Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 13124773
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|13124773 brain protein 16 [Homo sapiens]
(390 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|13124773 brain protein 16 [Homo sapiens] 780 0.0
gi|113420249 PREDICTED: hypothetical protein LOC728071 [Homo sap... 778 0.0
gi|130502162 RAS protein activator like 3 [Homo sapiens] 37 0.023
gi|110349792 growth differentiation factor 1 [Homo sapiens] 37 0.031
gi|28875784 armadillo repeat containing 5 isoform b [Homo sapiens] 35 0.12
gi|157426856 armadillo repeat containing 5 isoform a [Homo sapiens] 35 0.12
gi|239755939 PREDICTED: hypothetical protein [Homo sapiens] 34 0.20
gi|169211815 PREDICTED: keratin associated protein 4.6 [Homo sap... 34 0.20
gi|226437579 NAC alpha domain containing [Homo sapiens] 33 0.34
gi|239754540 PREDICTED: NAC alpha domain containing [Homo sapiens] 33 0.34
gi|239749105 PREDICTED: NAC alpha domain containing [Homo sapiens] 33 0.34
gi|239743134 PREDICTED: NAC alpha domain containing [Homo sapiens] 33 0.34
gi|239508792 PREDICTED: NAC alpha domain containing [Homo sapiens] 33 0.34
gi|207452735 epiplakin 1 [Homo sapiens] 33 0.34
gi|5454158 valyl-tRNA synthetase [Homo sapiens] 33 0.58
gi|157266298 anti-Mullerian hormone [Homo sapiens] 32 0.75
gi|39777606 Rho guanine nucleotide exchange factor 1 isoform 1 [... 32 0.75
gi|39777604 Rho guanine nucleotide exchange factor 1 isoform 3 [... 32 0.75
gi|15011972 Rho guanine nucleotide exchange factor 1 isoform 2 [... 32 0.75
gi|37693995 Kruppel-like factor 13 [Homo sapiens] 32 0.75
gi|149999371 hypothetical protein LOC91056 [Homo sapiens] 32 0.75
gi|156105693 PPAR-alpha interacting complex protein 285 isoform ... 32 0.98
gi|156105695 PPAR-alpha interacting complex protein 285 isoform ... 32 0.98
gi|130980075 centromere protein J [Homo sapiens] 32 1.3
gi|49574532 glycogen synthase kinase 3 alpha [Homo sapiens] 32 1.3
gi|208609985 SH2 domain containing 3A [Homo sapiens] 32 1.3
gi|10140847 homeobox A2 [Homo sapiens] 31 2.2
gi|239757749 PREDICTED: hypothetical protein [Homo sapiens] 31 2.2
gi|239752259 PREDICTED: similar to hCG1981372 [Homo sapiens] 31 2.2
gi|239751641 PREDICTED: hypothetical protein XP_002347943 [Homo ... 31 2.2
>gi|13124773 brain protein 16 [Homo sapiens]
Length = 390
Score = 780 bits (2013), Expect = 0.0
Identities = 390/390 (100%), Positives = 390/390 (100%)
Query: 1 MGEAGAGAGASGGPEASPEAEVVKLLPFLAPGARADLQAAAVRHVLALTGCGPGRALLAG 60
MGEAGAGAGASGGPEASPEAEVVKLLPFLAPGARADLQAAAVRHVLALTGCGPGRALLAG
Sbjct: 1 MGEAGAGAGASGGPEASPEAEVVKLLPFLAPGARADLQAAAVRHVLALTGCGPGRALLAG 60
Query: 61 QAALLQALMELAPASAPARDAARALVNLAADPGLHETLLAADPGLPARLMGRALDPQWPW 120
QAALLQALMELAPASAPARDAARALVNLAADPGLHETLLAADPGLPARLMGRALDPQWPW
Sbjct: 61 QAALLQALMELAPASAPARDAARALVNLAADPGLHETLLAADPGLPARLMGRALDPQWPW 120
Query: 121 AEEAAAALANLSREPAPCAALMAALAAAEPADSGLERLVRALCTPGYNARAPLHYLAPLL 180
AEEAAAALANLSREPAPCAALMAALAAAEPADSGLERLVRALCTPGYNARAPLHYLAPLL
Sbjct: 121 AEEAAAALANLSREPAPCAALMAALAAAEPADSGLERLVRALCTPGYNARAPLHYLAPLL 180
Query: 181 SNLSQRPAARAFLLDPDRCVVQRLLPLTQYPDSSVRRGGVVGTLRNCCFEHRHHEWLLGP 240
SNLSQRPAARAFLLDPDRCVVQRLLPLTQYPDSSVRRGGVVGTLRNCCFEHRHHEWLLGP
Sbjct: 181 SNLSQRPAARAFLLDPDRCVVQRLLPLTQYPDSSVRRGGVVGTLRNCCFEHRHHEWLLGP 240
Query: 241 EVDILPFLLLPLAGPEDFSEEEMERLPVDLQYLPPDKQREPDADIRKMLVEAIMLLTATA 300
