Guide to the Human Genome
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Search of human proteins with 4503841

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|4503841 ATP-dependent DNA helicase II, 70 kDa subunit [Homo
sapiens]
         (609 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|4503841 ATP-dependent DNA helicase II, 70 kDa subunit [Homo s...  1209   0.0  
gi|178056552 non-SMC condensin I complex, subunit D2 [Homo sapiens]    37   0.069
gi|157694494 MYB binding protein 1a isoform 1 [Homo sapiens]           35   0.20 
gi|157694492 MYB binding protein 1a isoform 2 [Homo sapiens]           35   0.20 
gi|150418007 RAN binding protein 2 [Homo sapiens]                      34   0.45 
gi|239735590 TRAF2 and NCK interacting kinase isoform 7 [Homo sa...    34   0.45 
gi|239735586 TRAF2 and NCK interacting kinase isoform 5 [Homo sa...    34   0.45 
gi|239735582 TRAF2 and NCK interacting kinase isoform 3 [Homo sa...    34   0.45 
gi|55741807 TRAF2 and NCK interacting kinase isoform 1 [Homo sap...    34   0.45 
gi|8922633 high-mobility group 20A [Homo sapiens]                      33   0.58 
gi|221307607 RANBP2-like and GRIP domain containing 3 [Homo sapi...    33   0.76 
gi|211059431 RANBP2-like and GRIP domain containing 4 [Homo sapi...    33   0.76 
gi|239735592 TRAF2 and NCK interacting kinase isoform 8 [Homo sa...    32   1.3  
gi|239735588 TRAF2 and NCK interacting kinase isoform 6 [Homo sa...    32   1.3  
gi|239735584 TRAF2 and NCK interacting kinase isoform 4 [Homo sa...    32   1.3  
gi|239735580 TRAF2 and NCK interacting kinase isoform 2 [Homo sa...    32   1.3  
gi|22749479 canopy 4 homolog [Homo sapiens]                            32   1.3  
gi|109134347 NY-REN-58 antigen [Homo sapiens]                          32   1.3  
gi|109134355 NY-REN-58 antigen [Homo sapiens]                          32   1.3  
gi|4759208 TAO kinase 2 isoform 1 [Homo sapiens]                       32   2.2  
gi|45505130 TAO kinase 2 isoform 2 [Homo sapiens]                      32   2.2  
gi|193290174 hypothetical protein LOC642987 [Homo sapiens]             32   2.2  
gi|83267877 RANBP2-like and GRIP domain containing 5 isoform 1 [...    31   2.9  
gi|14149991 RANBP2-like and GRIP domain containing 5 isoform 2 [...    31   2.9  
gi|118197270 RANBP2-like and GRIP domain containing 7 [Homo sapi...    31   2.9  
gi|182765478 RANBP2-like and GRIP domain containing 6 [Homo sapi...    31   2.9  
gi|115527097 CDC42-binding protein kinase beta [Homo sapiens]          31   3.8  
gi|169162953 PREDICTED: RANBP2-like and GRIP domain containing 8...    30   4.9  
gi|14043024 BCL2-associated athanogene 3 [Homo sapiens]                30   6.5  
gi|11415048 nucleosome assembly protein 1-like 2 [Homo sapiens]        30   6.5  

>gi|4503841 ATP-dependent DNA helicase II, 70 kDa subunit [Homo
           sapiens]
          Length = 609

 Score = 1209 bits (3127), Expect = 0.0
 Identities = 609/609 (100%), Positives = 609/609 (100%)

Query: 1   MSGWESYYKTEGDEEAEEEQEENLEASGDYKYSGRDSLIFLVDASKAMFESQSEDELTPF 60
           MSGWESYYKTEGDEEAEEEQEENLEASGDYKYSGRDSLIFLVDASKAMFESQSEDELTPF
Sbjct: 1   MSGWESYYKTEGDEEAEEEQEENLEASGDYKYSGRDSLIFLVDASKAMFESQSEDELTPF 60

Query: 61  DMSIQCIQSVYISKIISSDRDLLAVVFYGTEKDKNSVNFKNIYVLQELDNPGAKRILELD 120
           DMSIQCIQSVYISKIISSDRDLLAVVFYGTEKDKNSVNFKNIYVLQELDNPGAKRILELD
Sbjct: 61  DMSIQCIQSVYISKIISSDRDLLAVVFYGTEKDKNSVNFKNIYVLQELDNPGAKRILELD 120

