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Search of human proteins with 4504809
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4504809 jun B proto-oncogene [Homo sapiens]
(347 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4504809 jun B proto-oncogene [Homo sapiens] 707 0.0
gi|4758616 jun oncogene [Homo sapiens] 251 7e-67
gi|102469037 jun D proto-oncogene [Homo sapiens] 238 6e-63
gi|194239643 activating transcription factor 7 isoform 3 [Homo s... 59 8e-09
gi|5802980 activating transcription factor 7 isoform 2 [Homo sap... 59 8e-09
gi|194239640 activating transcription factor 7 isoform 1 [Homo s... 59 8e-09
gi|166999613 FBJ murine osteosarcoma viral oncogene homolog B is... 55 1e-07
gi|22538422 activating transcription factor 2 [Homo sapiens] 54 3e-07
gi|71274111 v-maf musculoaponeurotic fibrosarcoma oncogene homol... 52 1e-06
gi|59938776 cAMP responsive element binding protein 5 isoform de... 51 2e-06
gi|59938774 cAMP responsive element binding protein 5 isoform be... 51 2e-06
gi|59938772 cAMP responsive element binding protein 5 isoform ga... 51 2e-06
gi|59938770 cAMP responsive element binding protein 5 isoform al... 51 2e-06
gi|4885243 FOS-like antigen 1 [Homo sapiens] 50 3e-06
gi|7657387 CCR4-NOT transcription complex, subunit 3 [Homo sapiens] 50 3e-06
gi|89257348 homeo box HB9 [Homo sapiens] 50 4e-06
gi|25777671 protein phosphatase 1, regulatory subunit 10 [Homo s... 48 1e-05
gi|24432032 zinc finger protein 503 [Homo sapiens] 48 1e-05
gi|40288197 GATA binding protein 6 [Homo sapiens] 47 3e-05
gi|109255251 loricrin [Homo sapiens] 46 6e-05
gi|55956899 keratin 9 [Homo sapiens] 45 7e-05
gi|153792074 proline rich 12 [Homo sapiens] 45 7e-05
gi|45827690 BTB and CNC homology 1 transcription factor isoform ... 45 1e-04
gi|4502353 BTB and CNC homology 1 transcription factor isoform a... 45 1e-04
gi|4885245 FOS-like antigen 2 [Homo sapiens] 44 2e-04
gi|55956910 meningioma 1 [Homo sapiens] 44 2e-04
gi|33188461 GATA binding protein 4 [Homo sapiens] 44 2e-04
gi|28872800 CCAAT/enhancer binding protein epsilon [Homo sapiens] 44 2e-04
gi|28872794 CCAAT/enhancer binding protein alpha [Homo sapiens] 44 3e-04
gi|8924246 basic leucine zipper transcription factor, ATF-like 3... 44 3e-04
>gi|4504809 jun B proto-oncogene [Homo sapiens]
Length = 347
Score = 707 bits (1826), Expect = 0.0
Identities = 347/347 (100%), Positives = 347/347 (100%)
Query: 1 MCTKMEQPFYHDDSYTATGYGRAPGGLSLHDYKLLKPSLAVNLADPYRSLKAPGARGPGP 60
MCTKMEQPFYHDDSYTATGYGRAPGGLSLHDYKLLKPSLAVNLADPYRSLKAPGARGPGP
Sbjct: 1 MCTKMEQPFYHDDSYTATGYGRAPGGLSLHDYKLLKPSLAVNLADPYRSLKAPGARGPGP 60
Query: 61 EGGGGGSYFSGQGSDTGASLKLASSELERLIVPNSNGVITTTPTPPGQYFYPRGGGSGGG 120
EGGGGGSYFSGQGSDTGASLKLASSELERLIVPNSNGVITTTPTPPGQYFYPRGGGSGGG
Sbjct: 61 EGGGGGSYFSGQGSDTGASLKLASSELERLIVPNSNGVITTTPTPPGQYFYPRGGGSGGG 120
Query: 121 AGGAGGGVTEEQEGFADGFVKALDDLHKMNHVTPPNVSLGATGGPPAGPGGVYAGPEPPP 180
AGGAGGGVTEEQEGFADGFVKALDDLHKMNHVTPPNVSLGATGGPPAGPGGVYAGPEPPP
Sbjct: 121 AGGAGGGVTEEQEGFADGFVKALDDLHKMNHVTPPNVSLGATGGPPAGPGGVYAGPEPPP 180
Query: 181 VYTNLSSYSPASASSGGAGAAVGTGSSYPTTTISYLPHAPPFAGGHPAQLGLGRGASTFK 240
VYTNLSSYSPASASSGGAGAAVGTGSSYPTTTISYLPHAPPFAGGHPAQLGLGRGASTFK
Sbjct: 181 VYTNLSSYSPASASSGGAGAAVGTGSSYPTTTISYLPHAPPFAGGHPAQLGLGRGASTFK 240
Query: 241 EEPQTVPEARSRDATPPVSPINMEDQERIKVERKRLRNRLAATKCRKRKLERIARLEDKV 300
EEPQTVPEARSRDATPPVSPINMEDQERIKVERKRLRNRLAATKCRKRKLERIARLEDKV
Sbjct: 241 EEPQTVPEARSRDATPPVSPINMEDQERIKVERKRLRNRLAATKCRKRKLERIARLEDKV 300
Query: 301 KTLKAENAGLSSTAGLLREQVAQLKQKVMTHVSNGCQLLLGVKGHAF 347
KTLKAENAGLSSTAGLLREQVAQLKQKVMTHVSNGCQLLLGVKGHAF
Sbjct: 301 KTLKAENAGLSSTAGLLREQVAQLKQKVMTHVSNGCQLLLGVKGHAF 347
>gi|4758616 jun oncogene [Homo sapiens]
Length = 331
Score = 251 bits (641), Expect = 7e-67
Identities = 173/364 (47%), Positives = 212/364 (58%), Gaps = 64/364 (17%)
Query: 1 MCTKMEQPFYHDDSYTATGYGRAPGGLSLHDYKLLKPSLAVNLADPYRSLKAPGARGPGP 60
M KME FY DD+ A+ G + K+LK S+ +NLADP SLK P R
Sbjct: 1 MTAKMETTFY-DDALNASFLPSESGPYGYSNPKILKQSMTLNLADPVGSLK-PHLRAKNS 58
Query: 61 EGGGGGSYFSGQGSDTGASLKLASSELERLIVPNSNGVITTTPTPPGQYFYPRGGGSGGG 120
+ D G LKLAS ELERLI+ +SNG ITTTPTP Q+ P+
Sbjct: 59 D--------LLTSPDVGL-LKLASPELERLIIQSSNGHITTTPTPT-QFLCPKN------ 102
Query: 121 AGGAGGGVTEEQEGFADGFVKALDDLHKMNHVTPPNVSLGA----------------TGG 164
VT+EQEGFA+GFV+AL +LH N T P+V+ A GG
Sbjct: 103 -------VTDEQEGFAEGFVRALAELHSQN--TLPSVTSAAQPVNGAGMVAPAVASVAGG 153
Query: 165 PPAGPGGVYAG-PEPPPVYTNLSSYSPASASSGGAGAAVGT-GSSYPTTTIS------YL 216
+G GG A PPVY NLS+++P + SSGG + G G ++P +L