EVDILPFLLLPLAGPEDFSEEEMERLPVDLQYLPPDKQREPDADIRKMLVEAIMLLTATA
Sbjct: 241 EVDILPFLLLPLAGPEDFSEEEMERLPVDLQYLPPDKQREPDADIRKMLVEAIMLLTATA 300
Query: 301 PGRQQVRDQGAYLILRELHSWEPEPDVRTACEKLIQVLIGDEPERGMENLLEVQVPEDVE 360
PGRQQVRDQGAYLILRELHSWEPEPDVRTACEKLIQVLIGDEPERGMENLLEVQVPEDVE
Sbjct: 301 PGRQQVRDQGAYLILRELHSWEPEPDVRTACEKLIQVLIGDEPERGMENLLEVQVPEDVE 360
Query: 361 QQLQQLDCREQEQLERELAPEPWVERATPT 390
QQLQQLDCREQEQLERELAPEPWVERATPT
Sbjct: 361 QQLQQLDCREQEQLERELAPEPWVERATPT 390
>gi|113420249 PREDICTED: hypothetical protein LOC728071 [Homo
sapiens]
Length = 390
Score = 778 bits (2010), Expect = 0.0
Identities = 389/390 (99%), Positives = 390/390 (100%)
Query: 1 MGEAGAGAGASGGPEASPEAEVVKLLPFLAPGARADLQAAAVRHVLALTGCGPGRALLAG 60
MGEAGAGAGASGGPEASPEAEVVKLLPFLAPGARADLQAAAVRHVLALTGCGPGRALLAG
Sbjct: 1 MGEAGAGAGASGGPEASPEAEVVKLLPFLAPGARADLQAAAVRHVLALTGCGPGRALLAG 60
Query: 61 QAALLQALMELAPASAPARDAARALVNLAADPGLHETLLAADPGLPARLMGRALDPQWPW 120
QAALLQALMELAPASAPARDAARALVNLAADPGLHETLLAADPGLPARLMGRALDPQWPW
Sbjct: 61 QAALLQALMELAPASAPARDAARALVNLAADPGLHETLLAADPGLPARLMGRALDPQWPW 120
Query: 121 AEEAAAALANLSREPAPCAALMAALAAAEPADSGLERLVRALCTPGYNARAPLHYLAPLL 180
AEEAAAALANLSREPAPCAALMAALAAAEPADSGLERLVRALCTPGYNARAPLHYLAPLL
Sbjct: 121 AEEAAAALANLSREPAPCAALMAALAAAEPADSGLERLVRALCTPGYNARAPLHYLAPLL 180
Query: 181 SNLSQRPAARAFLLDPDRCVVQRLLPLTQYPDSSVRRGGVVGTLRNCCFEHRHHEWLLGP 240
SNLSQRPAARAFLLDPDRCVVQRLLPLTQYPDSSVRRGGVVGTLRNCCFEHRHHEWLLGP
Sbjct: 181 SNLSQRPAARAFLLDPDRCVVQRLLPLTQYPDSSVRRGGVVGTLRNCCFEHRHHEWLLGP 240
Query: 241 EVDILPFLLLPLAGPEDFSEEEMERLPVDLQYLPPDKQREPDADIRKMLVEAIMLLTATA 300
EVDILPFLLLPLAGPEDFSEEEM+RLPVDLQYLPPDKQREPDADIRKMLVEAIMLLTATA
Sbjct: 241 EVDILPFLLLPLAGPEDFSEEEMQRLPVDLQYLPPDKQREPDADIRKMLVEAIMLLTATA 300
Query: 301 PGRQQVRDQGAYLILRELHSWEPEPDVRTACEKLIQVLIGDEPERGMENLLEVQVPEDVE 360
PGRQQVRDQGAYLILRELHSWEPEPDVRTACEKLIQVLIGDEPERGMENLLEVQVPEDVE
Sbjct: 301 PGRQQVRDQGAYLILRELHSWEPEPDVRTACEKLIQVLIGDEPERGMENLLEVQVPEDVE 360
Query: 361 QQLQQLDCREQEQLERELAPEPWVERATPT 390
QQLQQLDCREQEQLERELAPEPWVERATPT
Sbjct: 361 QQLQQLDCREQEQLERELAPEPWVERATPT 390
>gi|130502162 RAS protein activator like 3 [Homo sapiens]
Length = 1011
Score = 37.4 bits (85), Expect = 0.023
Identities = 65/219 (29%), Positives = 80/219 (36%), Gaps = 46/219 (21%)
Query: 41 AVRHVLALTGCGPGRALLAGQAALLQALMELAPASAPARDAARALVNLAADPG------L 94
A R L L G GPG A+L G+ AL AL EL APA R L A G +
Sbjct: 363 ARRLSLRLRGLGPGSAVL-GRVAL--ALEELDAPRAPAAGLERWFPLLGAPAGAALRARI 419
Query: 95 HETLLAADPGLP------------ARLMGRALDPQWP--WAEEAAAALANLSREPAPCAA 140
L P ARL G AL+P P EE AAA+ + R A
Sbjct: 420 RARRLRVLPSERYKELAEFLTFHYARLCG-ALEPALPAQAKEELAAAMVRVLRATGRAQA 478
Query: 141 LMAALAAAEPADSG-------LERLVRALCTPGYNARAPLHYLAPLLSNLSQRPAARA-- 191
L+ L AE A G E + Y YL L + +R A
Sbjct: 479 LVTDLGTAELARCGGREALLFRENTLATKAIDEYMKLVAQDYLQETLGQVVRRLCASTED 538
Query: 192 FLLDPDRCVVQRLLPLTQYPDSSVRRGGVVGTLRNCCFE 230
+DP +C P ++ P+ R LRN C E
Sbjct: 539 CEVDPSKC------PASELPEHQAR-------LRNSCEE 564
>gi|110349792 growth differentiation factor 1 [Homo sapiens]
Length = 372
Score = 37.0 bits (84), Expect = 0.031
Identities = 53/192 (27%), Positives = 73/192 (38%), Gaps = 41/192 (21%)
Query: 1 MGEAGAGAGASGGPEASPEAEVVKLLPFLAPGARADLQAAA----------VRHVLALTG 50
+ +AG GAGA GP + +L+P L P RA+L AA +R LAL
Sbjct: 167 VAQAGQGAGADPGP-----VLLRQLVPALGPPVRAELLGAAWARNASWPRSLRLALALRP 221
