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Search of human proteins with 4504777
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4504777 integrin, beta 7 [Homo sapiens]
(798 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4504777 integrin, beta 7 [Homo sapiens] 1667 0.0
gi|188595677 integrin, beta 2 precursor [Homo sapiens] 717 0.0
gi|89191865 integrin, beta 2 precursor [Homo sapiens] 717 0.0
gi|19743813 integrin beta 1 isoform 1A precursor [Homo sapiens] 702 0.0
gi|19743823 integrin beta 1 isoform 1A precursor [Homo sapiens] 702 0.0
gi|19743819 integrin beta 1 isoform 1D precursor [Homo sapiens] 692 0.0
gi|19743821 integrin beta 1 isoform 1C-2 precursor [Homo sapiens] 676 0.0
gi|19743817 integrin beta 1 isoform 1C-1 precursor [Homo sapiens] 676 0.0
gi|19743815 integrin beta 1 isoform 1B precursor [Homo sapiens] 676 0.0
gi|47078292 integrin beta chain, beta 3 precursor [Homo sapiens] 568 e-162
gi|9625002 integrin, beta 6 [Homo sapiens] 567 e-161
gi|20127446 integrin, beta 5 [Homo sapiens] 560 e-159
gi|4504779 integrin, beta 8 precursor [Homo sapiens] 403 e-112
gi|54607027 integrin beta 4 isoform 2 precursor [Homo sapiens] 387 e-107
gi|54607035 integrin beta 4 isoform 1 precursor [Homo sapiens] 387 e-107
gi|54607033 integrin beta 4 isoform 3 precursor [Homo sapiens] 387 e-107
gi|4758614 integrin, beta-like 1 (with EGF-like repeat domains) ... 116 9e-26
gi|122937400 odz, odd Oz/ten-m homolog 3 [Homo sapiens] 90 9e-18
gi|188528648 tenascin XB isoform 1 precursor [Homo sapiens] 85 2e-16
gi|169790825 odz, odd Oz/ten-m homolog 4 [Homo sapiens] 82 2e-15
gi|110347400 odz, odd Oz/ten-m homolog 1 isoform 3 [Homo sapiens] 80 6e-15
gi|253970446 odz, odd Oz/ten-m homolog 1 isoform 2 [Homo sapiens] 80 6e-15
gi|253970444 odz, odd Oz/ten-m homolog 1 isoform 1 [Homo sapiens] 80 6e-15
gi|62988324 tenascin N [Homo sapiens] 79 1e-14
gi|170016091 odz, odd Oz/ten-m homolog 2 [Homo sapiens] 78 3e-14
gi|157384973 tenascin R [Homo sapiens] 77 6e-14
gi|153946395 tenascin C precursor [Homo sapiens] 74 4e-13
gi|24586659 scavenger receptor class F, member 2 isoform 1 [Homo... 67 7e-11
gi|33598937 scavenger receptor class F, member 2 isoform 2 [Homo... 67 7e-11
gi|14192943 multiple EGF-like-domains 10 [Homo sapiens] 64 7e-10
>gi|4504777 integrin, beta 7 [Homo sapiens]
Length = 798
Score = 1667 bits (4318), Expect = 0.0
Identities = 798/798 (100%), Positives = 798/798 (100%)
Query: 1 MVALPMVLVLLLVLSRGESELDAKIPSTGDATEWRNPHLSMLGSCQPAPSCQKCILSHPS 60
MVALPMVLVLLLVLSRGESELDAKIPSTGDATEWRNPHLSMLGSCQPAPSCQKCILSHPS
Sbjct: 1 MVALPMVLVLLLVLSRGESELDAKIPSTGDATEWRNPHLSMLGSCQPAPSCQKCILSHPS 60
Query: 61 CAWCKQLNFTASGEAEARRCARREELLARGCPLEELEEPRGQQEVLQDQPLSQGARGEGA 120
CAWCKQLNFTASGEAEARRCARREELLARGCPLEELEEPRGQQEVLQDQPLSQGARGEGA
Sbjct: 61 CAWCKQLNFTASGEAEARRCARREELLARGCPLEELEEPRGQQEVLQDQPLSQGARGEGA 120
Query: 121 TQLAPQRVRVTLRPGEPQQLQVRFLRAEGYPVDLYYLMDLSYSMKDDLERVRQLGHALLV 180
TQLAPQRVRVTLRPGEPQQLQVRFLRAEGYPVDLYYLMDLSYSMKDDLERVRQLGHALLV
Sbjct: 121 TQLAPQRVRVTLRPGEPQQLQVRFLRAEGYPVDLYYLMDLSYSMKDDLERVRQLGHALLV 180
Query: 181 RLQEVTHSVRIGFGSFVDKTVLPFVSTVPSKLRHPCPTRLERCQSPFSFHHVLSLTGDAQ 240
RLQEVTHSVRIGFGSFVDKTVLPFVSTVPSKLRHPCPTRLERCQSPFSFHHVLSLTGDAQ
Sbjct: 181 RLQEVTHSVRIGFGSFVDKTVLPFVSTVPSKLRHPCPTRLERCQSPFSFHHVLSLTGDAQ 240
Query: 241 AFEREVGRQSVSGNLDSPEGGFDAILQAALCQEQIGWRNVSRLLVFTSDDTFHTAGDGKL 300
AFEREVGRQSVSGNLDSPEGGFDAILQAALCQEQIGWRNVSRLLVFTSDDTFHTAGDGKL
Sbjct: 241 AFEREVGRQSVSGNLDSPEGGFDAILQAALCQEQIGWRNVSRLLVFTSDDTFHTAGDGKL 300
Query: 301 GGIFMPSDGHCHLDSNGLYSRSTEFDYPSVGQVAQALSAANIQPIFAVTSAALPVYQELS 360
GGIFMPSDGHCHLDSNGLYSRSTEFDYPSVGQVAQALSAANIQPIFAVTSAALPVYQELS
Sbjct: 301 GGIFMPSDGHCHLDSNGLYSRSTEFDYPSVGQVAQALSAANIQPIFAVTSAALPVYQELS 360
Query: 361 KLIPKSAVGELSEDSSNVVQLIMDAYNSLSSTVTLEHSSLPPGVHISYESQCEGPEKREG 420
KLIPKSAVGELSEDSSNVVQLIMDAYNSLSSTVTLEHSSLPPGVHISYESQCEGPEKREG
Sbjct: 361 KLIPKSAVGELSEDSSNVVQLIMDAYNSLSSTVTLEHSSLPPGVHISYESQCEGPEKREG 420
Query: 421 KAEDRGQCNHVRINQTVTFWVSLQATHCLPEPHLLRLRALGFSEELIVELHTLCDCNCSD 480
KAEDRGQCNHVRINQTVTFWVSLQATHCLPEPHLLRLRALGFSEELIVELHTLCDCNCSD
Sbjct: 421 KAEDRGQCNHVRINQTVTFWVSLQATHCLPEPHLLRLRALGFSEELIVELHTLCDCNCSD 480
Query: 481 TQPQAPHCSDGQGHLQCGVCSCAPGRLGRLCECSVAELSSPDLESGCRAPNGTGPLCSGK 540
TQPQAPHCSDGQGHLQCGVCSCAPGRLGRLCECSVAELSSPDLESGCRAPNGTGPLCSGK
Sbjct: 481 TQPQAPHCSDGQGHLQCGVCSCAPGRLGRLCECSVAELSSPDLESGCRAPNGTGPLCSGK 540
Query: 541 GHCQCGRCSCSGQSSGHLCECDDASCERHEGILCGGFGRCQCGVCHCHANRTGRACECSG 600
GHCQCGRCSCSGQSSGHLCECDDASCERHEGILCGGFGRCQCGVCHCHANRTGRACECSG
Sbjct: 541 GHCQCGRCSCSGQSSGHLCECDDASCERHEGILCGGFGRCQCGVCHCHANRTGRACECSG 600
Query: 601 DMDSCISPEGGLCSGHGRCKCNRCQCLDGYYGALCDQCPGCKTPCERHRDCAECGAFRTG 660
DMDSCISPEGGLCSGHGRCKCNRCQCLDGYYGALCDQCPGCKTPCERHRDCAECGAFRTG
Sbjct: 601 DMDSCISPEGGLCSGHGRCKCNRCQCLDGYYGALCDQCPGCKTPCERHRDCAECGAFRTG 660
Query: 661 PLATNCSTACAHTNVTLALAPILDDGWCKERTLDNQLFFFLVEDDARGTVVLRVRPQEKG 720
PLATNCSTACAHTNVTLALAPILDDGWCKERTLDNQLFFFLVEDDARGTVVLRVRPQEKG
Sbjct: 661 PLATNCSTACAHTNVTLALAPILDDGWCKERTLDNQLFFFLVEDDARGTVVLRVRPQEKG 720
Query: 721 ADHTQAIVLGCVGGIVAVGLGLVLAYRLSVEIYDRREYSRFEKEQQQLNWKQDSNPLYKS 780
ADHTQAIVLGCVGGIVAVGLGLVLAYRLSVEIYDRREYSRFEKEQQQLNWKQDSNPLYKS
Sbjct: 721 ADHTQAIVLGCVGGIVAVGLGLVLAYRLSVEIYDRREYSRFEKEQQQLNWKQDSNPLYKS 780
Query: 781 AITTTINPRFQEADSPTL 798
AITTTINPRFQEADSPTL
Sbjct: 781 AITTTINPRFQEADSPTL 798
>gi|188595677 integrin, beta 2 precursor [Homo sapiens]
Length = 769
Score = 717 bits (1852), Expect = 0.0
Identities = 363/755 (48%), Positives = 481/755 (63%), Gaps = 28/755 (3%)
Query: 50 SCQKCILSHPSCAWCKQLNFTASGEAEARRCARREELLARGCPLEELEEPRGQQEVLQDQ 109
SC++CI S P C WC++LNFT G+ ++ RC R +LL RGC +++ +P E +D
Sbjct: 32 SCRECIESGPGCTWCQKLNFTGPGDPDSIRCDTRPQLLMRGCAADDIMDPTSLAETQEDH 91
Query: 110 PLSQGARGEGATQLAPQRVRVTLRPGEPQQLQVRFLRAEGYPVDLYYLMDLSYSMKDDLE 169
G QL+PQ+V + LRPG+ V F RA+GYP+DLYYLMDLSYSM DDL
Sbjct: 92 -------NGGQKQLSPQKVTLYLRPGQAAAFNVTFRRAKGYPIDLYYLMDLSYSMLDDLR 144
Query: 170 RVRQLGHALLVRLQEVTHSVRIGFGSFVDKTVLPFVSTVPSKLRHPCPTRLERCQSPFSF 229
V++LG LL L E+T S RIGFGSFVDKTVLPFV+T P KLR+PCP + + CQ PF+F
Sbjct: 145 NVKKLGGDLLRALNEITESGRIGFGSFVDKTVLPFVNTHPDKLRNPCPNKEKECQPPFAF 204
Query: 230 HHVLSLTGDAQAFEREVGRQSVSGNLDSPEGGFDAILQAALCQEQIGWRNVSRLLVFTSD 289
HVL LT ++ F+ EVG+Q +SGNLD+PEGG DA++Q A C E+IGWRNV+RLLVF +D
Sbjct: 205 RHVLKLTNNSNQFQTEVGKQLISGNLDAPEGGLDAMMQVAACPEEIGWRNVTRLLVFATD 264
Query: 290 DTFHTAGDGKLGGIFMPSDGHCHLDSNGLYSRSTEFDYPSVGQVAQALSAANIQPIFAVT 349
D FH AGDGKLG I P+DG CHL+ N LY RS EFDYPSVGQ+A L+ NIQPIFAVT
Sbjct: 265 DGFHFAGDGKLGAILTPNDGRCHLEDN-LYKRSNEFDYPSVGQLAHKLAENNIQPIFAVT 323
Query: 350 SAALPVYQELSKLIPKSAVGELSEDSSNVVQLIMDAYNSLSSTVTLEHSSLPPGVHISYE 409
S + Y++L+++IPKSAVGELSEDSSNVVQLI +AYN LSS V L+H++LP + ++Y+
Sbjct: 324 SRMVKTYEKLTEIIPKSAVGELSEDSSNVVQLIKNAYNKLSSRVFLDHNALPDTLKVTYD 383
Query: 410 SQCEGPEKREGKAEDRGQCNHVRINQTVTFWVSLQATHCLPEPHLLRLRALGFSEELIVE 469
S C + + RG C+ V+IN +TF V + AT C+ E + +RALGF++ + V+
Sbjct: 384 SFCSNGVTH--RNQPRGDCDGVQINVPITFQVKVTATECIQEQSFV-IRALGFTDIVTVQ 440
Query: 470 LHTLCDCNCSDTQPQAPHCSDGQGHLQCGVCSCAPGRLGRLCECSVAELSSPDLESGCRA 529
+ C+C C D C G+G L+CG+C C G +G+ CEC SS +LE CR
Sbjct: 441 VLPQCECRCRDQSRDRSLC-HGKGFLECGICRCDTGYIGKNCECQTQGRSSQELEGSCRK 499
Query: 530 PNGTGPLCSGKGHCQCGRCSCSGQS------SGHLCECDDASCERHEGILCGGFGR--CQ 581
N + +CSG G C CG+C C G CECD +CER+ G +CGG GR C
Sbjct: 500 DNNS-IICSGLGDCVCGQCLCHTSDVPGKLIYGQYCECDTINCERYNGQVCGGPGRGLCF 558
Query: 582 CGVCHCHANRTGRACECSGDMDSCISPEGGLCSGHGRCKCNRCQCLDGYYGALCDQCPGC 641
CG C CH G AC+C + C++P CSG GRC+CN C+C GY LC +CPGC
Sbjct: 559 CGKCRCHPGFEGSACQCERTTEGCLNPRRVECSGRGRCRCNVCECHSGYQLPLCQECPGC 618
Query: 642 KTPCERHRDCAECGAFRTGPLATNCSTACAHTNVTLALAPILDDGWCKERTLDN-QLFFF 700
+PC ++ CAEC F GP NCS AC + L+ P+ CKER + + +
Sbjct: 619 PSPCGKYISCAECLKFEKGPFGKNCSAAC--PGLQLSNNPV-KGRTCKERDSEGCWVAYT 675
Query: 701 LVEDDARGTVVLRVRPQEK--GADHTQAIVLGCVGGIVAVGLGLVLAYRLSVEIYDRREY 758
L + D ++ V + + AIV G V GIV +G+ L++ ++ + + D REY
Sbjct: 676 LEQQDGMDRYLIYVDESRECVAGPNIAAIVGGTVAGIVLIGILLLVIWKALIHLSDLREY 735
Query: 759 SRFEKEQQQLNWKQDSNPLYKSAITTTINPRFQEA 793
RFEKE+ + W D NPL+KSA TT +NP+F E+
Sbjct: 736 RRFEKEKLKSQWNND-NPLFKSATTTVMNPKFAES 769
>gi|89191865 integrin, beta 2 precursor [Homo sapiens]
Length = 769
Score = 717 bits (1852), Expect = 0.0
Identities = 363/755 (48%), Positives = 481/755 (63%), Gaps = 28/755 (3%)
Query: 50 SCQKCILSHPSCAWCKQLNFTASGEAEARRCARREELLARGCPLEELEEPRGQQEVLQDQ 109
SC++CI S P C WC++LNFT G+ ++ RC R +LL RGC +++ +P E +D
Sbjct: 32 SCRECIESGPGCTWCQKLNFTGPGDPDSIRCDTRPQLLMRGCAADDIMDPTSLAETQEDH 91
Query: 110 PLSQGARGEGATQLAPQRVRVTLRPGEPQQLQVRFLRAEGYPVDLYYLMDLSYSMKDDLE 169
G QL+PQ+V + LRPG+ V F RA+GYP+DLYYLMDLSYSM DDL
Sbjct: 92 -------NGGQKQLSPQKVTLYLRPGQAAAFNVTFRRAKGYPIDLYYLMDLSYSMLDDLR 144
Query: 170 RVRQLGHALLVRLQEVTHSVRIGFGSFVDKTVLPFVSTVPSKLRHPCPTRLERCQSPFSF 229
V++LG LL L E+T S RIGFGSFVDKTVLPFV+T P KLR+PCP + + CQ PF+F
Sbjct: 145 NVKKLGGDLLRALNEITESGRIGFGSFVDKTVLPFVNTHPDKLRNPCPNKEKECQPPFAF 204
Query: 230 HHVLSLTGDAQAFEREVGRQSVSGNLDSPEGGFDAILQAALCQEQIGWRNVSRLLVFTSD 289
HVL LT ++ F+ EVG+Q +SGNLD+PEGG DA++Q A C E+IGWRNV+RLLVF +D
Sbjct: 205 RHVLKLTNNSNQFQTEVGKQLISGNLDAPEGGLDAMMQVAACPEEIGWRNVTRLLVFATD 264
Query: 290 DTFHTAGDGKLGGIFMPSDGHCHLDSNGLYSRSTEFDYPSVGQVAQALSAANIQPIFAVT 349
D FH AGDGKLG I P+DG CHL+ N LY RS EFDYPSVGQ+A L+ NIQPIFAVT
Sbjct: 265 DGFHFAGDGKLGAILTPNDGRCHLEDN-LYKRSNEFDYPSVGQLAHKLAENNIQPIFAVT 323
Query: 350 SAALPVYQELSKLIPKSAVGELSEDSSNVVQLIMDAYNSLSSTVTLEHSSLPPGVHISYE 409
S + Y++L+++IPKSAVGELSEDSSNVVQLI +AYN LSS V L+H++LP + ++Y+
Sbjct: 324 SRMVKTYEKLTEIIPKSAVGELSEDSSNVVQLIKNAYNKLSSRVFLDHNALPDTLKVTYD 383
Query: 410 SQCEGPEKREGKAEDRGQCNHVRINQTVTFWVSLQATHCLPEPHLLRLRALGFSEELIVE 469
S C + + RG C+ V+IN +TF V + AT C+ E + +RALGF++ + V+
Sbjct: 384 SFCSNGVTH--RNQPRGDCDGVQINVPITFQVKVTATECIQEQSFV-IRALGFTDIVTVQ 440
Query: 470 LHTLCDCNCSDTQPQAPHCSDGQGHLQCGVCSCAPGRLGRLCECSVAELSSPDLESGCRA 529
+ C+C C D C G+G L+CG+C C G +G+ CEC SS +LE CR
Sbjct: 441 VLPQCECRCRDQSRDRSLC-HGKGFLECGICRCDTGYIGKNCECQTQGRSSQELEGSCRK 499
Query: 530 PNGTGPLCSGKGHCQCGRCSCSGQS------SGHLCECDDASCERHEGILCGGFGR--CQ 581
N + +CSG G C CG+C C G CECD +CER+ G +CGG GR C
Sbjct: 500 DNNS-IICSGLGDCVCGQCLCHTSDVPGKLIYGQYCECDTINCERYNGQVCGGPGRGLCF 558
Query: 582 CGVCHCHANRTGRACECSGDMDSCISPEGGLCSGHGRCKCNRCQCLDGYYGALCDQCPGC 641
CG C CH G AC+C + C++P CSG GRC+CN C+C GY LC +CPGC
Sbjct: 559 CGKCRCHPGFEGSACQCERTTEGCLNPRRVECSGRGRCRCNVCECHSGYQLPLCQECPGC 618
Query: 642 KTPCERHRDCAECGAFRTGPLATNCSTACAHTNVTLALAPILDDGWCKERTLDN-QLFFF 700
+PC ++ CAEC F GP NCS AC + L+ P+ CKER + + +
Sbjct: 619 PSPCGKYISCAECLKFEKGPFGKNCSAAC--PGLQLSNNPV-KGRTCKERDSEGCWVAYT 675
Query: 701 LVEDDARGTVVLRVRPQEK--GADHTQAIVLGCVGGIVAVGLGLVLAYRLSVEIYDRREY 758
L + D ++ V + + AIV G V GIV +G+ L++ ++ + + D REY
Sbjct: 676 LEQQDGMDRYLIYVDESRECVAGPNIAAIVGGTVAGIVLIGILLLVIWKALIHLSDLREY 735
Query: 759 SRFEKEQQQLNWKQDSNPLYKSAITTTINPRFQEA 793
RFEKE+ + W D NPL+KSA TT +NP+F E+
Sbjct: 736 RRFEKEKLKSQWNND-NPLFKSATTTVMNPKFAES 769
