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Search of human proteins with 4505091
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4505091 T-lymphocyte maturation-associated protein isoform a
[Homo sapiens]
(153 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4505091 T-lymphocyte maturation-associated protein isoform a ... 310 4e-85
gi|12408661 T-lymphocyte maturation-associated protein isoform b... 205 1e-53
gi|12408663 T-lymphocyte maturation-associated protein isoform c... 160 4e-40
gi|13162283 mal, T-cell differentiation protein-like [Homo sapiens] 122 2e-28
gi|239741714 PREDICTED: hypothetical protein XP_002342305 [Homo ... 106 7e-24
gi|16418397 MAL2 proteolipid protein [Homo sapiens] 104 3e-23
gi|169164947 PREDICTED: similar to mal, T-cell differentiation p... 87 6e-18
gi|169164253 PREDICTED: similar to mal, T-cell differentiation p... 87 6e-18
gi|169163277 PREDICTED: similar to mal, T-cell differentiation p... 87 6e-18
gi|32130536 CKLF-like MARVEL transmembrane domain containing 8 [... 78 3e-15
gi|12408665 T-lymphocyte maturation-associated protein isoform d... 71 4e-13
gi|7705755 plasmolipin [Homo sapiens] 58 3e-09
gi|66932929 myeloid-associated differentiation marker [Homo sapi... 47 8e-06
gi|66932927 myeloid-associated differentiation marker [Homo sapi... 47 8e-06
gi|66932925 myeloid-associated differentiation marker [Homo sapi... 47 8e-06
gi|66932923 myeloid-associated differentiation marker [Homo sapi... 47 8e-06
gi|19923903 myeloid-associated differentiation marker [Homo sapi... 47 8e-06
gi|223278370 myeloid-associated differentiation marker-like 2 [H... 42 2e-04
gi|31657096 chemokine-like factor superfamily 4 isoform 2 [Homo ... 42 3e-04
gi|30520333 chemokine-like factor superfamily 4 isoform 1 [Homo ... 42 3e-04
gi|27894385 frizzled 5 precursor [Homo sapiens] 32 0.21
gi|187960069 glutamate receptor, metabotropic 8 isoform b precur... 31 0.36
gi|187960067 glutamate receptor, metabotropic 8 isoform a precur... 31 0.36
gi|58219014 solute carrier family 6, member 17 [Homo sapiens] 28 2.3
gi|52353332 olfactory receptor, family 52, subfamily D, member 1... 27 5.2
gi|84370252 MARVEL domain containing 2 isoform 1 [Homo sapiens] 27 6.8
gi|21687270 MARVEL domain containing 2 isoform beta [Homo sapiens] 27 6.8
gi|62526033 ATP-binding cassette, sub-family G, member 2 [Homo s... 27 8.9
gi|153252214 solute carrier family 39 (zinc transporter), member... 27 8.9
gi|153252201 solute carrier family 39 (zinc transporter), member... 27 8.9