Query: 51 CGPGRALLAGQAALLQALME---LAPASAPARDA-------------ARALVNLAADPGL 94
P +A+LL ++ P + P RDA AR L + G
Sbjct: 222 RAPAACARLAEASLLLVTLDPRLCHPLARPRRDAEPVLGGGPGGACRARRLYVSFREVGW 281
Query: 95 HETLLAADPGLPARLMGRALDPQWPWAEEAAAALANLSREPA-PCAALMAALAAAEPADS 153
H ++A L G+ P AL+ PA A L A + AA P +
Sbjct: 282 HRWVIAPRGFLANYCQGQCALP---------VALSGSGGPPALNHAVLRALMHAAAPGAA 332
Query: 154 GLERLVRALCTP 165
L V A +P
Sbjct: 333 DLPCCVPARLSP 344
Score = 36.6 bits (83), Expect = 0.040
Identities = 46/169 (27%), Positives = 58/169 (34%), Gaps = 13/169 (7%)
Query: 15 EASPEAEVVKLLPFLAPGARADLQAAAVRH------VLALTGCGPGRALLAGQAAL-LQA 67
E +V+ +P RA A+A H V L+ P + L A
Sbjct: 94 ELGVAGNIVRHIPDRGAPTRASEPASAAGHCPEWTVVFDLSAVEPAERPSRARLELRFAA 153
Query: 68 LMELAPASAPARDAARALVNLAADPG---LHETLLAADPGLPARLMGRALDPQWPWAEEA 124
AP A+A ADPG L + + A P + A L+G A W
Sbjct: 154 AAAAAPEGGWELSVAQAGQGAGADPGPVLLRQLVPALGPPVRAELLGAAWARNASWPRSL 213
Query: 125 AAALANLSREPAPCAALMAALAAAEPADSGLERLVRALCTPGYNARAPL 173
ALA R PA CA L A D RL L P +A L
Sbjct: 214 RLALALRPRAPAACARLAEASLLLVTLD---PRLCHPLARPRRDAEPVL 259
>gi|28875784 armadillo repeat containing 5 isoform b [Homo sapiens]
Length = 725
Score = 35.0 bits (79), Expect = 0.12
Identities = 107/446 (23%), Positives = 160/446 (35%), Gaps = 73/446 (16%)
Query: 1 MGEAGAGAGASGGPEASPEAEVVKLL-PFLAPGARADLQAAAVRHVLALTGCGPGRALLA 59
+ + A AG + G E P L LA R A + A G P ALL
Sbjct: 16 LAQLAAAAGEALGGEKDPATNETPLSRALLALRTRHIKAAGGIERFRARGGLRPLLALLR 75
Query: 60 GQAALLQALMELAPASAPARDAARALVNLAADPGLHETLLAADPGLPARLMG-------- 111
AA A + P SAP+ A+ A A + ++ P P RL
Sbjct: 76 RAAAAGSAPSQAGPGSAPSSAASGASSPAPASGPAPSAVSSSSPTPPVRLRKTLDLALSI 135
Query: 112 --------------RALDPQWPWA------------EEAAAALANLSREPAPCA------ 139
R L P A AL NL+ EP C
Sbjct: 136 LADCCTEGACRTEVRRLGGILPLVTILQCMKTDSIQNRTARALGNLAMEPESCGDIHCAG 195
Query: 140 ---ALMAALAAAEPADSGLERLVRALCTPGYNARAPLHYLAPLLSNLSQRPAARAFLLDP 196
L+ +L A + + L+ +VRAL A +P H LA L + RP A P
Sbjct: 196 AVPLLVESLTACQDSQC-LQSVVRALRN---LADSPQHRLA-LAQQGAVRPLAELLATAP 250
Query: 197 DR----CVVQRLLPLTQYPD----SSVRRGGVVGTLRNCCFEHRHHEWLLGPEVDILPFL 248
D +V+ LL L++ + GG +G L + H G + +
Sbjct: 251 DAALTLALVRALLELSRGCSRACAEQLSLGGGLGPLVSLA-SHPKRAVREGTILILANLC 309
Query: 249 LLPLAGPEDFSEEEMERLPVDLQYLPPDKQREPDA---DIRKMLVEAIMLLTATAPGRQQ 305
L P + +E L +L+ ++R+P+ ++ LV A+ LL A R +
Sbjct: 310 AQGLIRPALGNAGGVEVLVDELR-----QRRDPNGASPTSQQPLVRAVCLLCREAINRAR 364
Query: 306 VRDQGAYLILRELHSWEPEPDVRTACEKLIQVLIGDEPERGMENLLEVQVPEDVEQQLQQ 365
+RD G +L L +P +++ L+G + G L +Q V Q
Sbjct: 365 LRDAGGLDLLMGLLR---DPRASAWHPRIVAALVGFLYDTGA--LGRLQALGLVPLLAGQ 419
Query: 366 L--DCREQEQLERELAPEPWVERATP 389
L + E+E+ RE A + E TP
Sbjct: 420 LCGEAGEEEEEGREAASWDFPEERTP 445
>gi|157426856 armadillo repeat containing 5 isoform a [Homo sapiens]
Length = 935
Score = 35.0 bits (79), Expect = 0.12
Identities = 107/446 (23%), Positives = 160/446 (35%), Gaps = 73/446 (16%)
Query: 1 MGEAGAGAGASGGPEASPEAEVVKLL-PFLAPGARADLQAAAVRHVLALTGCGPGRALLA 59
+ + A AG + G E P L LA R A + A G P ALL
Sbjct: 16 LAQLAAAAGEALGGEKDPATNETPLSRALLALRTRHIKAAGGIERFRARGGLRPLLALLR 75
Query: 60 GQAALLQALMELAPASAPARDAARALVNLAADPGLHETLLAADPGLPARLMG-------- 111
AA A + P SAP+ A+ A A + ++ P P RL
Sbjct: 76 RAAAAGSAPSQAGPGSAPSSAASGASSPAPASGPAPSAVSSSSPTPPVRLRKTLDLALSI 135
Query: 112 --------------RALDPQWPWA------------EEAAAALANLSREPAPCA------ 139