Sbjct: 154 --SGSGGFSASLHSEPPVYANLSNFNPGALSSGGGAPSYGAAGLAFPAQPQQQQQPPHHL 211
Query: 217 PHAPPFAGGHPAQLGLGRGASTFKEEPQTVPEARSRDATPPVSPINMEDQERIKVERKRL 276
P P HP L KEEPQTVPE TPP+SPI+ME QERIK ERKR+
Sbjct: 212 PQQMPVQ--HPRLQAL-------KEEPQTVPEMPGE--TPPLSPIDMESQERIKAERKRM 260
Query: 277 RNRLAATKCRKRKLERIARLEDKVKTLKAENAGLSSTAGLLREQVAQLKQKVMTHVSNGC 336
RNR+AA+KCRKRKLERIARLE+KVKTLKA+N+ L+STA +LREQVAQLKQKVM HV++GC
Sbjct: 261 RNRIAASKCRKRKLERIARLEEKVKTLKAQNSELASTANMLREQVAQLKQKVMNHVNSGC 320
Query: 337 QLLL 340
QL+L
Sbjct: 321 QLML 324
>gi|102469037 jun D proto-oncogene [Homo sapiens]
Length = 347
Score = 238 bits (607), Expect = 6e-63
Identities = 161/368 (43%), Positives = 205/368 (55%), Gaps = 62/368 (16%)
Query: 5 MEQPFYHDDSYTATGYGRAPGGLSLHDYKLLKP---------------SLAVNLADPYRS 49
ME PFY D++ + G G + G S L P +L ++L++ +
Sbjct: 1 METPFYGDEALSGLGGGASGSGGSFASPGRLFPGAPPTAAAGSMMKKDALTLSLSEQVAA 60
Query: 50 LKAPGARGPGPEGGGGGSYFSGQGSDTGAS-----LKLASSELERLIVPNSNGVITTTPT 104
P A P G+ + AS LKLAS ELERLI+ SNG++TTTPT
Sbjct: 61 ALKPAAAPPPTPLRADGAPSAAPPDGLLASPDLGLLKLASPELERLII-QSNGLVTTTPT 119
Query: 105 PPGQYFYPRGGGSGGGAGGAGGGVTEEQEGFADGFVKALDDLHKMNHVTPPNVSLGATGG 164
Q+ YP+ S EEQE FA+GFVKAL+DLHK N + + A
Sbjct: 120 S-SQFLYPKVAAS------------EEQE-FAEGFVKALEDLHKQNQLGA-GAAAAAAAA 164
Query: 165 PPAGPGGVYAGPEPP------------PVYTNLSSYSPASASSGGAGAAVGTGS-SYPTT 211
GP G G PP PVY NLSSY+ GGAG A G + ++
Sbjct: 165 AAGGPSGTATGSAPPGELAPAAAAPEAPVYANLSSYA------GGAGGAGGAATVAFAAE 218
Query: 212 TISYLPHAPPFAGGHPAQLGLGRGASTFKEEPQTVPEARSRDATPPVSPINMEDQERIKV 271
+ + P PP A G P L K+EPQTVP+ S +PP+SPI+M+ QERIK
Sbjct: 219 PVPFPPPPPPGALGPPRLAAL-------KDEPQTVPDVPSFGESPPLSPIDMDTQERIKA 271
Query: 272 ERKRLRNRLAATKCRKRKLERIARLEDKVKTLKAENAGLSSTAGLLREQVAQLKQKVMTH 331
ERKRLRNR+AA+KCRKRKLERI+RLE+KVKTLK++N L+STA LLREQVAQLKQKV++H
Sbjct: 272 ERKRLRNRIAASKCRKRKLERISRLEEKVKTLKSQNTELASTASLLREQVAQLKQKVLSH 331
Query: 332 VSNGCQLL 339
V++GCQLL
Sbjct: 332 VNSGCQLL 339
>gi|194239643 activating transcription factor 7 isoform 3 [Homo
sapiens]
Length = 462
Score = 58.5 bits (140), Expect = 8e-09
Identities = 50/181 (27%), Positives = 81/181 (44%), Gaps = 18/181 (9%)
Query: 155 PNVSLGATGGPPAGPGGVYAGPEPPPVYTNLSSYSP----ASASSGGAGAAVGTGSSYPT 210
PN+ G G P G + P P + + S+ +GG G VGT S
Sbjct: 208 PNIP-GIPGPPVNSSGSISPSGHPIPSEAKMRLKATLTHQVSSINGGCGMVVGTAS---- 262
Query: 211 TTISYLPHAPPFAGGHPAQLGLGRGASTFKEEPQTVPEARSRDATPPVSPINMEDQERIK 270
T ++ P HP + +PQ P A+ +T +++ +
Sbjct: 263 TMVTARPEQSQILIQHPD--------APSPAQPQVSP-AQPTPSTGGRRRRTVDEDPDER 313
Query: 271 VERKRLRNRLAATKCRKRKLERIARLEDKVKTLKAENAGLSSTAGLLREQVAQLKQKVMT 330
+R RNR AA++CR+++ ++ LE K + L ++N LS+ LLR +VAQLKQ ++
Sbjct: 314 RQRFLERNRAAASRCRQKRKLWVSSLEKKAEELTSQNIQLSNEVTLLRNEVAQLKQLLLA 373
Query: 331 H 331
H
Sbjct: 374 H 374
>gi|5802980 activating transcription factor 7 isoform 2 [Homo
sapiens]
Length = 483
Score = 58.5 bits (140), Expect = 8e-09
Identities = 50/181 (27%), Positives = 81/181 (44%), Gaps = 18/181 (9%)
Query: 155 PNVSLGATGGPPAGPGGVYAGPEPPPVYTNLSSYSP----ASASSGGAGAAVGTGSSYPT 210
PN+ G G P G + P P + + S+ +GG G VGT S
Sbjct: 229 PNIP-GIPGPPVNSSGSISPSGHPIPSEAKMRLKATLTHQVSSINGGCGMVVGTAS---- 283
Query: 211 TTISYLPHAPPFAGGHPAQLGLGRGASTFKEEPQTVPEARSRDATPPVSPINMEDQERIK 270
T ++ P HP + +PQ P A+ +T +++ +
Sbjct: 284 TMVTARPEQSQILIQHPD--------APSPAQPQVSP-AQPTPSTGGRRRRTVDEDPDER 334
Query: 271 VERKRLRNRLAATKCRKRKLERIARLEDKVKTLKAENAGLSSTAGLLREQVAQLKQKVMT 330
+R RNR AA++CR+++ ++ LE K + L ++N LS+ LLR +VAQLKQ ++
Sbjct: 335 RQRFLERNRAAASRCRQKRKLWVSSLEKKAEELTSQNIQLSNEVTLLRNEVAQLKQLLLA 394
Query: 331 H 331
H
Sbjct: 395 H 395
>gi|194239640 activating transcription factor 7 isoform 1 [Homo
sapiens]
Length = 494
Score = 58.5 bits (140), Expect = 8e-09
Identities = 50/181 (27%), Positives = 81/181 (44%), Gaps = 18/181 (9%)
Query: 155 PNVSLGATGGPPAGPGGVYAGPEPPPVYTNLSSYSP----ASASSGGAGAAVGTGSSYPT 210
PN+ G G P G + P P + + S+ +GG G VGT S
Sbjct: 240 PNIP-GIPGPPVNSSGSISPSGHPIPSEAKMRLKATLTHQVSSINGGCGMVVGTAS---- 294
Query: 211 TTISYLPHAPPFAGGHPAQLGLGRGASTFKEEPQTVPEARSRDATPPVSPINMEDQERIK 270
T ++ P HP + +PQ P A+ +T +++ +
Sbjct: 295 TMVTARPEQSQILIQHPD--------APSPAQPQVSP-AQPTPSTGGRRRRTVDEDPDER 345
Query: 271 VERKRLRNRLAATKCRKRKLERIARLEDKVKTLKAENAGLSSTAGLLREQVAQLKQKVMT 330
+R RNR AA++CR+++ ++ LE K + L ++N LS+ LLR +VAQLKQ ++
Sbjct: 346 RQRFLERNRAAASRCRQKRKLWVSSLEKKAEELTSQNIQLSNEVTLLRNEVAQLKQLLLA 405
Query: 331 H 331
H
Sbjct: 406 H 406
>gi|166999613 FBJ murine osteosarcoma viral oncogene homolog B
isoform 1 [Homo sapiens]
Length = 338
Score = 54.7 bits (130), Expect = 1e-07