>gi|4505091 T-lymphocyte maturation-associated protein isoform a
[Homo sapiens]
Length = 153
Score = 310 bits (793), Expect = 4e-85
Identities = 153/153 (100%), Positives = 153/153 (100%)
Query: 1 MAPAAATGGSTLPSGFSVFTTLPDLLFIFEFIFGGLVWILVASSLVPWPLVQGWVMFVSV 60
MAPAAATGGSTLPSGFSVFTTLPDLLFIFEFIFGGLVWILVASSLVPWPLVQGWVMFVSV
Sbjct: 1 MAPAAATGGSTLPSGFSVFTTLPDLLFIFEFIFGGLVWILVASSLVPWPLVQGWVMFVSV 60
Query: 61 FCFVATTTLIILYIIGAHGGETSWVTLDAAYHCTAALFYLSASVLEALATITMQDGFTYR 120
FCFVATTTLIILYIIGAHGGETSWVTLDAAYHCTAALFYLSASVLEALATITMQDGFTYR
Sbjct: 61 FCFVATTTLIILYIIGAHGGETSWVTLDAAYHCTAALFYLSASVLEALATITMQDGFTYR 120
Query: 121 HYHENIAAVVFSYIATLLYVVHAVFSLIRWKSS 153
HYHENIAAVVFSYIATLLYVVHAVFSLIRWKSS
Sbjct: 121 HYHENIAAVVFSYIATLLYVVHAVFSLIRWKSS 153
>gi|12408661 T-lymphocyte maturation-associated protein isoform b
[Homo sapiens]
Length = 111
Score = 205 bits (522), Expect = 1e-53
Identities = 111/153 (72%), Positives = 111/153 (72%), Gaps = 42/153 (27%)
Query: 1 MAPAAATGGSTLPSGFSVFTTLPDLLFIFEFIFGGLVWILVASSLVPWPLVQGWVMFVSV 60
MAPAAATGGSTLPSGFSVFTTLPDLLFIFEFIFGGLVWILVASSLVPWPLVQGWVMFVSV
Sbjct: 1 MAPAAATGGSTLPSGFSVFTTLPDLLFIFEFIFGGLVWILVASSLVPWPLVQGWVMFVSV 60
Query: 61 FCFVATTTLIILYIIGAHGGETSWVTLDAAYHCTAALFYLSASVLEALATITMQDGFTYR 120
FCFVATTTLIILYIIGAHGGETSWVTL
Sbjct: 61 FCFVATTTLIILYIIGAHGGETSWVTL--------------------------------- 87
Query: 121 HYHENIAAVVFSYIATLLYVVHAVFSLIRWKSS 153
VFSYIATLLYVVHAVFSLIRWKSS
Sbjct: 88 ---------VFSYIATLLYVVHAVFSLIRWKSS 111
>gi|12408663 T-lymphocyte maturation-associated protein isoform c
[Homo sapiens]
Length = 97
Score = 160 bits (405), Expect = 4e-40
Identities = 95/153 (62%), Positives = 95/153 (62%), Gaps = 56/153 (36%)
Query: 1 MAPAAATGGSTLPSGFSVFTTLPDLLFIFEFIFGGLVWILVASSLVPWPLVQGWVMFVSV 60
MAPAAATGGSTLPSGFSVFTTLPDLL FIF
Sbjct: 1 MAPAAATGGSTLPSGFSVFTTLPDLL----FIF--------------------------- 29
Query: 61 FCFVATTTLIILYIIGAHGGETSWVTLDAAYHCTAALFYLSASVLEALATITMQDGFTYR 120
DAAYHCTAALFYLSASVLEALATITMQDGFTYR
Sbjct: 30 -------------------------EFDAAYHCTAALFYLSASVLEALATITMQDGFTYR 64
Query: 121 HYHENIAAVVFSYIATLLYVVHAVFSLIRWKSS 153
HYHENIAAVVFSYIATLLYVVHAVFSLIRWKSS
Sbjct: 65 HYHENIAAVVFSYIATLLYVVHAVFSLIRWKSS 97
>gi|13162283 mal, T-cell differentiation protein-like [Homo sapiens]
Length = 153
Score = 122 bits (305), Expect = 2e-28
Identities = 60/141 (42%), Positives = 91/141 (64%)
Query: 3 PAAATGGSTLPSGFSVFTTLPDLLFIFEFIFGGLVWILVASSLVPWPLVQGWVMFVSVFC 62
PA + S +PSG ++F T+P F+ E IFG LVW +VA++ + +PL+QGWVM+VS+
Sbjct: 7 PATSYAPSDVPSGVALFLTIPFAFFLPELIFGFLVWTMVAATHIVYPLLQGWVMYVSLTS 66