R L P A AL NL+ EP C
Sbjct: 136 LADCCTEGACRTEVRRLGGILPLVTILQCMKTDSIQNRTARALGNLAMEPESCGDIHCAG 195
Query: 140 ---ALMAALAAAEPADSGLERLVRALCTPGYNARAPLHYLAPLLSNLSQRPAARAFLLDP 196
L+ +L A + + L+ +VRAL A +P H LA L + RP A P
Sbjct: 196 AVPLLVESLTACQDSQC-LQSVVRALRN---LADSPQHRLA-LAQQGAVRPLAELLATAP 250
Query: 197 DR----CVVQRLLPLTQYPD----SSVRRGGVVGTLRNCCFEHRHHEWLLGPEVDILPFL 248
D +V+ LL L++ + GG +G L + H G + +
Sbjct: 251 DAALTLALVRALLELSRGCSRACAEQLSLGGGLGPLVSLA-SHPKRAVREGTILILANLC 309
Query: 249 LLPLAGPEDFSEEEMERLPVDLQYLPPDKQREPDA---DIRKMLVEAIMLLTATAPGRQQ 305
L P + +E L +L+ ++R+P+ ++ LV A+ LL A R +
Sbjct: 310 AQGLIRPALGNAGGVEVLVDELR-----QRRDPNGASPTSQQPLVRAVCLLCREAINRAR 364
Query: 306 VRDQGAYLILRELHSWEPEPDVRTACEKLIQVLIGDEPERGMENLLEVQVPEDVEQQLQQ 365
+RD G +L L +P +++ L+G + G L +Q V Q
Sbjct: 365 LRDAGGLDLLMGLLR---DPRASAWHPRIVAALVGFLYDTGA--LGRLQALGLVPLLAGQ 419
Query: 366 L--DCREQEQLERELAPEPWVERATP 389
L + E+E+ RE A + E TP
Sbjct: 420 LCGEAGEEEEEGREAASWDFPEERTP 445
>gi|239755939 PREDICTED: hypothetical protein [Homo sapiens]
Length = 313
Score = 34.3 bits (77), Expect = 0.20
Identities = 50/172 (29%), Positives = 68/172 (39%), Gaps = 24/172 (13%)
Query: 37 LQAAAVRHVLALTGCGPGRALLAGQAAL----LQALMELAPASAPARDAARALVNLAADP 92
L A VR + GP R +GQA L L+ L LAP A RD + D
Sbjct: 110 LSAGRVREKRGVGAGGPVRP--SGQAWLAHGVLRTLTYLAPDLADDRDQQQDAAQRQEDV 167
Query: 93 -GL-----HETLLAADPGLPARLMGRAL----DPQWPWAEEAAAALANLSREPAPCAALM 142
G+ H+ L+ + L G AL D W A + + P L
Sbjct: 168 LGIVHHLGHQHQLSVECVKSLPLHGPALRRQNDKHMSWGRTLRA-----TAQMPPNTFLC 222
Query: 143 AALAAAEPADSGLERLV---RALCTPGYNARAPLHYLAPLLSNLSQRPAARA 191
A L+ + P S L+ ++ R L PG+ ARAP+ +P N PA A
Sbjct: 223 ARLSFSPPQASRLKHVLEPARDLLPPGHKARAPIPLRSPTHRNARVLPAPSA 274
>gi|169211815 PREDICTED: keratin associated protein 4.6 [Homo
sapiens]
Length = 288
Score = 34.3 bits (77), Expect = 0.20
Identities = 50/189 (26%), Positives = 74/189 (39%), Gaps = 32/189 (16%)
Query: 10 ASGGPEASPEAEVVKLLPFLAPGARADLQAAAVRHVLALTGCGPGRALLAGQAALLQALM 69
A+G P A+P A + P A AD AA+ L P A+ A A ++
Sbjct: 109 AAGPPAAAPAA--------VCPAA-ADPSAAS------LCAASPPAAVPAAVPAAVRP-- 151
Query: 70 ELAPASAPARDAARALVNLAADPGLHETLLAADP--GLPARLMGRALDPQWPWAEEAAAA 127
PA+ P A A+ AADP +L AA P +PA A+ P AA
Sbjct: 152 ---PAAGPPAAALAAVYPAAADPSA-ASLCAASPLAAVPAAASPAAVAP---------AA 198
Query: 128 LANLSREPAPCAALMAALAAAEPADSGLERLVRALCTPGYNARAPLHYLAPLLSNLSQRP 187
+ + P+ + A+ AA PA + P ARA A + ++++ P
Sbjct: 199 VCPGAAGPSAASLCAASQPAAVPAAASPAAAAPLAVNPAAAARAAAAPAAACVQSVAESP 258
Query: 188 AARAFLLDP 196
A + P
Sbjct: 259 ATPLAIAQP 267
Score = 33.1 bits (74), Expect = 0.44
Identities = 29/97 (29%), Positives = 42/97 (43%), Gaps = 5/97 (5%)
Query: 73 PASAPARDAARALVNLAADPGLHETLLAADPGLPARLMGRALDPQWPWAEEAAAALANL- 131
PA+ P A A+ AADP A+ P + A+ P P A AAALA +
Sbjct: 108 PAAGPPAAAPAAVCPAAADPSAASLCAASPPAAVPAAVPAAVRP--PAAGPPAAALAAVY 165
Query: 132 --SREPAPCAALMAALAAAEPADSGLERLVRALCTPG 166
+ +P+ + A+ AA PA + + A PG
Sbjct: 166 PAAADPSAASLCAASPLAAVPAAASPAAVAPAAVCPG 202
>gi|226437579 NAC alpha domain containing [Homo sapiens]
Length = 1562
Score = 33.5 bits (75), Expect = 0.34
Identities = 37/133 (27%), Positives = 50/133 (37%), Gaps = 20/133 (15%)
Query: 37 LQAAAVRHVLALTGCGPGRALLAGQAALLQALMELAPASAPARDAARALVNLAADPGLHE 96
L A + + A GC PG +A A Q + A PA + A + +P +