Identities = 40/134 (29%), Positives = 64/134 (47%), Gaps = 10/134 (7%)
Query: 205 GSSYPTTTISYLPHAPPFAGGHPAQLGLGRGASTFKEEPQTVPEARSRDATPPVSPINME 264
G+SY T +S G P+ G G P AR+R P + E
Sbjct: 101 GTSYSTPGMSGYSSGGASGSGGPSTSGTTSG-------PGPARPARARPRRPREETLTPE 153
Query: 265 DQERIKVERKRLRNRLAATKCRKRKLERIARLEDKVKTLKAENAGLSSTAGLLREQVAQL 324
++E+ +V R+R N+LAA KCR R+ E RL+ + L+ E A L S L+++ +L
Sbjct: 154 EEEKRRVRRER--NKLAAAKCRNRRRELTDRLQAETDQLEEEKAELESEIAELQKEKERL 211
Query: 325 KQKVMTHVSNGCQL 338
+ ++ H GC++
Sbjct: 212 EFVLVAH-KPGCKI 224
>gi|22538422 activating transcription factor 2 [Homo sapiens]
Length = 505
Score = 53.5 bits (127), Expect = 3e-07
Identities = 39/130 (30%), Positives = 59/130 (45%), Gaps = 19/130 (14%)
Query: 220 PPFAGGHPAQLGLGRGASTFKEE---PQTVPEARSRDATPPVSPINMEDQERIKVERKRL 276
PP G + G G G + E PQ++ + + P SP + Q + R+R
Sbjct: 287 PPVTNGDTVK-GHGSGLVRTQSEESRPQSLQQPATSTTETPASPAHTTPQTQSTSGRRRR 345
Query: 277 ---------------RNRLAATKCRKRKLERIARLEDKVKTLKAENAGLSSTAGLLREQV 321
RNR AA++CR+++ + LE K + L + N L S LLR +V
Sbjct: 346 AANEDPDEKRRKFLERNRAAASRCRQKRKVWVQSLEKKAEDLSSLNGQLQSEVTLLRNEV 405
Query: 322 AQLKQKVMTH 331
AQLKQ ++ H
Sbjct: 406 AQLKQLLLAH 415
>gi|71274111 v-maf musculoaponeurotic fibrosarcoma oncogene homolog
A [Homo sapiens]
Length = 353
Score = 51.6 bits (122), Expect = 1e-06
Identities = 70/288 (24%), Positives = 112/288 (38%), Gaps = 44/288 (15%)
Query: 80 LKLASSELERLIVPNSNGVITTTP-------TPPGQYFYPRGGGSGGGAGGAGGGVTEEQ 132
+K E ER G +++TP P F G+GGG GGAGGG Q
Sbjct: 31 VKKEPPEAERFCHRLPPGSLSSTPLSTPCSSVPSSPSFCAPSPGTGGG-GGAGGGGGSSQ 89
Query: 133 EGFADGFVK-------------ALDDLHKMN----HVTPPNVSLGATGGPPA----GPGG 171
G A G AL+DL+ M+ H+ P ++L A G G
Sbjct: 90 AGGAPGPPSGGPGAVGGTSGKPALEDLYWMSGYQHHLNPEALNLTPEDAVEALIGSGHHG 149
Query: 172 VYAGPEPPPVYTNLSSYSPASASSGGAGAAVGTGSSYPTTTISYLPHAPPFAGGHP---- 227
+ G P ++ + GG +G G + ++ HA H
Sbjct: 150 AHHGAHHPAAAAAYEAFRGPGFAGGGGADDMGAGHHHGAHHAAHHHHAAHHHHHHHHHHG 209
Query: 228 -AQLGLGRGASTFKEEPQTVPEARS---RDATPPVSPINMEDQERIKVERKRLRNRLAAT 283
A G G G EE + + S R+ + + E+ R+K +R+ L+NR A
Sbjct: 210 GAGHGGGAGHHVRLEERFSDDQLVSMSVRELNRQLRGFSKEEVIRLKQKRRTLKNRGYAQ 269
Query: 284 KCRKRKLER-------IARLEDKVKTLKAENAGLSSTAGLLREQVAQL 324
CR +++++ +L+ +V+ LK E L+ L +E+ +L
Sbjct: 270 SCRFKRVQQRHILESEKCQLQSQVEQLKLEVGRLAKERDLYKEKYEKL 317
>gi|59938776 cAMP responsive element binding protein 5 isoform delta
[Homo sapiens]
Length = 369
Score = 50.8 bits (120), Expect = 2e-06
Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 9/99 (9%)
Query: 242 EPQTVPEARSRDATPPVSPINMEDQERIKV------ERKRL---RNRLAATKCRKRKLER 292
+ Q P + T + P R +V ER+R RNR AAT+CR+++
Sbjct: 201 QAQVSPATQQMQPTQTIQPPQPTGGRRRRVVDEDPDERRRKFLERNRAAATRCRQKRKVW 260
Query: 293 IARLEDKVKTLKAENAGLSSTAGLLREQVAQLKQKVMTH 331
+ LE K + L N L + +L+ +VAQLKQ ++TH
Sbjct: 261 VMSLEKKAEELTQTNMQLQNEVSMLKNEVAQLKQLLLTH 299
>gi|59938774 cAMP responsive element binding protein 5 isoform beta
[Homo sapiens]
Length = 501
Score = 50.8 bits (120), Expect = 2e-06
Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 9/99 (9%)
Query: 242 EPQTVPEARSRDATPPVSPINMEDQERIKV------ERKRL---RNRLAATKCRKRKLER 292
+ Q P + T + P R +V ER+R RNR AAT+CR+++
Sbjct: 333 QAQVSPATQQMQPTQTIQPPQPTGGRRRRVVDEDPDERRRKFLERNRAAATRCRQKRKVW 392
Query: 293 IARLEDKVKTLKAENAGLSSTAGLLREQVAQLKQKVMTH 331
+ LE K + L N L + +L+ +VAQLKQ ++TH
Sbjct: 393 VMSLEKKAEELTQTNMQLQNEVSMLKNEVAQLKQLLLTH 431
>gi|59938772 cAMP responsive element binding protein 5 isoform gamma
[Homo sapiens]
Length = 475
Score = 50.8 bits (120), Expect = 2e-06
Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 9/99 (9%)
Query: 242 EPQTVPEARSRDATPPVSPINMEDQERIKV------ERKRL---RNRLAATKCRKRKLER 292
+ Q P + T + P R +V ER+R RNR AAT+CR+++
Sbjct: 307 QAQVSPATQQMQPTQTIQPPQPTGGRRRRVVDEDPDERRRKFLERNRAAATRCRQKRKVW 366
Query: 293 IARLEDKVKTLKAENAGLSSTAGLLREQVAQLKQKVMTH 331
+ LE K + L N L + +L+ +VAQLKQ ++TH
Sbjct: 367 VMSLEKKAEELTQTNMQLQNEVSMLKNEVAQLKQLLLTH 405
>gi|59938770 cAMP responsive element binding protein 5 isoform alpha
[Homo sapiens]
Length = 508
Score = 50.8 bits (120), Expect = 2e-06
Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 9/99 (9%)
Query: 242 EPQTVPEARSRDATPPVSPINMEDQERIKV------ERKRL---RNRLAATKCRKRKLER 292
+ Q P + T + P R +V ER+R RNR AAT+CR+++
Sbjct: 340 QAQVSPATQQMQPTQTIQPPQPTGGRRRRVVDEDPDERRRKFLERNRAAATRCRQKRKVW 399
Query: 293 IARLEDKVKTLKAENAGLSSTAGLLREQVAQLKQKVMTH 331
+ LE K + L N L + +L+ +VAQLKQ ++TH
Sbjct: 400 VMSLEKKAEELTQTNMQLQNEVSMLKNEVAQLKQLLLTH 438
>gi|4885243 FOS-like antigen 1 [Homo sapiens]