Query: 121 QFKGQQGQKRFQDMMGHGSDYSLSEVLWVCANLFSDVQFKMSHKRIMLFTNEDNPHGNDS 180
           QFKGQQGQKRFQDMMGHGSDYSLSEVLWVCANLFSDVQFKMSHKRIMLFTNEDNPHGNDS
Sbjct: 121 QFKGQQGQKRFQDMMGHGSDYSLSEVLWVCANLFSDVQFKMSHKRIMLFTNEDNPHGNDS 180

Query: 181 AKASRARTKAGDLRDTGIFLDLMHLKKPGGFDISLFYRDIISIAEDEDLRVHFEESSKLE 240
           AKASRARTKAGDLRDTGIFLDLMHLKKPGGFDISLFYRDIISIAEDEDLRVHFEESSKLE
Sbjct: 181 AKASRARTKAGDLRDTGIFLDLMHLKKPGGFDISLFYRDIISIAEDEDLRVHFEESSKLE 240

Query: 241 DLLRKVRAKETRKRALSRLKLKLNKDIVISVGIYNLVQKALKPPPIKLYRETNEPVKTKT 300
           DLLRKVRAKETRKRALSRLKLKLNKDIVISVGIYNLVQKALKPPPIKLYRETNEPVKTKT
Sbjct: 241 DLLRKVRAKETRKRALSRLKLKLNKDIVISVGIYNLVQKALKPPPIKLYRETNEPVKTKT 300

Query: 301 RTFNTSTGGLLLPSDTKRSQIYGSRQIILEKEETEELKRFDDPGLMLMGFKPLVLLKKHH 360
           RTFNTSTGGLLLPSDTKRSQIYGSRQIILEKEETEELKRFDDPGLMLMGFKPLVLLKKHH
Sbjct: 301 RTFNTSTGGLLLPSDTKRSQIYGSRQIILEKEETEELKRFDDPGLMLMGFKPLVLLKKHH 360

Query: 361 YLRPSLFVYPEESLVIGSSTLFSALLIKCLEKEVAALCRYTPRRNIPPYFVALVPQEEEL 420
           YLRPSLFVYPEESLVIGSSTLFSALLIKCLEKEVAALCRYTPRRNIPPYFVALVPQEEEL
Sbjct: 361 YLRPSLFVYPEESLVIGSSTLFSALLIKCLEKEVAALCRYTPRRNIPPYFVALVPQEEEL 420

Query: 421 DDQKIQVTPPGFQLVFLPFADDKRKMPFTEKIMATPEQVGKMKAIVEKLRFTYRSDSFEN 480
           DDQKIQVTPPGFQLVFLPFADDKRKMPFTEKIMATPEQVGKMKAIVEKLRFTYRSDSFEN
Sbjct: 421 DDQKIQVTPPGFQLVFLPFADDKRKMPFTEKIMATPEQVGKMKAIVEKLRFTYRSDSFEN 480

Query: 481 PVLQQHFRNLEALALDLMEPEQAVDLTLPKVEAMNKRLGSLVDEFKELVYPPDYNPEGKV 540
           PVLQQHFRNLEALALDLMEPEQAVDLTLPKVEAMNKRLGSLVDEFKELVYPPDYNPEGKV
Sbjct: 481 PVLQQHFRNLEALALDLMEPEQAVDLTLPKVEAMNKRLGSLVDEFKELVYPPDYNPEGKV 540

Query: 541 TKRKHDNEGSGSKRPKVEYSEEELKTHISKGTLGKFTVPMLKEACRAYGLKSGLKKQELL 600
           TKRKHDNEGSGSKRPKVEYSEEELKTHISKGTLGKFTVPMLKEACRAYGLKSGLKKQELL
Sbjct: 541 TKRKHDNEGSGSKRPKVEYSEEELKTHISKGTLGKFTVPMLKEACRAYGLKSGLKKQELL 600

Query: 601 EALTKHFQD 609
           EALTKHFQD
Sbjct: 601 EALTKHFQD 609


>gi|178056552 non-SMC condensin I complex, subunit D2 [Homo sapiens]
          Length = 1401

 Score = 36.6 bits (83), Expect = 0.069
 Identities = 34/121 (28%), Positives = 52/121 (42%), Gaps = 12/121 (9%)

Query: 476  DSFENPVLQQHFRNLEALALDLMEPEQAVDLTLPKVEAMNKRLGSLVDEFKELVYPPDY- 534
            D FE  +   H R L+ +    +E  QA     P   A     GS            D+ 
Sbjct: 1283 DEFEQKLRACHTRGLDGIKE--LEIGQAGSQRAPS--AKKPSTGSRYQPLASTASDNDFV 1338