>gi|19743813 integrin beta 1 isoform 1A precursor [Homo sapiens]
Length = 798
Score = 702 bits (1812), Expect = 0.0
Identities = 347/770 (45%), Positives = 489/770 (63%), Gaps = 31/770 (4%)
Query: 48 APSCQKCILSHPSCAWCKQLNFTASGEAEARRCARREELLARGCPLEELEEPRGQQEVLQ 107
A SC +CI + P+C WC F G + RC E L +GCP +++E PRG +++ +
Sbjct: 32 AKSCGECIQAGPNCGWCTNSTFLQEGMPTSARCDDLEALKKKGCPPDDIENPRGSKDIKK 91
Query: 108 DQPLSQGARG-------EGATQLAPQRVRVTLRPGEPQQLQVRFLRAEGYPVDLYYLMDL 160
++ ++ ++G E TQ+ PQ++ + LR GEPQ ++F RAE YP+DLYYLMDL
Sbjct: 92 NKNVTNRSKGTAEKLKPEDITQIQPQQLVLRLRSGEPQTFTLKFKRAEDYPIDLYYLMDL 151
Query: 161 SYSMKDDLERVRQLGHALLVRLQEVTHSVRIGFGSFVDKTVLPFVSTVPSKLRHPCPTRL 220
SYSMKDDLE V+ LG L+ ++ +T RIGFGSFV+KTV+P++ST P+KLR+PC T
Sbjct: 152 SYSMKDDLENVKSLGTDLMNEMRRITSDFRIGFGSFVEKTVMPYISTTPAKLRNPC-TSE 210
Query: 221 ERCQSPFSFHHVLSLTGDAQAFEREVGRQSVSGNLDSPEGGFDAILQAALCQEQIGWRNV 280
+ C SPFS+ +VLSLT + F VG+Q +SGNLDSPEGGFDAI+Q A+C IGWRNV
Sbjct: 211 QNCTSPFSYKNVLSLTNKGEVFNELVGKQRISGNLDSPEGGFDAIMQVAVCGSLIGWRNV 270
Query: 281 SRLLVFTSDDTFHTAGDGKLGGIFMPSDGHCHLDSNGLYSRSTEFDYPSVGQVAQALSAA 340
+RLLVF++D FH AGDGKLGGI +P+DG CHL++N +Y+ S +DYPS+ + Q LS
Sbjct: 271 TRLLVFSTDAGFHFAGDGKLGGIVLPNDGQCHLENN-MYTMSHYYDYPSIAHLVQKLSEN 329
Query: 341 NIQPIFAVTSAALPVYQELSKLIPKSAVGELSEDSSNVVQLIMDAYNSLSSTVTLEHSSL 400
NIQ IFAVT PVY+EL LIPKSAVG LS +SSNV+QLI+DAYNSLSS V LE+ L
Sbjct: 330 NIQTIFAVTEEFQPVYKELKNLIPKSAVGTLSANSSNVIQLIIDAYNSLSSEVILENGKL 389
Query: 401 PPGVHISYESQCEGPEKREGKAEDRGQCNHVRINQTVTFWVSLQATHC-LPEPHLLRLRA 459
GV ISY+S C+ G E+ +C+++ I V F +S+ + C + ++R
Sbjct: 390 SEGVTISYKSYCKNGV--NGTGENGRKCSNISIGDEVQFEISITSNKCPKKDSDSFKIRP 447
Query: 460 LGFSEELIVELHTLCDCNC-SDTQPQAPHCSDGQGHLQCGVCSCAPGRLGRLCECSVAEL 518
LGF+EE+ V L +C+C C S+ P++P C +G G +CG C C GR+GR CECS E+
Sbjct: 448 LGFTEEVEVILQYICECECQSEGIPESPKCHEGNGTFECGACRCNEGRVGRHCECSTDEV 507
Query: 519 SSPDLESGCRAPNGTGPLCSGKGHCQCGRCSCSGQS------SGHLCECDDASCERHEGI 572
+S D+++ CR N + +CS G C CG+C C + SG CECD+ +C+R G+
Sbjct: 508 NSEDMDAYCRKEN-SSEICSNNGECVCGQCVCRKRDNTNEIYSGKFCECDNFNCDRSNGL 566
Query: 573 LCGGFGRCQCGVCHCHANRTGRACECSGDMDSCISPEGGLCSGHGRCKCNRCQCLD-GYY 631
+CGG G C+C VC C+ N TG AC+CS D +C + G +C+G G C+C C+C D +
Sbjct: 567 ICGGNGVCKCRVCECNPNYTGSACDCSLDTSTCEASNGQICNGRGICECGVCKCTDPKFQ 626
Query: 632 GALCDQCPGCKTPCERHRDCAECGAFRTGPLATNCSTACAHTNVTLALA------PILDD 685
G C+ C C C H++C +C AF G C+ C++ N+T + P+ D
Sbjct: 627 GQTCEMCQTCLGVCAEHKECVQCRAFNKGEKKDTCTQECSYFNITKVESRDKLPQPVQPD 686
Query: 686 --GWCKERTLDNQLFFFLVEDDARGTVVLRV--RPQEKGADHTQAIVLGCVGGIVAVGLG 741
CKE+ +D+ F+F + V++ V P+ IV G V GIV +GL
Sbjct: 687 PVSHCKEKDVDDCWFYFTYSVNGNNEVMVHVVENPECPTGPDIIPIVAGVVAGIVLIGLA 746
Query: 742 LVLAYRLSVEIYDRREYSRFEKEQQQLNWKQDSNPLYKSAITTTINPRFQ 791
L+L ++L + I+DRRE+++FEKE+ W NP+YKSA+TT +NP+++
Sbjct: 747 LLLIWKLLMIIHDRREFAKFEKEKMNAKWDTGENPIYKSAVTTVVNPKYE 796
>gi|19743823 integrin beta 1 isoform 1A precursor [Homo sapiens]
Length = 798
Score = 702 bits (1812), Expect = 0.0
Identities = 347/770 (45%), Positives = 489/770 (63%), Gaps = 31/770 (4%)
Query: 48 APSCQKCILSHPSCAWCKQLNFTASGEAEARRCARREELLARGCPLEELEEPRGQQEVLQ 107
A SC +CI + P+C WC F G + RC E L +GCP +++E PRG +++ +
Sbjct: 32 AKSCGECIQAGPNCGWCTNSTFLQEGMPTSARCDDLEALKKKGCPPDDIENPRGSKDIKK 91
Query: 108 DQPLSQGARG-------EGATQLAPQRVRVTLRPGEPQQLQVRFLRAEGYPVDLYYLMDL 160
++ ++ ++G E TQ+ PQ++ + LR GEPQ ++F RAE YP+DLYYLMDL
Sbjct: 92 NKNVTNRSKGTAEKLKPEDITQIQPQQLVLRLRSGEPQTFTLKFKRAEDYPIDLYYLMDL 151
Query: 161 SYSMKDDLERVRQLGHALLVRLQEVTHSVRIGFGSFVDKTVLPFVSTVPSKLRHPCPTRL 220
SYSMKDDLE V+ LG L+ ++ +T RIGFGSFV+KTV+P++ST P+KLR+PC T
Sbjct: 152 SYSMKDDLENVKSLGTDLMNEMRRITSDFRIGFGSFVEKTVMPYISTTPAKLRNPC-TSE 210
Query: 221 ERCQSPFSFHHVLSLTGDAQAFEREVGRQSVSGNLDSPEGGFDAILQAALCQEQIGWRNV 280
+ C SPFS+ +VLSLT + F VG+Q +SGNLDSPEGGFDAI+Q A+C IGWRNV
Sbjct: 211 QNCTSPFSYKNVLSLTNKGEVFNELVGKQRISGNLDSPEGGFDAIMQVAVCGSLIGWRNV 270
Query: 281 SRLLVFTSDDTFHTAGDGKLGGIFMPSDGHCHLDSNGLYSRSTEFDYPSVGQVAQALSAA 340
+RLLVF++D FH AGDGKLGGI +P+DG CHL++N +Y+ S +DYPS+ + Q LS
Sbjct: 271 TRLLVFSTDAGFHFAGDGKLGGIVLPNDGQCHLENN-MYTMSHYYDYPSIAHLVQKLSEN 329
Query: 341 NIQPIFAVTSAALPVYQELSKLIPKSAVGELSEDSSNVVQLIMDAYNSLSSTVTLEHSSL 400
NIQ IFAVT PVY+EL LIPKSAVG LS +SSNV+QLI+DAYNSLSS V LE+ L
Sbjct: 330 NIQTIFAVTEEFQPVYKELKNLIPKSAVGTLSANSSNVIQLIIDAYNSLSSEVILENGKL 389
Query: 401 PPGVHISYESQCEGPEKREGKAEDRGQCNHVRINQTVTFWVSLQATHC-LPEPHLLRLRA 459
GV ISY+S C+ G E+ +C+++ I V F +S+ + C + ++R
Sbjct: 390 SEGVTISYKSYCKNGV--NGTGENGRKCSNISIGDEVQFEISITSNKCPKKDSDSFKIRP 447
Query: 460 LGFSEELIVELHTLCDCNC-SDTQPQAPHCSDGQGHLQCGVCSCAPGRLGRLCECSVAEL 518
LGF+EE+ V L +C+C C S+ P++P C +G G +CG C C GR+GR CECS E+
Sbjct: 448 LGFTEEVEVILQYICECECQSEGIPESPKCHEGNGTFECGACRCNEGRVGRHCECSTDEV 507
Query: 519 SSPDLESGCRAPNGTGPLCSGKGHCQCGRCSCSGQS------SGHLCECDDASCERHEGI 572
+S D+++ CR N + +CS G C CG+C C + SG CECD+ +C+R G+
Sbjct: 508 NSEDMDAYCRKEN-SSEICSNNGECVCGQCVCRKRDNTNEIYSGKFCECDNFNCDRSNGL 566
Query: 573 LCGGFGRCQCGVCHCHANRTGRACECSGDMDSCISPEGGLCSGHGRCKCNRCQCLD-GYY 631
+CGG G C+C VC C+ N TG AC+CS D +C + G +C+G G C+C C+C D +
Sbjct: 567 ICGGNGVCKCRVCECNPNYTGSACDCSLDTSTCEASNGQICNGRGICECGVCKCTDPKFQ 626
Query: 632 GALCDQCPGCKTPCERHRDCAECGAFRTGPLATNCSTACAHTNVTLALA------PILDD 685
G C+ C C C H++C +C AF G C+ C++ N+T + P+ D
Sbjct: 627 GQTCEMCQTCLGVCAEHKECVQCRAFNKGEKKDTCTQECSYFNITKVESRDKLPQPVQPD 686
Query: 686 --GWCKERTLDNQLFFFLVEDDARGTVVLRV--RPQEKGADHTQAIVLGCVGGIVAVGLG 741
CKE+ +D+ F+F + V++ V P+ IV G V GIV +GL
Sbjct: 687 PVSHCKEKDVDDCWFYFTYSVNGNNEVMVHVVENPECPTGPDIIPIVAGVVAGIVLIGLA 746
Query: 742 LVLAYRLSVEIYDRREYSRFEKEQQQLNWKQDSNPLYKSAITTTINPRFQ 791
L+L ++L + I+DRRE+++FEKE+ W NP+YKSA+TT +NP+++
Sbjct: 747 LLLIWKLLMIIHDRREFAKFEKEKMNAKWDTGENPIYKSAVTTVVNPKYE 796
>gi|19743819 integrin beta 1 isoform 1D precursor [Homo sapiens]
Length = 801
Score = 692 bits (1787), Expect = 0.0
Identities = 345/769 (44%), Positives = 483/769 (62%), Gaps = 31/769 (4%)
Query: 48 APSCQKCILSHPSCAWCKQLNFTASGEAEARRCARREELLARGCPLEELEEPRGQQEVLQ 107
A SC +CI + P+C WC F G + RC E L +GCP +++E PRG +++ +
Sbjct: 32 AKSCGECIQAGPNCGWCTNSTFLQEGMPTSARCDDLEALKKKGCPPDDIENPRGSKDIKK 91
Query: 108 DQPLSQGARG-------EGATQLAPQRVRVTLRPGEPQQLQVRFLRAEGYPVDLYYLMDL 160
++ ++ ++G E TQ+ PQ++ + LR GEPQ ++F RAE YP+DLYYLMDL
Sbjct: 92 NKNVTNRSKGTAEKLKPEDITQIQPQQLVLRLRSGEPQTFTLKFKRAEDYPIDLYYLMDL 151
Query: 161 SYSMKDDLERVRQLGHALLVRLQEVTHSVRIGFGSFVDKTVLPFVSTVPSKLRHPCPTRL 220
SYSMKDDLE V+ LG L+ ++ +T RIGFGSFV+KTV+P++ST P+KLR+PC T
Sbjct: 152 SYSMKDDLENVKSLGTDLMNEMRRITSDFRIGFGSFVEKTVMPYISTTPAKLRNPC-TSE 210
Query: 221 ERCQSPFSFHHVLSLTGDAQAFEREVGRQSVSGNLDSPEGGFDAILQAALCQEQIGWRNV 280
+ C SPFS+ +VLSLT + F VG+Q +SGNLDSPEGGFDAI+Q A+C IGWRNV
Sbjct: 211 QNCTSPFSYKNVLSLTNKGEVFNELVGKQRISGNLDSPEGGFDAIMQVAVCGSLIGWRNV 270
Query: 281 SRLLVFTSDDTFHTAGDGKLGGIFMPSDGHCHLDSNGLYSRSTEFDYPSVGQVAQALSAA 340
+RLLVF++D FH AGDGKLGGI +P+DG CHL++N +Y+ S +DYPS+ + Q LS
Sbjct: 271 TRLLVFSTDAGFHFAGDGKLGGIVLPNDGQCHLENN-MYTMSHYYDYPSIAHLVQKLSEN 329
Query: 341 NIQPIFAVTSAALPVYQELSKLIPKSAVGELSEDSSNVVQLIMDAYNSLSSTVTLEHSSL 400
NIQ IFAVT PVY+EL LIPKSAVG LS +SSNV+QLI+DAYNSLSS V LE+ L
Sbjct: 330 NIQTIFAVTEEFQPVYKELKNLIPKSAVGTLSANSSNVIQLIIDAYNSLSSEVILENGKL 389
Query: 401 PPGVHISYESQCEGPEKREGKAEDRGQCNHVRINQTVTFWVSLQATHC-LPEPHLLRLRA 459
GV ISY+S C+ G E+ +C+++ I V F +S+ + C + ++R
Sbjct: 390 SEGVTISYKSYCKNGV--NGTGENGRKCSNISIGDEVQFEISITSNKCPKKDSDSFKIRP 447
Query: 460 LGFSEELIVELHTLCDCNC-SDTQPQAPHCSDGQGHLQCGVCSCAPGRLGRLCECSVAEL 518
LGF+EE+ V L +C+C C S+ P++P C +G G +CG C C GR+GR CECS E+
Sbjct: 448 LGFTEEVEVILQYICECECQSEGIPESPKCHEGNGTFECGACRCNEGRVGRHCECSTDEV 507
Query: 519 SSPDLESGCRAPNGTGPLCSGKGHCQCGRCSCSGQS------SGHLCECDDASCERHEGI 572
+S D+++ CR N + +CS G C CG+C C + SG CECD+ +C+R G+
Sbjct: 508 NSEDMDAYCRKEN-SSEICSNNGECVCGQCVCRKRDNTNEIYSGKFCECDNFNCDRSNGL 566
Query: 573 LCGGFGRCQCGVCHCHANRTGRACECSGDMDSCISPEGGLCSGHGRCKCNRCQCLD-GYY 631
+CGG G C+C VC C+ N TG AC+CS D +C + G +C+G G C+C C+C D +
Sbjct: 567 ICGGNGVCKCRVCECNPNYTGSACDCSLDTSTCEASNGQICNGRGICECGVCKCTDPKFQ 626
Query: 632 GALCDQCPGCKTPCERHRDCAECGAFRTGPLATNCSTACAHTNVTLALA------PILDD 685
G C+ C C C H++C +C AF G C+ C++ N+T + P+ D
Sbjct: 627 GQTCEMCQTCLGVCAEHKECVQCRAFNKGEKKDTCTQECSYFNITKVESRDKLPQPVQPD 686
Query: 686 --GWCKERTLDNQLFFFLVEDDARGTVVLRV--RPQEKGADHTQAIVLGCVGGIVAVGLG 741
CKE+ +D+ F+F + V++ V P+ IV G V GIV +GL
Sbjct: 687 PVSHCKEKDVDDCWFYFTYSVNGNNEVMVHVVENPECPTGPDIIPIVAGVVAGIVLIGLA 746
Query: 742 LVLAYRLSVEIYDRREYSRFEKEQQQLNWKQDSNPLYKSAITTTINPRF 790
L+L ++L + I+DRRE+++FEKE+ W NP+YKS I NP +
Sbjct: 747 LLLIWKLLMIIHDRREFAKFEKEKMNAKWDTQENPIYKSPINNFKNPNY 795
>gi|19743821 integrin beta 1 isoform 1C-2 precursor [Homo sapiens]
Length = 819
Score = 676 bits (1745), Expect = 0.0
Identities = 340/771 (44%), Positives = 479/771 (62%), Gaps = 31/771 (4%)
Query: 48 APSCQKCILSHPSCAWCKQLNFTASGEAEARRCARREELLARGCPLEELEEPRGQQEVLQ 107
A SC +CI + P+C WC F G + RC E L +GCP +++E PRG +++ +
Sbjct: 32 AKSCGECIQAGPNCGWCTNSTFLQEGMPTSARCDDLEALKKKGCPPDDIENPRGSKDIKK 91
Query: 108 DQPLSQGARG-------EGATQLAPQRVRVTLRPGEPQQLQVRFLRAEGYPVDLYYLMDL 160
++ ++ ++G E TQ+ PQ++ + LR GEPQ ++F RAE YP+DLYYLMDL
Sbjct: 92 NKNVTNRSKGTAEKLKPEDITQIQPQQLVLRLRSGEPQTFTLKFKRAEDYPIDLYYLMDL 151
Query: 161 SYSMKDDLERVRQLGHALLVRLQEVTHSVRIGFGSFVDKTVLPFVSTVPSKLRHPCPTRL 220
SYSMKDDLE V+ LG L+ ++ +T RIGFGSFV+KTV+P++ST P+KLR+PC T
Sbjct: 152 SYSMKDDLENVKSLGTDLMNEMRRITSDFRIGFGSFVEKTVMPYISTTPAKLRNPC-TSE 210
Query: 221 ERCQSPFSFHHVLSLTGDAQAFEREVGRQSVSGNLDSPEGGFDAILQAALCQEQIGWRNV 280
+ C SPFS+ +VLSLT + F VG+Q +SGNLDSPEGGFDAI+Q A+C IGWRNV
Sbjct: 211 QNCTSPFSYKNVLSLTNKGEVFNELVGKQRISGNLDSPEGGFDAIMQVAVCGSLIGWRNV 270
Query: 281 SRLLVFTSDDTFHTAGDGKLGGIFMPSDGHCHLDSNGLYSRSTEFDYPSVGQVAQALSAA 340
+RLLVF++D FH AGDGKLGGI +P+DG CHL++N +Y+ S +DYPS+ + Q LS
Sbjct: 271 TRLLVFSTDAGFHFAGDGKLGGIVLPNDGQCHLENN-MYTMSHYYDYPSIAHLVQKLSEN 329
Query: 341 NIQPIFAVTSAALPVYQELSKLIPKSAVGELSEDSSNVVQLIMDAYNSLSSTVTLEHSSL 400
NIQ IFAVT PVY+EL LIPKSAVG LS +SSNV+QLI+DAYNSLSS V LE+ L
Sbjct: 330 NIQTIFAVTEEFQPVYKELKNLIPKSAVGTLSANSSNVIQLIIDAYNSLSSEVILENGKL 389
Query: 401 PPGVHISYESQCEGPEKREGKAEDRGQCNHVRINQTVTFWVSLQATHC-LPEPHLLRLRA 459
GV ISY+S C+ G E+ +C+++ I V F +S+ + C + ++R
Sbjct: 390 SEGVTISYKSYCKNGV--NGTGENGRKCSNISIGDEVQFEISITSNKCPKKDSDSFKIRP 447
Query: 460 LGFSEELIVELHTLCDCNC-SDTQPQAPHCSDGQGHLQCGVCSCAPGRLGRLCECSVAEL 518
LGF+EE+ V L +C+C C S+ P++P C +G G +CG C C GR+GR CECS E+
Sbjct: 448 LGFTEEVEVILQYICECECQSEGIPESPKCHEGNGTFECGACRCNEGRVGRHCECSTDEV 507
Query: 519 SSPDLESGCRAPNGTGPLCSGKGHCQCGRCSCSGQS------SGHLCECDDASCERHEGI 572
+S D+++ CR N + +CS G C CG+C C + SG CECD+ +C+R G+
Sbjct: 508 NSEDMDAYCRKEN-SSEICSNNGECVCGQCVCRKRDNTNEIYSGKFCECDNFNCDRSNGL 566
Query: 573 LCGGFGRCQCGVCHCHANRTGRACECSGDMDSCISPEGGLCSGHGRCKCNRCQCLD-GYY 631
+CGG G C+C VC C+ N TG AC+CS D +C + G +C+G G C+C C+C D +
Sbjct: 567 ICGGNGVCKCRVCECNPNYTGSACDCSLDTSTCEASNGQICNGRGICECGVCKCTDPKFQ 626
Query: 632 GALCDQCPGCKTPCERHRDCAECGAFRTGPLATNCSTACAHTNVTLALA------PILDD 685
G C+ C C C H++C +C AF G C+ C++ N+T + P+ D
Sbjct: 627 GQTCEMCQTCLGVCAEHKECVQCRAFNKGEKKDTCTQECSYFNITKVESRDKLPQPVQPD 686