Length = 271
Score = 50.1 bits (118), Expect = 3e-06
Identities = 50/179 (27%), Positives = 77/179 (43%), Gaps = 30/179 (16%)
Query: 164 GPPAGPGGVYAGPEPPPVYTNLSSYS----PASASSGGAGAAVGT-------GSSYPTTT 212
GP +G GG Y GP PP + P+ + G+ SSYP
Sbjct: 9 GPSSGNGGGYGGPAQPPAAAQAAQQKFHLVPSINTMSGSQELQWMVQPHFLGPSSYP-RP 67
Query: 213 ISYLPHAPPFAGGHPAQLGLGRGASTFKEEPQTVPEARSRDATPPVSPINMEDQERIKVE 272
++Y ++PP + G+ R P R R P I+ E++ER +V
Sbjct: 68 LTYPQYSPP-----QPRPGVIRALG-------PPPGVRRR----PCEQISPEEEERRRVR 111
Query: 273 RKRLRNRLAATKCRKRKLERIARLEDKVKTLKAENAGLSSTAGLLREQVAQLKQKVMTH 331
R+ RN+LAA KCR R+ E L+ + L+ E +GL L++Q +L+ + H
Sbjct: 112 RE--RNKLAAAKCRNRRKELTDFLQAETDKLEDEKSGLQREIEELQKQKERLELVLEAH 168
>gi|7657387 CCR4-NOT transcription complex, subunit 3 [Homo sapiens]
Length = 753
Score = 50.1 bits (118), Expect = 3e-06
Identities = 41/132 (31%), Positives = 54/132 (40%), Gaps = 7/132 (5%)
Query: 93 PNSNGVITTTPTPPGQYFYPRGGGSGG-GAGGAGGGVTEEQEGFADGFVKALDDLHKMNH 151
P +G TT P PP P GGG GG G GG+ G A G +
Sbjct: 378 PAPSGPSTTQPRPPS--VQPSGGGGGGSGGGGSSSSSNSSAGGGA-GKQNGATSYSSVVA 434
Query: 152 VTPPNVSLGATGGPPAGPG--GVYAGPEPPPVYTNLSSYSPASASSGGAGAAVGTGSSYP 209
+P V+L ++GG A G +GP PP T+ + A +GG G S P
Sbjct: 435 DSPAEVALSSSGGNNASSQALGPPSGPHNPPPSTSKEPSAAAPTGAGGVAPGSGNNSGGP 494
Query: 210 TTTISYLPHAPP 221
+ + LP PP
Sbjct: 495 SLLVP-LPVNPP 505
>gi|89257348 homeo box HB9 [Homo sapiens]
Length = 401
Score = 49.7 bits (117), Expect = 4e-06
Identities = 62/237 (26%), Positives = 87/237 (36%), Gaps = 37/237 (15%)
Query: 52 APGARGPGPEGGGGGSYFSGQGSDTGASLKLASSELERLIVPNSNGVITTTPTPPGQY-- 109
A A G G GGGGG+ GS + AS + ++ +RL +P+PP
Sbjct: 35 AAAASGTGGGGGGGGASGGTSGSCSPASSEPPAAPADRL--------RAESPSPPRLLAA 86
Query: 110 ---FYPRGG--GSGGGAGGAGGGVTEEQEGFADGFVKALDDLHKMNHVTPPNVSLGATGG 164
P+ G G+GGG GG GGG G A + A GG
Sbjct: 87 HCALLPKPGFLGAGGGGGGTGGGHGGPHHHAHPGAAAA----------AAAAAAAAAAGG 136
Query: 165 PPAG--PGGVYAGPEPPPVYTNLSSYSPASASSGGAGAAVGTGSSYPTTTISYLPHAPPF 222
G PGG G P + Y A AA +P + SY P
Sbjct: 137 LALGLHPGGAQGGAGLP---AQAALYGHPVYGYSAAAAAAALAGQHPALSYSY----PQV 189
Query: 223 AGGHPAQLG--LGRGASTFKEEPQTVPEARSRDATPPVSPINMEDQERIKVERKRLR 277
G HPA + GA TF+ + Q + + + P + N + Q + + +R R
Sbjct: 190 QGAHPAHPADPIKLGAGTFQLD-QWLRASTAGMILPKMPDFNSQAQSNLLGKCRRPR 245
>gi|25777671 protein phosphatase 1, regulatory subunit 10 [Homo
sapiens]
Length = 940
Score = 48.1 bits (113), Expect = 1e-05
Identities = 63/234 (26%), Positives = 75/234 (32%), Gaps = 64/234 (27%)
Query: 45 DPYRSLKAPGARGPGPEGGGGGSYFSGQGSDTGASLKLASSELERLIVPNSNGVITTTPT 104
DP R G GPGP G Y G+G G P
Sbjct: 685 DPMRGGPMRGGPGPGP-----GPYHRGRGGRGG----------------------NEPPP 717
Query: 105 PPGQYFYPRGGGSGG----GAGGAGGGVT-----EEQEGFADGFVKALDDLHKMNHVTPP 155
PP + RGG SGG G GG GGG+ EG G + H+ + P
Sbjct: 718 PPPPFRGARGGRSGGGPPNGRGGPGGGMVGGGGHRPHEGPGGGMGNSSG--HRPHE--GP 773
Query: 156 NVSLGATGGPPAGPGGVYAG-------PEPPPVYTNLSSYSPASASSGGAGAAVGTGSSY 208
+G+ P GPGG G P + S + P GG GA G
Sbjct: 774 GGGMGSGHRPHEGPGGSMGGGGGHRPHEGPGGGISGGSGHRPHEGPGGGMGAGGG----- 828
Query: 209 PTTTISYLPHAPP-----FAGGHPAQLGLGRGASTFKEEPQTVPEARSRDATPP 257
+ PH P +GGH G G G P VP R D P
Sbjct: 829 ------HRPHEGPGGSMGGSGGHRPHEGPGHG-GPHGHRPHDVPGHRGHDHRGP 875
Score = 35.0 bits (79), Expect = 0.099
Identities = 50/203 (24%), Positives = 59/203 (29%), Gaps = 65/203 (32%)
Query: 46 PYRSLKAPGARGPGPEGGGGGSYFSGQGSDTGASLKLASSELERLIVPNSNGVITTTPTP 105
PY PG G P+G GG + P
Sbjct: 532 PYVETLEPGGSGGSPDGAGG------------------------------------SKLP 555
Query: 106 PGQYFYPRGGGSGGGAGGAGGGVTEEQEGF-----------ADGFVKALDDLHKMNHVTP 154
P G+G G G GGG QE ++ +K D K+ +
Sbjct: 556 PVLANLMGSMGAGKGPQGPGGGGINVQEILTSIMGSPNSHPSEELLKQPDYSDKIKQMLV 615
Query: 155 PNVSLG----ATGGPPAGPGGVYAGPEPPPVYTNLSSYSPASASSGGAGAAVGTGSSYPT 210
P+ LG A G PP GPGG PP P GG G VG
Sbjct: 616 PHGLLGPGPIANGFPPGGPGGPKGMQHFPP-----GPGGPMPGPHGGPGGPVGP------ 664
Query: 211 TTISYLPHAPPFAGGHPAQLGLG 233
L PP GG P G G
Sbjct: 665 ---RLLGPPPPPRGGDPFWDGPG 684
>gi|24432032 zinc finger protein 503 [Homo sapiens]
Length = 646
Score = 47.8 bits (112), Expect = 1e-05
Identities = 54/223 (24%), Positives = 74/223 (33%), Gaps = 17/223 (7%)
Query: 46 PYRSLKAPGARGPGPEGGGGGSYFSGQGSDTGASLKLASSELERLIVPNSNGVITTTPTP 105
P L + + G G G GGG+ +G LKL+ +E +
Sbjct: 130 PSSKLSSVASNGGGAGGAGGGA--AGDKDTKSGPLKLSDIGVEDKSSFKPYSKPGSDKKE 187
Query: 106 PGQYFYPRGGGSGGGAGGAGGGVTEEQEGF------ADGFVKALDDLHKMNHVTPPNVSL 159
PG GGG GGG GG GGGV+ E+ GF F P L
Sbjct: 188 PGG-----GGGGGGGGGGGGGGVSSEKSGFRVPSATCQPFTPRTGSPSSSASACSPGGML 242