Query: 535  NPEGKVTKRKHDN--EGSGSKRPKV-----EYSEEELKTHISKGTLGKFTVPMLKEACRA 587
             PE + T R+H N  + +  K+PKV     E SEE+L   +++    K T P+L+ + R 
Sbjct: 1339 TPEPRRTTRRHPNTQQRASKKKPKVVFSSDESSEEDLSAEMTEDETPKKTTPILRASARR 1398

Query: 588  Y 588
            +
Sbjct: 1399 H 1399


>gi|157694494 MYB binding protein 1a isoform 1 [Homo sapiens]
          Length = 1332

 Score = 35.0 bits (79), Expect = 0.20
 Identities = 18/52 (34%), Positives = 28/52 (53%)

Query: 5   ESYYKTEGDEEAEEEQEENLEASGDYKYSGRDSLIFLVDASKAMFESQSEDE 56
           E    +E +EE+E E+ E  E  GD     R+ L+ ++ A KA+    SE+E
Sbjct: 727 EDNRSSESEEESEGEESEEEERDGDVDQGFREQLMTVLQAGKALGGEDSENE 778


>gi|157694492 MYB binding protein 1a isoform 2 [Homo sapiens]
          Length = 1328

 Score = 35.0 bits (79), Expect = 0.20
 Identities = 18/52 (34%), Positives = 28/52 (53%)

Query: 5   ESYYKTEGDEEAEEEQEENLEASGDYKYSGRDSLIFLVDASKAMFESQSEDE 56
           E    +E +EE+E E+ E  E  GD     R+ L+ ++ A KA+    SE+E
Sbjct: 727 EDNRSSESEEESEGEESEEEERDGDVDQGFREQLMTVLQAGKALGGEDSENE 778


>gi|150418007 RAN binding protein 2 [Homo sapiens]
          Length = 3224

 Score = 33.9 bits (76), Expect = 0.45
 Identities = 23/110 (20%), Positives = 53/110 (48%), Gaps = 5/110 (4%)

Query: 463 KAIVEKLRFTYRSDSFENPV--LQQHFRNLEALALDLMEPEQAVDLTLPKVEAMNKRLGS 520
           K ++  L+   + +S   P+  L +HF +++  A +++E E+   +T   ++A+N  +  
Sbjct: 607 KKVLPLLKIIKKKNSIPEPIDPLFKHFHSVDIQASEIVEYEEDAHITFAILDAVNGNIED 666

Query: 521 LVDEFKELVYPPDYNPEGKVTKRKHDNEGSGSKRPKVEYSEEELKTHISK 570
            V  F+ +     Y     +  RK ++  + +  P+    +EE K ++ K
Sbjct: 667 AVTAFESIKSVVSYWNLALIFHRKAEDIENDALSPE---EQEECKNYLRK 713


>gi|239735590 TRAF2 and NCK interacting kinase isoform 7 [Homo
           sapiens]
          Length = 1276

 Score = 33.9 bits (76), Expect = 0.45
 Identities = 37/129 (28%), Positives = 51/129 (39%), Gaps = 17/129 (13%)

Query: 458 QVGKMKAIVEKLRFTYRSDSFENPVLQQHFRNLEALALDLMEPEQAVDLTLPKVEAMNKR 517
           Q G      E+ R    S S  +PVL      ++        PE++ D+T P   A  K+
Sbjct: 663 QPGSQAGSSERTRVRANSKSEGSPVLPHEPAKVK--------PEESRDITRPSRPASYKK 714

Query: 518 -----LGSLVDEFKELVYPPDYNPEGKVTKRKHDNEGSGSKRPKVEYSEEELKTHISKGT 572
                L +L  E +EL       P  KVT     +E S S   + E  E E  TH   GT
Sbjct: 715 AIDEDLTALAKELRELRIEETNRPMKKVTDYSSSSEESESSEEEEEDGESE--TH--DGT 770

Query: 573 LGKFTVPML 581
           +    +P L
Sbjct: 771 VAVSDIPRL 779


>gi|239735586 TRAF2 and NCK interacting kinase isoform 5 [Homo
           sapiens]
          Length = 1305

 Score = 33.9 bits (76), Expect = 0.45
 Identities = 37/129 (28%), Positives = 51/129 (39%), Gaps = 17/129 (13%)