Query: 686 --GWCKERTLDNQLFFFLVEDDARGTVVLRV--RPQEKGADHTQAIVLGCVGGIVAVGLG 741
CKE+ +D+ F+F + V++ V P+ IV G V GIV +GL
Sbjct: 687 PVSHCKEKDVDDCWFYFTYSVNGNNEVMVHVVENPECPTGPDIIPIVAGVVAGIVLIGLA 746
Query: 742 LVLAYRLSVEIYDRREYSRFEKEQQQLNWKQDSNPLYKSAITTTINPRFQE 792
L+L ++L + I+DRRE+++FEKE+ W + + RFQ+
Sbjct: 747 LLLIWKLLMIIHDRREFAKFEKEKMNAKWDTPGVQWCDISSLQPLTSRFQQ 797
>gi|19743817 integrin beta 1 isoform 1C-1 precursor [Homo sapiens]
Length = 825
Score = 676 bits (1744), Expect = 0.0
Identities = 337/749 (44%), Positives = 473/749 (63%), Gaps = 31/749 (4%)
Query: 48 APSCQKCILSHPSCAWCKQLNFTASGEAEARRCARREELLARGCPLEELEEPRGQQEVLQ 107
A SC +CI + P+C WC F G + RC E L +GCP +++E PRG +++ +
Sbjct: 32 AKSCGECIQAGPNCGWCTNSTFLQEGMPTSARCDDLEALKKKGCPPDDIENPRGSKDIKK 91
Query: 108 DQPLSQGARG-------EGATQLAPQRVRVTLRPGEPQQLQVRFLRAEGYPVDLYYLMDL 160
++ ++ ++G E TQ+ PQ++ + LR GEPQ ++F RAE YP+DLYYLMDL
Sbjct: 92 NKNVTNRSKGTAEKLKPEDITQIQPQQLVLRLRSGEPQTFTLKFKRAEDYPIDLYYLMDL 151
Query: 161 SYSMKDDLERVRQLGHALLVRLQEVTHSVRIGFGSFVDKTVLPFVSTVPSKLRHPCPTRL 220
SYSMKDDLE V+ LG L+ ++ +T RIGFGSFV+KTV+P++ST P+KLR+PC T
Sbjct: 152 SYSMKDDLENVKSLGTDLMNEMRRITSDFRIGFGSFVEKTVMPYISTTPAKLRNPC-TSE 210
Query: 221 ERCQSPFSFHHVLSLTGDAQAFEREVGRQSVSGNLDSPEGGFDAILQAALCQEQIGWRNV 280
+ C SPFS+ +VLSLT + F VG+Q +SGNLDSPEGGFDAI+Q A+C IGWRNV
Sbjct: 211 QNCTSPFSYKNVLSLTNKGEVFNELVGKQRISGNLDSPEGGFDAIMQVAVCGSLIGWRNV 270
Query: 281 SRLLVFTSDDTFHTAGDGKLGGIFMPSDGHCHLDSNGLYSRSTEFDYPSVGQVAQALSAA 340
+RLLVF++D FH AGDGKLGGI +P+DG CHL++N +Y+ S +DYPS+ + Q LS
Sbjct: 271 TRLLVFSTDAGFHFAGDGKLGGIVLPNDGQCHLENN-MYTMSHYYDYPSIAHLVQKLSEN 329
Query: 341 NIQPIFAVTSAALPVYQELSKLIPKSAVGELSEDSSNVVQLIMDAYNSLSSTVTLEHSSL 400
NIQ IFAVT PVY+EL LIPKSAVG LS +SSNV+QLI+DAYNSLSS V LE+ L
Sbjct: 330 NIQTIFAVTEEFQPVYKELKNLIPKSAVGTLSANSSNVIQLIIDAYNSLSSEVILENGKL 389
Query: 401 PPGVHISYESQCEGPEKREGKAEDRGQCNHVRINQTVTFWVSLQATHC-LPEPHLLRLRA 459
GV ISY+S C+ G E+ +C+++ I V F +S+ + C + ++R
Sbjct: 390 SEGVTISYKSYCKNGV--NGTGENGRKCSNISIGDEVQFEISITSNKCPKKDSDSFKIRP 447
Query: 460 LGFSEELIVELHTLCDCNC-SDTQPQAPHCSDGQGHLQCGVCSCAPGRLGRLCECSVAEL 518
LGF+EE+ V L +C+C C S+ P++P C +G G +CG C C GR+GR CECS E+
Sbjct: 448 LGFTEEVEVILQYICECECQSEGIPESPKCHEGNGTFECGACRCNEGRVGRHCECSTDEV 507
Query: 519 SSPDLESGCRAPNGTGPLCSGKGHCQCGRCSCSGQS------SGHLCECDDASCERHEGI 572
+S D+++ CR N + +CS G C CG+C C + SG CECD+ +C+R G+
Sbjct: 508 NSEDMDAYCRKEN-SSEICSNNGECVCGQCVCRKRDNTNEIYSGKFCECDNFNCDRSNGL 566
Query: 573 LCGGFGRCQCGVCHCHANRTGRACECSGDMDSCISPEGGLCSGHGRCKCNRCQCLD-GYY 631
+CGG G C+C VC C+ N TG AC+CS D +C + G +C+G G C+C C+C D +
Sbjct: 567 ICGGNGVCKCRVCECNPNYTGSACDCSLDTSTCEASNGQICNGRGICECGVCKCTDPKFQ 626
Query: 632 GALCDQCPGCKTPCERHRDCAECGAFRTGPLATNCSTACAHTNVTLALA------PILDD 685
G C+ C C C H++C +C AF G C+ C++ N+T + P+ D
Sbjct: 627 GQTCEMCQTCLGVCAEHKECVQCRAFNKGEKKDTCTQECSYFNITKVESRDKLPQPVQPD 686
Query: 686 --GWCKERTLDNQLFFFLVEDDARGTVVLRV--RPQEKGADHTQAIVLGCVGGIVAVGLG 741
CKE+ +D+ F+F + V++ V P+ IV G V GIV +GL
Sbjct: 687 PVSHCKEKDVDDCWFYFTYSVNGNNEVMVHVVENPECPTGPDIIPIVAGVVAGIVLIGLA 746
Query: 742 LVLAYRLSVEIYDRREYSRFEKEQQQLNW 770
L+L ++L + I+DRRE+++FEKE+ W
Sbjct: 747 LLLIWKLLMIIHDRREFAKFEKEKMNAKW 775
>gi|19743815 integrin beta 1 isoform 1B precursor [Homo sapiens]
Length = 789
Score = 676 bits (1744), Expect = 0.0
Identities = 337/749 (44%), Positives = 473/749 (63%), Gaps = 31/749 (4%)
Query: 48 APSCQKCILSHPSCAWCKQLNFTASGEAEARRCARREELLARGCPLEELEEPRGQQEVLQ 107
A SC +CI + P+C WC F G + RC E L +GCP +++E PRG +++ +
Sbjct: 32 AKSCGECIQAGPNCGWCTNSTFLQEGMPTSARCDDLEALKKKGCPPDDIENPRGSKDIKK 91
Query: 108 DQPLSQGARG-------EGATQLAPQRVRVTLRPGEPQQLQVRFLRAEGYPVDLYYLMDL 160
++ ++ ++G E TQ+ PQ++ + LR GEPQ ++F RAE YP+DLYYLMDL
Sbjct: 92 NKNVTNRSKGTAEKLKPEDITQIQPQQLVLRLRSGEPQTFTLKFKRAEDYPIDLYYLMDL 151
Query: 161 SYSMKDDLERVRQLGHALLVRLQEVTHSVRIGFGSFVDKTVLPFVSTVPSKLRHPCPTRL 220
SYSMKDDLE V+ LG L+ ++ +T RIGFGSFV+KTV+P++ST P+KLR+PC T
Sbjct: 152 SYSMKDDLENVKSLGTDLMNEMRRITSDFRIGFGSFVEKTVMPYISTTPAKLRNPC-TSE 210
Query: 221 ERCQSPFSFHHVLSLTGDAQAFEREVGRQSVSGNLDSPEGGFDAILQAALCQEQIGWRNV 280
+ C SPFS+ +VLSLT + F VG+Q +SGNLDSPEGGFDAI+Q A+C IGWRNV
Sbjct: 211 QNCTSPFSYKNVLSLTNKGEVFNELVGKQRISGNLDSPEGGFDAIMQVAVCGSLIGWRNV 270
Query: 281 SRLLVFTSDDTFHTAGDGKLGGIFMPSDGHCHLDSNGLYSRSTEFDYPSVGQVAQALSAA 340
+RLLVF++D FH AGDGKLGGI +P+DG CHL++N +Y+ S +DYPS+ + Q LS
Sbjct: 271 TRLLVFSTDAGFHFAGDGKLGGIVLPNDGQCHLENN-MYTMSHYYDYPSIAHLVQKLSEN 329
Query: 341 NIQPIFAVTSAALPVYQELSKLIPKSAVGELSEDSSNVVQLIMDAYNSLSSTVTLEHSSL 400
NIQ IFAVT PVY+EL LIPKSAVG LS +SSNV+QLI+DAYNSLSS V LE+ L
Sbjct: 330 NIQTIFAVTEEFQPVYKELKNLIPKSAVGTLSANSSNVIQLIIDAYNSLSSEVILENGKL 389
Query: 401 PPGVHISYESQCEGPEKREGKAEDRGQCNHVRINQTVTFWVSLQATHC-LPEPHLLRLRA 459
GV ISY+S C+ G E+ +C+++ I V F +S+ + C + ++R
Sbjct: 390 SEGVTISYKSYCKNGV--NGTGENGRKCSNISIGDEVQFEISITSNKCPKKDSDSFKIRP 447
Query: 460 LGFSEELIVELHTLCDCNC-SDTQPQAPHCSDGQGHLQCGVCSCAPGRLGRLCECSVAEL 518
LGF+EE+ V L +C+C C S+ P++P C +G G +CG C C GR+GR CECS E+
Sbjct: 448 LGFTEEVEVILQYICECECQSEGIPESPKCHEGNGTFECGACRCNEGRVGRHCECSTDEV 507
Query: 519 SSPDLESGCRAPNGTGPLCSGKGHCQCGRCSCSGQS------SGHLCECDDASCERHEGI 572
+S D+++ CR N + +CS G C CG+C C + SG CECD+ +C+R G+
Sbjct: 508 NSEDMDAYCRKEN-SSEICSNNGECVCGQCVCRKRDNTNEIYSGKFCECDNFNCDRSNGL 566
Query: 573 LCGGFGRCQCGVCHCHANRTGRACECSGDMDSCISPEGGLCSGHGRCKCNRCQCLD-GYY 631
+CGG G C+C VC C+ N TG AC+CS D +C + G +C+G G C+C C+C D +
Sbjct: 567 ICGGNGVCKCRVCECNPNYTGSACDCSLDTSTCEASNGQICNGRGICECGVCKCTDPKFQ 626
Query: 632 GALCDQCPGCKTPCERHRDCAECGAFRTGPLATNCSTACAHTNVTLALA------PILDD 685
G C+ C C C H++C +C AF G C+ C++ N+T + P+ D
Sbjct: 627 GQTCEMCQTCLGVCAEHKECVQCRAFNKGEKKDTCTQECSYFNITKVESRDKLPQPVQPD 686
Query: 686 --GWCKERTLDNQLFFFLVEDDARGTVVLRV--RPQEKGADHTQAIVLGCVGGIVAVGLG 741
CKE+ +D+ F+F + V++ V P+ IV G V GIV +GL
Sbjct: 687 PVSHCKEKDVDDCWFYFTYSVNGNNEVMVHVVENPECPTGPDIIPIVAGVVAGIVLIGLA 746
Query: 742 LVLAYRLSVEIYDRREYSRFEKEQQQLNW 770
L+L ++L + I+DRRE+++FEKE+ W
Sbjct: 747 LLLIWKLLMIIHDRREFAKFEKEKMNAKW 775
>gi|47078292 integrin beta chain, beta 3 precursor [Homo sapiens]
Length = 788
Score = 568 bits (1465), Expect = e-162
Identities = 304/757 (40%), Positives = 434/757 (57%), Gaps = 31/757 (4%)
Query: 50 SCQKCILSHPSCAWCKQLNFTASGEAEARRCARREELLARGCPLEELEEPRGQQEVLQDQ 109
SCQ+C+ P CAWC RC +E LL C E +E P + VL+D+
Sbjct: 38 SCQQCLAVSPMCAWCSDEALPLGSP----RCDLKENLLKDNCAPESIEFPVSEARVLEDR 93
Query: 110 PLSQGARGEGA--TQLAPQRVRVTLRPGEPQQLQVRFLRAEGYPVDLYYLMDLSYSMKDD 167
PLS G+ + TQ++PQR+ + LRP + + ++ + E YPVD+YYLMDLSYSMKDD
Sbjct: 94 PLSDKGSGDSSQVTQVSPQRIALRLRPDDSKNFSIQVRQVEDYPVDIYYLMDLSYSMKDD 153
Query: 168 LERVRQLGHALLVRLQEVTHSVRIGFGSFVDKTVLPFVS-TVPSKLRHPCPTRLERCQSP 226
L ++ LG L +++++T ++RIGFG+FVDK V P++ + P L +PC C
Sbjct: 154 LWSIQNLGTKLATQMRKLTSNLRIGFGAFVDKPVSPYMYISPPEALENPCYDMKTTCLPM 213
Query: 227 FSFHHVLSLTGDAQAFEREVGRQSVSGNLDSPEGGFDAILQAALCQEQIGWRN-VSRLLV 285
F + HVL+LT F EV +QSVS N D+PEGGFDAI+QA +C E+IGWRN S LLV
Sbjct: 214 FGYKHVLTLTDQVTRFNEEVKKQSVSRNRDAPEGGFDAIMQATVCDEKIGWRNDASHLLV 273
Query: 286 FTSDDTFHTAGDGKLGGIFMPSDGHCHLDSNGLYSRSTEFDYPSVGQVAQALSAANIQPI 345
FT+D H A DG+L GI P+DG CH+ S+ YS ST DYPS+G + + LS NI I
Sbjct: 274 FTTDAKTHIALDGRLAGIVQPNDGQCHVGSDNHYSASTTMDYPSLGLMTEKLSQKNINLI 333
Query: 346 FAVTSAALPVYQELSKLIPKSAVGELSEDSSNVVQLIMDAYNSLSSTVTLEHSSLPPGVH 405
FAVT + +YQ S+LIP + VG LS DSSNV+QLI+DAY + S V LE LP +
Sbjct: 334 FAVTENVVNLYQNYSELIPGTTVGVLSMDSSNVLQLIVDAYGKIRSKVELEVRDLPEELS 393
Query: 406 ISYESQCEGPEKREGKAEDRGQCNHVRINQTVTFWVSLQATHCLPEPH-LLRLRALGFSE 464
+S+ + C E G C ++I TV+F + + C E ++ +GF +
Sbjct: 394 LSFNATCLNNEVIPGLK----SCMGLKIGDTVSFSIEAKVRGCPQEKEKSFTIKPVGFKD 449
Query: 465 ELIVELHTLCDCNC-SDTQPQAPHCSDGQGHLQCGVCSCAPGRLGRLCECSVAELSSPDL 523
LIV++ CDC C + +P + C++G G +CGVC C PG LG CECS E P
Sbjct: 450 SLIVQVTFDCDCACQAQAEPNSHRCNNGNGTFECGVCRCGPGWLGSQCECS-EEDYRPSQ 508
Query: 524 ESGCRAPNGTGPLCSGKGHCQCGRCSCS----GQSSGHLCECDDASCERHEGILCGGFGR 579
+ C +P P+CS +G C CG+C C G+ +G CECDD SC R++G +C G G+
Sbjct: 509 QDEC-SPREGQPVCSQRGECLCGQCVCHSSDFGKITGKYCECDDFSCVRYKGEMCSGHGQ 567
Query: 580 CQCGVCHCHANRTGRACECSGDMDSCISPEGGLCSGHGRCKCNRCQCLD-GYYGALCDQC 638
C CG C C ++ TG C C+ D+C+S G LCSG G+C+C C C+ G YG C++C
Sbjct: 568 CSCGDCLCDSDWTGYYCNCTTRTDTCMSSNGLLCSGRGKCECGSCVCIQPGSYGDTCEKC 627
Query: 639 PGCKTPCERHRDCAECGAFRTGPL--ATNCSTACAHTNVTLALAPILDDGW----CKERT 692
P C C ++C EC F G L C+ C + ++ + D G C +
Sbjct: 628 PTCPDACTFKKECVECKKFDRGALHDENTCNRYC--RDEIESVKELKDTGKDAVNCTYKN 685
Query: 693 LDNQLFFFLVEDDARGTVVLRV--RPQEKGADHTQAIVLGCVGGIVAVGLGLVLAYRLSV 750
D+ + F +D+ G +L V P+ ++L +G I+ +GL +L ++L +
Sbjct: 686 EDDCVVRFQYYEDSSGKSILYVVEEPECPKGPDILVVLLSVMGAILLIGLAALLIWKLLI 745
Query: 751 EIYDRREYSRFEKEQQQLNWKQDSNPLYKSAITTTIN 787
I+DR+E+++FE+E+ + W +NPLYK A +T N
Sbjct: 746 TIHDRKEFAKFEEERARAKWDTANNPLYKEATSTFTN 782
>gi|9625002 integrin, beta 6 [Homo sapiens]
Length = 788
Score = 567 bits (1462), Expect = e-161
Identities = 305/775 (39%), Positives = 438/775 (56%), Gaps = 26/775 (3%)
Query: 35 RNPHLSMLGSCQPAPSCQKCILSHPSCAWCKQLNFT-ASGEAEARRCARREELLARGCPL 93
RN H+ + A +C+ C+L P CAWC Q NFT SG E RC LLA+GC L
Sbjct: 15 RNDHVQGGCALGGAETCEDCLLIGPQCAWCAQENFTHPSGVGE--RCDTPANLLAKGCQL 72
Query: 94 EELEEPRGQQEVLQDQPLSQGARGEGA--TQLAPQRVRVTLRPGEPQQLQVRFLRAEGYP 151
+E P Q E+L+++PLS G + + Q+APQ + + LRPG Q LQV + E YP
Sbjct: 73 NFIENPVSQVEILKNKPLSVGRQKNSSDIVQIAPQSLILKLRPGGAQTLQVHVRQTEDYP 132
Query: 152 VDLYYLMDLSYSMKDDLERVRQLGHALLVRLQEVTHSVRIGFGSFVDKTVLPFVSTVPSK 211
VDLYYLMDLS SM DDL +++LG L + ++T + R+GFGSFV+K V PFV T P +
Sbjct: 133 VDLYYLMDLSASMDDDLNTIKELGSRLSKEMSKLTSNFRLGFGSFVEKPVSPFVKTTPEE 192
Query: 212 LRHPCPTRLERCQSPFSFHHVLSLTGDAQAFEREVGRQSVSGNLDSPEGGFDAILQAALC 271
+ +PC + C F F H+L LT DA+ F V Q +S N+D+PEGGFDAI+QAA+C
Sbjct: 193 IANPCSSIPYFCLPTFGFKHILPLTNDAERFNEIVKNQKISANIDTPEGGFDAIMQAAVC 252
Query: 272 QEQIGWRNVS-RLLVFTSDDTFHTAGDGKLGGIFMPSDGHCHLDSNGLYSRSTEFDYPSV 330
+E+IGWRN S LLVF SD H D KL GI +P+DG CHLDS YS ST +YP++
Sbjct: 253 KEKIGWRNDSLHLLVFVSDADSHFGMDSKLAGIVIPNDGLCHLDSKNEYSMSTVLEYPTI 312
Query: 331 GQVAQALSAANIQPIFAVTSAALPVYQELSKLIPKSAVGELSEDSSNVVQLIMDAYNSLS 390
GQ+ L N+ IFAVT + +Y+ +KLIP + VG L +DS N++QLI+ AY L
Sbjct: 313 GQLIDKLVQNNVLLIFAVTQEQVHLYENYAKLIPGATVGLLQKDSGNILQLIISAYEELR 372
Query: 391 STVTLEHSSLPPGVHISYESQCEGPEKREGKAEDRGQCNHVRINQTVTFWVSLQATHCLP 450
S V LE G+++S+ + C + + +C+H+++ T +F V++ HC
Sbjct: 373 SEVELEVLGDTEGLNLSFTAICNNGT----LFQHQKKCSHMKVGDTASFSVTVNIPHCER 428
Query: 451 EPHLLRLRALGFSEELIVELHTLCDCNC-SDTQPQAPHCSDGQGHLQCGVCSCAPGRLGR 509
+ ++ +G + L + + C+C+C + + + C G G QCGVC+C PG +G
Sbjct: 429 RSRHIIIKPVGLGDALELLVSPECNCDCQKEVEVNSSKCHHGNGSFQCGVCACHPGHMGP 488
Query: 510 LCECSVAELSSPDLESGCRAPNGTGPLCSGKGHCQCGRCSCS----GQSSGHLCECDDAS 565
CEC LS+ +S AP+ P CSG+G C CG+C C G G C+CD+ S
Sbjct: 489 RCECGEDMLST---DSCKEAPD--HPSCSGRGDCYCGQCICHLSPYGNIYGPYCQCDNFS 543
Query: 566 CERHEGILCGGFGRCQCGVCHCHANRTGRACECSGDMDSCISPEGGLCSGHGRCKCNRCQ 625
C RH+G+LCGG G C CG C C + TG C C+ DSC+S +G LCSG G C C +C
Sbjct: 544 CVRHKGLLCGGNGDCDCGECVCRSGWTGEYCNCTTSTDSCVSEDGVLCSGRGDCVCGKCV 603