Query: 160 GATGGPPAGPGGVYAGPEPPPVYTNLSSYSPASASSGGAGAAVGTGSSYPTTTISYLPHA 219
+ GG P G + V ASA G G A G S + H
Sbjct: 243 SSAGGAPEGKD----DKKDTDVGGGGKGTGGASAEGGPTGLAHGRISCGGGINVDVNQHP 298
Query: 220 PPFAGGHPAQLGLGRGASTFKEEPQTVPEARSRDATPPVSPIN 262
GG G + + + P + S + V+P++
Sbjct: 299 DGGPGGKALGSDCGGSSGSSSGSGPSAPTSSSVLGSGLVAPVS 341
Score = 41.6 bits (96), Expect = 0.001
Identities = 58/255 (22%), Positives = 85/255 (33%), Gaps = 36/255 (14%)
Query: 25 GGLSLHDYKLLKPSLAVNLADPYRSLKAPGARGPGPEGGGGGSYFSGQGSDTGASLKLAS 84
G L L D + S + P K PG G G GGGGG G S + ++ S
Sbjct: 160 GPLKLSDIGVEDKSSFKPYSKPGSDKKEPGGGGGGGGGGGGG---GGGVSSEKSGFRVPS 216
Query: 85 SELERLIVPNSNGVITTTPTPPGQYFYPRGGGS-----------GGGAGGAGGGVTE-EQ 132
+ + + + + PG GG GGG G GG E
Sbjct: 217 ATCQPFTPRTGSPSSSASACSPGGMLSSAGGAPEGKDDKKDTDVGGGGKGTGGASAEGGP 276
Query: 133 EGFADGFVKALDDLHKMNHVTPPNVSLGATGGPPAGPGGVYAGPEPPPVYTNLSSYSPAS 192
G A G + +++ P GPGG G + + S P++
Sbjct: 277 TGLAHGRISC-----------GGGINVDVNQHPDGGPGGKALGSDCGGSSGSSSGSGPSA 325
Query: 193 ASSG---GAGAAVGTGSSYPTTTISYLPHAPPFAGGHPAQLGLGRGASTFKEEPQTVPEA 249
+S G+G P T+ L PP +P L + PQ +P
Sbjct: 326 PTSSSVLGSGLVAPVSPYKPGQTVFPL---PPAGMTYPGSL----AGAYAGYPPQFLPHG 378
Query: 250 RSRDATPPVSPINME 264
+ D T P S + +
Sbjct: 379 VALDPTKPGSLVGAQ 393
>gi|40288197 GATA binding protein 6 [Homo sapiens]
Length = 595
Score = 46.6 bits (109), Expect = 3e-05
Identities = 54/188 (28%), Positives = 75/188 (39%), Gaps = 39/188 (20%)
Query: 35 LKPSLAVNLADPYRSLKAPGARGPGPEGGGGGSYFSGQGSDTGASLKLASSELERLIVPN 94
L P + Y++L A ++GP G G + + A+ +S + VP
Sbjct: 136 LSPFAPEQPEEMYQTLAALSSQGPAAYDGAPGGFVHSAAAAAAAAAAASSP----VYVPT 191
Query: 95 SNGVITTTPTPPGQYFYPRGGGSGGG--AGGAGGGVTEEQEGFADGFVKALDDLHKMNHV 152
+ PG ++ +G GSG AGGAG G+ +A D
Sbjct: 192 TR----VGSMLPGLPYHLQGSGSGPANHAGGAGAH---------PGWPQASAD------- 231
Query: 153 TPPNVSLG-ATGGPPAGPGGVYAGP---------EPPPVYTNLSSYSP---ASASSGGAG 199
+PP S G A GG AGPGG + P P N ++ P A+A SGGAG
Sbjct: 232 SPPYGSGGGAAGGGAAGPGGAGSAAAHVSARFPYSPSPPMANGAAREPGGYAAAGSGGAG 291
Query: 200 AAVGTGSS 207
G GSS
Sbjct: 292 GVSGGGSS 299
Score = 36.2 bits (82), Expect = 0.045
Identities = 55/244 (22%), Positives = 80/244 (32%), Gaps = 21/244 (8%)
Query: 8 PFYHDDSYTATGYGRAPGGLS------LHDYKLLKPSLAVNLADPYRSLKAPGARGPGPE 61
P S + G R PGG S L P L Y S GP
Sbjct: 38 PISSSSSSCSRGGERGPGGASNCGTPQLDTEAAAGPPARSLLLSSYASHPFGAPHGPSAP 97
Query: 62 G--GGGGSYFSGQGSDTGASLKLASSELERLIVPNSNGVITTTPTPPGQYFYPRGGGSGG 119
G G GG+ S + L A++ + L + P P + + S
Sbjct: 98 GVAGPGGNLSSWEDLLLFTDLDQAATASKLLWSSRGAKLSPFAPEQPEEMYQTLAALSSQ 157
Query: 120 GAG---GAGGGVTEEQEGFADGFVKALDDLH----KMNHVTP--PNVSLGATGGPPAGPG 170
G GA GG A A ++ ++ + P P G+ GP G
Sbjct: 158 GPAAYDGAPGGFVHSAAAAAAAAAAASSPVYVPTTRVGSMLPGLPYHLQGSGSGPANHAG 217
Query: 171 GVYAGPEPPPVYTNLSSYSPASASSGGAGA---AVGTGSSYPTTTISYLPHAPPFAGGHP 227
G A P P + Y ++GG A G+ +++ + Y P +PP A G
Sbjct: 218 GAGAHPGWPQASADSPPYGSGGGAAGGGAAGPGGAGSAAAHVSARFPYSP-SPPMANGAA 276
Query: 228 AQLG 231
+ G
Sbjct: 277 REPG 280
Score = 33.9 bits (76), Expect = 0.22
Identities = 39/147 (26%), Positives = 51/147 (34%), Gaps = 12/147 (8%)
Query: 53 PGARGPGPEGGGGGSYFSGQGSDTGASLKLASSELERLIVPNSNGVITTTPTPPGQYFYP 112
P A P G GG G + G + A+ R S + PG Y
Sbjct: 226 PQASADSPPYGSGGGAAGGGAAGPGGAGSAAAHVSARFPYSPSPPMANGAAREPGGYAAA 285
Query: 113 RGGGSGGGAGGA------GGGVTEEQEGFADGFVKALDDLHKMNHVTPPNVSLGATGGP- 165
GG+GG +GG GG + A + H +H P+ G P
Sbjct: 286 GSGGAGGVSGGGSSLAAMGGREPQYSSLSAARPLNGTYHHHHHHHHHHPSPYSPYVGAPL 345
Query: 166 -PAGPGGVYAGPEPPPVYTNLSSYSPA 191
PA P AGP PV +L S + A
Sbjct: 346 TPAWP----AGPFETPVLHSLQSRAGA 368
>gi|109255251 loricrin [Homo sapiens]
Length = 312
Score = 45.8 bits (107), Expect = 6e-05
Identities = 51/191 (26%), Positives = 71/191 (37%), Gaps = 27/191 (14%)
Query: 54 GARGPGPEGGGGGSYFSGQGSDTGASLKLASSELERLIVPNSNGVITTTPTPPGQYFYPR 113
G G G GGGGG G G +G S+K + +G ++ G +
Sbjct: 62 GGCGGGSSGGGGGGGIGGCGGGSGGSVKYSGGGGSS---GGGSGCFSSGGGGSGCFSSGG 118
Query: 114 GGGSGGGA-------GGAGGGVTEEQEGFADGFVKALDDLHKMNHVTPPNVSLGATGGPP 166
GG SGGG+ GG+ GG + GF V+ S G +G
Sbjct: 119 GGSSGGGSGCFSSGGGGSSGGGSGCFSSGGGGFSGQAVQCQSYGGVSSGGSSGGGSGCFS 178
Query: 167 AGPGGVYAGPEPPPVYTNLSSYSPASASSGGAGAAVGTGSSY----PTTTISYLPHAPPF 222
+G GG ++ YS + GG G++ G+GS Y T S P P +
Sbjct: 179 SGGGG-----------GSVCGYSGGGSGCGG-GSSGGSGSGYVSSQQVTQTSCAPQ-PSY 225
Query: 223 AGGHPAQLGLG 233
GG G G
Sbjct: 226 GGGSSGGGGSG 236
Score = 36.6 bits (83), Expect = 0.034
Identities = 26/74 (35%), Positives = 30/74 (40%), Gaps = 12/74 (16%)
Query: 54 GARGPGPEGGGGGSYFSGQGSDTGASLKLASSELERLIVPNSNGVITTTPTPPGQYFYPR 113