Query: 458 QVGKMKAIVEKLRFTYRSDSFENPVLQQHFRNLEALALDLMEPEQAVDLTLPKVEAMNKR 517
           Q G      E+ R    S S  +PVL      ++        PE++ D+T P   A  K+
Sbjct: 692 QPGSQAGSSERTRVRANSKSEGSPVLPHEPAKVK--------PEESRDITRPSRPASYKK 743

Query: 518 -----LGSLVDEFKELVYPPDYNPEGKVTKRKHDNEGSGSKRPKVEYSEEELKTHISKGT 572
                L +L  E +EL       P  KVT     +E S S   + E  E E  TH   GT
Sbjct: 744 AIDEDLTALAKELRELRIEETNRPMKKVTDYSSSSEESESSEEEEEDGESE--TH--DGT 799

Query: 573 LGKFTVPML 581
           +    +P L
Sbjct: 800 VAVSDIPRL 808


>gi|239735582 TRAF2 and NCK interacting kinase isoform 3 [Homo
           sapiens]
          Length = 1331

 Score = 33.9 bits (76), Expect = 0.45
 Identities = 37/129 (28%), Positives = 51/129 (39%), Gaps = 17/129 (13%)

Query: 458 QVGKMKAIVEKLRFTYRSDSFENPVLQQHFRNLEALALDLMEPEQAVDLTLPKVEAMNKR 517
           Q G      E+ R    S S  +PVL      ++        PE++ D+T P   A  K+
Sbjct: 718 QPGSQAGSSERTRVRANSKSEGSPVLPHEPAKVK--------PEESRDITRPSRPASYKK 769

Query: 518 -----LGSLVDEFKELVYPPDYNPEGKVTKRKHDNEGSGSKRPKVEYSEEELKTHISKGT 572
                L +L  E +EL       P  KVT     +E S S   + E  E E  TH   GT
Sbjct: 770 AIDEDLTALAKELRELRIEETNRPMKKVTDYSSSSEESESSEEEEEDGESE--TH--DGT 825

Query: 573 LGKFTVPML 581
           +    +P L
Sbjct: 826 VAVSDIPRL 834


>gi|55741807 TRAF2 and NCK interacting kinase isoform 1 [Homo
           sapiens]
          Length = 1360

 Score = 33.9 bits (76), Expect = 0.45
 Identities = 37/129 (28%), Positives = 51/129 (39%), Gaps = 17/129 (13%)

Query: 458 QVGKMKAIVEKLRFTYRSDSFENPVLQQHFRNLEALALDLMEPEQAVDLTLPKVEAMNKR 517
           Q G      E+ R    S S  +PVL      ++        PE++ D+T P   A  K+
Sbjct: 747 QPGSQAGSSERTRVRANSKSEGSPVLPHEPAKVK--------PEESRDITRPSRPASYKK 798

Query: 518 -----LGSLVDEFKELVYPPDYNPEGKVTKRKHDNEGSGSKRPKVEYSEEELKTHISKGT 572
                L +L  E +EL       P  KVT     +E S S   + E  E E  TH   GT
Sbjct: 799 AIDEDLTALAKELRELRIEETNRPMKKVTDYSSSSEESESSEEEEEDGESE--TH--DGT 854

Query: 573 LGKFTVPML 581
           +    +P L
Sbjct: 855 VAVSDIPRL 863


>gi|8922633 high-mobility group 20A [Homo sapiens]
          Length = 347

 Score = 33.5 bits (75), Expect = 0.58
 Identities = 23/84 (27%), Positives = 35/84 (41%), Gaps = 4/84 (4%)

Query: 443 KRKMPFTEKIMATPEQVGKMKAIVEKLRFTYRSDSFENPVLQQHFRNLEALA----LDLM 498
           K  M F E+  A  + V  M+  VEKL      +   N VLQQH   L  +       + 
Sbjct: 241 KSNMEFEERNAALQKHVESMRTAVEKLEVDVIQERSRNTVLQQHLETLRQVLTSSFASMP 300

Query: 499 EPEQAVDLTLPKVEAMNKRLGSLV 522
            P      T+  +++   RL S++
Sbjct: 301 LPGSGETPTVDTIDSYMNRLHSII 324


>gi|221307607 RANBP2-like and GRIP domain containing 3 [Homo
           sapiens]
          Length = 1758

 Score = 33.1 bits (74), Expect = 0.76
 Identities = 22/110 (20%), Positives = 53/110 (48%), Gaps = 5/110 (4%)