Query: 63 FVATTTLIILYIIGAHGGETSWVTLDAAYHCTAALFYLSASVLEALATITMQDGFTYRHY 122
F+ + ++ Y+ G + SW LD+ YH T + Y+SA+VL+ ATI + R Y
Sbjct: 67 FLISLMFLLSYLFGFYKRFESWRVLDSLYHGTTGILYMSAAVLQVHATIVSEKLLDPRIY 126
Query: 123 HENIAAVVFSYIATLLYVVHA 143
+ N AA F++IATLLY++HA
Sbjct: 127 YINSAASFFAFIATLLYILHA 147
>gi|239741714 PREDICTED: hypothetical protein XP_002342305 [Homo
sapiens]
Length = 231
Score = 106 bits (265), Expect = 7e-24
Identities = 58/142 (40%), Positives = 85/142 (59%)
Query: 2 APAAATGGSTLPSGFSVFTTLPDLLFIFEFIFGGLVWILVASSLVPWPLVQGWVMFVSVF 61
APAAA G+ L + S P IFG LVW +VA++ + +PL+QGWVM+VS+
Sbjct: 84 APAAAMSGAGLAAVVSCLRPQPGEEPQTHEIFGFLVWTMVAATHIVYPLLQGWVMYVSLT 143
Query: 62 CFVATTTLIILYIIGAHGGETSWVTLDAAYHCTAALFYLSASVLEALATITMQDGFTYRH 121
F+ + ++ Y+ G + SW LD+ YH T + Y+SA+VL+ ATI + R
Sbjct: 144 SFLISLMFLLSYLFGFYKRFESWRVLDSLYHGTTGILYMSAAVLQVHATIVSEKLLDPRI 203
Query: 122 YHENIAAVVFSYIATLLYVVHA 143
Y+ N AA F++IATLLY++HA
Sbjct: 204 YYINSAASFFAFIATLLYILHA 225
>gi|16418397 MAL2 proteolipid protein [Homo sapiens]
Length = 176
Score = 104 bits (259), Expect = 3e-23
Identities = 61/152 (40%), Positives = 83/152 (54%), Gaps = 11/152 (7%)
Query: 11 TLPSGFSVFTTLPDLLFIFEFIFGGLVWILVASSLVPWPLVQGWVMFVSVFCFVATTTLI 70
TLP+G + T E +FGGLVWILVASS VP PL+QGWVMFVSV F + +
Sbjct: 24 TLPAGPDILRTYSGAFVCLEILFGGLVWILVASSNVPLPLLQGWVMFVSVTAFFFSLLFL 83
Query: 71 ILYIIGAHGG-ETSWVTLDAAYHCTAALFYLSASVLEALA----------TITMQDGFTY 119
+++ G + +W LD AYH T +FY A +LEA A TIT Q +
Sbjct: 84 GMFLSGMVAQIDANWNFLDFAYHFTVFVFYFGAFLLEAAATSLHDLHCNTTITGQPLLSD 143
Query: 120 RHYHENIAAVVFSYIATLLYVVHAVFSLIRWK 151
Y+ N+AA +F+++ T Y +L RW+
Sbjct: 144 NQYNINVAASIFAFMTTACYGCSLGLALRRWR 175
>gi|169164947 PREDICTED: similar to mal, T-cell differentiation
protein-like [Homo sapiens]
Length = 130
Score = 87.0 bits (214), Expect = 6e-18
Identities = 46/112 (41%), Positives = 72/112 (64%), Gaps = 5/112 (4%)
Query: 32 IFGGLVWILVASSLVPWPLVQGWVMFVSVFCFVATTTLIILYIIGAHGGETSWVTLDAAY 91
IFG VWILVA++ V PL+QGWVM+VS+ F+ + +++++ + G SW LD+ Y
Sbjct: 18 IFGFWVWILVATTQVANPLLQGWVMYVSLTLFL----ISLVFLLSSLFGFESWRVLDSLY 73
Query: 92 HCTAALFYLSASVLEALATITMQDGFTYRHYHENIAAVVFSYIATLLYVVHA 143
H T + Y+SA+VL+ I M + R+Y N AA+ F+++ LLY++HA
Sbjct: 74 HGTTGILYMSAAVLQVHVMI-MSEAQDLRNYCINTAALFFAFVTMLLYILHA 124
>gi|169164253 PREDICTED: similar to mal, T-cell differentiation
protein-like [Homo sapiens]
Length = 130
Score = 87.0 bits (214), Expect = 6e-18
Identities = 46/112 (41%), Positives = 72/112 (64%), Gaps = 5/112 (4%)
Query: 32 IFGGLVWILVASSLVPWPLVQGWVMFVSVFCFVATTTLIILYIIGAHGGETSWVTLDAAY 91