Query: 626 CLD-GYYGALCDQCPGCKTPCERHRDCAECGAFRTGPLATNCSTACAHTNVTLA-LAPIL 683
C + G G C++CP C PC R C EC G C C T++
Sbjct: 604 CTNPGASGPTCERCPTCGDPCNSKRSCIECHLSAAGQAREECVDKCKLAGATISEEEDFS 663
Query: 684 DDG--WCKERTLDNQLFFFLVEDDARG-TVVLRVRPQE-KGADHTQAIVLGCVGGIVAVG 739
DG C + + L FL+ D G T++ + ++ + I+LG I+ +G
Sbjct: 664 KDGSVSCSLQGENECLITFLITTDNEGKTIIHSINEKDCPKPPNIPMIMLGVSLAILLIG 723
Query: 740 LGLVLAYRLSVEIYDRREYSRFEKEQQQLNWKQDSNPLYKSAITTTINPRFQEAD 794
+ L+ ++L V +DR+E ++FE E+ + W+ +NPLY+ + +T N ++ +
Sbjct: 724 VVLLCIWKLLVSFHDRKEVAKFEAERSKAKWQTGTNPLYRGSTSTFKNVTYKHRE 778
>gi|20127446 integrin, beta 5 [Homo sapiens]
Length = 799
Score = 560 bits (1443), Expect = e-159
Identities = 305/770 (39%), Positives = 429/770 (55%), Gaps = 31/770 (4%)
Query: 37 PHLSMLGSCQP--APSCQKCILSHPSCAWCKQLNFTASGEAEARRCARREELLARGCPLE 94
P L+ L C A SC++C+L HP CAWC + +F S + RC R L+ GC
Sbjct: 20 PRLAGLNICTSGSATSCEECLLIHPKCAWCSKEDF-GSPRSITSRCDLRANLVKNGCG-G 77
Query: 95 ELEEPRGQQEVLQDQPLSQ---GARGEGATQLAPQRVRVTLRPGEPQQLQVRFLRAEGYP 151
E+E P VL+ PLS G+ G Q+ PQ + V LRPG+ Q++ + E YP
Sbjct: 78 EIESPASSFHVLRSLPLSSKGSGSAGWDVIQMTPQEIAVNLRPGDKTTFQLQVRQVEDYP 137
Query: 152 VDLYYLMDLSYSMKDDLERVRQLGHALLVRLQEVTHSVRIGFGSFVDKTVLPFVSTVPSK 211
VDLYYLMDLS SMKDDL+ +R LG L ++++T + R+GFGSFVDK + PF T P
Sbjct: 138 VDLYYLMDLSLSMKDDLDNIRSLGTKLAEEMRKLTSNFRLGFGSFVDKDISPFSYTAPRY 197
Query: 212 LRHPCP--TRLERCQSPFSFHHVLSLTGDAQAFEREVGRQSVSGNLDSPEGGFDAILQAA 269
+PC C F F H+L LT +F EV +Q VS N D+PEGGFDA+LQAA
Sbjct: 198 QTNPCIGYKLFPNCVPSFGFRHLLPLTDRVDSFNEEVRKQRVSRNRDAPEGGFDAVLQAA 257
Query: 270 LCQEQIGWR-NVSRLLVFTSDDTFHTAGDGKLGGIFMPSDGHCHLDSNGLYSRSTEFDYP 328
+C+E+IGWR + LLVFT+DD H A DGKLGG+ P DG CHL+ Y+ S + DYP
Sbjct: 258 VCKEKIGWRKDALHLLVFTTDDVPHIALDGKLGGLVQPHDGQCHLNEANEYTASNQMDYP 317
Query: 329 SVGQVAQALSAANIQPIFAVTSAALPVYQELSKLIPKSAVGELSEDSSNVVQLIMDAYNS 388
S+ + + L+ NI IFAVT +Y+ + LIP + V L DS N++QLI++AYNS
Sbjct: 318 SLALLGEKLAENNINLIFAVTKNHYMLYKNFTALIPGTTVEILDGDSKNIIQLIINAYNS 377
Query: 389 LSSTVTLEHSSLPPGVHISYESQCEGPEKREGKAEDRGQCNHVRINQTVTFWVSLQATHC 448
+ S V L P +++ + + C+ G+ +C ++I T +F VSL+A C
Sbjct: 378 IRSKVELSVWDQPEDLNLFFTATCQDGVSYPGQR----KCEGLKIGDTASFEVSLEARSC 433
Query: 449 LPE--PHLLRLRALGFSEELIVELHTLCDCNCS-DTQPQAPHCSDGQGHLQCGVCSCAPG 505
H+ LR +GF + L V + C C CS +P + C +G G CG+C C+PG
Sbjct: 434 PSRHTEHVFALRPVGFRDSLEVGVTYNCTCGCSVGLEPNSARC-NGSGTYVCGLCECSPG 492
Query: 506 RLGRLCECSVAELSSPDLESGCRAPNGTGPLCSGKGHCQCGRCSC----SGQSSGHLCEC 561
LG CEC E S ++ CR G PLCSG+G C C +CSC G+ G CEC
Sbjct: 493 YLGTRCECQDGENQSV-YQNLCREAEGK-PLCSGRGDCSCNQCSCFESEFGKIYGPFCEC 550
Query: 562 DDASCERHEGILCGGFGRCQCGVCHCHANRTGRACECSGDMDSCISPEGGLCSGHGRCKC 621
D+ SC R++G+LC G G C CG C CHA G C CS D+ +C +G +CS G C C
Sbjct: 551 DNFSCARNKGVLCSGHGECHCGECKCHAGYIGDNCNCSTDISTCRGRDGQICSERGHCLC 610
Query: 622 NRCQCLD-GYYGALCDQCPGCKTPCERHRDCAECGAFRTG-PLATNCSTACAHTNVTLAL 679
+CQC + G +G +C++CP C C RDC EC +G P C + C +T
Sbjct: 611 GQCQCTEPGAFGEMCEKCPTCPDACSTKRDCVECLLLHSGKPDNQTCHSLCRDEVITWVD 670
Query: 680 APILDDG---WCKERTLDN--QLFFFLVEDDARGTVVLRVRPQEKGADHTQAIVLGCVGG 734
+ DD C +T + +F ++ + + + P+ + I+L VG
Sbjct: 671 TIVKDDQEAVLCFYKTAKDCVMMFTYVELPSGKSNLTVLREPECGNTPNAMTILLAVVGS 730
Query: 735 IVAVGLGLVLAYRLSVEIYDRREYSRFEKEQQQLNWKQDSNPLYKSAITT 784
I+ VGL L+ ++L V I+DRRE+++F+ E+ + ++ SNPLY+ I+T
Sbjct: 731 ILLVGLALLAIWKLLVTIHDRREFAKFQSERSRARYEMASNPLYRKPIST 780
>gi|4504779 integrin, beta 8 precursor [Homo sapiens]
Length = 769
Score = 403 bits (1035), Expect = e-112
Identities = 219/635 (34%), Positives = 336/635 (52%), Gaps = 35/635 (5%)
Query: 48 APSCQKCILSHPSCAWCKQLNFTASGEAEARRCARREELLARGCPLEELEEPRGQQEVLQ 107
A SC +C+ P C WC Q +F SG + + RC L+++GC ++ +E P +
Sbjct: 52 AASCARCLALGPECGWCVQEDFI-SGGSRSERCDIVSNLISKGCSVDSIEYPSVHVIIPT 110
Query: 108 DQPLSQGARGEGATQLAPQRVRVTLRPGEPQQLQVRFLRAEGYPVDLYYLMDLSYSMKDD 167
+ ++ TQ+ P V + LRPG ++ + YPVDLYYL+D+S SM ++
Sbjct: 111 ENEIN--------TQVTPGEVSIQLRPGAEANFMLKVHPLKKYPVDLYYLVDVSASMHNN 162
Query: 168 LERVRQLGHALLVRLQEVTHSVRIGFGSFVDKTVLPFVSTVPSKLRHPCPTRLERCQSPF 227
+E++ +G+ L ++ + R+GFGS+VDKTV P++S P ++ + C C P
Sbjct: 163 IEKLNSVGNDLSRKMAFFSRDFRLGFGSYVDKTVSPYISIHPERIHNQCSDYNLDCMPPH 222
Query: 228 SFHHVLSLTGDAQAFEREVGRQSVSGNLDSPEGGFDAILQAALCQEQIGWR-NVSRLLVF 286
+ HVLSLT + FE+ V RQ +SGN+D+PEGGFDA+LQAA+C+ IGWR RLL+
Sbjct: 223 GYIHVLSLTENITEFEKAVHRQKISGNIDTPEGGFDAMLQAAVCESHIGWRKEAKRLLLV 282
Query: 287 TSDDTFHTAGDGKLGGIFMPSDGHCHLDSNGLYSRSTEFDYPSVGQVAQALSAANIQPIF 346
+D T H A D KL GI +P+DG+CHL N +Y +ST ++PS+GQ+++ L NI IF
Sbjct: 283 MTDQTSHLALDSKLAGIVVPNDGNCHL-KNNVYVKSTTMEHPSLGQLSEKLIDNNINVIF 341
Query: 347 AVTSAALPVYQELSKLIPKSAVGELSEDSSNVVQLIMDAYNSLSSTVTLEHSSLPPGVHI 406
AV Y++L L+P + GE+ ++N+ L+++AY L S V ++ + G++
Sbjct: 342 AVQGKQFHWYKDLLPLLPGTIAGEIESKAANLNNLVVEAYQKLISEVKVQVENQVQGIYF 401
Query: 407 SYESQCEGPEKREGKAEDRGQCNHVRINQTVTFWVSLQATHC--LPEPHLLRLRALGFSE 464
+ + C ++ G C +V N V F V++ C + ++ +GF+E
Sbjct: 402 NITAICPDGSRKPGME----GCRNVTSNDEVLFNVTVTMKKCDVTGGKNYAIIKPIGFNE 457
Query: 465 ELIVELHTLCDCNCSDTQPQAPHCSDGQGHLQCGVCSCAPGRLGRLCECSVAELSSPDLE 524
+ +H C C C D + C D + L C + C + SS +
Sbjct: 458 TAKIHIHRNCSCQCEDNRGPKGKCVD-ETFLDSKCFQCDENK----CHFDEDQFSSESCK 512
Query: 525 SGCRAPNGTGPLCSGKGHCQCGRCSCS----GQSSGHLCECDDASCERHEGILCGGFGRC 580
S + P+CSG+G C CG+CSC G+ G CE DD SC H G LC G G C
Sbjct: 513 S-----HKDQPVCSGRGVCVCGKCSCHKIKLGKVYGKYCEKDDFSCPYHHGNLCAGHGEC 567
Query: 581 QCGVCHCHANRTGRACEC-SGDMDSCISPEGGLCSGHGRCKCNRCQCLD-GYYGALCDQC 638
+ G C C + G C+C S C++ +G +CSG G C C RC+C D G C+ C
Sbjct: 568 EAGRCQCFSGWEGDRCQCPSAAAQHCVNSKGQVCSGRGTCVCGRCECTDPRSIGRFCEHC 627
Query: 639 PGCKTPCERHRDCAEC--GAFRTGPLATNCSTACA 671
P C T C+ + +C +C + + C T+CA
Sbjct: 628 PTCYTACKENWNCMQCLHPHNLSQAILDQCKTSCA 662
>gi|54607027 integrin beta 4 isoform 2 precursor [Homo sapiens]
Length = 1805
Score = 387 bits (995), Expect = e-107
Identities = 230/643 (35%), Positives = 327/643 (50%), Gaps = 48/643 (7%)
Query: 40 SMLGSCQPAP--SCQKCILSHPSCAWCKQLNFTASGEAEARRCARREELLARGCPLEELE 97
++ C+ AP SC +C+ CA+C F RRC + ELLA GC E +
Sbjct: 25 TLANRCKKAPVKSCTECVRVDKDCAYCTDEMF------RDRRCNTQAELLAAGCQRESIV 78
Query: 98 EPRGQQEVLQDQPLSQGARGEGATQLAPQRVRVTLRPGEPQQLQVRFLRAEGYPVDLYYL 157
++ ++ + R +Q++PQ +RV LRPGE + ++ PVDLY L
Sbjct: 79 VMESSFQITEETQIDTTLR---RSQMSPQGLRVRLRPGEERHFELEVFEPLESPVDLYIL 135
Query: 158 MDLSYSMKDDLERVRQLGHALLVRLQEVTHSVRIGFGSFVDKTVLPFVSTVPSKLRHPCP 217
MD S SM DDL+ ++++G L L ++T IGFG FVDK +P P KL+ P P
Sbjct: 136 MDFSNSMSDDLDNLKKMGQNLARVLSQLTSDYTIGFGKFVDKVSVPQTDMRPEKLKEPWP 195
Query: 218 TRLERCQSPFSFHHVLSLTGDAQAFEREVGRQSVSGNLDSPEGGFDAILQAALCQEQIGW 277
PFSF +V+SLT D F ++ + +SGNLD+PEGGFDAILQ A+C IGW
Sbjct: 196 NS----DPPFSFKNVISLTEDVDEFRNKLQGERISGNLDAPEGGFDAILQTAVCTRDIGW 251
Query: 278 R-NVSRLLVFTSDDTFHTAGDGK--LGGIFMPSDGHCHLDSNGLYSRSTEFDYPSVGQVA 334
R + + LLVF+++ FH DG L GI +D CHLD+ G Y++ DYPSV +
Sbjct: 252 RPDSTHLLVFSTESAFHYEADGANVLAGIMSRNDERCHLDTTGTYTQYRTQDYPSVPTLV 311
Query: 335 QALSAANIQPIFAVTSAALPVYQELSKLIPKSAVGELSEDSSNVVQLIMDAYNSLSSTVT 394
+ L+ NI PIFAVT+ + Y++L P S++G L EDSSN+V+L+ +A+N + S +
Sbjct: 312 RLLAKHNIIPIFAVTNYSYSYYEKLHTYFPVSSLGVLQEDSSNIVELLEEAFNRIRSNLD 371
Query: 395 LEHSSLPPGVHISYESQCEGPEKREGKAEDRGQCNHVRINQTVTFWVSLQATHCLPEPHL 454
+ P G+ S+ + R H+R + + V L+A + H+
Sbjct: 372 IRALDSPRGLRTEVTSKM--------FQKTRTGSFHIRRGEVGIYQVQLRALEHVDGTHV 423
Query: 455 LRL---------RALGFSEELIVELHTLCD-CNCS-DTQPQAPHCSDGQGHLQCGVCSCA 503
+L FS+ L ++ +CD C C + ++ CS G CG C C+
Sbjct: 424 CQLPEDQKGNIHLKPSFSDGLKMDAGIICDVCTCELQKEVRSARCS-FNGDFVCGQCVCS 482
Query: 504 PGRLGRLCECSVAELSSPDLESGCRAPNGTGPLCSGKGHCQCGRCSCSGQS--SGHLCEC 561
G G+ C CS LS D++ R G CSG+G CQCG C C G+ G CE
Sbjct: 483 EGWSGQTCNCSTGSLS--DIQPCLR--EGEDKPCSGRGECQCGHCVCYGEGRYEGQFCEY 538
Query: 562 DDASCERHEGILCGGFGRCQCGVCHCHANRTGRACECSGDMDSCISPEGGLCSGHGRCKC 621
D+ C R G LC GRC G C C TG +C+C +CI GG+C+G G C+C
Sbjct: 539 DNFQCPRTSGFLCNDRGRCSMGQCVCEPGWTGPSCDCPLSNATCIDSNGGICNGRGHCEC 598
Query: 622 NRCQCLDG--YYGALCDQCPGCKTP--CERHRDCAECGAFRTG 660
RC C Y +C+ P CE R C +C A+ TG
Sbjct: 599 GRCHCHQQSLYTDTICEINYSAIHPGLCEDLRSCVQCQAWGTG 641
>gi|54607035 integrin beta 4 isoform 1 precursor [Homo sapiens]
Length = 1822
Score = 387 bits (995), Expect = e-107
Identities = 230/643 (35%), Positives = 327/643 (50%), Gaps = 48/643 (7%)
Query: 40 SMLGSCQPAP--SCQKCILSHPSCAWCKQLNFTASGEAEARRCARREELLARGCPLEELE 97
++ C+ AP SC +C+ CA+C F RRC + ELLA GC E +
Sbjct: 25 TLANRCKKAPVKSCTECVRVDKDCAYCTDEMF------RDRRCNTQAELLAAGCQRESIV 78
Query: 98 EPRGQQEVLQDQPLSQGARGEGATQLAPQRVRVTLRPGEPQQLQVRFLRAEGYPVDLYYL 157
++ ++ + R +Q++PQ +RV LRPGE + ++ PVDLY L
Sbjct: 79 VMESSFQITEETQIDTTLR---RSQMSPQGLRVRLRPGEERHFELEVFEPLESPVDLYIL 135
Query: 158 MDLSYSMKDDLERVRQLGHALLVRLQEVTHSVRIGFGSFVDKTVLPFVSTVPSKLRHPCP 217
MD S SM DDL+ ++++G L L ++T IGFG FVDK +P P KL+ P P
Sbjct: 136 MDFSNSMSDDLDNLKKMGQNLARVLSQLTSDYTIGFGKFVDKVSVPQTDMRPEKLKEPWP 195
Query: 218 TRLERCQSPFSFHHVLSLTGDAQAFEREVGRQSVSGNLDSPEGGFDAILQAALCQEQIGW 277
PFSF +V+SLT D F ++ + +SGNLD+PEGGFDAILQ A+C IGW
Sbjct: 196 NS----DPPFSFKNVISLTEDVDEFRNKLQGERISGNLDAPEGGFDAILQTAVCTRDIGW 251
Query: 278 R-NVSRLLVFTSDDTFHTAGDGK--LGGIFMPSDGHCHLDSNGLYSRSTEFDYPSVGQVA 334
R + + LLVF+++ FH DG L GI +D CHLD+ G Y++ DYPSV +
Sbjct: 252 RPDSTHLLVFSTESAFHYEADGANVLAGIMSRNDERCHLDTTGTYTQYRTQDYPSVPTLV 311
Query: 335 QALSAANIQPIFAVTSAALPVYQELSKLIPKSAVGELSEDSSNVVQLIMDAYNSLSSTVT 394
+ L+ NI PIFAVT+ + Y++L P S++G L EDSSN+V+L+ +A+N + S +
Sbjct: 312 RLLAKHNIIPIFAVTNYSYSYYEKLHTYFPVSSLGVLQEDSSNIVELLEEAFNRIRSNLD 371
Query: 395 LEHSSLPPGVHISYESQCEGPEKREGKAEDRGQCNHVRINQTVTFWVSLQATHCLPEPHL 454
+ P G+ S+ + R H+R + + V L+A + H+
Sbjct: 372 IRALDSPRGLRTEVTSKM--------FQKTRTGSFHIRRGEVGIYQVQLRALEHVDGTHV 423
Query: 455 LRL---------RALGFSEELIVELHTLCD-CNCS-DTQPQAPHCSDGQGHLQCGVCSCA 503
+L FS+ L ++ +CD C C + ++ CS G CG C C+
Sbjct: 424 CQLPEDQKGNIHLKPSFSDGLKMDAGIICDVCTCELQKEVRSARCS-FNGDFVCGQCVCS 482
Query: 504 PGRLGRLCECSVAELSSPDLESGCRAPNGTGPLCSGKGHCQCGRCSCSGQS--SGHLCEC 561
G G+ C CS LS D++ R G CSG+G CQCG C C G+ G CE
Sbjct: 483 EGWSGQTCNCSTGSLS--DIQPCLR--EGEDKPCSGRGECQCGHCVCYGEGRYEGQFCEY 538
Query: 562 DDASCERHEGILCGGFGRCQCGVCHCHANRTGRACECSGDMDSCISPEGGLCSGHGRCKC 621
D+ C R G LC GRC G C C TG +C+C +CI GG+C+G G C+C
Sbjct: 539 DNFQCPRTSGFLCNDRGRCSMGQCVCEPGWTGPSCDCPLSNATCIDSNGGICNGRGHCEC 598
Query: 622 NRCQCLDG--YYGALCDQCPGCKTP--CERHRDCAECGAFRTG 660
RC C Y +C+ P CE R C +C A+ TG
Sbjct: 599 GRCHCHQQSLYTDTICEINYSAIHPGLCEDLRSCVQCQAWGTG 641
>gi|54607033 integrin beta 4 isoform 3 precursor [Homo sapiens]
Length = 1752
Score = 387 bits (995), Expect = e-107
Identities = 230/643 (35%), Positives = 327/643 (50%), Gaps = 48/643 (7%)
Query: 40 SMLGSCQPAP--SCQKCILSHPSCAWCKQLNFTASGEAEARRCARREELLARGCPLEELE 97
++ C+ AP SC +C+ CA+C F RRC + ELLA GC E +
Sbjct: 25 TLANRCKKAPVKSCTECVRVDKDCAYCTDEMF------RDRRCNTQAELLAAGCQRESIV 78
Query: 98 EPRGQQEVLQDQPLSQGARGEGATQLAPQRVRVTLRPGEPQQLQVRFLRAEGYPVDLYYL 157
++ ++ + R +Q++PQ +RV LRPGE + ++ PVDLY L
Sbjct: 79 VMESSFQITEETQIDTTLR---RSQMSPQGLRVRLRPGEERHFELEVFEPLESPVDLYIL 135