Query: 463 KAIVEKLRFTYRSDSFENPV--LQQHFRNLEALALDLMEPEQAVDLTLPKVEAMNKRLGS 520
           K ++  L+   + +S   P+  L +HF +++  A +++E E+   +T   ++A+N  +  
Sbjct: 608 KKVLPLLKIIKKKNSIPEPIDPLFKHFHSVDIQASEIVEYEEDAHVTFAILDAVNGNIED 667

Query: 521 LVDEFKELVYPPDYNPEGKVTKRKHDNEGSGSKRPKVEYSEEELKTHISK 570
            +  F+ +     Y     +  RK ++  + +  P+    +EE K ++ K
Sbjct: 668 AMTAFESIKSVVSYWNLALIFHRKAEDIANDALSPE---EQEECKNYLRK 714


>gi|211059431 RANBP2-like and GRIP domain containing 4 [Homo
           sapiens]
          Length = 1758

 Score = 33.1 bits (74), Expect = 0.76
 Identities = 22/110 (20%), Positives = 53/110 (48%), Gaps = 5/110 (4%)

Query: 463 KAIVEKLRFTYRSDSFENPV--LQQHFRNLEALALDLMEPEQAVDLTLPKVEAMNKRLGS 520
           K ++  L+   + +S   P+  L +HF +++  A +++E E+   +T   ++A+N  +  
Sbjct: 608 KKVLPLLKIIKKKNSIPEPIDPLFKHFHSVDIQASEIVEYEEDAHVTFAILDAVNGNIED 667

Query: 521 LVDEFKELVYPPDYNPEGKVTKRKHDNEGSGSKRPKVEYSEEELKTHISK 570
            +  F+ +     Y     +  RK ++  + +  P+    +EE K ++ K
Sbjct: 668 AMTAFESIKSVVSYWNLALIFHRKAEDIANDALSPE---EQEECKNYLRK 714


>gi|239735592 TRAF2 and NCK interacting kinase isoform 8 [Homo
           sapiens]
          Length = 1268

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 36/124 (29%), Positives = 49/124 (39%), Gaps = 15/124 (12%)

Query: 458 QVGKMKAIVEKLRFTYRSDSFENPVLQQHFRNLEALALDLMEPEQAVDLTLPKVEAMNKR 517
           Q G      E+ R    S S  +PVL      ++        PE++ D+T P   A    
Sbjct: 663 QPGSQAGSSERTRVRANSKSEGSPVLPHEPAKVK--------PEESRDITRPSRPA---D 711

Query: 518 LGSLVDEFKELVYPPDYNPEGKVTKRKHDNEGSGSKRPKVEYSEEELKTHISKGTLGKFT 577
           L +L  E +EL       P  KVT     +E S S   + E  E E  TH   GT+    
Sbjct: 712 LTALAKELRELRIEETNRPMKKVTDYSSSSEESESSEEEEEDGESE--TH--DGTVAVSD 767

Query: 578 VPML 581
           +P L
Sbjct: 768 IPRL 771


>gi|239735588 TRAF2 and NCK interacting kinase isoform 6 [Homo
           sapiens]
          Length = 1297

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 36/124 (29%), Positives = 49/124 (39%), Gaps = 15/124 (12%)

Query: 458 QVGKMKAIVEKLRFTYRSDSFENPVLQQHFRNLEALALDLMEPEQAVDLTLPKVEAMNKR 517
           Q G      E+ R    S S  +PVL      ++        PE++ D+T P   A    
Sbjct: 692 QPGSQAGSSERTRVRANSKSEGSPVLPHEPAKVK--------PEESRDITRPSRPA---D 740

Query: 518 LGSLVDEFKELVYPPDYNPEGKVTKRKHDNEGSGSKRPKVEYSEEELKTHISKGTLGKFT 577
           L +L  E +EL       P  KVT     +E S S   + E  E E  TH   GT+    
Sbjct: 741 LTALAKELRELRIEETNRPMKKVTDYSSSSEESESSEEEEEDGESE--TH--DGTVAVSD 796

Query: 578 VPML 581
           +P L
Sbjct: 797 IPRL 800


>gi|239735584 TRAF2 and NCK interacting kinase isoform 4 [Homo
           sapiens]
          Length = 1323

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 36/124 (29%), Positives = 49/124 (39%), Gaps = 15/124 (12%)

