Guide to the Human Genome
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Name: EIF4EBP3 Sequence: fasta or formatted (100aa) NCBI GI: 4503537
Description:

eukaryotic translation initiation factor 4E binding protein 3

Referenced in:

Translation Factors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.0          4           1
 C cysteine            5.0          5           2
 D aspartate           6.0          6           2
 E glutamate           9.0          9           3
 F phenylalanine       2.0          2           1
 G glycine             7.0          7           2
 H histidine           0.0          0           0
 I isoleucine          7.0          7           2
 K lysine              4.0          4           1
 L leucine             8.0          8           2
 M methionine          2.0          2           1
 N asparagine          1.0          1           1
 P proline            14.0         14           2
 Q glutamine           4.0          4           1
 R arginine            4.0          4           1
 S serine              6.0          6           1
 T threonine          13.0         13           2
 V valine              1.0          1           1
 W tryptophan          0.0          0           0
 Y tyrosine            3.0          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   eukaryotic translation initiation factor 4E binding p... 
EIF4EBP2              0.466   eukaryotic translation initiation factor 4E binding p...
EIF4EBP1              0.402   eukaryotic translation initiation factor 4E binding p...
LOC283999             0.026   hypothetical protein LOC283999 
COL18A1               0.026   alpha 1 type XVIII collagen isoform 3 precursor [Ho...
COL18A1               0.026   alpha 1 type XVIII collagen isoform 2 precursor [Ho...
COL18A1               0.026   alpha 1 type XVIII collagen isoform 1 precursor [Ho...
FLRT2                 0.026   fibronectin leucine rich transmembrane protein 2 [Hom...
DMRTC2                0.026   DMRT-like family C2 
MINK1                 0.021   misshapen/NIK-related kinase isoform 4 
MINK1                 0.021   misshapen/NIK-related kinase isoform 2 
MINK1                 0.021   misshapen/NIK-related kinase isoform 3 
MINK1                 0.021   misshapen/NIK-related kinase isoform 1 
LIMD1                 0.021   LIM domains containing 1 
BCCIP                 0.021   BRCA2 and CDKN1A-interacting protein isoform C [Homo...
BCCIP                 0.021   BRCA2 and CDKN1A-interacting protein isoform BCCIPbe...
BCCIP                 0.021   BRCA2 and CDKN1A-interacting protein isoform BCCIPalp...
TNRC18                0.016   trinucleotide repeat containing 18 
SETD1B                0.016   SET domain containing 1B 
ARHGAP23              0.016   Rho GTPase activating protein 23 
WIZ                   0.016   widely-interspaced zinc finger motifs 
NEUROD6               0.011   neurogenic differentiation 6 
NOS2                  0.011   nitric oxide synthase 2A 
TRIB3                 0.011   tribbles 3 
TET3                  0.011   tet oncogene family member 3 
EPB41                 0.011   erythrocyte membrane protein band 4.1 (elliptocytosi...
BAT3                  0.011   HLA-B associated transcript-3 isoform b 
BAT3                  0.011   HLA-B associated transcript-3 isoform b 
BAT3                  0.011   HLA-B associated transcript-3 isoform b 
CAMK2B                0.011   calcium/calmodulin-dependent protein kinase II beta ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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