Query: 158 MDLSYSMKDDLERVRQLGHALLVRLQEVTHSVRIGFGSFVDKTVLPFVSTVPSKLRHPCP 217
MD S SM DDL+ ++++G L L ++T IGFG FVDK +P P KL+ P P
Sbjct: 136 MDFSNSMSDDLDNLKKMGQNLARVLSQLTSDYTIGFGKFVDKVSVPQTDMRPEKLKEPWP 195
Query: 218 TRLERCQSPFSFHHVLSLTGDAQAFEREVGRQSVSGNLDSPEGGFDAILQAALCQEQIGW 277
PFSF +V+SLT D F ++ + +SGNLD+PEGGFDAILQ A+C IGW
Sbjct: 196 NS----DPPFSFKNVISLTEDVDEFRNKLQGERISGNLDAPEGGFDAILQTAVCTRDIGW 251
Query: 278 R-NVSRLLVFTSDDTFHTAGDGK--LGGIFMPSDGHCHLDSNGLYSRSTEFDYPSVGQVA 334
R + + LLVF+++ FH DG L GI +D CHLD+ G Y++ DYPSV +
Sbjct: 252 RPDSTHLLVFSTESAFHYEADGANVLAGIMSRNDERCHLDTTGTYTQYRTQDYPSVPTLV 311
Query: 335 QALSAANIQPIFAVTSAALPVYQELSKLIPKSAVGELSEDSSNVVQLIMDAYNSLSSTVT 394
+ L+ NI PIFAVT+ + Y++L P S++G L EDSSN+V+L+ +A+N + S +
Sbjct: 312 RLLAKHNIIPIFAVTNYSYSYYEKLHTYFPVSSLGVLQEDSSNIVELLEEAFNRIRSNLD 371
Query: 395 LEHSSLPPGVHISYESQCEGPEKREGKAEDRGQCNHVRINQTVTFWVSLQATHCLPEPHL 454
+ P G+ S+ + R H+R + + V L+A + H+
Sbjct: 372 IRALDSPRGLRTEVTSKM--------FQKTRTGSFHIRRGEVGIYQVQLRALEHVDGTHV 423
Query: 455 LRL---------RALGFSEELIVELHTLCD-CNCS-DTQPQAPHCSDGQGHLQCGVCSCA 503
+L FS+ L ++ +CD C C + ++ CS G CG C C+
Sbjct: 424 CQLPEDQKGNIHLKPSFSDGLKMDAGIICDVCTCELQKEVRSARCS-FNGDFVCGQCVCS 482
Query: 504 PGRLGRLCECSVAELSSPDLESGCRAPNGTGPLCSGKGHCQCGRCSCSGQS--SGHLCEC 561
G G+ C CS LS D++ R G CSG+G CQCG C C G+ G CE
Sbjct: 483 EGWSGQTCNCSTGSLS--DIQPCLR--EGEDKPCSGRGECQCGHCVCYGEGRYEGQFCEY 538
Query: 562 DDASCERHEGILCGGFGRCQCGVCHCHANRTGRACECSGDMDSCISPEGGLCSGHGRCKC 621
D+ C R G LC GRC G C C TG +C+C +CI GG+C+G G C+C
Sbjct: 539 DNFQCPRTSGFLCNDRGRCSMGQCVCEPGWTGPSCDCPLSNATCIDSNGGICNGRGHCEC 598
Query: 622 NRCQCLDG--YYGALCDQCPGCKTP--CERHRDCAECGAFRTG 660
RC C Y +C+ P CE R C +C A+ TG
Sbjct: 599 GRCHCHQQSLYTDTICEINYSAIHPGLCEDLRSCVQCQAWGTG 641
>gi|4758614 integrin, beta-like 1 (with EGF-like repeat domains)
[Homo sapiens]
Length = 494
Score = 116 bits (290), Expect = 9e-26
Identities = 64/192 (33%), Positives = 88/192 (45%), Gaps = 19/192 (9%)
Query: 474 CDCNCSDTQPQAPHCSD----GQGHLQCGVCSCAPGRLGRLCECSVAELSSPDLESGCRA 529
C+C+ D + SD G G CG C C G G+ CE + + E R
Sbjct: 269 CECDERDCRAVYDRYSDDFCSGHGQCNCGRCDCKAGWYGKKCEHP--QSCTLSAEESIRK 326
Query: 530 PNGTGPL-CSGKGHCQCGRCSCSGQSS----GHLCECDDASCERHEGILCGGFGRCQCGV 584
G+ L CSG+G C+CG+C+C G CECDD CE +G++CGG G C CG
Sbjct: 327 CQGSSDLPCSGRGKCECGKCTCYPPGDRRVYGKTCECDDRRCEDLDGVVCGGHGTCSCGR 386
Query: 585 CHCHANRTGRACE----CS----GDMDSCISPEGGLCSGHGRCKCNRCQCLDGYYGALCD 636
C C G+ C+ C+ + C S +G LCSG G C C +C C + +
Sbjct: 387 CVCERGWFGKLCQHPRKCNMTEEQSKNLCESADGILCSGKGSCHCGKCICSAEEWYISGE 446
Query: 637 QCPGCKTPCERH 648
C C++H
Sbjct: 447 FCDCDDRDCDKH 458
Score = 111 bits (277), Expect = 3e-24
Identities = 67/201 (33%), Positives = 87/201 (43%), Gaps = 26/201 (12%)
Query: 473 LCDCNCSDTQPQAPHCSDGQGHLQCGVCSCAPGRLGRLCECSV-AELSSPDLESGCRAPN 531
LC+C+ + G G CG C C G G C+ +L+ C+ N
Sbjct: 88 LCECHEWVCETYDGSTCAGHGKCDCGKCKCDQGWYGDACQYPTNCDLTKKKSNQMCK--N 145
Query: 532 GTGPLCSGKGHCQCGRCSC-----SGQSSGHLCECDDASCERHEGI-LCGGFGRCQCGVC 585
+CS G C CGRC C SG G CECDD C E +CGG G+C CG C
Sbjct: 146 SQDIICSNAGTCHCGRCKCDNSDGSGLVYGKFCECDDRECIDDETEEICGGHGKCYCGNC 205
Query: 586 HCHANRTGRACECSGDMD------SCISPEGGLCSGHGRCKCNRCQCLD----GYYGAL- 634
+C A G CE D+ C SP+G +CS G C C C C D G +G +
Sbjct: 206 YCKAGWHGDKCEFQCDITPWESKRRCTSPDGKICSNRGTCVCGECTCHDVDPTGDWGDIH 265
Query: 635 -----CDQCPGCKTPCERHRD 650
CD+ C+ +R+ D
Sbjct: 266 GDTCECDE-RDCRAVYDRYSD 285
Score = 108 bits (269), Expect = 3e-23
Identities = 54/136 (39%), Positives = 70/136 (51%), Gaps = 24/136 (17%)
Query: 476 CNCSDTQPQAPHCSD-------GQGHLQCGVCSCAPGRLGRLCE----CSVAELSSPDLE 524
C C D + C D G G CG C C G G+LC+ C++ E S +L
Sbjct: 361 CECDDRR-----CEDLDGVVCGGHGTCSCGRCVCERGWFGKLCQHPRKCNMTEEQSKNL- 414
Query: 525 SGCRAPNGTGPLCSGKGHCQCGRCSCSGQS---SGHLCECDDASCERHEGILCGGFGRCQ 581
C + +G LCSGKG C CG+C CS + SG C+CDD C++H+G++C G G C
Sbjct: 415 --CESADGI--LCSGKGSCHCGKCICSAEEWYISGEFCDCDDRDCDKHDGLICTGNGICS 470
Query: 582 CGVCHCHANRTGRACE 597
CG C C G ACE
Sbjct: 471 CGNCECWDGWNGNACE 486
Score = 107 bits (266), Expect = 6e-23
Identities = 66/242 (27%), Positives = 91/242 (37%), Gaps = 67/242 (27%)
Query: 476 CNCSDTQ---PQAPHCSDGQGHLQCGVCSCAPGRLGRLCECSVAELSSPDLESGCRAPNG 532
C C D + + G G CG C C G G CE +++ + + C +P+G
Sbjct: 178 CECDDRECIDDETEEICGGHGKCYCGNCYCKAGWHGDKCEFQ-CDITPWESKRRCTSPDG 236
Query: 533 TGPLCSGKGHCQCGRCSCS--------GQSSGHLCECDDASC----ERHEGILCGGFGRC 580
+CS +G C CG C+C G G CECD+ C +R+ C G G+C
Sbjct: 237 K--ICSNRGTCVCGECTCHDVDPTGDWGDIHGDTCECDERDCRAVYDRYSDDFCSGHGQC 294
Query: 581 QCGVCHCHANRTGRACE---------------CSGDMD--------------SCISP--- 608
CG C C A G+ CE C G D +C P
Sbjct: 295 NCGRCDCKAGWYGKKCEHPQSCTLSAEESIRKCQGSSDLPCSGRGKCECGKCTCYPPGDR 354
Query: 609 -----------------EGGLCSGHGRCKCNRCQCLDGYYGALCDQCPGCKTPCERHRDC 651
+G +C GHG C C RC C G++G LC C E+ ++
Sbjct: 355 RVYGKTCECDDRRCEDLDGVVCGGHGTCSCGRCVCERGWFGKLCQHPRKCNMTEEQSKNL 414
Query: 652 AE 653
E
Sbjct: 415 CE 416
Score = 103 bits (256), Expect = 8e-22
Identities = 68/197 (34%), Positives = 85/197 (43%), Gaps = 37/197 (18%)
Query: 476 CNCSDTQPQAPHCSDGQGHLQCGVCSC---APGR-LGRLCECSVAELSSPDLESGCRAPN 531
C P A C G+G CGVC C PG G LCEC E C +
Sbjct: 51 CRAPGQPPGAALCH-GRGRCDCGVCICHVTEPGMFFGPLCECH---------EWVCETYD 100
Query: 532 GTGPLCSGKGHCQCGRCSCSGQSSGHLCE----CD------DASCERHEGILCGGFGRCQ 581
G+ C+G G C CG+C C G C+ CD + C+ + I+C G C
Sbjct: 101 GS--TCAGHGKCDCGKCKCDQGWYGDACQYPTNCDLTKKKSNQMCKNSQDIICSNAGTCH 158
Query: 582 CGVCHCHANR-----TGRACECSGDMDSCISPE-GGLCSGHGRCKCNRCQCLDGYYGALC 635
CG C C + G+ CEC D CI E +C GHG+C C C C G++G C
Sbjct: 159 CGRCKCDNSDGSGLVYGKFCEC--DDRECIDDETEEICGGHGKCYCGNCYCKAGWHGDKC 216
Query: 636 D-QCPGCKTPCERHRDC 651
+ QC TP E R C
Sbjct: 217 EFQCD--ITPWESKRRC 231
Score = 95.5 bits (236), Expect = 2e-19
Identities = 60/168 (35%), Positives = 76/168 (45%), Gaps = 28/168 (16%)
Query: 514 SVAELSSPDLESGCRAPNGTGP---LCSGKGHCQCGRCSCS----GQSSGHLCECDDASC 566
+ LS + E CRAP G P LC G+G C CG C C G G LCEC + C
Sbjct: 38 AACRLSRAESERRCRAP-GQPPGAALCHGRGRCDCGVCICHVTEPGMFFGPLCECHEWVC 96
Query: 567 ERHEGILCGGFGRCQCGVCHCHANRTGRACECSGDMD--------SCISPEGGLCSGHGR 618
E ++G C G G+C CG C C G AC+ + D C + + +CS G
Sbjct: 97 ETYDGSTCAGHGKCDCGKCKCDQGWYGDACQYPTNCDLTKKKSNQMCKNSQDIICSNAGT 156
Query: 619 CKCNRCQC--LDG---YYGALCD----QCPGCKTP--CERHRDCAECG 655
C C RC+C DG YG C+ +C +T C H C CG
Sbjct: 157 CHCGRCKCDNSDGSGLVYGKFCECDDRECIDDETEEICGGHGKC-YCG 203
Score = 30.8 bits (68), Expect = 5.2
Identities = 14/39 (35%), Positives = 15/39 (38%)
Query: 474 CDCNCSDTQPQAPHCSDGQGHLQCGVCSCAPGRLGRLCE 512
CDC+ D G G CG C C G G CE
Sbjct: 448 CDCDDRDCDKHDGLICTGNGICSCGNCECWDGWNGNACE 486
>gi|122937400 odz, odd Oz/ten-m homolog 3 [Homo sapiens]
Length = 2699
Score = 89.7 bits (221), Expect = 9e-18
Identities = 66/222 (29%), Positives = 83/222 (37%), Gaps = 42/222 (18%)
Query: 484 QAPHCSDGQGHLQCGVCSCAPGRLGRLCECSVAELSSPDLESGCRAPNGTGPLCSGKGHC 543
+ P G G G C C PG LG C + + LCSG G
Sbjct: 517 ECPRNCHGNGECVSGTCHCFPGFLGPDCSRAACPV-----------------LCSGNGQY 559
Query: 544 QCGRCSCSGQSSGHLCECDDASCERHEGILCGGFGRCQCGVCHCHANRTGRACECSGDMD 603
GRC C G C+ C + CGG G C G C C++ G +CE +
Sbjct: 560 SKGRCLCFSGWKGTECDVPTTQCIDPQ---CGGRGICIMGSCACNSGYKGESCEEA---- 612
Query: 604 SCISPEGGLCSGHGRCKCNRCQCLDGYYGALC--------DQCPGCKTPCERHRDCAECG 655
CI P CS HG C C C G+ G+ C DQC G T + C C
Sbjct: 613 DCIDPG---CSNHGVCIHGECHCSPGWGGSNCEILKTMCPDQCSGHGTYLQESGSCT-CD 668
Query: 656 AFRTGPLATN--CSTACAHTNVTLALAPILDDGW----CKER 691
TGP +N CS C V + ++GW C +R
Sbjct: 669 PNWTGPDCSNEICSVDCGSHGVCMGGTCRCEEGWTGPACNQR 710
Score = 71.2 bits (173), Expect = 3e-12
Identities = 58/198 (29%), Positives = 68/198 (34%), Gaps = 58/198 (29%)
Query: 475 DCNCSDTQPQAPHCSDGQGHLQCGVCSCAPGRLGRLCECSVAELSSPDLESGCRAPNGTG 534
+C+ TQ P C G+G G C+C G G CE E+ C P
Sbjct: 574 ECDVPTTQCIDPQCG-GRGICIMGSCACNSGYKGESCE-----------EADCIDPG--- 618
Query: 535 PLCSGKGHCQCGRCSCSGQSSGHLCE-----CDDASCERHEGIL---------------- 573
CS G C G C CS G CE C D C H L
Sbjct: 619 --CSNHGVCIHGECHCSPGWGGSNCEILKTMCPD-QCSGHGTYLQESGSCTCDPNWTGPD 675
Query: 574 ---------CGGFGRCQCGVCHCHANRTGRACECSGDMDSCISPEGGLCSGHGRCKCNRC 624
CG G C G C C TG AC P C+ HG CK +C
Sbjct: 676 CSNEICSVDCGSHGVCMGGTCRCEEGWTGPACN-----QRACHPR---CAEHGTCKDGKC 727
Query: 625 QCLDGYYGALC--DQCPG 640
+C G+ G C + CPG
Sbjct: 728 ECSQGWNGEHCTIEGCPG 745
Score = 67.8 bits (164), Expect = 4e-11
Identities = 60/196 (30%), Positives = 75/196 (38%), Gaps = 52/196 (26%)
Query: 474 CDCN-------CSDTQPQAPHCSDGQGHLQC--GVCSCAPGRLGRLCECSVAELSSPDLE 524
C CN C + P CS+ H C G C C+PG G CE + + PD
Sbjct: 598 CACNSGYKGESCEEADCIDPGCSN---HGVCIHGECHCSPGWGGSNCE--ILKTMCPDQC 652
Query: 525 SG----------CRA-PNGTGPLCSGK---------GHCQCGRCSCSGQSSGHLCECDDA 564
SG C PN TGP CS + G C G C C +G C +
Sbjct: 653 SGHGTYLQESGSCTCDPNWTGPDCSNEICSVDCGSHGVCMGGTCRCEEGWTGPAC--NQR 710
Query: 565 SCERHEGILCGGFGRCQCGVCHCHANRTGRACECSGDMDSCISPEGGLCSGHGRCKCNR- 623
+C C G C+ G C C G C G C GLC+ +GRC ++
Sbjct: 711 ACHPR----CAEHGTCKDGKCECSQGWNGEHCTIEG----C----PGLCNSNGRCTLDQN 758
Query: 624 ---CQCLDGYYGALCD 636
C C G+ GA CD
Sbjct: 759 GWHCVCQPGWRGAGCD 774
>gi|188528648 tenascin XB isoform 1 precursor [Homo sapiens]
Length = 4242
Score = 85.1 bits (209), Expect = 2e-16
Identities = 80/272 (29%), Positives = 102/272 (37%), Gaps = 60/272 (22%)
Query: 412 CEGPEKREGKAEDRGQCNHVRINQTVTFWVSLQATHCLPEPHLLRLRALGFSEELIVELH 471
C G + G+ ED G+C W T C R G E +
Sbjct: 404 CPGDCNQRGRCED-GRC---------VCWPGYTGTDCGSRACPRDCRGRGRCE------N 447
Query: 472 TLCDCNCSDTQPQA-----PHCSDGQGHLQCGVCSCAPGRLGRLCECSVAELSSPDLESG 526
+C CN + P G+G + G C C PG GR C G
Sbjct: 448 GVCVCNAGYSGEDCGVRSCPGDCRGRGRCESGRCMCWPGYTGRDC--------------G 493
Query: 527 CRAPNGTGPLCSGKGHCQCGRCSCSGQSSGHLCECDDASCERHEGILCGGFGRCQCGVCH 586
RA G C G+G C GRC C+ +G +C C C G G C+ GVC
Sbjct: 494 TRACPGD---CRGRGRCVDGRCVCNPGFTGE--DCGSRRCPGD----CRGHGLCEDGVCV 544
Query: 587 CHANRTGRACECSGDMDSCISPEGGLCSGHGRCKCNRCQCLDGYYGALCD--QCPGCKTP 644
C A +G C S S GG C G G+C RC C DGY G C QCP
Sbjct: 545 CDAGYSGEDC-------STRSCPGG-CRGRGQCLDGRCVCEDGYSGEDCGVRQCP---ND 593
Query: 645 CERHRDCAE--CGAFRTGPLATNCSTACAHTN 674
C +H C + C + G ++ +CS +N
Sbjct: 594 CSQHGVCQDGVCICWE-GYVSEDCSIRTCPSN 624
Score = 78.2 bits (191), Expect = 3e-14
Identities = 53/160 (33%), Positives = 66/160 (41%), Gaps = 39/160 (24%)
Query: 486 PHCSDGQGHLQCGVCSCAPGRLGRLCECSVAELSSPDLESGCRAPNGTGPLCSGKGHCQC 545
P G+G + G C C G G C G R+ G C+ +G C+
Sbjct: 374 PRDCRGRGRCEDGECICDTGYSGDDC--------------GVRSCPGD---CNQRGRCED 416
Query: 546 GRCSCSGQSSGHLCECDDASCERHEGILCGGFGRCQCGVCHCHANRTGRAC---ECSGDM 602
GRC C +G +C +C R C G GRC+ GVC C+A +G C C GD
Sbjct: 417 GRCVCWPGYTG--TDCGSRACPRD----CRGRGRCENGVCVCNAGYSGEDCGVRSCPGD- 469
Query: 603 DSCISPEGGLCSGHGRCKCNRCQCLDGYYGALCD--QCPG 640
C G GRC+ RC C GY G C CPG
Sbjct: 470 ----------CRGRGRCESGRCMCWPGYTGRDCGTRACPG 499
Score = 74.7 bits (182), Expect = 3e-13
Identities = 60/175 (34%), Positives = 69/175 (39%), Gaps = 42/175 (24%)
Query: 483 PQAPHCSDGQGHLQCGVCSCAPGRLGRLCECSVAELSSPDLESGCRAPNGTGPLCSGKGH 542