IFG VWILVA++ V PL+QGWVM+VS+ F+ + +++++ + G SW LD+ Y
Sbjct: 18 IFGFWVWILVATTQVANPLLQGWVMYVSLTLFL----ISLVFLLSSLFGFESWRVLDSLY 73
Query: 92 HCTAALFYLSASVLEALATITMQDGFTYRHYHENIAAVVFSYIATLLYVVHA 143
H T + Y+SA+VL+ I M + R+Y N AA+ F+++ LLY++HA
Sbjct: 74 HGTTGILYMSAAVLQVHVMI-MSEAQDLRNYCINTAALFFAFVTMLLYILHA 124
>gi|169163277 PREDICTED: similar to mal, T-cell differentiation
protein-like [Homo sapiens]
Length = 130
Score = 87.0 bits (214), Expect = 6e-18
Identities = 46/112 (41%), Positives = 72/112 (64%), Gaps = 5/112 (4%)
Query: 32 IFGGLVWILVASSLVPWPLVQGWVMFVSVFCFVATTTLIILYIIGAHGGETSWVTLDAAY 91
IFG VWILVA++ V PL+QGWVM+VS+ F+ + +++++ + G SW LD+ Y
Sbjct: 18 IFGFWVWILVATTQVANPLLQGWVMYVSLTLFL----ISLVFLLSSLFGFESWRVLDSLY 73
Query: 92 HCTAALFYLSASVLEALATITMQDGFTYRHYHENIAAVVFSYIATLLYVVHA 143
H T + Y+SA+VL+ I M + R+Y N AA+ F+++ LLY++HA
Sbjct: 74 HGTTGILYMSAAVLQVHVMI-MSEAQDLRNYCINTAALFFAFVTMLLYILHA 124
>gi|32130536 CKLF-like MARVEL transmembrane domain containing 8
[Homo sapiens]
Length = 173
Score = 77.8 bits (190), Expect = 3e-15
Identities = 45/149 (30%), Positives = 76/149 (51%), Gaps = 5/149 (3%)
Query: 6 ATGGSTLPSGFSVFTTLPDLLFIFEFIFGGLVWILVASSLVPWPLVQGWVMFVSVFCFVA 65
+T S+ TLP L + E + G LVW L+A + GWVMFV+VF +V
Sbjct: 24 STSSSSFAYDREFLRTLPGFLIVAEIVLGLLVWTLIAGTEYFRVPAFGWVMFVAVFYWVL 83
Query: 66 TTTLIILYIIGAHG--GETSWVTLDAAYHCTAALFYLSASVLEALATITMQDGFTYRHYH 123
T +I+YI + + W T+ ++ +A + YLSA+V++A + +D + +
Sbjct: 84 TVFFLIIYITMTYTRIPQVPWTTVGLCFNGSAFVLYLSAAVVDASSVSPERDSHNFNSW- 142
Query: 124 ENIAAVVFSYIATLLYVVHAVFSLIRWKS 152
A+ F+++ T+ Y + FS I W+S
Sbjct: 143 --AASSFFAFLVTICYAGNTYFSFIAWRS 169
>gi|12408665 T-lymphocyte maturation-associated protein isoform d
[Homo sapiens]
Length = 55
Score = 70.9 bits (172), Expect = 4e-13
Identities = 36/52 (69%), Positives = 40/52 (76%), Gaps = 4/52 (7%)
Query: 1 MAPAAATGGSTLPSGFSVFTTLPDLLFIFEFIFGGLVWIL----VASSLVPW 48
MAPAAATGGSTLPSGFSVFTTLPDLLFIFEF+F + +L SL+ W
Sbjct: 1 MAPAAATGGSTLPSGFSVFTTLPDLLFIFEFVFSYIATLLYVVHAVFSLIRW 52
Score = 50.8 bits (120), Expect = 4e-07
Identities = 24/24 (100%), Positives = 24/24 (100%)
Query: 130 VFSYIATLLYVVHAVFSLIRWKSS 153
VFSYIATLLYVVHAVFSLIRWKSS
Sbjct: 32 VFSYIATLLYVVHAVFSLIRWKSS 55
>gi|7705755 plasmolipin [Homo sapiens]
Length = 182
Score = 58.2 bits (139), Expect = 3e-09
Identities = 38/129 (29%), Positives = 62/129 (48%), Gaps = 5/129 (3%)
Query: 26 LFIFEFIFGGLVWILVASSLVPWPLVQGWVMFVSVFCFVATTTLIILYIIGAHGG--ETS 83
L + + + G LVW L+A + GWVMFV+VF ++ T L LY+ H
Sbjct: 40 LMLLQLVLGLLVWALIADTPYHLYPAYGWVMFVAVFLWLVTIVLFNLYLFQLHMKLYMVP 99