Sbjct: 940 LAVATPQTLQAEAGCAPGTEPVATMA---QQEVGEALGPRPAPEEKNAALPTVPEPAALD 996
Query: 97 TLLAADPGLPARLMGRALDPQWPWAEEAAAALANLSREPAPCAALMAALAAAEPADSGLE 156
+ DP PA G PWA ++E A M AL+ EPA E
Sbjct: 997 QVQQDDPQ-PAAEAGT------PWA----------AQEDADSTLGMEALSLPEPASGAGE 1039
Query: 157 RLVRALCTPGYNA 169
+ AL PG A
Sbjct: 1040 EIAEALSRPGREA 1052
>gi|239754540 PREDICTED: NAC alpha domain containing [Homo sapiens]
Length = 1522
Score = 33.5 bits (75), Expect = 0.34
Identities = 37/133 (27%), Positives = 50/133 (37%), Gaps = 20/133 (15%)
Query: 37 LQAAAVRHVLALTGCGPGRALLAGQAALLQALMELAPASAPARDAARALVNLAADPGLHE 96
L A + + A GC PG +A A Q + A PA + A + +P +
Sbjct: 900 LAVATPQTLQAEAGCAPGTEPVATMA---QQEVGEALGPRPAPEEKNAALPTVPEPAALD 956
Query: 97 TLLAADPGLPARLMGRALDPQWPWAEEAAAALANLSREPAPCAALMAALAAAEPADSGLE 156
+ DP PA G PWA ++E A M AL+ EPA E
Sbjct: 957 QVQQDDPQ-PAAEAGT------PWA----------AQEDADSTLGMEALSLPEPASGAGE 999
Query: 157 RLVRALCTPGYNA 169
+ AL PG A
Sbjct: 1000 EIAEALSRPGREA 1012
>gi|239749105 PREDICTED: NAC alpha domain containing [Homo sapiens]
Length = 1522
Score = 33.5 bits (75), Expect = 0.34
Identities = 37/133 (27%), Positives = 50/133 (37%), Gaps = 20/133 (15%)
Query: 37 LQAAAVRHVLALTGCGPGRALLAGQAALLQALMELAPASAPARDAARALVNLAADPGLHE 96
L A + + A GC PG +A A Q + A PA + A + +P +
Sbjct: 900 LAVATPQTLQAEAGCAPGTEPVATMA---QQEVGEALGPRPAPEEKNAALPTVPEPAALD 956
Query: 97 TLLAADPGLPARLMGRALDPQWPWAEEAAAALANLSREPAPCAALMAALAAAEPADSGLE 156
+ DP PA G PWA ++E A M AL+ EPA E
Sbjct: 957 QVQQDDPQ-PAAEAGT------PWA----------AQEDADSTLGMEALSLPEPASGAGE 999
Query: 157 RLVRALCTPGYNA 169
+ AL PG A
Sbjct: 1000 EIAEALSRPGREA 1012
>gi|239743134 PREDICTED: NAC alpha domain containing [Homo sapiens]
Length = 1562
Score = 33.5 bits (75), Expect = 0.34
Identities = 37/133 (27%), Positives = 50/133 (37%), Gaps = 20/133 (15%)
Query: 37 LQAAAVRHVLALTGCGPGRALLAGQAALLQALMELAPASAPARDAARALVNLAADPGLHE 96
L A + + A GC PG +A A Q + A PA + A + +P +
Sbjct: 940 LAVATPQTLQAEAGCAPGTEPVATMA---QQEVGEALGPRPAPEEKNAALPTVPEPAALD 996
Query: 97 TLLAADPGLPARLMGRALDPQWPWAEEAAAALANLSREPAPCAALMAALAAAEPADSGLE 156
+ DP PA G PWA ++E A M AL+ EPA E
Sbjct: 997 QVQQDDPQ-PAAEAGT------PWA----------AQEDADSTLGMEALSLPEPASGAGE 1039
Query: 157 RLVRALCTPGYNA 169
+ AL PG A
Sbjct: 1040 EIAEALSRPGREA 1052
>gi|239508792 PREDICTED: NAC alpha domain containing [Homo sapiens]
Length = 1522
Score = 33.5 bits (75), Expect = 0.34
Identities = 37/133 (27%), Positives = 50/133 (37%), Gaps = 20/133 (15%)
Query: 37 LQAAAVRHVLALTGCGPGRALLAGQAALLQALMELAPASAPARDAARALVNLAADPGLHE 96
L A + + A GC PG +A A Q + A PA + A + +P +
Sbjct: 900 LAVATPQTLQAEAGCAPGTEPVATMA---QQEVGEALGPRPAPEEKNAALPTVPEPAALD 956
Query: 97 TLLAADPGLPARLMGRALDPQWPWAEEAAAALANLSREPAPCAALMAALAAAEPADSGLE 156
+ DP PA G PWA ++E A M AL+ EPA E
Sbjct: 957 QVQQDDPQ-PAAEAGT------PWA----------AQEDADSTLGMEALSLPEPASGAGE 999
Query: 157 RLVRALCTPGYNA 169
+ AL PG A
Sbjct: 1000 EIAEALSRPGREA 1012
>gi|207452735 epiplakin 1 [Homo sapiens]
Length = 5090
Score = 33.5 bits (75), Expect = 0.34
Identities = 53/177 (29%), Positives = 73/177 (41%), Gaps = 16/177 (9%)
Query: 26 LPFLAPGARADLQAA---AVRHVLALTGCGPGRALL--AGQAALLQALME-LAPASAPAR 79
L LA G ++ Q A AV+ L TGC G L +A++ QA+ + L P R
Sbjct: 1219 LEALAQGTQSPAQVAEQPAVKACLWGTGCVAGVLLQPSGAKASIAQAVRDGLLPTGLGQR 1278
Query: 80 DA-ARALVNLAADPGLHETLLAADPGLPARLMGRALDPQWPWAEEAAAALANLSREPAPC 138