Query: 458 QVGKMKAIVEKLRFTYRSDSFENPVLQQHFRNLEALALDLMEPEQAVDLTLPKVEAMNKR 517
           Q G      E+ R    S S  +PVL      ++        PE++ D+T P   A    
Sbjct: 718 QPGSQAGSSERTRVRANSKSEGSPVLPHEPAKVK--------PEESRDITRPSRPA---D 766

Query: 518 LGSLVDEFKELVYPPDYNPEGKVTKRKHDNEGSGSKRPKVEYSEEELKTHISKGTLGKFT 577
           L +L  E +EL       P  KVT     +E S S   + E  E E  TH   GT+    
Sbjct: 767 LTALAKELRELRIEETNRPMKKVTDYSSSSEESESSEEEEEDGESE--TH--DGTVAVSD 822

Query: 578 VPML 581
           +P L
Sbjct: 823 IPRL 826


>gi|239735580 TRAF2 and NCK interacting kinase isoform 2 [Homo
           sapiens]
          Length = 1352

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 36/124 (29%), Positives = 49/124 (39%), Gaps = 15/124 (12%)

Query: 458 QVGKMKAIVEKLRFTYRSDSFENPVLQQHFRNLEALALDLMEPEQAVDLTLPKVEAMNKR 517
           Q G      E+ R    S S  +PVL      ++        PE++ D+T P   A    
Sbjct: 747 QPGSQAGSSERTRVRANSKSEGSPVLPHEPAKVK--------PEESRDITRPSRPA---D 795

Query: 518 LGSLVDEFKELVYPPDYNPEGKVTKRKHDNEGSGSKRPKVEYSEEELKTHISKGTLGKFT 577
           L +L  E +EL       P  KVT     +E S S   + E  E E  TH   GT+    
Sbjct: 796 LTALAKELRELRIEETNRPMKKVTDYSSSSEESESSEEEEEDGESE--TH--DGTVAVSD 851

Query: 578 VPML 581
           +P L
Sbjct: 852 IPRL 855


>gi|22749479 canopy 4 homolog [Homo sapiens]
          Length = 248

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 14/21 (66%), Positives = 16/21 (76%)

Query: 9   KTEGDEEAEEEQEENLEASGD 29
           KTEG+EE EEE+EE  E  GD
Sbjct: 212 KTEGEEEQEEEEEEEEEEGGD 232


>gi|109134347 NY-REN-58 antigen [Homo sapiens]
          Length = 701

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 18/70 (25%), Positives = 35/70 (50%), Gaps = 2/70 (2%)

Query: 413 LVPQEEELDDQKIQVTPPGFQLVFLPFADDKRKMPFTEKIMATPEQVGKMKAIVEKLRF- 471
           LV + ++L++ K+Q+  P    +       + + P  E+     E+V K +A+  KLR+ 
Sbjct: 95  LVEKTKDLEEMKLQILTPQKLELLRAQIQQELETPMRERFRNLDEEVEKYRAVYNKLRYE 154

Query: 472 -TYRSDSFEN 480
            T+    FE+
Sbjct: 155 HTFLKSEFEH 164


>gi|109134355 NY-REN-58 antigen [Homo sapiens]
          Length = 701

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 18/70 (25%), Positives = 35/70 (50%), Gaps = 2/70 (2%)

Query: 413 LVPQEEELDDQKIQVTPPGFQLVFLPFADDKRKMPFTEKIMATPEQVGKMKAIVEKLRF- 471
           LV + ++L++ K+Q+  P    +       + + P  E+     E+V K +A+  KLR+ 
Sbjct: 95  LVEKTKDLEEMKLQILTPQKLELLRAQIQQELETPMRERFRNLDEEVEKYRAVYNKLRYE 154

Query: 472 -TYRSDSFEN 480
            T+    FE+
Sbjct: 155 HTFLKSEFEH 164


>gi|4759208 TAO kinase 2 isoform 1 [Homo sapiens]
          Length = 1049

 Score = 31.6 bits (70), Expect = 2.2
 Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 7/56 (12%)

Query: 11  EGDEEAEEEQEENLEA-------SGDYKYSGRDSLIFLVDASKAMFESQSEDELTP 59
           E +EE EEE+EE  EA        G++  +   S+I  +  S  +++   + E+TP
Sbjct: 381 EEEEEEEEEEEEGPEAREMAMMQEGEHTVTSHSSIIHRLPGSDNLYDDPYQPEITP 436


>gi|45505130 TAO kinase 2 isoform 2 [Homo sapiens]
          Length = 1235

 Score = 31.6 bits (70), Expect = 2.2
 Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 7/56 (12%)