Query: 84 WVTLDAAYHCTAALFYLSASV-LEALATITMQDGFTYRHYHENIAAVVFSYIATLLYVVH 142
W + ++ +A + Y++A + A +T G R Y++ AA F+ + + Y V
Sbjct: 100 WPLVLMIFNISATVLYITAFIACSAAVDLTSLRG--TRPYNQRAAASFFACLVMIAYGVS 157
Query: 143 AVFSLIRWK 151
A FS W+
Sbjct: 158 AFFSYQAWR 166
>gi|66932929 myeloid-associated differentiation marker [Homo
sapiens]
Length = 322
Score = 46.6 bits (109), Expect = 8e-06
Identities = 38/126 (30%), Positives = 55/126 (43%), Gaps = 3/126 (2%)
Query: 25 LLFIFEFIFGGLVWILVASSLVPWPLVQGWVMFVSVFCFVATTTLIILYIIGAHGG-ETS 83
LL + + + + + LVAS + W MF FCF T ++I+ + G S
Sbjct: 38 LLRLLQLVSTCVAFSLVASVGAWTGSMGNWSMFTWCFCFSVTLIILIVELCGLQARFPLS 97
Query: 84 WVTLDAAYHCTAALFYLSASVLEALATITMQDGFTYRHYHENIAAVVFSYIATLLYVVHA 143
W + C AALF LSAS++ T +Q R IAA FS IA + Y
Sbjct: 98 WRNFPITFACYAALFCLSASII--YPTTYVQFLSHGRSRDHAIAATFFSCIACVAYATEV 155
Query: 144 VFSLIR 149
++ R
Sbjct: 156 AWTRAR 161
>gi|66932927 myeloid-associated differentiation marker [Homo
sapiens]
Length = 322
Score = 46.6 bits (109), Expect = 8e-06
Identities = 38/126 (30%), Positives = 55/126 (43%), Gaps = 3/126 (2%)
Query: 25 LLFIFEFIFGGLVWILVASSLVPWPLVQGWVMFVSVFCFVATTTLIILYIIGAHGG-ETS 83
LL + + + + + LVAS + W MF FCF T ++I+ + G S
Sbjct: 38 LLRLLQLVSTCVAFSLVASVGAWTGSMGNWSMFTWCFCFSVTLIILIVELCGLQARFPLS 97
Query: 84 WVTLDAAYHCTAALFYLSASVLEALATITMQDGFTYRHYHENIAAVVFSYIATLLYVVHA 143
W + C AALF LSAS++ T +Q R IAA FS IA + Y
Sbjct: 98 WRNFPITFACYAALFCLSASII--YPTTYVQFLSHGRSRDHAIAATFFSCIACVAYATEV 155
Query: 144 VFSLIR 149
++ R
Sbjct: 156 AWTRAR 161
>gi|66932925 myeloid-associated differentiation marker [Homo
sapiens]
Length = 322
Score = 46.6 bits (109), Expect = 8e-06
Identities = 38/126 (30%), Positives = 55/126 (43%), Gaps = 3/126 (2%)
Query: 25 LLFIFEFIFGGLVWILVASSLVPWPLVQGWVMFVSVFCFVATTTLIILYIIGAHGG-ETS 83
LL + + + + + LVAS + W MF FCF T ++I+ + G S
Sbjct: 38 LLRLLQLVSTCVAFSLVASVGAWTGSMGNWSMFTWCFCFSVTLIILIVELCGLQARFPLS 97
Query: 84 WVTLDAAYHCTAALFYLSASVLEALATITMQDGFTYRHYHENIAAVVFSYIATLLYVVHA 143
W + C AALF LSAS++ T +Q R IAA FS IA + Y
Sbjct: 98 WRNFPITFACYAALFCLSASII--YPTTYVQFLSHGRSRDHAIAATFFSCIACVAYATEV 155
Query: 144 VFSLIR 149
++ R
Sbjct: 156 AWTRAR 161
>gi|66932923 myeloid-associated differentiation marker [Homo
sapiens]
Length = 322
Score = 46.6 bits (109), Expect = 8e-06
Identities = 38/126 (30%), Positives = 55/126 (43%), Gaps = 3/126 (2%)
Query: 25 LLFIFEFIFGGLVWILVASSLVPWPLVQGWVMFVSVFCFVATTTLIILYIIGAHGG-ETS 83
LL + + + + + LVAS + W MF FCF T ++I+ + G S
Sbjct: 38 LLRLLQLVSTCVAFSLVASVGAWTGSMGNWSMFTWCFCFSVTLIILIVELCGLQARFPLS 97