A+ DP L+ L+ + + L+GR L Q AE AAA + A
Sbjct: 1279 LLEAQVASGFLVDP-LNNQRLSVEDAVKVGLVGRELSEQLGQAERAAAGYPD-PYSRASL 1336
Query: 139 AALMAALAAAEPADSGLERLVRALCTPGYNARAPLHYLAPLLSNLSQRPAARAFLLD 195
+ A P + GL L L T G P+H + +L Q A R LLD
Sbjct: 1337 SLWQAMEKGLVPQNEGLPLLQVQLATGG--VVDPVHGV-----HLPQAAACRLGLLD 1386
>gi|5454158 valyl-tRNA synthetase [Homo sapiens]
Length = 1264
Score = 32.7 bits (73), Expect = 0.58
Identities = 50/159 (31%), Positives = 60/159 (37%), Gaps = 29/159 (18%)
Query: 2 GEAGAGAGASGG--------PEASPEAEVVKLLPFL--APGARADLQAAAVRHVL---AL 48
GEAG G G G P S LP L PG A AV +L L
Sbjct: 25 GEAGEGPGWGGAHPRICLQPPPTSRTPFPPPRLPALEQGPGGLWVWGATAVAQLLWPAGL 84
Query: 49 TGCGPGRALLAGQAALLQALMELAPASAPARDAARALVNLAADPGLHETLLAADPGLPAR 108
G G RA + Q + A EL PA+ A A L + A DP + +L A
Sbjct: 85 GGPGGSRAAVLVQQWVSYADTELIPAACGATLPALGLRSSAQDP---QAVLGA------- 134
Query: 109 LMGRALDPQWPWAEEAAAALANLSREPAPCAALMAALAA 147
+GRAL P W L AP A +AA+ A
Sbjct: 135 -LGRALSPLEEWLR-----LHTYLAGEAPTLADLAAVTA 167
>gi|157266298 anti-Mullerian hormone [Homo sapiens]
Length = 560
Score = 32.3 bits (72), Expect = 0.75
Identities = 31/80 (38%), Positives = 37/80 (46%), Gaps = 9/80 (11%)
Query: 135 PAPCAALMAALAAAEPADSGLERLVRALCTPGYNARAPLHYLAP--------LLSNLSQR 186
P P A L + +A+P L RLVRAL P A AP L P L NLS
Sbjct: 274 PRPSAELEESPPSADPFLETLTRLVRALRVPPARASAPRLALDPDALAGFPQGLVNLSD- 332
Query: 187 PAARAFLLDPDRCVVQRLLP 206
PAA LLD + ++ L P
Sbjct: 333 PAALERLLDGEEPLLLLLRP 352
>gi|39777606 Rho guanine nucleotide exchange factor 1 isoform 1
[Homo sapiens]
Length = 927
Score = 32.3 bits (72), Expect = 0.75
Identities = 22/63 (34%), Positives = 27/63 (42%), Gaps = 10/63 (15%)
Query: 3 EAGAGAGASGGPEASPEAEVVKLLPFLAPGARADLQAAAVRHVLAL----------TGCG 52
E G G + +A E + LLPF PG L A A+R VL+L G G
Sbjct: 804 ENGNGGRETSPADARTERILSDLLPFCRPGPEGQLAATALRKVLSLKQLLFPAEEDNGAG 863
Query: 53 PGR 55
P R
Sbjct: 864 PPR 866
>gi|39777604 Rho guanine nucleotide exchange factor 1 isoform 3
[Homo sapiens]
Length = 879
Score = 32.3 bits (72), Expect = 0.75
Identities = 22/63 (34%), Positives = 27/63 (42%), Gaps = 10/63 (15%)
Query: 3 EAGAGAGASGGPEASPEAEVVKLLPFLAPGARADLQAAAVRHVLAL----------TGCG 52
E G G + +A E + LLPF PG L A A+R VL+L G G
Sbjct: 756 ENGNGGRETSPADARTERILSDLLPFCRPGPEGQLAATALRKVLSLKQLLFPAEEDNGAG 815
Query: 53 PGR 55
P R
Sbjct: 816 PPR 818
>gi|15011972 Rho guanine nucleotide exchange factor 1 isoform 2
[Homo sapiens]
Length = 912
Score = 32.3 bits (72), Expect = 0.75
Identities = 22/63 (34%), Positives = 27/63 (42%), Gaps = 10/63 (15%)
Query: 3 EAGAGAGASGGPEASPEAEVVKLLPFLAPGARADLQAAAVRHVLAL----------TGCG 52
E G G + +A E + LLPF PG L A A+R VL+L G G
Sbjct: 789 ENGNGGRETSPADARTERILSDLLPFCRPGPEGQLAATALRKVLSLKQLLFPAEEDNGAG 848
Query: 53 PGR 55
P R
Sbjct: 849 PPR 851
>gi|37693995 Kruppel-like factor 13 [Homo sapiens]
Length = 288
Score = 32.3 bits (72), Expect = 0.75
Identities = 38/133 (28%), Positives = 44/133 (33%), Gaps = 17/133 (12%)
Query: 9 GASGGPEASPEAEVVKLLPFLAP-GARADLQAAAVRHVLALTGCGPGRALLAGQAALLQA 67
G GPE+ PE V P L R D G A L A +L
Sbjct: 26 GPREGPESRPEGAAVAATPTLPRVEERRD---------------GKDSASLFVVARILAD 70
Query: 68 LMELAPASAPARDAARALVNLAADPGLHETLLAADPGLPARLMGRALDPQWPWAEEAAAA 127
L + APA APA A A P A +P P A P W+E A
Sbjct: 71 LNQQAPAPAPAERREGAAARKARTP-CRLPPPAPEPTSPGAEGAAAAPPSPAWSEPEPEA 129
Query: 128 LANLSREPAPCAA 140
REP P +
Sbjct: 130 GLEPEREPGPAGS 142