Query: 11  EGDEEAEEEQEENLEA-------SGDYKYSGRDSLIFLVDASKAMFESQSEDELTP 59
           E +EE EEE+EE  EA        G++  +   S+I  +  S  +++   + E+TP
Sbjct: 381 EEEEEEEEEEEEGPEAREMAMMQEGEHTVTSHSSIIHRLPGSDNLYDDPYQPEITP 436


>gi|193290174 hypothetical protein LOC642987 [Homo sapiens]
          Length = 506

 Score = 31.6 bits (70), Expect = 2.2
 Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 1/78 (1%)

Query: 82  LLAVVFYGTEKDKNSVNFKNI-YVLQELDNPGAKRILELDQFKGQQGQKRFQDMMGHGSD 140
           L A+ F G    K    F N+ ++L+  +  G + +     F+  + +KR+++       
Sbjct: 199 LYALSFSGASYHKYPNIFSNVQFILKASEIIGKRELRSESIFRPVEDKKRYENTDSDMGG 258

Query: 141 YSLSEVLWVCANLFSDVQ 158
           Y ++ +LW C   +S VQ
Sbjct: 259 YEINHLLWHCVAAWSCVQ 276


>gi|83267877 RANBP2-like and GRIP domain containing 5 isoform 1
           [Homo sapiens]
          Length = 1765

 Score = 31.2 bits (69), Expect = 2.9
 Identities = 20/99 (20%), Positives = 49/99 (49%), Gaps = 5/99 (5%)

Query: 474 RSDSFENPV--LQQHFRNLEALALDLMEPEQAVDLTLPKVEAMNKRLGSLVDEFKELVYP 531
           + +S   P+  L +HF +++  A +++E E+   +T   ++A+N  +   V  F+ +   
Sbjct: 618 KKNSIPEPIDPLFKHFHSVDIQASEIVEYEEDAHITFAMLDAVNGNIEDAVTAFESIKSV 677

Query: 532 PDYNPEGKVTKRKHDNEGSGSKRPKVEYSEEELKTHISK 570
             Y     +  RK ++  + +  P+    +EE + +++K
Sbjct: 678 VSYWNLALIFHRKAEDIENDALSPE---EQEECRNYLTK 713


>gi|14149991 RANBP2-like and GRIP domain containing 5 isoform 2
           [Homo sapiens]
          Length = 904

 Score = 31.2 bits (69), Expect = 2.9
 Identities = 20/99 (20%), Positives = 49/99 (49%), Gaps = 5/99 (5%)

Query: 474 RSDSFENPV--LQQHFRNLEALALDLMEPEQAVDLTLPKVEAMNKRLGSLVDEFKELVYP 531
           + +S   P+  L +HF +++  A +++E E+   +T   ++A+N  +   V  F+ +   
Sbjct: 618 KKNSIPEPIDPLFKHFHSVDIQASEIVEYEEDAHITFAMLDAVNGNIEDAVTAFESIKSV 677

Query: 532 PDYNPEGKVTKRKHDNEGSGSKRPKVEYSEEELKTHISK 570
             Y     +  RK ++  + +  P+    +EE + +++K
Sbjct: 678 VSYWNLALIFHRKAEDIENDALSPE---EQEECRNYLTK 713


>gi|118197270 RANBP2-like and GRIP domain containing 7 [Homo
           sapiens]
          Length = 904

 Score = 31.2 bits (69), Expect = 2.9
 Identities = 20/99 (20%), Positives = 49/99 (49%), Gaps = 5/99 (5%)

Query: 474 RSDSFENPV--LQQHFRNLEALALDLMEPEQAVDLTLPKVEAMNKRLGSLVDEFKELVYP 531
           + +S   P+  L +HF +++  A +++E E+   +T   ++A+N  +   V  F+ +   
Sbjct: 618 KKNSIPEPIDPLFKHFHSVDIQASEIVEYEEDAHITFAMLDAVNGNIEDAVTAFESIKSV 677

Query: 532 PDYNPEGKVTKRKHDNEGSGSKRPKVEYSEEELKTHISK 570
             Y     +  RK ++  + +  P+    +EE + +++K
Sbjct: 678 VSYWNLALIFHRKAEDIENDALSPE---EQEECRNYLTK 713


>gi|182765478 RANBP2-like and GRIP domain containing 6 [Homo
           sapiens]
          Length = 1765