G G G GGGG +F G GS G+S + G + G
Sbjct: 22 GGGGGGGSGGGGCGFFGGGGSGGGSSGSGCGY--------SGGGGYSGGGCGGGS----S 69
Query: 114 GGGSGGGAGGAGGG 127
GGG GGG GG GGG
Sbjct: 70 GGGGGGGIGGCGGG 83
Score = 36.6 bits (83), Expect = 0.034
Identities = 45/166 (27%), Positives = 58/166 (34%), Gaps = 43/166 (25%)
Query: 47 YRSLKAPGARGPGP----EGGGGGSY--FSGQGSDTGASLKLASSELERLIVPNSNGVIT 100
Y + + G+ G G GGGGGS +SG GS G S +S V
Sbjct: 161 YGGVSSGGSSGGGSGCFSSGGGGGSVCGYSGGGSGCGGGSSGGSGSG----YVSSQQVTQ 216
Query: 101 TTPTPPGQYFYPRGGGSGGGAGGAGGGVTEEQEGFADGFVKALDDLHKMNHVTPPNVSLG 160
T+ P Y GGGS GG G G G F+ G
Sbjct: 217 TSCAPQPSY----GGGSSGGGGSGGSGC------FSSG---------------------- 244
Query: 161 ATGGPPAGPGGVYAGPEPPPVYTNLSSYSPASASSGGAGAAVGTGS 206
GG +G GG +G + + S +S GG G + GS
Sbjct: 245 -GGGGSSGCGGGSSGIGSGCIISGGGSVCGGGSSGGGGGGSSVGGS 289
Score = 33.5 bits (75), Expect = 0.29
Identities = 29/104 (27%), Positives = 33/104 (31%), Gaps = 36/104 (34%)
Query: 102 TPTPPGQYFYPRGGGSGGGAGGAGGGVTEEQEGFADGFVKALDDLHKMNHVTPPNVSLGA 161
TP PP GGG GGG G GG GF G G
Sbjct: 9 TPQPPVDCVKTSGGGGGGGGSGGGGC------GFFGG---------------------GG 41
Query: 162 TGGPPAGPGGVYAGPEPPPVYTNLSSYSPASASSGGAGAAVGTG 205
+GG +G G Y+G YS G +G G G
Sbjct: 42 SGGGSSGSGCGYSGG---------GGYSGGGCGGGSSGGGGGGG 76
>gi|55956899 keratin 9 [Homo sapiens]
Length = 623
Score = 45.4 bits (106), Expect = 7e-05
Identities = 45/155 (29%), Positives = 55/155 (35%), Gaps = 33/155 (21%)
Query: 54 GARGPGPEGGGGGSYFSGQGSDTGASLKLASSELERLIVPNSNGVITTTPTPPGQYFYPR 113
G G G GG GGSY G +G S S G Y
Sbjct: 471 GKIGLGGRGGSGGSYGRGSRGGSGGSYGGGGS---------GGG-------------YGG 508
Query: 114 GGGSGGGAGGAGGGVTEEQEGFADGFVKALDDLHKMNHVTPPNVSLGATGGPPAGPGGVY 173
G GS GG+GG+ GG + G G+ H S G+ GG G GG Y
Sbjct: 509 GSGSRGGSGGSYGGGSGSGGGSGGGYGGGSGGGH----------SGGSGGGHSGGSGGNY 558
Query: 174 AGPEPPPVYTNLSSYSPASASSGGAGAAVGTGSSY 208
G + Y S S GG+G + G GS +
Sbjct: 559 GGGSGSGGGSG-GGYGGGSGSRGGSGGSHGGGSGF 592
Score = 35.0 bits (79), Expect = 0.099
Identities = 30/107 (28%), Positives = 37/107 (34%), Gaps = 34/107 (31%)
Query: 49 SLKAPGARGPGPEGGGGGSYFSGQGSDTGASLKLASSELERLIVPNSNGVITTTPTPPGQ 108
S+++ +R GGGGG FS G S ++ G G
Sbjct: 27 SIRSSYSRFSSSGGGGGGGRFSSSSGYGGGSSRVCG---------RGGG---------GS 68
Query: 109 YFYPRGGGSGGG----------------AGGAGGGVTEEQEGFADGF 139
+ Y GGGSGGG GGA GG GF GF
Sbjct: 69 FGYSYGGGSGGGFSASSLGGGFGGGSRGFGGASGGGYSSSGGFGGGF 115
Score = 34.7 bits (78), Expect = 0.13
Identities = 27/77 (35%), Positives = 31/77 (40%), Gaps = 11/77 (14%)
Query: 54 GARGPGPEGGGGGSYFSGQGSDTGASLKLASSELERLIVPNSNGVITTTPTPPGQYFYPR 113
G G G GG GG+Y G GS G+ R S+G G F
Sbjct: 544 GGSGGGHSGGSGGNYGGGSGSGGGSGGGYGGGSGSRGGSGGSHG--------GGSGFGGE 595
Query: 114 GGGSGGG---AGGAGGG 127
GGS GG A G+GGG
Sbjct: 596 SGGSYGGGEEASGSGGG 612
Score = 29.3 bits (64), Expect = 5.4
Identities = 31/115 (26%), Positives = 38/115 (33%), Gaps = 25/115 (21%)
Query: 63 GGGGSYFSGQGSDTGASLKLASSELERLIVPNSNGVITTTPTPPGQYFYPRGGGSGGGAG 122
GGGGS+ G +G ++S L S G + Y GG GGG G
Sbjct: 64 GGGGSFGYSYGGGSGGGF--SASSLGGGFGGGSRGFGGASGGG-----YSSSGGFGGGFG 116
Query: 123 GAGGGVTEEQEGFADGFVKALDDLHKMNHVTPPNVSLGATGGPPAGPGGVYAGPE 177
G GG GF G+ G GG G GG+ E
Sbjct: 117 GGSGG------GFGGGYGSGFGGFG------------GFGGGAGGGDGGILTANE 153
>gi|153792074 proline rich 12 [Homo sapiens]
Length = 2036
Score = 45.4 bits (106), Expect = 7e-05
Identities = 67/221 (30%), Positives = 74/221 (33%), Gaps = 61/221 (27%)
Query: 53 PGARGPGPEGGGGGSY---FSGQGSDTG-ASLKLASSELERLIVPNSNGVITTTPT---- 104
P A G G GGGGG Y G TG A+ R P S T TP
Sbjct: 365 PEAAGGGGAGGGGGGYRPIIQSPGYKTGKGGYGAAAGGATRPPPPRS----TATPKCQSL 420
Query: 105 --PPGQYFYPRGGGSGGGAGGAGG------------GVTEEQEGFADGFVKALDDLHKMN 150
P Y G GAGGAGG G +GF G DL K
Sbjct: 421 GGPAAAY----ATGKASGAGGAGGQAYSPGQPQGLLGPQAYGQGFGGG---QAQDLSK-- 471
Query: 151 HVTPPNVSLGATGGPPAGPGGVYAGPEPPPVYTNLSSYSPASASSGGAG---------AA 201
P+ S GGPP P G PPP SYSP G AA
Sbjct: 472 ---APSYS----GGPPQPPSG-----PPPPGLATCQSYSPDQLQGQLYGVQGEPYPGPAA 519
Query: 202 VGTGSSYPTTTISYLPHAPPFAGGH-----PAQLGLGRGAS 237
G + ++SY P GH P+ LG G AS
Sbjct: 520 HSQGLPTASPSLSYSTGHSPALSGHGGGWGPSSLGGGGEAS 560
Score = 32.7 bits (73), Expect = 0.49
Identities = 46/172 (26%), Positives = 57/172 (33%), Gaps = 38/172 (22%)
Query: 93 PNSNGVITTTPTPPGQYFYPRGGGSGGGAGGAGG-GVTEEQEGFADGFVKALDDLHKMNH 151
P+ G T G+ P G GG GG GG + G+ G
Sbjct: 346 PSKAGPSGATAGASGRATGPEAAGGGGAGGGGGGYRPIIQSPGYKTG------------- 392
Query: 152 VTPPNVSLGATGGPPAGPGGVYAGPEPPPVYTNLSSYSPASASSGGAGAAVGTGSSYPTT 211
GG A GG A PPP S+ +P S GG AA TG +
Sbjct: 393 ----------KGGYGAAAGG--ATRPPPP----RSTATPKCQSLGGPAAAYATGKASGAG 436