P P G+G GVC C G G C + C P G CS +G
Sbjct: 216 PSCPGDCQGRGRCVQGVCVCRAGFSGPDCS-----------QRSC--PRG----CSQRGR 258
Query: 543 CQCGRCSCSGQSSGHLCECDDASCERHEGILCGGFGRCQCGVCHCHANRTGRACECSGDM 602
C+ GRC C +G +C SC R C GRC+ G C C+ TG C +
Sbjct: 259 CEGGRCVCDPGYTGD--DCGMRSCPRG----CSQRGRCENGRCVCNPGYTGEDC----GV 308
Query: 603 DSCISPEGGLCSGHGRCKCNRCQCLDGYYGALCD--QCPGCKTPCERHRDCAECG 655
SC P G CS GRCK RC C GY G C CP DC E G
Sbjct: 309 RSC--PRG--CSQRGRCKDGRCVCDPGYTGEDCGTRSCPW---------DCGEGG 350
Score = 67.4 bits (163), Expect = 5e-11
Identities = 62/204 (30%), Positives = 73/204 (35%), Gaps = 60/204 (29%)
Query: 488 CSDGQGHLQCGVCSCAPGRLGRLCECSVAELSSPDLESGCRA-PNGTGPLCSGKGHCQCG 546
CS +G + G C C PG G C G R+ P G CS +G C+ G
Sbjct: 284 CSQ-RGRCENGRCVCNPGYTGEDC--------------GVRSCPRG----CSQRGRCKDG 324
Query: 547 RCSCSGQSSGHLCECDDASCERHEGILCGGFGRCQCGVCHCHANRTGRAC-------ECS 599
RC C +G +C SC CG GRC G C C TG C +C
Sbjct: 325 RCVCDPGYTGE--DCGTRSCPWD----CGEGGRCVDGRCVCWPGYTGEDCSTRTCPRDCR 378
Query: 600 G----DMDSCISPEG------------GLCSGHGRCKCNRCQCLDGYYGALCDQ--CPGC 641
G + CI G G C+ GRC+ RC C GY G C CP
Sbjct: 379 GRGRCEDGECICDTGYSGDDCGVRSCPGDCNQRGRCEDGRCVCWPGYTGTDCGSRACP-- 436
Query: 642 KTPCERHRDCAECGAFRTGPLATN 665
RDC G G N
Sbjct: 437 -------RDCRGRGRCENGVCVCN 453
Score = 66.2 bits (160), Expect = 1e-10
Identities = 57/186 (30%), Positives = 67/186 (36%), Gaps = 50/186 (26%)
Query: 481 TQPQAPHCSDGQGHLQCGVCSCAPGRLGRLCECSVAELSSPDLESGCRA-PNGTGPLCSG 539
+Q P +G + G C C PG G C G R+ P G CS
Sbjct: 245 SQRSCPRGCSQRGRCEGGRCVCDPGYTGDDC--------------GMRSCPRG----CSQ 286
Query: 540 KGHCQCGRCSCSGQSSGHLCECDDASCERHEGILCGGFGRCQCGVCHCHANRTGRAC--- 596
+G C+ GRC C+ +G +C SC R C GRC+ G C C TG C
Sbjct: 287 RGRCENGRCVCNPGYTGE--DCGVRSCPRG----CSQRGRCKDGRCVCDPGYTGEDCGTR 340
Query: 597 ECSGDMDSCISPEGGLCSGHGRCKCNRCQCLDGYYGALCD--QCPGCKTPCERHRDCAEC 654
C D C GRC RC C GY G C CP RDC
Sbjct: 341 SCPWD-----------CGEGGRCVDGRCVCWPGYTGEDCSTRTCP---------RDCRGR 380
Query: 655 GAFRTG 660
G G
Sbjct: 381 GRCEDG 386
Score = 65.9 bits (159), Expect = 1e-10
Identities = 51/182 (28%), Positives = 61/182 (33%), Gaps = 51/182 (28%)
Query: 484 QAPHCSDGQGHLQCGVCSCAPGRLGRLCECSVAELSSPDLESGCRAPNGTGPLCSGKGHC 543
Q P+ G Q GVC C G + +CS+ S C G+G C
Sbjct: 589 QCPNDCSQHGVCQDGVCICWEGYVSE--DCSIRTCPSN---------------CHGRGRC 631
Query: 544 QCGRCSCSGQSSGHLCECDDASCERHEGILCGGFGRCQCGVCHCHANRTGRAC------- 596
+ GRC C +G C + C G GRC GVC CH G C
Sbjct: 632 EEGRCLCDPGYTGPTCATRMCPAD------CRGRGRCVQGVCLCHVGYGGEDCGQEEPPA 685
Query: 597 -ECSGDMD--------SCISPEG------------GLCSGHGRCKCNRCQCLDGYYGALC 635
C G C+ EG G C G G C C C DGY G C
Sbjct: 686 SACPGGCGPRELCRAGQCVCVEGFRGPDCAIQTCPGDCRGRGECHDGSCVCKDGYAGEDC 745
Query: 636 DQ 637
+
Sbjct: 746 GE 747
Score = 42.7 bits (99), Expect = 0.001
Identities = 48/180 (26%), Positives = 60/180 (33%), Gaps = 41/180 (22%)
Query: 525 SGCRAPNGTGP-------------------LCSG-KGHCQCGRCSCSGQSSGHLCECDDA 564
+GC P GT P L G K C G C S Q+ +
Sbjct: 83 TGCGCPPGTEPPVLASEVQALRVRLEILEELVKGLKEQCTGGCCPASAQAGTGQTDVRTL 142
Query: 565 SCERHEGILCGGFGRCQCGVCHCHANRTGRACECSGDMD----SCISPEGGL---CSGHG 617
C H G F +C C C G C D + S S G C+ G
Sbjct: 143 -CSLH-----GVFDLSRC-TCSCEPGWGGPTCSDPTDAEIPPSSPPSASGSCPDDCNDQG 195
Query: 618 RCKCNRCQCLDGYYGALCDQCPGCKTPCERHRDCAE----CGAFRTGPLAT--NCSTACA 671
RC RC C GY G C P C C+ C + C A +GP + +C C+
Sbjct: 196 RCVRGRCVCFPGYTGPSCG-WPSCPGDCQGRGRCVQGVCVCRAGFSGPDCSQRSCPRGCS 254
>gi|169790825 odz, odd Oz/ten-m homolog 4 [Homo sapiens]
Length = 2769
Score = 82.0 bits (201), Expect = 2e-15
Identities = 59/184 (32%), Positives = 70/184 (38%), Gaps = 38/184 (20%)
Query: 475 DCNCSDTQPQAPHCSDGQGHLQCGVCSCAPGRLGRLCECSVAELSSPDLESGCRAPNGTG 534
+C+ Q CS+ G G C C PG G CE E C P
Sbjct: 622 ECDVPTNQCIDVACSN-HGTCITGTCICNPGYKGESCE-----------EVDCMDPT--- 666
Query: 535 PLCSGKGHCQCGRCSCSGQSSGHLCECDDASCERHEGILCGGFGRC--QCGVCHCHANRT 592
CSG+G C G C CS G CE A+C C G G G+C C + T
Sbjct: 667 --CSGRGVCVRGECHCSVGWGGTNCETPRATCLDQ----CSGHGTFLPDTGLCSCDPSWT 720
Query: 593 GRACE---CSGDMDSCISPEGGLCSGHGRCKCNRCQCLDGYYGALCDQCPGCKTPCERHR 649
G C C+ D C GHG C C+C DG+ GA CDQ C C H
Sbjct: 721 GHDCSIEICAAD-----------CGGHGVCVGGTCRCEDGWMGAACDQ-RACHPRCAEHG 768
Query: 650 DCAE 653
C +
Sbjct: 769 TCRD 772
Score = 70.5 bits (171), Expect = 6e-12
Identities = 63/208 (30%), Positives = 78/208 (37%), Gaps = 41/208 (19%)
Query: 474 CDCN-------CSDTQPQAPHCSDGQGHLQCGVCSCAPGRLGRLCE---------CSVAE 517
C CN C + P CS G+G G C C+ G G CE CS
Sbjct: 646 CICNPGYKGESCEEVDCMDPTCS-GRGVCVRGECHCSVGWGGTNCETPRATCLDQCSGHG 704
Query: 518 LSSPDLESGCRAPNGTGPLCS---------GKGHCQCGRCSCSGQSSGHLCECDDASCER 568
PD P+ TG CS G G C G C C G CD +C
Sbjct: 705 TFLPDTGLCSCDPSWTGHDCSIEICAADCGGHGVCVGGTCRCEDGWMG--AACDQRACHP 762
Query: 569 HEGILCGGFGRCQCGVCHCHANRTGRACECSGDMDSCISPEG--GLCSGHGRCKCN---- 622
C G C+ G C C G C + +D + EG GLC+G+GRC +
Sbjct: 763 R----CAEHGTCRDGKCECSPGWNGEHCTIAHYLDRVVK-EGCPGLCNGNGRCTLDLNGW 817
Query: 623 RCQCLDGYYGALCDQCPGCKTPCERHRD 650
C C G+ GA CD +T C +D
Sbjct: 818 HCVCQLGWRGAGCD--TSMETACGDSKD 843
Score = 66.2 bits (160), Expect = 1e-10
Identities = 57/190 (30%), Positives = 72/190 (37%), Gaps = 20/190 (10%)
Query: 481 TQPQAPHCSDGQGHLQCGVCSCAPGRLGRLCECSVAELSSPDLESGCRAPNGTGPLCSGK 540
T P + H + +L G+ A G+ E V + +ES P+ C G
Sbjct: 520 TVPPSSHETGFIQYLDSGIWHLAFYNDGK--ESEVVSFLTTAIESVDNCPSN----CYGN 573
Query: 541 GHCQCGRCSCSGQSSGHLCECDDASCERHEGILCGGFGRCQCGVCHCHANRTGRACECSG 600
G C G C C G +C ASC +LC G G+ G C CH+ G EC
Sbjct: 574 GDCISGTCHCFLGFLGP--DCGRASCP----VLCSGNGQYMKGRCLCHSGWKG--AECDV 625
Query: 601 DMDSCISPEGGLCSGHGRCKCNRCQCLDGYYGALCDQCPGCKTPCERHRDC--AECGAFR 658
+ CI CS HG C C C GY G C++ C C EC
Sbjct: 626 PTNQCIDV---ACSNHGTCITGTCICNPGYKGESCEEVDCMDPTCSGRGVCVRGECHC-S 681
Query: 659 TGPLATNCST 668
G TNC T
Sbjct: 682 VGWGGTNCET 691
>gi|110347400 odz, odd Oz/ten-m homolog 1 isoform 3 [Homo sapiens]
Length = 2725
Score = 80.5 bits (197), Expect = 6e-15
Identities = 55/181 (30%), Positives = 68/181 (37%), Gaps = 32/181 (17%)
Query: 475 DCNCSDTQPQAPHCSDGQGHLQCGVCSCAPGRLGRLCECSVAELSSPDLESGCRAPNGTG 534
+C+ + Q P C G G GVC C PG G +CE E C
Sbjct: 588 ECDVPEEQCIDPTCF-GHGTCIMGVCICVPGYKGEICE-----------EEDC-----LD 630
Query: 535 PLCSGKGHCQCGRCSCSGQSSGHLCECDDASCERHEGILCGGFGR--CQCGVCHCHANRT 592
P+CS G C G C CS G CE C+ C G G GVC C T
Sbjct: 631 PMCSNHGICVKGECHCSTGWGGVNCETPLPVCQEQ----CSGHGTFLLDAGVCSCDPKWT 686
Query: 593 GRACECSGDMDSCISPEGGLCSGHGRCKCNRCQCLDGYYGALCDQCPGCKTPCERHRDCA 652
G C + C C HG C CQC +G+ G C++ C + C H C
Sbjct: 687 GSDCST----ELCTME----CGSHGVCSRGICQCEEGWVGPTCEE-RSCHSHCTEHGQCK 737
Query: 653 E 653
+
Sbjct: 738 D 738
Score = 75.9 bits (185), Expect = 1e-13
Identities = 63/238 (26%), Positives = 82/238 (34%), Gaps = 51/238 (21%)
Query: 468 VELHTLCDCNCSDTQPQAPHCSDGQGHLQCGVCSCAPGRLGRLCECSVAELSSPDLESGC 527
+E+ C NC+ G G G C C PG LG C
Sbjct: 526 IEIMDDCSTNCN-----------GNGECISGHCHCFPGFLGPDC---------------- 558
Query: 528 RAPNGTGPLCSGKGHCQCGRCSCSGQSSGHLCECDDASCERHEGILCGGFGRCQCGVCHC 587
A + LC G G + G C C G C+ + C C G G C GVC C
Sbjct: 559 -ARDSCPVLCGGNGEYEKGHCVCRHGWKGPECDVPEEQC---IDPTCFGHGTCIMGVCIC 614
Query: 588 HANRTGRACECSGDMDSCISPEGGLCSGHGRCKCNRCQCLDGYYGALCD-QCPGCKTPCE 646
G CE + C+ P +CS HG C C C G+ G C+ P C+ C
Sbjct: 615 VPGYKGEICE----EEDCLDP---MCSNHGICVKGECHCSTGWGGVNCETPLPVCQEQCS 667
Query: 647 RHRD-CAECGAFRTGPLATN-------CSTACAHTNVTLALAPILDDGW----CKERT 692
H + G P T C+ C V ++GW C+ER+
Sbjct: 668 GHGTFLLDAGVCSCDPKWTGSDCSTELCTMECGSHGVCSRGICQCEEGWVGPTCEERS 725
Score = 66.6 bits (161), Expect = 9e-11
Identities = 51/184 (27%), Positives = 70/184 (38%), Gaps = 41/184 (22%)
Query: 471 HTLC---DCNCS------DTQPQAPHCSDG-QGH----LQCGVCSCAPGRLGRLCECSVA 516
H +C +C+CS + + P C + GH L GVCSC P G C +
Sbjct: 636 HGICVKGECHCSTGWGGVNCETPLPVCQEQCSGHGTFLLDAGVCSCDPKWTGSDCSTELC 695
Query: 517 ELSSPDLESGCRAPNGTGPLCSGKGHCQCGRCSCSGQSSGHLCECDDASCERHEGILCGG 576
+ C G C G C C G CE + SC H C
Sbjct: 696 TME-----------------CGSHGVCSRGICQCEEGWVGPTCE--ERSCHSH----CTE 732
Query: 577 FGRCQCGVCHCHANRTGRACECSGDMDSCISPEGGLCSGHGRCKCNR----CQCLDGYYG 632
G+C+ G C C G C + +D+ GLC G+GRC ++ C C G+ G
Sbjct: 733 HGQCKDGKCECSPGWEGDHCTIAHYLDAVRDGCPGLCFGNGRCTLDQNGWHCVCQVGWSG 792
Query: 633 ALCD 636
C+
Sbjct: 793 TGCN 796
>gi|253970446 odz, odd Oz/ten-m homolog 1 isoform 2 [Homo sapiens]
Length = 2731
Score = 80.5 bits (197), Expect = 6e-15
Identities = 55/181 (30%), Positives = 68/181 (37%), Gaps = 32/181 (17%)
Query: 475 DCNCSDTQPQAPHCSDGQGHLQCGVCSCAPGRLGRLCECSVAELSSPDLESGCRAPNGTG 534
+C+ + Q P C G G GVC C PG G +CE E C
Sbjct: 587 ECDVPEEQCIDPTCF-GHGTCIMGVCICVPGYKGEICE-----------EEDC-----LD 629
Query: 535 PLCSGKGHCQCGRCSCSGQSSGHLCECDDASCERHEGILCGGFGR--CQCGVCHCHANRT 592
P+CS G C G C CS G CE C+ C G G GVC C T
Sbjct: 630 PMCSNHGICVKGECHCSTGWGGVNCETPLPVCQEQ----CSGHGTFLLDAGVCSCDPKWT 685
Query: 593 GRACECSGDMDSCISPEGGLCSGHGRCKCNRCQCLDGYYGALCDQCPGCKTPCERHRDCA 652
G C + C C HG C CQC +G+ G C++ C + C H C
Sbjct: 686 GSDCST----ELCTME----CGSHGVCSRGICQCEEGWVGPTCEE-RSCHSHCTEHGQCK 736
Query: 653 E 653
+
Sbjct: 737 D 737
Score = 75.9 bits (185), Expect = 1e-13
Identities = 63/238 (26%), Positives = 82/238 (34%), Gaps = 51/238 (21%)
Query: 468 VELHTLCDCNCSDTQPQAPHCSDGQGHLQCGVCSCAPGRLGRLCECSVAELSSPDLESGC 527
+E+ C NC+ G G G C C PG LG C
Sbjct: 525 IEIMDDCSTNCN-----------GNGECISGHCHCFPGFLGPDC---------------- 557
Query: 528 RAPNGTGPLCSGKGHCQCGRCSCSGQSSGHLCECDDASCERHEGILCGGFGRCQCGVCHC 587
A + LC G G + G C C G C+ + C C G G C GVC C
Sbjct: 558 -ARDSCPVLCGGNGEYEKGHCVCRHGWKGPECDVPEEQC---IDPTCFGHGTCIMGVCIC 613
Query: 588 HANRTGRACECSGDMDSCISPEGGLCSGHGRCKCNRCQCLDGYYGALCD-QCPGCKTPCE 646
G CE + C+ P +CS HG C C C G+ G C+ P C+ C
Sbjct: 614 VPGYKGEICE----EEDCLDP---MCSNHGICVKGECHCSTGWGGVNCETPLPVCQEQCS 666
Query: 647 RHRD-CAECGAFRTGPLATN-------CSTACAHTNVTLALAPILDDGW----CKERT 692
H + G P T C+ C V ++GW C+ER+
Sbjct: 667 GHGTFLLDAGVCSCDPKWTGSDCSTELCTMECGSHGVCSRGICQCEEGWVGPTCEERS 724
Score = 66.6 bits (161), Expect = 9e-11
Identities = 51/184 (27%), Positives = 70/184 (38%), Gaps = 41/184 (22%)
Query: 471 HTLC---DCNCS------DTQPQAPHCSDG-QGH----LQCGVCSCAPGRLGRLCECSVA 516
H +C +C+CS + + P C + GH L GVCSC P G C +
Sbjct: 635 HGICVKGECHCSTGWGGVNCETPLPVCQEQCSGHGTFLLDAGVCSCDPKWTGSDCSTELC 694
Query: 517 ELSSPDLESGCRAPNGTGPLCSGKGHCQCGRCSCSGQSSGHLCECDDASCERHEGILCGG 576
+ C G C G C C G CE + SC H C
Sbjct: 695 TME-----------------CGSHGVCSRGICQCEEGWVGPTCE--ERSCHSH----CTE 731
Query: 577 FGRCQCGVCHCHANRTGRACECSGDMDSCISPEGGLCSGHGRCKCNR----CQCLDGYYG 632
G+C+ G C C G C + +D+ GLC G+GRC ++ C C G+ G
Sbjct: 732 HGQCKDGKCECSPGWEGDHCTIAHYLDAVRDGCPGLCFGNGRCTLDQNGWHCVCQVGWSG 791
Query: 633 ALCD 636
C+
Sbjct: 792 TGCN 795
>gi|253970444 odz, odd Oz/ten-m homolog 1 isoform 1 [Homo sapiens]
Length = 2732
Score = 80.5 bits (197), Expect = 6e-15
Identities = 55/181 (30%), Positives = 68/181 (37%), Gaps = 32/181 (17%)
Query: 475 DCNCSDTQPQAPHCSDGQGHLQCGVCSCAPGRLGRLCECSVAELSSPDLESGCRAPNGTG 534
+C+ + Q P C G G GVC C PG G +CE E C