 Score = 31.2 bits (69), Expect = 2.9
 Identities = 20/99 (20%), Positives = 49/99 (49%), Gaps = 5/99 (5%)

Query: 474 RSDSFENPV--LQQHFRNLEALALDLMEPEQAVDLTLPKVEAMNKRLGSLVDEFKELVYP 531
           + +S   P+  L +HF +++  A +++E E+   +T   ++A+N  +   V  F+ +   
Sbjct: 618 KKNSIPEPIDPLFKHFHSVDIQASEIVEYEEDAHITFAMLDAVNGNIEDAVTAFESIKSV 677

Query: 532 PDYNPEGKVTKRKHDNEGSGSKRPKVEYSEEELKTHISK 570
             Y     +  RK ++  + +  P+    +EE + +++K
Sbjct: 678 VSYWNLALIFHRKAEDIENDALSPE---EQEECRNYLTK 713


>gi|115527097 CDC42-binding protein kinase beta [Homo sapiens]
          Length = 1711

 Score = 30.8 bits (68), Expect = 3.8
 Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 2/84 (2%)

Query: 222 SIAEDEDLRVHFEESSKLEDLLRKVRAKETRKRALSRLKLKLNKDIVISV-GIYNLVQKA 280
           ++ +DED++   E S ++E   R++R  E  K  LSR KL+ +   V S+ G    +  +
Sbjct: 423 TLTKDEDVQRDLEHSLQMEAYERRIRRLEQEKLELSR-KLQESTQTVQSLHGSSRALSNS 481

Query: 281 LKPPPIKLYRETNEPVKTKTRTFN 304
            +   IK   E  E +K K    N
Sbjct: 482 NRDKEIKKLNEEIERLKNKIADSN 505


>gi|169162953 PREDICTED: RANBP2-like and GRIP domain containing 8
           [Homo sapiens]
          Length = 1765

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 20/99 (20%), Positives = 49/99 (49%), Gaps = 5/99 (5%)

Query: 474 RSDSFENPV--LQQHFRNLEALALDLMEPEQAVDLTLPKVEAMNKRLGSLVDEFKELVYP 531
           + +S   P+  L +HF +++  A +++E E+   +T   ++A+N  +   V  F+ +   
Sbjct: 618 KKNSIPEPIDPLFKHFHSVDIQASEIVEYEEDAHITFAILDAVNGNIEDAVTAFESIKSV 677

Query: 532 PDYNPEGKVTKRKHDNEGSGSKRPKVEYSEEELKTHISK 570
             Y     +  RK ++  + +  P+    +EE + +++K
Sbjct: 678 VSYWNLALIFHRKAEDIENDALSPE---EQEECRNYLTK 713


>gi|14043024 BCL2-associated athanogene 3 [Homo sapiens]
          Length = 575

 Score = 30.0 bits (66), Expect = 6.5
 Identities = 25/96 (26%), Positives = 46/96 (47%), Gaps = 19/96 (19%)

Query: 440 ADDKRKMPFTEKIMATPEQVG------------KMKAIVEKLRFTYRS-DSFENP----- 481
           A ++R  P T    ATP + G            K++AI+EK++   ++ D+FE       
Sbjct: 391 ATEERAAPSTAPAEATPPKPGEAEAPPKHPGVLKVEAILEKVQGLEQAVDNFEGKKTDKK 450

Query: 482 -VLQQHFRNLEALALDLMEPEQAVDLTLPKVEAMNK 516
            ++ + +   E LALD ++PE   D+   + + + K
Sbjct: 451 YLMIEEYLTKELLALDSVDPEGRADVRQARRDGVRK 486


>gi|11415048 nucleosome assembly protein 1-like 2 [Homo sapiens]
          Length = 460

 Score = 30.0 bits (66), Expect = 6.5
 Identities = 13/28 (46%), Positives = 21/28 (75%), Gaps = 1/28 (3%)

Query: 3   GWESYYKTEG-DEEAEEEQEENLEASGD 29
           G+E YY     +EE EEE+E+++EA+G+
Sbjct: 202 GYEDYYYDYAVEEEEEEEEEDDIEATGE 229


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.316    0.135    0.381 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,693,075
Number of Sequences: 37866
Number of extensions: 1098546
Number of successful extensions: 4899
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 4866
Number of HSP's gapped (non-prelim): 57
length of query: 609
length of database: 18,247,518
effective HSP length: 108
effective length of query: 501
effective length of database: 14,157,990
effective search space: 7093152990
effective search space used: 7093152990
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 65 (29.6 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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