FISVFWPQLPNGLEAAYEFADRDEVRFFKGNKYWAVQG--QNVLHGYPKDI 364
+ S +P+ ++AA D + FF N+YW Q+V GYPK I
Sbjct: 138 YSSFVFPERVKKIDAAIYEKDTGKTHFFVANEYWRYDENMQSVDAGYPKII 188
>gi|169202084 PREDICTED: similar to hCG2042634 [Homo sapiens]
Length = 198
Score = 113 bits (282), Expect = 4e-25
Identities = 54/92 (58%), Positives = 68/92 (73%), Gaps = 3/92 (3%)
Query: 336 DRDEVRF--FKGNKYWAVQGQNVLHGYPKDIYSSFGFPRTVKHIDAALSEENTGKTYFFV 393
D DE R F+ +K+W VQ +L GYP+D+YSSF FP VK IDAA+ E++TGKT+FFV
Sbjct: 107 DNDETRTKDFRSSKHWVVQEDQLLSGYPRDVYSSFVFPERVKKIDAAIYEKDTGKTHFFV 166
Query: 394 ANKYWRYDEYKRSMDPGYPKMIAHDFPGIGHK 425
AN+YWRYDE +S+D GYPK+I D PGI K
Sbjct: 167 ANEYWRYDENMQSVDAGYPKII-DDLPGISKK 197
Score = 110 bits (276), Expect = 2e-24
Identities = 56/105 (53%), Positives = 69/105 (65%), Gaps = 7/105 (6%)
Query: 105 GNPRWEQTHLTYRIENYTPDLPRADVDHAIEKAFQLWSNVTPLTFTKVSEGQADIMISFV 164
G +W++ +NY P+LP+ DVD A KAF+LWS + LTFT+ E + DI++SFV
Sbjct: 19 GIQKWQED------QNYMPNLPQEDVDRATGKAFELWSKASALTFTRDFESEGDIILSFV 72
Query: 165 -RGDHRDNSPFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTNNFR 208
D DNSPF G G LAHAF PGPGIGGD HFD DE T +FR
Sbjct: 73 FLADLHDNSPFYGHDGCLAHAFPPGPGIGGDVHFDNDETRTKDFR 117
Score = 29.6 bits (65), Expect = 6.1
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Query: 316 FISVFWPQLPNGLEAAYEFADRDEVRFFKGNKYWAVQG--QNVLHGYPKDI 364
+ S +P+ ++AA D + FF N+YW Q+V GYPK I
Sbjct: 138 YSSFVFPERVKKIDAAIYEKDTGKTHFFVANEYWRYDENMQSVDAGYPKII 188
>gi|5902004 matrix metalloproteinase 23B precursor [Homo sapiens]
Length = 390
Score = 107 bits (267), Expect = 2e-23
Identities = 70/185 (37%), Positives = 101/185 (54%), Gaps = 22/185 (11%)
Query: 95 PDVAQFVLTEGNPRWEQTHLTYRIENYTPDL--PRADVDHAIEKAFQLWSNVTPLTFTKV 152
P ++ LT RW+ +LTYRI ++ +L PR + A+ AF++WS+V+P +F +V
Sbjct: 74 PRRRRYTLTPARLRWDHFNLTYRILSFPRNLLSPR-ETRRALAAAFRMWSDVSPFSFREV 132
Query: 153 SEGQ-ADIMISFVRGDHRD------NSPFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTN 205
+ Q +D+ I F +H D + FDGP G LAHAF P G HFD+ E W
Sbjct: 133 APEQPSDLRIGFYPINHTDCLVSALHHCFDGPTGELAHAFFPPHG---GIHFDDSEYWVL 189
Query: 206 NFREYN---------LHRVAAHELGHSLGLSHSTDIGALMYPSYTFSGDVQLAQDDIDGI 256
Y+ L VAAHE+GH+LGL HS ALM+ + T G L+QD++ G+
Sbjct: 190 GPTRYSWKKGVWLTDLVHVAAHEIGHALGLMHSQHGRALMHLNATLRGWKALSQDELWGL 249
Query: 257 QAIYG 261
+YG
Sbjct: 250 HRLYG 254
>gi|239750339 PREDICTED: hypothetical protein XP_002347374 [Homo
sapiens]
Length = 183
Score = 86.7 bits (213), Expect = 4e-17
Identities = 59/150 (39%), Positives = 80/150 (53%), Gaps = 14/150 (9%)
Query: 37 YLEKYYNLKNDGRQVEKRRNSGP--VVEKLKQMQEFFGLKVTGKPDAETLKVMKQPRCGV 94
YL +Y L+ + +E N P + E L+ QE L V+G+ D T M+QPRCG+
Sbjct: 31 YLSQYGYLQ---KPLEGSNNFKPEDITEALRAFQEASELPVSGQLDDATRARMRQPRCGL 87
Query: 95 PD-----VAQFVLTEGNPRWEQTHLTYRIENYTPDLPRADVDHAIEKAFQLWSNVTPLTF 149
D +++L RW + HLT+RI N LP A+ +AFQ WSNV PLTF
Sbjct: 88 EDPFNQKTLKYLLLG---RWRKKHLTFRILNLPSTLPPHTARAALRQAFQDWSNVAPLTF 144
Query: 150 TKVSEGQADIMISF-VRGDHRDNSPFDGPG 178
+V G ADI +SF R ++ FDGPG
Sbjct: 145 QEVQAGAADIRLSFHGRQSSYCSNTFDGPG 174
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.139 0.437
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,881,504
Number of Sequences: 37866
Number of extensions: 946586
Number of successful extensions: 2182
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 1905
Number of HSP's gapped (non-prelim): 90
length of query: 469
length of database: 18,247,518
effective HSP length: 106
effective length of query: 363
effective length of database: 14,233,722
effective search space: 5166841086
effective search space used: 5166841086
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.