Sbjct: 588 ECDVPEEQCIDPTCF-GHGTCIMGVCICVPGYKGEICE-----------EEDC-----LD 630
Query: 535 PLCSGKGHCQCGRCSCSGQSSGHLCECDDASCERHEGILCGGFGR--CQCGVCHCHANRT 592
P+CS G C G C CS G CE C+ C G G GVC C T
Sbjct: 631 PMCSNHGICVKGECHCSTGWGGVNCETPLPVCQEQ----CSGHGTFLLDAGVCSCDPKWT 686
Query: 593 GRACECSGDMDSCISPEGGLCSGHGRCKCNRCQCLDGYYGALCDQCPGCKTPCERHRDCA 652
G C + C C HG C CQC +G+ G C++ C + C H C
Sbjct: 687 GSDCST----ELCTME----CGSHGVCSRGICQCEEGWVGPTCEE-RSCHSHCTEHGQCK 737
Query: 653 E 653
+
Sbjct: 738 D 738
Score = 75.9 bits (185), Expect = 1e-13
Identities = 63/238 (26%), Positives = 82/238 (34%), Gaps = 51/238 (21%)
Query: 468 VELHTLCDCNCSDTQPQAPHCSDGQGHLQCGVCSCAPGRLGRLCECSVAELSSPDLESGC 527
+E+ C NC+ G G G C C PG LG C
Sbjct: 526 IEIMDDCSTNCN-----------GNGECISGHCHCFPGFLGPDC---------------- 558
Query: 528 RAPNGTGPLCSGKGHCQCGRCSCSGQSSGHLCECDDASCERHEGILCGGFGRCQCGVCHC 587
A + LC G G + G C C G C+ + C C G G C GVC C
Sbjct: 559 -ARDSCPVLCGGNGEYEKGHCVCRHGWKGPECDVPEEQC---IDPTCFGHGTCIMGVCIC 614
Query: 588 HANRTGRACECSGDMDSCISPEGGLCSGHGRCKCNRCQCLDGYYGALCD-QCPGCKTPCE 646
G CE + C+ P +CS HG C C C G+ G C+ P C+ C
Sbjct: 615 VPGYKGEICE----EEDCLDP---MCSNHGICVKGECHCSTGWGGVNCETPLPVCQEQCS 667
Query: 647 RHRD-CAECGAFRTGPLATN-------CSTACAHTNVTLALAPILDDGW----CKERT 692
H + G P T C+ C V ++GW C+ER+
Sbjct: 668 GHGTFLLDAGVCSCDPKWTGSDCSTELCTMECGSHGVCSRGICQCEEGWVGPTCEERS 725
Score = 66.6 bits (161), Expect = 9e-11
Identities = 51/184 (27%), Positives = 70/184 (38%), Gaps = 41/184 (22%)
Query: 471 HTLC---DCNCS------DTQPQAPHCSDG-QGH----LQCGVCSCAPGRLGRLCECSVA 516
H +C +C+CS + + P C + GH L GVCSC P G C +
Sbjct: 636 HGICVKGECHCSTGWGGVNCETPLPVCQEQCSGHGTFLLDAGVCSCDPKWTGSDCSTELC 695
Query: 517 ELSSPDLESGCRAPNGTGPLCSGKGHCQCGRCSCSGQSSGHLCECDDASCERHEGILCGG 576
+ C G C G C C G CE + SC H C
Sbjct: 696 TME-----------------CGSHGVCSRGICQCEEGWVGPTCE--ERSCHSH----CTE 732
Query: 577 FGRCQCGVCHCHANRTGRACECSGDMDSCISPEGGLCSGHGRCKCNR----CQCLDGYYG 632
G+C+ G C C G C + +D+ GLC G+GRC ++ C C G+ G
Sbjct: 733 HGQCKDGKCECSPGWEGDHCTIAHYLDAVRDGCPGLCFGNGRCTLDQNGWHCVCQVGWSG 792
Query: 633 ALCD 636
C+
Sbjct: 793 TGCN 796
>gi|62988324 tenascin N [Homo sapiens]
Length = 1299
Score = 79.3 bits (194), Expect = 1e-14
Identities = 57/180 (31%), Positives = 68/180 (37%), Gaps = 40/180 (22%)
Query: 464 EELIVELHTLCDCN--CSDTQPQAPHCSD-GQGHLQCGVCSCAPGRLGRLCECSVAELSS 520
EE +VE+ C C + HCS G L+ C C GR G CE L+
Sbjct: 116 EEEMVEMKEQCSAQRCCQGVTDLSRHCSGHGTFSLETCSCHCEEGREGPACE----RLAC 171
Query: 521 PDLESGCRAPNGTGPLCSGKGHCQCGRCSCSGQSSGHLCECDDASCERHEGILCGGFGRC 580
P CSG G C GRC C G +C +C + C G G C
Sbjct: 172 PGA-------------CSGHGRCVDGRCLCHEPYVG--ADCGYPACPEN----CSGHGEC 212
Query: 581 QCGVCHCHANRTGRACE---CSGDMDSCISPEGGLCSGHGRCKCNRCQCLDGYYGALCDQ 637
GVC CH + C C GD CSGHG C C C +G+ G C Q
Sbjct: 213 VRGVCQCHEDFMSEDCSEKRCPGD-----------CSGHGFCDTGECYCEEGFTGLDCAQ 261
Score = 56.6 bits (135), Expect = 9e-08
Identities = 40/114 (35%), Positives = 44/114 (38%), Gaps = 26/114 (22%)
Query: 540 KGHCQCGRCSCSGQSSGHLCECDDASCERHEGILCGGFGRCQCGVCHCHAN--RTGRACE 597
K C RC C G + RH C G G C CH R G ACE
Sbjct: 123 KEQCSAQRC-CQGVTD----------LSRH----CSGHGTFSLETCSCHCEEGREGPACE 167
Query: 598 CSGDMDSCISPEGGLCSGHGRCKCNRCQCLDGYYGALCDQCPGCKTPCERHRDC 651
+C G CSGHGRC RC C + Y GA C P C C H +C
Sbjct: 168 RL----AC----PGACSGHGRCVDGRCLCHEPYVGADCGY-PACPENCSGHGEC 212
>gi|170016091 odz, odd Oz/ten-m homolog 2 [Homo sapiens]
Length = 2765
Score = 78.2 bits (191), Expect = 3e-14
Identities = 67/218 (30%), Positives = 79/218 (36%), Gaps = 38/218 (17%)
Query: 480 DTQPQAPHCSDGQGHLQCGVCSCAPGRLGRLCECSVAELSSPDLESGCRAPNGTGPLCSG 539
D+ P G G GVC C PG LG C A+ + P LCSG
Sbjct: 571 DSVQDCPRNCHGNGECVSGVCHCFPGFLGADC----AKAACP-------------VLCSG 613
Query: 540 KGHCQCGRCSCSGQSSGHLCECDDASCERHEGILCGGFGRCQCGVCHCHANRTGRACECS 599
G G C C G C+ C CGG G C G C C A G CE
Sbjct: 614 NGQYSKGTCQCYSGWKGAECDVPMNQCIDPS---CGGHGSCIDGNCVCSAGYKGEHCE-- 668
Query: 600 GDMDSCISPEGGLCSGHGRCKCNRCQCLDGYYGALC--------DQCPGCKTPCERHRDC 651
++D C+ P CS HG C C C G+ G C DQC G T C
Sbjct: 669 -EVD-CLDP---TCSSHGVCVNGECLCSPGWGGLNCELARVQCPDQCSGHGTYLPDTGLC 723
Query: 652 AECGAFRTGP--LATNCSTACAHTNVTLALAPILDDGW 687
+ C GP CS C V + A ++GW
Sbjct: 724 S-CDPNWMGPDCSVEVCSVDCGTHGVCIGGACRCEEGW 760
Score = 75.5 bits (184), Expect = 2e-13
Identities = 76/254 (29%), Positives = 94/254 (37%), Gaps = 48/254 (18%)
Query: 475 DCNCSDTQPQAPHCSDGQGHLQC--GVCSCAPGRLGRLCECSVAELSSPDLESGCRAPNG 532
+C+ Q P C GH C G C C+ G G CE + P S NG
Sbjct: 632 ECDVPMNQCIDPSCG---GHGSCIDGNCVCSAGYKGEHCE--EVDCLDPTCSSHGVCVNG 686
Query: 533 TGPLCS---GKGHCQCGRCSCSGQSSGH--------LCECD------DASCERHEGILCG 575
LCS G +C+ R C Q SGH LC CD D S E + CG
Sbjct: 687 EC-LCSPGWGGLNCELARVQCPDQCSGHGTYLPDTGLCSCDPNWMGPDCSVEVCS-VDCG 744
Query: 576 GFGRCQCGVCHCHANRTGRACECSGDMDSCISPEGGLCSGHGRCKCNRCQCLDGYYGALC 635
G C G C C TG AC+ CI HG CK +C+C +G+ G C
Sbjct: 745 THGVCIGGACRCEEGWTGAACDQRVCHPRCIE--------HGTCKDGKCECREGWNGEHC 796
Query: 636 DQCPGCKTPCERHRDCA------ECGAFRTGPLATNCS----TACAHT--NVTLALAPIL 683
GC C + C +C +TG C+ T+CA N L L
Sbjct: 797 -TIDGCPDLCNGNGRCTLGQNSWQC-VCQTGWRGPGCNVAMETSCADNKDNEGDGLVDCL 854
Query: 684 DDGWCKERTLDNQL 697
D C + N L
Sbjct: 855 DPDCCLQSACQNSL 868
>gi|157384973 tenascin R [Homo sapiens]
Length = 1358
Score = 77.0 bits (188), Expect = 6e-14
Identities = 75/267 (28%), Positives = 95/267 (35%), Gaps = 55/267 (20%)
Query: 403 GVHISYESQCEGPEKREGKAEDRGQCNHVRINQTVTFWVSL--QATHCLPEPHLLR--LR 458
G+ S E + + E AE GQ + T T ++ +A C +L+ L
Sbjct: 82 GLEASAEQEVSAED--ETLAEYMGQTSDHESQVTFTHRINFPKKACPCASSAQVLQELLS 139
Query: 459 ALGFSEELIVELHTLCDCNCSDTQPQA------PHCSDGQGHLQ---CGVCSCAPGRLGR 509
+ E + L C+ NC PHCS G G+ CG C C G G+
Sbjct: 140 RIEMLEREVSVLRDQCNANCCQESAATGQLDYIPHCS-GHGNFSFESCG-CICNEGWFGK 197
Query: 510 LCECSVAELSSPDLESGCRAPNGTGPLCSGKGHCQCGRCSCSGQSSGHLCECDDASCERH 569
C S P GC S +G C G+C C + SG +C + C
Sbjct: 198 NC-------SEPYCPLGC----------SSRGVCVDGQCICDSEYSGD--DCSELRCPTD 238
Query: 570 EGILCGGFGRCQCGVCHCHANRTGRACE---CSGDMDSCISPEGGLCSGHGRCKCNRCQC 626
C G C G C C TG C C GD CSG GRC C C
Sbjct: 239 ----CSSRGLCVDGECVCEEPYTGEDCRELRCPGD-----------CSGKGRCANGTCLC 283
Query: 627 LDGYYGALCDQCPGCKTPCERHRDCAE 653
+GY G C Q C C C E
Sbjct: 284 EEGYVGEDCGQ-RQCLNACSGRGQCEE 309
>gi|153946395 tenascin C precursor [Homo sapiens]
Length = 2201
Score = 74.3 bits (181), Expect = 4e-13
Identities = 60/199 (30%), Positives = 70/199 (35%), Gaps = 57/199 (28%)
Query: 482 QPQAPHCSDGQGHLQCGVCSCAPGRLGRLCECSVAELSSPDLESGCRAPNGTGPLCSGKG 541
+P PH QG + G C C G G +CS E C A C +G
Sbjct: 343 KPTCPHACHTQGRCEEGQCVCDEGFAG--VDCS---------EKRCPAD------CHNRG 385
Query: 542 HCQCGRCSCSGQSSGHLCECDDASCERHEGILCGGFGRCQCGVCHCHANRTGRACE---C 598
C GRC C +G +C + C C G GRC G C C TG C C
Sbjct: 386 RCVDGRCECDDGFTG--ADCGELKCPNG----CSGHGRCVNGQCVCDEGYTGEDCSQLRC 439
Query: 599 SGDMDS--------CISPEG------------GLCSGHGRCKCNRCQCLDGYYGALC--D 636
D S C+ +G C HGRC C C DGY G C
Sbjct: 440 PNDCHSRGRCVEGKCVCEQGFKGYDCSDMSCPNDCHQHGRCVNGMCVCDDGYTGEDCRDR 499
Query: 637 QCPGCKTPCERHRDCAECG 655
QCP RDC+ G
Sbjct: 500 QCP---------RDCSNRG 509
Score = 66.6 bits (161), Expect = 9e-11
Identities = 60/205 (29%), Positives = 76/205 (37%), Gaps = 48/205 (23%)
Query: 488 CSDGQGHLQCGVCSCAPGRLGRLCECSVAELSSPD----LESGCRAPNG-TGPLCS---- 538
CS+ G G+C C G G C + + + +E+ C G TG CS
Sbjct: 256 CSEEHGTCVDGLCVCHDGFAGDDCNKPLCLNNCYNRGRCVENECVCDEGFTGEDCSELIC 315
Query: 539 -----GKGHCQCGRCSC----SGQSSG-----HLCE----CDDASCERHEGIL------- 573
+G C G C C +G+ G H C C++ C EG
Sbjct: 316 PNDCFDRGRCINGTCYCEEGFTGEDCGKPTCPHACHTQGRCEEGQCVCDEGFAGVDCSEK 375
Query: 574 -----CGGFGRCQCGVCHCHANRTGRACECSGDMDSCISPEGGLCSGHGRCKCNRCQCLD 628
C GRC G C C TG C G++ P G CSGHGRC +C C +
Sbjct: 376 RCPADCHNRGRCVDGRCECDDGFTGADC---GELKC---PNG--CSGHGRCVNGQCVCDE 427
Query: 629 GYYGALCDQCPGCKTPCERHRDCAE 653
GY G C Q C C C E
Sbjct: 428 GYTGEDCSQL-RCPNDCHSRGRCVE 451
Score = 65.5 bits (158), Expect = 2e-10
Identities = 54/178 (30%), Positives = 70/178 (39%), Gaps = 36/178 (20%)
Query: 477 NCSDTQPQAPHCSDGQGHLQCGVCSCAPGRLGRLC-------ECSVAELSSPDLESGCRA 529
+CSD P+ G G+C C G G C +CS L ++ C
Sbjct: 464 DCSDMS--CPNDCHQHGRCVNGMCVCDDGYTGEDCRDRQCPRDCSNRGLC---VDGQCVC 518
Query: 530 PNG-TGPLCS---------GKGHCQCGRCSCSGQSSGHLCECDDASCERHEGILCGGFGR 579
+G TGP C+ G+G C G+C C G +C + C C G GR
Sbjct: 519 EDGFTGPDCAELSCPNDCHGQGRCVNGQCVCHEGFMGK--DCKEQRCPSD----CHGQGR 572
Query: 580 CQCGVCHCHANRTGRACECSGDMDSCISPEGGLCSGHGRCKCNRCQCLDGYYGALCDQ 637
C G C CH TG C SC S C+ G+C RC C +GY G C +
Sbjct: 573 CVDGQCICHEGFTGLDC----GQHSCPSD----CNNLGQCVSGRCICNEGYSGEDCSE 622
Score = 59.3 bits (142), Expect = 1e-08
Identities = 49/172 (28%), Positives = 60/172 (34%), Gaps = 32/172 (18%)
Query: 497 CGVCSCAPGRLGRLCECSVAELSSPDLESGCRAPNG-----------TGPLCSGKGHCQC 545
CG C+ AP L E L C A G T P CSG+G+
Sbjct: 111 CG-CAAAPDVKELLSRLEELENLVSSLREQCTAGAGCCLQPATGRLDTRPFCSGRGNFST 169
Query: 546 GRCSCSGQSSGHLCECDDASCERHEGILCGGFGRCQCGVCHCHANRTGRACE---CSGDM 602
C C + C + C + C GRC G C C TG C C D
Sbjct: 170 EGCGCVCEPGWKGPNCSEPECPGN----CHLRGRCIDGQCICDDGFTGEDCSQLACPSD- 224
Query: 603 DSCISPEGGLCSGHGRCKCNRCQCLDGYYGALCDQCPGCKTPC-ERHRDCAE 653
C+ G+C C C +GY GA C + C PC E H C +
Sbjct: 225 ----------CNDQGKCVNGVCICFEGYAGADCSR-EICPVPCSEEHGTCVD 265
Score = 57.0 bits (136), Expect = 7e-08
Identities = 56/204 (27%), Positives = 68/204 (33%), Gaps = 41/204 (20%)
Query: 474 CDCNCSDTQPQAPHCSD----GQGHLQ--C--GVCSCAPGRLGRLCECSVAELSSP-DLE 524
C C C + P+CS+ G HL+ C G C C G G C ++L+ P D
Sbjct: 172 CGCVCEPGW-KGPNCSEPECPGNCHLRGRCIDGQCICDDGFTGEDC----SQLACPSDCN 226
Query: 525 SGCRAPNGTGPLCSGKGHCQCGRCSCSGQSSGHLCECDDASCERHEGIL----------- 573
+ NG G C R C S C D C H+G
Sbjct: 227 DQGKCVNGVCICFEGYAGADCSREICPVPCSEEHGTCVDGLCVCHDGFAGDDCNKPLCLN 286
Query: 574 -CGGFGRCQCGVCHCHANRTGRACE---CSGDMDSCISPEGGLCSGHGRCKCNRCQCLDG 629
C GRC C C TG C C D C GRC C C +G
Sbjct: 287 NCYNRGRCVENECVCDEGFTGEDCSELICPND-----------CFDRGRCINGTCYCEEG 335
Query: 630 YYGALCDQCPGCKTPCERHRDCAE 653
+ G C + P C C C E
Sbjct: 336 FTGEDCGK-PTCPHACHTQGRCEE 358
>gi|24586659 scavenger receptor class F, member 2 isoform 1 [Homo
sapiens]
Length = 870
Score = 67.0 bits (162), Expect = 7e-11
Identities = 63/245 (25%), Positives = 85/245 (34%), Gaps = 72/245 (29%)
Query: 488 CSDGQGHLQCGVCSCAPGRLGRLCECSV-AELSSPDLESGCRAPNGTGPLCSGKGHCQC- 545
CS+ + ++ G C C G G C+ + PD + LCS H QC
Sbjct: 86 CSENEVCVRPGECRCRHGYFGANCDTKCPRQFWGPDCKE----------LCSCHPHGQCE 135
Query: 546 ---GRCSCSGQSSG----HLCECDDASCERHEG----------------ILCGGFGRC-- 580
G+C+C + G H C+C +C G C RC
Sbjct: 136 DVTGQCTCHARRWGARCEHACQCQHGTCHPRSGACRCEPGWWGAQCASACYCSATSRCDP 195
Query: 581 QCGVCHCHANRTGRAC--ECSGDMDSCISPEGGLCSGHGR---------CKCNR------ 623
Q G C CHA GR+C +C+ + C + G C R C+C R
Sbjct: 196 QTGACLCHAGWWGRSCNNQCACNSSPC-EQQSGRCQCRERTFGARCDRYCQCFRGRCHPV 254
Query: 624 ---CQCLDGYYGALC-DQCP------GCKT---PCERHRDC----AECGAFRTGPLATNC 666
C C GY G C + CP GC+ C+ + C C G T C
Sbjct: 255 DGTCACEPGYRGKYCREPCPAGFYGLGCRRRCGQCKGQQPCTVAEGRCLTCEPGWNGTKC 314
Query: 667 STACA 671