Query: 84 WVTLDAAYHCTAALFYLSASVLEALATITMQDGFTYRHYHENIAAVVFSYIATLLYVVHA 143
W + C AALF LSAS++ T +Q R IAA FS IA + Y
Sbjct: 98 WRNFPITFACYAALFCLSASII--YPTTYVQFLSHGRSRDHAIAATFFSCIACVAYATEV 155
Query: 144 VFSLIR 149
++ R
Sbjct: 156 AWTRAR 161
>gi|19923903 myeloid-associated differentiation marker [Homo
sapiens]
Length = 322
Score = 46.6 bits (109), Expect = 8e-06
Identities = 38/126 (30%), Positives = 55/126 (43%), Gaps = 3/126 (2%)
Query: 25 LLFIFEFIFGGLVWILVASSLVPWPLVQGWVMFVSVFCFVATTTLIILYIIGAHGG-ETS 83
LL + + + + + LVAS + W MF FCF T ++I+ + G S
Sbjct: 38 LLRLLQLVSTCVAFSLVASVGAWTGSMGNWSMFTWCFCFSVTLIILIVELCGLQARFPLS 97
Query: 84 WVTLDAAYHCTAALFYLSASVLEALATITMQDGFTYRHYHENIAAVVFSYIATLLYVVHA 143
W + C AALF LSAS++ T +Q R IAA FS IA + Y
Sbjct: 98 WRNFPITFACYAALFCLSASII--YPTTYVQFLSHGRSRDHAIAATFFSCIACVAYATEV 155
Query: 144 VFSLIR 149
++ R
Sbjct: 156 AWTRAR 161
>gi|223278370 myeloid-associated differentiation marker-like 2 [Homo
sapiens]
Length = 307
Score = 42.0 bits (97), Expect = 2e-04
Identities = 36/132 (27%), Positives = 56/132 (42%), Gaps = 18/132 (13%)
Query: 27 FIFEFIFGGLVWILVASSLVPWPLVQGWVMFVSVFCFVATTTLIILYIIGAHGG---ETS 83
F+ IFG LV S + W + V CF+AT ++ L ++G GG
Sbjct: 173 FVACIIFGALVH----DSRYGRYVATQWCVAVYSLCFLATVAVVALSVMGHTGGLGCPFD 228
Query: 84 WVTLDAAYHCTAALFYLSASVLEALATITMQDGFTYR---------HYHENIAAVVFSYI 134
W+ + Y A L YLSA+V+ + + G R + + +F+Y+
Sbjct: 229 WLVV--VYTFLAVLLYLSAAVIWPVFCFDPKYGEPKRPPNCARGSCPWDSQLVVAIFTYV 286
Query: 135 ATLLYVVHAVFS 146
LLYVV +S
Sbjct: 287 NLLLYVVDLAYS 298
>gi|31657096 chemokine-like factor superfamily 4 isoform 2 [Homo
sapiens]
Length = 208
Score = 41.6 bits (96), Expect = 3e-04
Identities = 28/99 (28%), Positives = 48/99 (48%), Gaps = 11/99 (11%)
Query: 57 FVSVFCFVATTTLIILYIIGAHGG--ETSWVTLDAAYHCTAALFYLSASVLEALATITMQ 114
FVS FV T L+I++ + H + +W D +A + AS++ LA + +
Sbjct: 89 FVSCSAFVVTGVLLIMFSLNLHMRIPQINWNLTDLVNTGLSAFLFFIASIV--LAALNHR 146
Query: 115 DGFTYRHYHENIAAVVFSYIATLLYVVHAVFSLIRWKSS 153
G IAAV+F ++AT Y V+ ++ +W+ S
Sbjct: 147 AG-------AEIAAVIFGFLATAAYAVNTFLAVQKWRVS 178
>gi|30520333 chemokine-like factor superfamily 4 isoform 1 [Homo
sapiens]
Length = 234
Score = 41.6 bits (96), Expect = 3e-04
Identities = 28/99 (28%), Positives = 48/99 (48%), Gaps = 11/99 (11%)
Query: 57 FVSVFCFVATTTLIILYIIGAHGG--ETSWVTLDAAYHCTAALFYLSASVLEALATITMQ 114
FVS FV T L+I++ + H + +W D +A + AS++ LA + +
Sbjct: 89 FVSCSAFVVTGVLLIMFSLNLHMRIPQINWNLTDLVNTGLSAFLFFIASIV--LAALNHR 146
Query: 115 DGFTYRHYHENIAAVVFSYIATLLYVVHAVFSLIRWKSS 153
G IAAV+F ++AT Y V+ ++ +W+ S
Sbjct: 147 AG-------AEIAAVIFGFLATAAYAVNTFLAVQKWRVS 178