>gi|149999371 hypothetical protein LOC91056 [Homo sapiens]
Length = 821
Score = 32.3 bits (72), Expect = 0.75
Identities = 44/160 (27%), Positives = 60/160 (37%), Gaps = 34/160 (21%)
Query: 8 AGASGGPEASPEAEVVKLLPFLAPGA-----------RADLQAAAVRHVLALTGCGPGRA 56
AG + GP + ++ LL LA G+ + LQA A + L C PG
Sbjct: 49 AGGALGPTSGASCRLLPLLLGLAAGSDLGRGFVPASEQRPLQATACECLRELESCKPG-- 106
Query: 57 LLAGQAALLQALM----ELAPASAPARDAARALVNLAADPGLHETLLAADPGLPA----- 107
LL G LL+ L+ + P S A R + L + G L D P
Sbjct: 107 LLGGSLGLLRGLLGQEGPVQPLSLLLALALRNTLVLQSRVGAGLGGLLTDKVSPTGGGPW 166
Query: 108 ----------RLMGRALDPQWPWAEEAAAALANLSREPAP 137
RL +A P WP AEE + +RE +P
Sbjct: 167 DWTLVEEGDGRLQPQA--PSWPAAEEGEGERSLTAREHSP 204
>gi|156105693 PPAR-alpha interacting complex protein 285 isoform 1
[Homo sapiens]
Length = 2649
Score = 32.0 bits (71), Expect = 0.98
Identities = 38/123 (30%), Positives = 48/123 (39%), Gaps = 18/123 (14%)
Query: 5 GAGAGASGGPEASPEAEVVKLLPFLAPGARADLQAAAVRHVLALTGCGPG-RALLAGQAA 63
G AGA+G EA+PE G A+ QAA V A+ PG AL
Sbjct: 965 GTQAGAAGNWEAAPE----------PVGDLAEEQAAV---VTAMVKAEPGDEALSPASRD 1011
Query: 64 LLQALMELAPASAPARDAARALVNLAADPGLHETLLAADPGLPARLMGRALDPQWPWAEE 123
+ + A+APA DA + V PG AA G+ + A WPW E
Sbjct: 1012 ITATTAQTEAAAAPAGDAVKEDV----VPGACAAGAAAAAGVESTEAEDAEADFWPWDGE 1067
Query: 124 AAA 126
A
Sbjct: 1068 LNA 1070
>gi|156105695 PPAR-alpha interacting complex protein 285 isoform 2
[Homo sapiens]
Length = 2080
Score = 32.0 bits (71), Expect = 0.98
Identities = 38/123 (30%), Positives = 48/123 (39%), Gaps = 18/123 (14%)
Query: 5 GAGAGASGGPEASPEAEVVKLLPFLAPGARADLQAAAVRHVLALTGCGPG-RALLAGQAA 63
G AGA+G EA+PE G A+ QAA V A+ PG AL
Sbjct: 396 GTQAGAAGNWEAAPE----------PVGDLAEEQAAV---VTAMVKAEPGDEALSPASRD 442
Query: 64 LLQALMELAPASAPARDAARALVNLAADPGLHETLLAADPGLPARLMGRALDPQWPWAEE 123
+ + A+APA DA + V PG AA G+ + A WPW E
Sbjct: 443 ITATTAQTEAAAAPAGDAVKEDV----VPGACAAGAAAAAGVESTEAEDAEADFWPWDGE 498
Query: 124 AAA 126
A
Sbjct: 499 LNA 501
>gi|130980075 centromere protein J [Homo sapiens]
Length = 1338
Score = 31.6 bits (70), Expect = 1.3
Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 16/120 (13%)
Query: 253 AGPEDFSEEEMERLPVDLQYLPPDKQREPDADIRKMLVEAIMLLTATAPGRQQVRDQGAY 312
A P FSE + + PV+ L + + P E+I+ Q+ D
Sbjct: 259 ASPNLFSEAQYQEAPVEKNNLKEENRNHPTG-------ESILCWEKVTEQIQEAND---- 307
Query: 313 LILRELHSWEPEPDVRTACEKLIQVLIGDEPERGMENLLEVQVPEDVEQQLQQLDCREQE 372
+ L + +V E+ I+ IG E ++ E+ LE Q+ + EQ+L+Q +E E
Sbjct: 308 ---KNLQKHDDSSEVANIEERPIKAAIG-ERKQTFEDYLEEQIQLE-EQELKQKQLKEAE 362
>gi|49574532 glycogen synthase kinase 3 alpha [Homo sapiens]
Length = 483
Score = 31.6 bits (70), Expect = 1.3
Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 8/55 (14%)
Query: 2 GEAGAGAGASGGPEASPEAEVVKLLPFLAPGARADLQAAAVRHVLALTGCGPGRA 56
G G+G G SGGP A F PG + + V V+A G GP R+
Sbjct: 68 GPGGSGGGGSGGPGAGTS--------FPPPGVKLGRDSGKVTTVVATLGQGPERS 114
>gi|208609985 SH2 domain containing 3A [Homo sapiens]
Length = 576
Score = 31.6 bits (70), Expect = 1.3
Identities = 46/146 (31%), Positives = 58/146 (39%), Gaps = 33/146 (22%)
Query: 38 QAAAVRHVLALTGC-GPGRALLAGQAALLQALMELAPASAPARDAARALVNLAADPGL-- 94
Q A+ LA+ GC GP L +AA L+ L+ELA A P AA L LAA G
Sbjct: 368 QTLALAGALAVLGCSGP----LEERAAALRGLVELALALRPG--AAGDLPGLAAVMGALL 421
Query: 95 ------------------HETLLAADPGLPARLMGRALDPQWPWAEEAAAALANLSREPA 136