CA
Sbjct: 315 DQPCA 319
Score = 63.2 bits (152), Expect = 9e-10
Identities = 62/236 (26%), Positives = 87/236 (36%), Gaps = 48/236 (20%)
Query: 474 CDCNCSDTQPQAPH---CSDGQGHLQCGVCSCAPGRLGRLC--ECSVAELSSPDLESG-- 526
C C+ + H C G H + G C C PG G C C + S D ++G
Sbjct: 141 CTCHARRWGARCEHACQCQHGTCHPRSGACRCEPGWWGAQCASACYCSATSRCDPQTGAC 200
Query: 527 -CRAPNGTGPLCSGKGHCQCGRCSCSGQSSGHLCECDD----ASCERHEGILCGGF-GRC 580
C A G C+ + C C C QS C+C + A C+R+ C F GRC
Sbjct: 201 LCHA-GWWGRSCNNQ--CACNSSPCEQQSG--RCQCRERTFGARCDRY----CQCFRGRC 251
Query: 581 Q--CGVCHCHANRTGRAC------------------ECSGDMDSCISPEGGLCS---GHG 617
G C C G+ C +C G C EG + G
Sbjct: 252 HPVDGTCACEPGYRGKYCREPCPAGFYGLGCRRRCGQCKG-QQPCTVAEGRCLTCEPGWN 310
Query: 618 RCKCNRCQCLDGYYGALCD-QCPGCKTPCERHRDCAECGAFRTGPLATNCSTACAH 672
KC++ C G+YG C +CP C+ + +C G + C T C++
Sbjct: 311 GTKCDQ-PCATGFYGEGCSHRCPPCRDGHACNHVTGKCTRCNAGWIGDRCETKCSN 365
Score = 48.5 bits (114), Expect = 2e-05
Identities = 58/219 (26%), Positives = 75/219 (34%), Gaps = 45/219 (20%)
Query: 474 CDCNCSDTQPQAPHCS-----------------DGQGHLQCGVCSCAPGRLGRLCECSVA 516
C CN S + Q+ C G+ H G C+C PG G+ C
Sbjct: 215 CACNSSPCEQQSGRCQCRERTFGARCDRYCQCFRGRCHPVDGTCACEPGYRGKYCR---E 271
Query: 517 ELSSPDLESGCRAPNGTGPLCSGKGHCQC--GRC-SCSGQSSGHLCECDDASCERHEGIL 573
+ GCR G C G+ C GRC +C +G C+ A+ EG
Sbjct: 272 PCPAGFYGLGCRRRCGQ---CKGQQPCTVAEGRCLTCEPGWNGTKCDQPCATGFYGEGCS 328
Query: 574 -----CGGFGRCQ--CGVC-HCHANRTGRACE--CSGDM--DSCISPEGGLCSGHGRCKC 621
C C G C C+A G CE CS + C SGH +
Sbjct: 329 HRCPPCRDGHACNHVTGKCTRCNAGWIGDRCETKCSNGTYGEDCAFVCADCGSGHCDFQS 388
Query: 622 NRCQCLDGYYGALCD-QCP------GCKTPCERHRDCAE 653
RC C G +G C+ CP C C H D +
Sbjct: 389 GRCLCSPGVHGPHCNVTCPPGLHGADCAQACSCHEDTCD 427
Score = 37.0 bits (84), Expect = 0.072
Identities = 31/105 (29%), Positives = 40/105 (38%), Gaps = 37/105 (35%)
Query: 581 QCGVCHCHANRTGRACECSGDMDSCISPEGGLCSGHGRCKCNRCQCLDGYYGALCD-QC- 638
+CG+ C N T CS + + C+ P C+C GY+GA CD +C
Sbjct: 74 ECGIAVCEGNST-----CS-ENEVCVRP-------------GECRCRHGYFGANCDTKCP 114
Query: 639 -----PGCK--TPCERHRDCAE------CGAFRTGPLATNCSTAC 670
P CK C H C + C A R G C AC
Sbjct: 115 RQFWGPDCKELCSCHPHGQCEDVTGQCTCHARRWG---ARCEHAC 156
>gi|33598937 scavenger receptor class F, member 2 isoform 2 [Homo
sapiens]
Length = 865
Score = 67.0 bits (162), Expect = 7e-11
Identities = 63/245 (25%), Positives = 85/245 (34%), Gaps = 72/245 (29%)
Query: 488 CSDGQGHLQCGVCSCAPGRLGRLCECSV-AELSSPDLESGCRAPNGTGPLCSGKGHCQC- 545
CS+ + ++ G C C G G C+ + PD + LCS H QC
Sbjct: 86 CSENEVCVRPGECRCRHGYFGANCDTKCPRQFWGPDCKE----------LCSCHPHGQCE 135
Query: 546 ---GRCSCSGQSSG----HLCECDDASCERHEG----------------ILCGGFGRC-- 580
G+C+C + G H C+C +C G C RC
Sbjct: 136 DVTGQCTCHARRWGARCEHACQCQHGTCHPRSGACRCEPGWWGAQCASACYCSATSRCDP 195
Query: 581 QCGVCHCHANRTGRAC--ECSGDMDSCISPEGGLCSGHGR---------CKCNR------ 623
Q G C CHA GR+C +C+ + C + G C R C+C R
Sbjct: 196 QTGACLCHAGWWGRSCNNQCACNSSPC-EQQSGRCQCRERTFGARCDRYCQCFRGRCHPV 254
Query: 624 ---CQCLDGYYGALC-DQCP------GCKT---PCERHRDC----AECGAFRTGPLATNC 666
C C GY G C + CP GC+ C+ + C C G T C
Sbjct: 255 DGTCACEPGYRGKYCREPCPAGFYGLGCRRRCGQCKGQQPCTVAEGRCLTCEPGWNGTKC 314
Query: 667 STACA 671
CA
Sbjct: 315 DQPCA 319
Score = 63.2 bits (152), Expect = 9e-10
Identities = 62/236 (26%), Positives = 87/236 (36%), Gaps = 48/236 (20%)
Query: 474 CDCNCSDTQPQAPH---CSDGQGHLQCGVCSCAPGRLGRLC--ECSVAELSSPDLESG-- 526
C C+ + H C G H + G C C PG G C C + S D ++G
Sbjct: 141 CTCHARRWGARCEHACQCQHGTCHPRSGACRCEPGWWGAQCASACYCSATSRCDPQTGAC 200
Query: 527 -CRAPNGTGPLCSGKGHCQCGRCSCSGQSSGHLCECDD----ASCERHEGILCGGF-GRC 580
C A G C+ + C C C QS C+C + A C+R+ C F GRC
Sbjct: 201 LCHA-GWWGRSCNNQ--CACNSSPCEQQSG--RCQCRERTFGARCDRY----CQCFRGRC 251
Query: 581 Q--CGVCHCHANRTGRAC------------------ECSGDMDSCISPEGGLCS---GHG 617
G C C G+ C +C G C EG + G
Sbjct: 252 HPVDGTCACEPGYRGKYCREPCPAGFYGLGCRRRCGQCKG-QQPCTVAEGRCLTCEPGWN 310
Query: 618 RCKCNRCQCLDGYYGALCD-QCPGCKTPCERHRDCAECGAFRTGPLATNCSTACAH 672
KC++ C G+YG C +CP C+ + +C G + C T C++
Sbjct: 311 GTKCDQ-PCATGFYGEGCSHRCPPCRDGHACNHVTGKCTRCNAGWIGDRCETKCSN 365
Score = 48.5 bits (114), Expect = 2e-05
Identities = 58/219 (26%), Positives = 75/219 (34%), Gaps = 45/219 (20%)
Query: 474 CDCNCSDTQPQAPHCS-----------------DGQGHLQCGVCSCAPGRLGRLCECSVA 516
C CN S + Q+ C G+ H G C+C PG G+ C
Sbjct: 215 CACNSSPCEQQSGRCQCRERTFGARCDRYCQCFRGRCHPVDGTCACEPGYRGKYCR---E 271
Query: 517 ELSSPDLESGCRAPNGTGPLCSGKGHCQC--GRC-SCSGQSSGHLCECDDASCERHEGIL 573
+ GCR G C G+ C GRC +C +G C+ A+ EG
Sbjct: 272 PCPAGFYGLGCRRRCGQ---CKGQQPCTVAEGRCLTCEPGWNGTKCDQPCATGFYGEGCS 328
Query: 574 -----CGGFGRCQ--CGVC-HCHANRTGRACE--CSGDM--DSCISPEGGLCSGHGRCKC 621
C C G C C+A G CE CS + C SGH +
Sbjct: 329 HRCPPCRDGHACNHVTGKCTRCNAGWIGDRCETKCSNGTYGEDCAFVCADCGSGHCDFQS 388
Query: 622 NRCQCLDGYYGALCD-QCP------GCKTPCERHRDCAE 653
RC C G +G C+ CP C C H D +
Sbjct: 389 GRCLCSPGVHGPHCNVTCPPGLHGADCAQACSCHEDTCD 427
Score = 37.0 bits (84), Expect = 0.072
Identities = 31/105 (29%), Positives = 40/105 (38%), Gaps = 37/105 (35%)
Query: 581 QCGVCHCHANRTGRACECSGDMDSCISPEGGLCSGHGRCKCNRCQCLDGYYGALCD-QC- 638
+CG+ C N T CS + + C+ P C+C GY+GA CD +C
Sbjct: 74 ECGIAVCEGNST-----CS-ENEVCVRP-------------GECRCRHGYFGANCDTKCP 114
Query: 639 -----PGCK--TPCERHRDCAE------CGAFRTGPLATNCSTAC 670
P CK C H C + C A R G C AC
Sbjct: 115 RQFWGPDCKELCSCHPHGQCEDVTGQCTCHARRWG---ARCEHAC 156
>gi|14192943 multiple EGF-like-domains 10 [Homo sapiens]
Length = 1140
Score = 63.5 bits (153), Expect = 7e-10
Identities = 66/238 (27%), Positives = 80/238 (33%), Gaps = 58/238 (24%)
Query: 478 CSDTQPQAPHCSDGQGHLQC----------GVCSCAPGRLGRLCE--CSVAELSSPDLES 525
C D Q + +D QC G C C PG G CE C + P E
Sbjct: 178 CEDRCEQGTYGNDCHQRCQCQNGATCDHVTGECRCPPGYTGAFCEDLCPPGK-HGPQCEQ 236
Query: 526 GCRAPNGTGPLCSGKGHCQCGRCSCSGQSSGHLC--ECDDA--------SCERHEGILCG 575
C NG G H G CSC G +C C + C+ H G C
Sbjct: 237 RCPCQNG------GVCHHVTGECSCPSGWMGTVCGQPCPEGRFGKNCSQECQCHNGGTCD 290
Query: 576 GFGRCQCGVCHCHANRTGRAC--ECSGD------MDSCISPEGGLC-SGHGRCKC----- 621
G CHC TG C EC ++C GG C G C C
Sbjct: 291 ----AATGQCHCSPGYTGERCQDECPVGTYGVLCAETCQCVNGGKCYHVSGACLCEAGFA 346
Query: 622 -NRCQ---CLDGYYGALCDQCPGCKTPCERHRDC----AECGAFRTGPLATNCSTACA 671
RC+ C +G YG CD+ C E C EC A + G C+ C+
Sbjct: 347 GERCEARLCPEGLYGIKCDK--RCPCHLENTHSCHPMSGEC-ACKPGWSGLYCNETCS 401
Score = 54.7 bits (130), Expect = 3e-07
Identities = 55/221 (24%), Positives = 75/221 (33%), Gaps = 44/221 (19%)
Query: 482 QPQAPHCSDGQGHLQCGVCSCAPGRLGRLCECSVAE-LSSPDLESGCRAPNGTGPLCSGK 540
+ + P + G H G CSC G +G +C E + C+ NG G
Sbjct: 235 EQRCPCQNGGVCHHVTGECSCPSGWMGTVCGQPCPEGRFGKNCSQECQCHNG------GT 288
Query: 541 GHCQCGRCSCSGQSSGHLCECDDASCERHEGILCGGFGRCQC----------GVCHCHAN 590
G+C CS +G C+ D+ + G+LC CQC G C C A
Sbjct: 289 CDAATGQCHCSPGYTGERCQ-DECPVGTY-GVLCA--ETCQCVNGGKCYHVSGACLCEAG 344
Query: 591 RTGRACE------------------CSGDMDSCISPEGGLCS---GHGRCKCNRCQCLDG 629
G CE C + P G C+ G CN C G
Sbjct: 345 FAGERCEARLCPEGLYGIKCDKRCPCHLENTHSCHPMSGECACKPGWSGLYCNE-TCSPG 403
Query: 630 YYGALCDQCPGCKTPCERHRDCAECGAFRTGPLATNCSTAC 670
+YG C Q C+ + +C G +CST C
Sbjct: 404 FYGEACQQICSCQNGADCDSVTGKC-TCAPGFKGIDCSTPC 443
Score = 54.3 bits (129), Expect = 4e-07
Identities = 65/249 (26%), Positives = 84/249 (33%), Gaps = 69/249 (27%)
Query: 488 CSDGQG-HLQCGVCSCAPGRLGRLCECSVAE-LSSPDLESGCRAPNGTGPLCS-GKGHCQ 544
CS G H G C C PG G C+ AE P+ C NG CS G C+
Sbjct: 544 CSHADGCHPTTGHCRCLPGWSGVHCDSVCAEGRWGPNCSLPCYCKNGAS--CSPDDGICE 601
Query: 545 CG------RCS--CSGQSSGHLC-----ECDDASCERHE------------GILC----- 574
C C CS GH C +C +S H G LC
Sbjct: 602 CAPGFRGTTCQRICSPGFYGHRCSQTCPQCVHSSGPCHHITGLCDCLPGFTGALCNEVCP 661
Query: 575 -GGFGRCQCGVCHCHANRT----GRACEC-------------------SGDMDSCISPEG 610
G FG+ G+C C N T R+C+C + +C G
Sbjct: 662 SGRFGKNCAGICTCTNNGTCNPIDRSCQCYPGWIGSDCSQPCPPAHWGPNCIHTCNCHNG 721
Query: 611 GLCSGH-GRCKCN--------RCQCLDGYYGALCDQCPGCKTPCERHRDCAECGAFRTGP 661
CS + G CKC +C G+YG C C+ + +C RTG
Sbjct: 722 AFCSAYDGECKCTPGWTGLYCTQRCPLGFYGKDCALICQCQNGADCDHISGQC-TCRTGF 780
Query: 662 LATNCSTAC 670
+ +C C
Sbjct: 781 MGRHCEQKC 789
Score = 53.9 bits (128), Expect = 6e-07
Identities = 55/197 (27%), Positives = 70/197 (35%), Gaps = 51/197 (25%)
Query: 498 GVCSCAPGRLGRLCECSVAE----LSSPDLESGCRAPNGTGPLCSGKGHCQCGRCSCSGQ 553
G C+CAPG G CE + L+ + C +G P GHC+C G
Sbjct: 512 GTCTCAPGWRGEKCELPCQDGTYGLNCAE-RCDCSHADGCHPT---TGHCRC----LPGW 563
Query: 554 SSGHLCECDDASCERHEGILCGGFGRCQCGVCHCHANRTGRACECSGDMDSCISPEGGLC 613
S H CD E G C C+C + G +C SP+ G+C
Sbjct: 564 SGVH---CDSVCAEGRWGPNCS-------LPCYC---KNGASC----------SPDDGIC 600
Query: 614 SGHGRCKCNRCQ--CLDGYYGALCDQ-CPGC---KTPCERHRDCAECGAFRTGPLAT--- 664
+ CQ C G+YG C Q CP C PC +C TG L
Sbjct: 601 ECAPGFRGTTCQRICSPGFYGHRCSQTCPQCVHSSGPCHHITGLCDCLPGFTGALCNEVC 660
Query: 665 -------NCSTACAHTN 674
NC+ C TN
Sbjct: 661 PSGRFGKNCAGICTCTN 677
Score = 53.1 bits (126), Expect = 1e-06
Identities = 58/195 (29%), Positives = 69/195 (35%), Gaps = 46/195 (23%)
Query: 502 CAPG--RLGRLCECSVAELSSPDLESGCRAPNGTGPLCSGKGHCQCGRCSCSGQSSGHLC 559
C PG G +C V + + C APN T G G C +C G G C
Sbjct: 94 CCPGFYESGEMC---VPHCADKCVHGRCIAPN-TCQCEPGWGGTNCSS-ACDGDHWGPHC 148
Query: 560 ECDDASCERHEGILCGGFGRCQCGVCHCHANRTGRACECSGDMDSC-ISPEGGLCSGHGR 618
+ C+ G LC G CHC A G CE D C G C H R
Sbjct: 149 T---SRCQCKNGALCNPI----TGACHCAAGFRGWRCE-----DRCEQGTYGNDC--HQR 194
Query: 619 CKC----------NRCQCLDGYYGALC-DQCPGCK--------TPCER----HRDCAECG 655
C+C C+C GY GA C D CP K PC+ H EC
Sbjct: 195 CQCQNGATCDHVTGECRCPPGYTGAFCEDLCPPGKHGPQCEQRCPCQNGGVCHHVTGECS 254
Query: 656 AFRTGPLATNCSTAC 670
+G + T C C
Sbjct: 255 C-PSGWMGTVCGQPC 268
Score = 52.8 bits (125), Expect = 1e-06
Identities = 53/193 (27%), Positives = 66/193 (34%), Gaps = 37/193 (19%)
Query: 478 CSDTQPQAPHCSDGQGHLQCGVCSCAPGRLGRLCECSVAELSSPDLESGCRAPNGTG-PL 536
CS T PQ H S G H G+C C PG G LC + SG N G
Sbjct: 624 CSQTCPQCVH-SSGPCHHITGLCDCLPGFTGALC--------NEVCPSGRFGKNCAGICT 674
Query: 537 CSGKGHCQ--CGRCSCSGQSSGHLCE--CDDA--------SCERHEGILCGGFGRCQCGV 584
C+ G C C C G C C A +C H G C + G
Sbjct: 675 CTNNGTCNPIDRSCQCYPGWIGSDCSQPCPPAHWGPNCIHTCNCHNGAFCSAYD----GE 730
Query: 585 CHCHANRTGRACECSGDMDSCISPEGGLCSGHGRCKCN----RCQCLDGYYGALCDQ-CP 639
C C TG C + +C C+ +C C G+ G C+Q CP
Sbjct: 731 CKCTPGWTGLYCTQRCPLGFYGKDCALICQCQNGADCDHISGQCTCRTGFMGRHCEQKCP 790
Query: 640 ------GCKTPCE 646
GC+ C+
Sbjct: 791 SGTYGYGCRQICD 803
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.136 0.433
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,723,510
Number of Sequences: 37866
Number of extensions: 1816716
Number of successful extensions: 7634
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 282
Number of HSP's that attempted gapping in prelim test: 5008
Number of HSP's gapped (non-prelim): 1382
length of query: 798
length of database: 18,247,518
effective HSP length: 110
effective length of query: 688
effective length of database: 14,082,258
effective search space: 9688593504
effective search space used: 9688593504
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.