>gi|27894385 frizzled 5 precursor [Homo sapiens]
Length = 585
Score = 32.0 bits (71), Expect = 0.21
Identities = 24/100 (24%), Positives = 38/100 (38%), Gaps = 7/100 (7%)
Query: 54 WVMFVSVFCFVATTTLIILYIIGAHG---GETSWVTLDAAYHCTAALFYLSASVLEALAT 110
W+ SV CF++T+T + ++I E + L A Y C + F + V A
Sbjct: 238 WIGLWSVLCFISTSTTVATFLIDMERFRYPERPIIFLSACYLCVSLGFLVRLVVGHASVA 297
Query: 111 ITMQDGFTYRHYHENIAAVVFSYIATLLYVVHAVFSLIRW 150
+ + + H H I LL + S I W
Sbjct: 298 CSRE----HNHIHYETTGPALCTIVFLLVYFFGMASSIWW 333
>gi|187960069 glutamate receptor, metabotropic 8 isoform b precursor
[Homo sapiens]
Length = 908
Score = 31.2 bits (69), Expect = 0.36
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 10/64 (15%)
Query: 47 PWPLVQGWVMFVSVFCFVATTTLIILY-------IIGAHGGETSWVTLDAAYHCTAALFY 99
PW +V +FV++ +ATT +I+ + I+ A G E S+V L + C + F
Sbjct: 582 PWAVVP---VFVAILGIIATTFVIVTFVRYNDTPIVRASGRELSYVLLTGIFLCYSITFL 638
Query: 100 LSAS 103
+ A+
Sbjct: 639 MIAA 642
>gi|187960067 glutamate receptor, metabotropic 8 isoform a precursor
[Homo sapiens]
Length = 908
Score = 31.2 bits (69), Expect = 0.36
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 10/64 (15%)
Query: 47 PWPLVQGWVMFVSVFCFVATTTLIILY-------IIGAHGGETSWVTLDAAYHCTAALFY 99
PW +V +FV++ +ATT +I+ + I+ A G E S+V L + C + F
Sbjct: 582 PWAVVP---VFVAILGIIATTFVIVTFVRYNDTPIVRASGRELSYVLLTGIFLCYSITFL 638
Query: 100 LSAS 103
+ A+
Sbjct: 639 MIAA 642
>gi|58219014 solute carrier family 6, member 17 [Homo sapiens]
Length = 727
Score = 28.5 bits (62), Expect = 2.3
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 6/71 (8%)
Query: 57 FVSVFCFVATTTLIILYIIGAHGGETSWVTLDAA----YHCTAALFYLSASVLEALATIT 112
FVS C TT I+ + G ++W+ +AA Y A+ L ++ +AT+
Sbjct: 574 FVSPLCMAVLTTASIIQLGVTPPGYSAWIKEEAAERYLYFPNWAMALLITLIV--VATLP 631
Query: 113 MQDGFTYRHYH 123
+ F RH+H
Sbjct: 632 IPVVFVLRHFH 642
>gi|52353332 olfactory receptor, family 52, subfamily D, member 1
[Homo sapiens]
Length = 318
Score = 27.3 bits (59), Expect = 5.2
Identities = 15/45 (33%), Positives = 25/45 (55%)
Query: 65 ATTTLIILYIIGAHGGETSWVTLDAAYHCTAALFYLSASVLEALA 109
+TT +L I+ H GE S+ A C +++ L +S+L A+A
Sbjct: 78 STTVPKMLAILWLHAGEISFGGCLAQMFCVHSIYALESSILLAMA 122
>gi|84370252 MARVEL domain containing 2 isoform 1 [Homo sapiens]
Length = 558
Score = 26.9 bits (58), Expect = 6.8
Identities = 26/114 (22%), Positives = 46/114 (40%), Gaps = 20/114 (17%)
Query: 57 FVSVFCFVATTTLIILYIIGAHGG------ETSWVTLDAAYHCTAALFYLSASVLEALAT 110
FV V +A T II+ ++G +++W L + ALF L +
Sbjct: 255 FVLVVAGLAWITTIIILVLGMSMYYRTILLDSNWWPL-TEFGINVALFILYMAAAIVYVN 313