Query: 212 TI---SYLPHAPPFAGGHPAQLGLGRGASTFKEEPQTVPEARSRDATPPVSP 260
+Y P P G P G G G + Q + +A S PP P
Sbjct: 437 GAGGQAYSPGQPQGLLG-PQAYGQGFGGG----QAQDLSKAPSYSGGPPQPP 483
Score = 32.3 bits (72), Expect = 0.64
Identities = 52/192 (27%), Positives = 67/192 (34%), Gaps = 35/192 (18%)
Query: 96 NGVITTTP--TPPGQYFYPRGGGSGGGAG-------GAGGGV---TEEQEGFADGFVKA- 142
+ V+ + P PPG Y G G G G G GG TE++E ++A
Sbjct: 591 SSVLASAPFLAPPGAGSYAAGAGGYKGKGDGSELLAGPGGPPAERTEDEEFLIQHLLQAP 650
Query: 143 -------LDDLHKMNHVTPPNVSLGATGGPPAGPGGVYAGPEPPPVYTNLSSYSPASAS- 194
D L + + LG +GG PG Y + P +L S SAS
Sbjct: 651 SPPRTSGADGLVGEDGAADASKGLGGSGGAGGPPGTPYELAKEDPQRYHLQSVIRTSASL 710
Query: 195 SGGAGAAVGTGSSYPTTTISYLPHAPPFAGGHPAQL-------GLGR---GASTFKEEPQ 244
GA AA+ G + P G P L G G GA K P
Sbjct: 711 DEGATAALELGLG----RLKEKKKGPERGGETPEGLATSVVHYGAGAKELGAFLQKSPPP 766
Query: 245 TVPEARSRDATP 256
P A+S TP
Sbjct: 767 PPPTAQSTQPTP 778
Score = 29.3 bits (64), Expect = 5.4
Identities = 27/100 (27%), Positives = 32/100 (32%), Gaps = 25/100 (25%)
Query: 164 GPPAGPGGVYAG---PEPPPVYTNLSSYSPASASSGGAGAAVGTGSSYPTTTISYLPHAP 220
GPP G AG P PP Y Y P AS G T + P+ P
Sbjct: 966 GPPEDEGDPKAGAGPPPGPPAYDPYGPYCPGRASGAGP----------ETPGLGLDPNKP 1015
Query: 221 PFAGGHPAQLGLGRGASTFKEEPQTVPEARSRDATPPVSP 260
P ST EP + ++ A PP P
Sbjct: 1016 P------------ELPSTVNAEPLGLIQSGPHQAAPPPPP 1043
Score = 28.5 bits (62), Expect = 9.3
Identities = 23/71 (32%), Positives = 26/71 (36%), Gaps = 4/71 (5%)
Query: 159 LGATGGPPAGPGGVYAGPEPPPVYTNLSSYSPASASSGGAGAAVGTGSSYPTTTISYLPH 218
LG PP PG P+PPP +L + ASS A AA S P
Sbjct: 219 LGPAQTPPYRPGP----PDPPPPPRHLPTQFNLLASSSAAAAAAEQSSPQLYNFSGAAPG 274
Query: 219 APPFAGGHPAQ 229
PP P Q
Sbjct: 275 PPPPERALPRQ 285
>gi|45827690 BTB and CNC homology 1 transcription factor isoform a
[Homo sapiens]
Length = 736
Score = 44.7 bits (104), Expect = 1e-04
Identities = 25/63 (39%), Positives = 38/63 (60%), Gaps = 7/63 (11%)
Query: 273 RKRLRNRLAATKCRKRKLERIARLEDKVKTLKAENAGL-------SSTAGLLREQVAQLK 325
R+R +NR+AA +CRKRKL+ I LE +++ L++E L ST G ++ + L
Sbjct: 562 RRRSKNRIAAQRCRKRKLDCIQNLESEIEKLQSEKESLLKERDHILSTLGETKQNLTGLC 621
Query: 326 QKV 328
QKV
Sbjct: 622 QKV 624
>gi|4502353 BTB and CNC homology 1 transcription factor isoform a
[Homo sapiens]
Length = 736
Score = 44.7 bits (104), Expect = 1e-04
Identities = 25/63 (39%), Positives = 38/63 (60%), Gaps = 7/63 (11%)
Query: 273 RKRLRNRLAATKCRKRKLERIARLEDKVKTLKAENAGL-------SSTAGLLREQVAQLK 325
R+R +NR+AA +CRKRKL+ I LE +++ L++E L ST G ++ + L
Sbjct: 562 RRRSKNRIAAQRCRKRKLDCIQNLESEIEKLQSEKESLLKERDHILSTLGETKQNLTGLC 621
Query: 326 QKV 328
QKV
Sbjct: 622 QKV 624
>gi|4885245 FOS-like antigen 2 [Homo sapiens]
Length = 326
Score = 44.3 bits (103), Expect = 2e-04
Identities = 32/116 (27%), Positives = 57/116 (49%), Gaps = 10/116 (8%)
Query: 217 PHAP-PFAGGHPAQLGLGRGASTFKEEPQTVPEARSRDATPPVSPINMEDQERIKVERKR 275
P++P P P + L R K TV R + P E++E+ ++ R+R
Sbjct: 81 PYSPLPGLASVPGHMALPR-PGVIKTIGTTVGRRRRDEQLSP------EEEEKRRIRRER 133
Query: 276 LRNRLAATKCRKRKLERIARLEDKVKTLKAENAGLSSTAGLLREQVAQLKQKVMTH 331
N+LAA KCR R+ E +L+ + + L+ E +GL L+++ +L+ ++ H
Sbjct: 134 --NKLAAAKCRNRRRELTEKLQAETEELEEEKSGLQKEIAELQKEKEKLEFMLVAH 187
>gi|55956910 meningioma 1 [Homo sapiens]
Length = 1320
Score = 44.3 bits (103), Expect = 2e-04
Identities = 58/222 (26%), Positives = 76/222 (34%), Gaps = 46/222 (20%)
Query: 59 GPEGGGGGSYFSGQGSDTGASLKLASSELERLIVPNSNGVITTTPTPPGQYFYPRGGGSG 118
GP GG F +G TGA +L + E + + + + PPG R GGSG
Sbjct: 593 GPVGGLAQPNFEREGGSTGAG-RLGTFEQQAPHLAQESAWFSGPHPPPGDLLPRRMGGSG 651
Query: 119 GGA---------------GGAG----GGVTEEQEGFADGFVKALDDLHKMNHVTPPNVSL 159
A GG+G G + E +G V AL P +
Sbjct: 652 LPADCGPHDPSLAPPPPPGGSGVLFRGPLQEPMRMPGEGHVPALPS---------PGLQF 702
Query: 160 GATGG-------PPAGPGGVYAGPE---PPPVYTNLSSYSPASASSGGAGAAVGTGSSYP 209
G + G P AG G A E PPP + SA G G G
Sbjct: 703 GGSLGGLGQLQSPGAGVGLPSAASERRPPPPDFAT-------SALGGQPGFPFGAAGRQS 755
Query: 210 TTTISYLPHAPPFAGGHPAQLGLGRGASTFKEEPQTVPEARS 251
T ++PP AGG G G G + +P P R+
Sbjct: 756 TPHSGPGVNSPPSAGGGGGSSGGGGGGGAYPPQPDFQPSQRT 797
Score = 34.3 bits (77), Expect = 0.17
Identities = 30/93 (32%), Positives = 37/93 (39%), Gaps = 21/93 (22%)
Query: 53 PGARGPGPEGGG--GGSYFSGQGSDTGASLKLASSELERLIVP----------------N 94
P PG + GG GG GQ GA + L S+ ER P
Sbjct: 693 PALPSPGLQFGGSLGGL---GQLQSPGAGVGLPSAASERRPPPPDFATSALGGQPGFPFG 749
Query: 95 SNGVITTTPTPPGQYFYPRGGGSGGGAGGAGGG 127
+ G +T + PG P GG GG +GG GGG
Sbjct: 750 AAGRQSTPHSGPGVNSPPSAGGGGGSSGGGGGG 782
Score = 30.0 bits (66), Expect = 3.2