E LA + L + RALD + AL ++ A
Sbjct: 422 MPQVSRLEHTWRQLRRSHTEAALAFEQELKPLM--RALDEGAGPCDPGEVALPHV----A 475
Query: 137 PCAALMAALAAAEPADSGLERLVRAL 162
P L+ A P D ERL+R L
Sbjct: 476 PMVRLLEGEEVAGPLDESCERLLRTL 501
>gi|10140847 homeobox A2 [Homo sapiens]
Length = 376
Score = 30.8 bits (68), Expect = 2.2
Identities = 31/100 (31%), Positives = 40/100 (40%), Gaps = 4/100 (4%)
Query: 111 GRALDPQWPWAEEAAAALANLSREPAPCAALMAALAAAEPAD-SGLERLVRALCTPGYNA 169
G P++PW +E AA P AA A AA PA S E L A + G +
Sbjct: 88 GALQPPEYPWMKEKKAAKKTAL---LPAAAAAATAAATGPACLSHKESLEIADGSGGGSR 144
Query: 170 RAPLHYLAPLLSNLSQRPAARAFLLDPDRCVVQRLLPLTQ 209
R Y L L + +L P R + LL LT+
Sbjct: 145 RLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTE 184
>gi|239757749 PREDICTED: hypothetical protein [Homo sapiens]
Length = 264
Score = 30.8 bits (68), Expect = 2.2
Identities = 48/157 (30%), Positives = 56/157 (35%), Gaps = 20/157 (12%)
Query: 4 AGAGAGASGGPEASPEAEVVKLLPFLAPGARADLQAAAVRHVLALTGCGPGRALLAGQAA 63
A G G G P L A A AA+ R V A G R LL A
Sbjct: 53 AAGGRGRETGNAQGPR------LALQARAAAPAFPAASRRSVPAPRG----RRLLLPGAV 102
Query: 64 LLQALMELAPASAPA---RDAARALVNLAADPGLHETLLAADPGLPARLMGRALDPQWPW 120
A+ + P S P R AARA A GL P R G ++D P
Sbjct: 103 AACAVSDGQPLSPPLRQPRPAARAPEGALASCGLRAGWAGWPPQAAWRAWGASVDAAAP- 161
Query: 121 AEEAAAALANL------SREPAPCAALMAALAAAEPA 151
EAA+A A L +R P P M A A+ A
Sbjct: 162 PSEAASAEARLPERSGPARRPGPECVPMKAPGLAQAA 198
>gi|239752259 PREDICTED: similar to hCG1981372 [Homo sapiens]
Length = 317
Score = 30.8 bits (68), Expect = 2.2
Identities = 48/157 (30%), Positives = 56/157 (35%), Gaps = 20/157 (12%)
Query: 4 AGAGAGASGGPEASPEAEVVKLLPFLAPGARADLQAAAVRHVLALTGCGPGRALLAGQAA 63
A G G G P L A A AA+ R V A G R LL A
Sbjct: 47 AAGGRGRETGNAQGPR------LALQARAAAPAFPAASRRSVPAPRG----RRLLLPGAV 96
Query: 64 LLQALMELAPASAPA---RDAARALVNLAADPGLHETLLAADPGLPARLMGRALDPQWPW 120
A+ + P S P R AARA A GL P R G ++D P
Sbjct: 97 AACAVSDGQPLSPPLRQPRPAARAPEGALASCGLRAGWAGWPPQAAWRAWGASVDAAAP- 155
Query: 121 AEEAAAALANL------SREPAPCAALMAALAAAEPA 151
EAA+A A L +R P P M A A+ A
Sbjct: 156 PSEAASAEARLPERSGPARRPGPECVPMKAPGLAQAA 192
>gi|239751641 PREDICTED: hypothetical protein XP_002347943 [Homo
sapiens]
Length = 369
Score = 30.8 bits (68), Expect = 2.2
Identities = 37/111 (33%), Positives = 51/111 (45%), Gaps = 23/111 (20%)
Query: 34 RADLQAAAVRH-VLALTGCGPGRALLAGQAALLQALMELAPASAPARDAARALVNLAADP 92
+ +L+A +R +L LTG GP +A LQAL+ AP + R A AL +L+
Sbjct: 119 KGELKALKLRFGLLPLTG-GP-------RALPLQALLLEAPWTGDPRPGAEALSSLS--- 167
Query: 93 GLHETLL---AADPGLPARLMGRALDPQWPWAEEAAAALANLSREPAPCAA 140
G H LL + D G+P G L P+W LA R P A+
Sbjct: 168 GSHSCLLRPRSLDAGIPG-CRGCLLAPRW-------TGLATSPRSPQESAS 210
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.135 0.406
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,108,235
Number of Sequences: 37866
Number of extensions: 844473
Number of successful extensions: 3567
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 54
Number of HSP's that attempted gapping in prelim test: 3469
Number of HSP's gapped (non-prelim): 126
length of query: 390
length of database: 18,247,518
effective HSP length: 104
effective length of query: 286
effective length of database: 14,309,454
effective search space: 4092503844
effective search space used: 4092503844
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.