Query: 111 ITMQDGFTY-------------RHYHENIAAVVFSYIATLLYVVHAVFSLIRWK 151
T + G Y R IAA++F ++ ++Y++ A+ L W+
Sbjct: 314 DTNRGGLCYYPLFNTPVNAVFCRVEGGQIAAMIFLFVTMIVYLISALVCLKLWR 367
>gi|21687270 MARVEL domain containing 2 isoform beta [Homo sapiens]
Length = 457
Score = 26.9 bits (58), Expect = 6.8
Identities = 26/114 (22%), Positives = 46/114 (40%), Gaps = 20/114 (17%)
Query: 57 FVSVFCFVATTTLIILYIIGAHGG------ETSWVTLDAAYHCTAALFYLSASVLEALAT 110
FV V +A T II+ ++G +++W L + ALF L +
Sbjct: 255 FVLVVAGLAWITTIIILVLGMSMYYRTILLDSNWWPL-TEFGINVALFILYMAAAIVYVN 313
Query: 111 ITMQDGFTY-------------RHYHENIAAVVFSYIATLLYVVHAVFSLIRWK 151
T + G Y R IAA++F ++ ++Y++ A+ L W+
Sbjct: 314 DTNRGGLCYYPLFNTPVNAVFCRVEGGQIAAMIFLFVTMIVYLISALVCLKLWR 367
>gi|62526033 ATP-binding cassette, sub-family G, member 2 [Homo
sapiens]
Length = 655
Score = 26.6 bits (57), Expect = 8.9
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 9/60 (15%)
Query: 1 MAPAAATGGSTLPSGFSVFTTLPDLLFIFEFIFGGLVWILVASSLVPWPLVQGWVMFVSV 60
MA A A G S + SV T L + F+F IF GL ++ +++ W W+ + S+
Sbjct: 523 MALAIAAGQSVV----SVATLLMTICFVFMMIFSGL--LVNLTTIASW---LSWLQYFSI 573
>gi|153252214 solute carrier family 39 (zinc transporter), member 6
isoform 2 [Homo sapiens]
Length = 433
Score = 26.6 bits (57), Expect = 8.9
Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Query: 85 VTLDAAYHCTAALFYLSASVLEALATITMQDGFTYRHYHENIAAVVFSYIATLLYVVHAV 144
V L A A+ Y + S + LA + M G HY EN++ +F+ A L V V
Sbjct: 371 VLLKAGMTVKQAVLYNALSAM--LAYLGMATGIFIGHYAENVSMWIFALTAGLFMYVALV 428
>gi|153252201 solute carrier family 39 (zinc transporter), member 6
isoform 1 [Homo sapiens]
Length = 755
Score = 26.6 bits (57), Expect = 8.9
Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Query: 85 VTLDAAYHCTAALFYLSASVLEALATITMQDGFTYRHYHENIAAVVFSYIATLLYVVHAV 144
V L A A+ Y + S + LA + M G HY EN++ +F+ A L V V
Sbjct: 646 VLLKAGMTVKQAVLYNALSAM--LAYLGMATGIFIGHYAENVSMWIFALTAGLFMYVALV 703
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.330 0.139 0.446
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,199,057
Number of Sequences: 37866
Number of extensions: 186950
Number of successful extensions: 668
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 630
Number of HSP's gapped (non-prelim): 36
length of query: 153
length of database: 18,247,518
effective HSP length: 93
effective length of query: 60
effective length of database: 14,725,980
effective search space: 883558800
effective search space used: 883558800
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.