Identities = 22/71 (30%), Positives = 28/71 (39%), Gaps = 5/71 (7%)
Query: 165 PPAGPGGVYAGPEPPPVYTNL-----SSYSPASASSGGAGAAVGTGSSYPTTTISYLPHA 219
PP G G GP+ PP L S+ +P S GG GT T + A
Sbjct: 1085 PPRGVGAGEHGPKAPPPALGLGIMSNSTSTPDSYGGGGGPGHPGTPGLEQVRTPTSSSGA 1144
Query: 220 PPFAGGHPAQL 230
PP HP ++
Sbjct: 1145 PPPDEIHPLEI 1155
>gi|33188461 GATA binding protein 4 [Homo sapiens]
Length = 442
Score = 43.9 bits (102), Expect = 2e-04
Identities = 47/169 (27%), Positives = 61/169 (36%), Gaps = 45/169 (26%)
Query: 47 YRSLKAPGARGPGP---EGGGGGSYFSGQGSDTGASLKLASSELERLIVPNSNGVITTTP 103
Y+SL GP P E GG G++ G G+ S+ V TP
Sbjct: 2 YQSLAMAANHGPPPGAYEAGGPGAFMHGAGAA-------------------SSPVYVPTP 42
Query: 104 TPPGQYF---YPRGGGSGGGAGGAGGGVTEEQEGFADGFVKALDDLHKMNHVTPPNVSLG 160
P Y +GGG+G +GGA GG G A G P G
Sbjct: 43 RVPSSVLGLSYLQGGGAGSASGGASGG---SSGGAASG--------------AGPGTQQG 85
Query: 161 ATGGPPAGPGGVYAGPEPPPVYTNLS-SYSPASASSGGAGAAVGTGSSY 208
+ G AG G A PPPV S + S ++ A AA ++Y
Sbjct: 86 SPGWSQAGADG--AAYTPPPVSPRFSFPGTTGSLAAAAAAAAAREAAAY 132
>gi|28872800 CCAAT/enhancer binding protein epsilon [Homo sapiens]
Length = 281
Score = 43.9 bits (102), Expect = 2e-04
Identities = 70/282 (24%), Positives = 101/282 (35%), Gaps = 62/282 (21%)
Query: 112 PRGGG-----SGGGAGGAGGGVTEEQEGFAD-------GFVKALDDLHKMNHVTPPNVSL 159
PRGG SGG AG G E E D G + L DL V P +
Sbjct: 11 PRGGQQPLEFSGGRAGPGELGDMCEHEASIDLSAYIESGEEQLLSDLFA---VKPAPEAR 67
Query: 160 GATG-GPPAGPGGVYAGPEP----------------PPVYTNLSSYSPASAS-----SGG 197
G G G PA P + P P P +Y++ SY P + + G
Sbjct: 68 GLKGPGTPAFPHYLPPDPRPFAYPPHTFGPDRKALGPGIYSSPGSYDPRAVAVKEEPRGP 127
Query: 198 AGAAVGTGSSYPTTTISY-LPHAPPFAGGHPAQLGLGRGASTFKEEPQTVPEARSRDATP 256
G+ + SY + Y + H A P L +P V +A A P
Sbjct: 128 EGSRAASRGSY--NPLQYQVAHCGQTAMHLPPTLAA-------PGQPLRVLKAPLATAAP 178
Query: 257 PVSPI--------------NMEDQERIKVERKRLRNRLAATKCRKRKLERIARLEDKVKT 302
P SP+ +++ ++ +R RN +A K R + RI + KV
Sbjct: 179 PCSPLLKAPSPAGPLHKGKKAVNKDSLEYRLRRERNNIAVRKSRDKAKRRILETQQKVLE 238
Query: 303 LKAENAGLSSTAGLLREQVAQLKQKVMTHVSNGCQLLLGVKG 344
AEN L S L +++ L+ + + L+ GV G
Sbjct: 239 YMAENERLRSRVEQLTQELDTLR-NLFRQIPEAANLIKGVGG 279
>gi|28872794 CCAAT/enhancer binding protein alpha [Homo sapiens]
Length = 358
Score = 43.5 bits (101), Expect = 3e-04
Identities = 64/287 (22%), Positives = 91/287 (31%), Gaps = 60/287 (20%)
Query: 59 GPEGGGGGSYFSGQGSDTGASLKLASSELERLIVPNSNGVITTTPTPPGQYFYPRGGGSG 118
GP GGGGG F G+ G P G
Sbjct: 96 GPTGGGGGGDFDYPGAPAG----------------------------------PGGAVMP 121
Query: 119 GGAGGAGGGVTEEQEGFADGFVKALDDLHKMNHVTPPNVS-----------LGATG---- 163
GGA G G G+ DG ++ L + + P + L G
Sbjct: 122 GGAHGPPPGYGCAAAGYLDGRLEPLYERVGAPALRPLVIKQEPREEDEAKQLALAGLFPY 181
Query: 164 GPPAGPGGVYAGPEPPPVYTNLSSYSPASASSGGAGAAVGTGSSYPTTTISYLPHAPPFA 223
PP P + P PPP + A G + G P T PH P
Sbjct: 182 QPPPPPPPSHPHPHPPPAHLAAPHLQFQIAHCGQTTMHLQPGHPTPPPTPVPSPHPAPAL 241
Query: 224 GGHPAQLGLGRGASTFKEEPQTVPEARSRDATPPVSPINMEDQERIKVERKRLRNRLAAT 283
G GL S K P+ R+ + D+ + +R RN +A
Sbjct: 242 GA----AGLPGPGSALKGLGAAHPDLRASGGSGAGKAKKSVDKNSNEYRVRRERNNIAVR 297
Query: 284 KCRKRKLERIARLEDKVKTLKAENAGLSSTAGLLREQVAQLKQKVMT 330
K R + +R + KV L ++N LR++V QL +++ T
Sbjct: 298 KSRDKAKQRNVETQQKVLELTSDN-------DRLRKRVEQLSRELDT 337
>gi|8924246 basic leucine zipper transcription factor, ATF-like 3
[Homo sapiens]
Length = 127
Score = 43.5 bits (101), Expect = 3e-04
Identities = 33/109 (30%), Positives = 56/109 (51%), Gaps = 14/109 (12%)
Query: 232 LGRGASTFKEEPQTVPEARSRDATPPVSPINMEDQERIKVERKRLRNRLAATKCRKRKLE 291
L R + +PQ P+ +S ED +R KV R+R +NR+AA + RK++ +
Sbjct: 12 LQRSVAAPGNQPQPQPQQQSP-----------EDDDR-KV-RRREKNRVAAQRSRKKQTQ 58
Query: 292 RIARLEDKVKTLKAENAGLSSTAGLLREQVAQLKQKVMTHVSNGCQLLL 340
+ +L ++ ++L+ EN L G L E++ L + + H C LLL
Sbjct: 59 KADKLHEEYESLEQENTMLRREIGKLTEELKHLTEALKEH-EKMCPLLL 106
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.311 0.133 0.394
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,187,940
Number of Sequences: 37866
Number of extensions: 1149527
Number of successful extensions: 13631
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 290
Number of HSP's successfully gapped in prelim test: 582
Number of HSP's that attempted gapping in prelim test: 7997
Number of HSP's gapped (non-prelim): 3782
length of query: 347
length of database: 18,247,518
effective HSP length: 103
effective length of query: 244
effective length of database: 14,347,320
effective search space: 3500746080
effective search space used: 3500746080
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.