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Search of human proteins with 4503481
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4503481 eukaryotic translation elongation factor 1 gamma
[Homo sapiens]
(437 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4503481 eukaryotic translation elongation factor 1 gamma [Hom... 902 0.0
gi|5454158 valyl-tRNA synthetase [Homo sapiens] 130 3e-30
gi|151301171 RNA polymerase II transcription factor TAFII140 [Ho... 42 8e-04
gi|4504187 glutathione S-transferase theta 2 [Homo sapiens] 41 0.002
gi|124249394 glutathione S-transferase theta 2B [Homo sapiens] 41 0.002
gi|69354671 ATP-binding cassette, sub-family F, member 1 isoform... 41 0.002
gi|4758862 eukaryotic translation elongation factor 1 epsilon 1 ... 40 0.003
gi|7657457 prostaglandin-D synthase [Homo sapiens] 39 0.007
gi|31324577 molecule interacting with Rab13 [Homo sapiens] 38 0.016
gi|30795231 brain abundant, membrane attached signal protein 1 [... 38 0.021
gi|14043022 methionyl-tRNA synthetase [Homo sapiens] 38 0.021
gi|215490056 meningioma expressed antigen 5 (hyaluronidase) isof... 38 0.021
gi|11024698 meningioma expressed antigen 5 (hyaluronidase) isofo... 38 0.021
gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens] 37 0.035
gi|153945728 microtubule-associated protein 1B [Homo sapiens] 37 0.035
gi|239756270 PREDICTED: StAR-related lipid transfer (START) doma... 37 0.046
gi|239750815 PREDICTED: StAR-related lipid transfer (START) doma... 37 0.046
gi|239745175 PREDICTED: StAR-related lipid transfer (START) doma... 37 0.046
gi|7657218 bromodomain-containing protein 4 isoform short [Homo ... 36 0.060
gi|19718731 bromodomain-containing protein 4 isoform long [Homo ... 36 0.060
gi|21389423 junctional sarcoplasmic reticulum protein 1 [Homo sa... 36 0.060
gi|48255891 protein kinase C substrate 80K-H isoform 2 [Homo sap... 35 0.10
gi|155369221 potassium channel tetramerisation domain containing... 35 0.13
gi|190014588 PC4 and SFRS1 interacting protein 1 isoform 2 [Homo... 35 0.18
gi|190014586 PC4 and SFRS1 interacting protein 1 isoform 1 [Homo... 35 0.18
gi|19923653 PC4 and SFRS1 interacting protein 1 isoform 2 [Homo ... 35 0.18
gi|239508778 PREDICTED: hypothetical protein, partial [Homo sapi... 35 0.18
gi|21389511 zinc finger, matrin type 2 [Homo sapiens] 35 0.18
gi|239756241 PREDICTED: golgi autoantigen, golgin subfamily a-li... 34 0.23
gi|208879470 eukaryotic translation elongation factor 1 epsilon ... 34 0.23
>gi|4503481 eukaryotic translation elongation factor 1 gamma [Homo
sapiens]
Length = 437
Score = 902 bits (2331), Expect = 0.0
Identities = 437/437 (100%), Positives = 437/437 (100%)
Query: 1 MAAGTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTNRTPEFLRKFPAGKVPA 60
MAAGTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTNRTPEFLRKFPAGKVPA
Sbjct: 1 MAAGTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTNRTPEFLRKFPAGKVPA 60
Query: 61 FEGDDGFCVFESNAIAYYVSNEELRGSTPEAAAQVVQWVSFADSDIVPPASTWVFPTLGI 120
FEGDDGFCVFESNAIAYYVSNEELRGSTPEAAAQVVQWVSFADSDIVPPASTWVFPTLGI
Sbjct: 61 FEGDDGFCVFESNAIAYYVSNEELRGSTPEAAAQVVQWVSFADSDIVPPASTWVFPTLGI 120
Query: 121 MHHNKQATENAKEEVRRILGLLDAYLKTRTFLVGERVTLADITVVCTLLWLYKQVLEPSF 180
MHHNKQATENAKEEVRRILGLLDAYLKTRTFLVGERVTLADITVVCTLLWLYKQVLEPSF
Sbjct: 121 MHHNKQATENAKEEVRRILGLLDAYLKTRTFLVGERVTLADITVVCTLLWLYKQVLEPSF 180
Query: 181 RQAFPNTNRWFLTCINQPQFRAVLGEVKLCEKMAQFDAKKFAETQPKKDTPRKEKGSREE 240
RQAFPNTNRWFLTCINQPQFRAVLGEVKLCEKMAQFDAKKFAETQPKKDTPRKEKGSREE
Sbjct: 181 RQAFPNTNRWFLTCINQPQFRAVLGEVKLCEKMAQFDAKKFAETQPKKDTPRKEKGSREE 240
Query: 241 KQKPQAERKEEKKAAAPAPEEEMDECEQALAAEPKAKDPFAHLPKSTFVLDEFKRKYSNE 300
KQKPQAERKEEKKAAAPAPEEEMDECEQALAAEPKAKDPFAHLPKSTFVLDEFKRKYSNE
Sbjct: 241 KQKPQAERKEEKKAAAPAPEEEMDECEQALAAEPKAKDPFAHLPKSTFVLDEFKRKYSNE 300
Query: 301 DTLSVALPYFWEHFDKDGWSLWYSEYRFPEELTQTFMSCNLITGMFQRLDKLRKNAFASV 360
DTLSVALPYFWEHFDKDGWSLWYSEYRFPEELTQTFMSCNLITGMFQRLDKLRKNAFASV
Sbjct: 301 DTLSVALPYFWEHFDKDGWSLWYSEYRFPEELTQTFMSCNLITGMFQRLDKLRKNAFASV 360
Query: 361 ILFGTNNSSSISGVWVFRGQELAFPLSPDWQVDYESYTWRKLDPGSEETQTLVREYFSWE 420
ILFGTNNSSSISGVWVFRGQELAFPLSPDWQVDYESYTWRKLDPGSEETQTLVREYFSWE
Sbjct: 361 ILFGTNNSSSISGVWVFRGQELAFPLSPDWQVDYESYTWRKLDPGSEETQTLVREYFSWE 420
Query: 421 GAFQHVGKAFNQGKIFK 437
GAFQHVGKAFNQGKIFK
Sbjct: 421 GAFQHVGKAFNQGKIFK 437
>gi|5454158 valyl-tRNA synthetase [Homo sapiens]
Length = 1264
Score = 130 bits (326), Expect = 3e-30
Identities = 97/292 (33%), Positives = 149/292 (51%), Gaps = 41/292 (14%)
Query: 5 TLYT--YPENWRAFKALIAAQYS---------GAQVRVLSAPPHFHFGQTNRTPEFLRKF 53
TLY +P+ + + +ALIAA+Y GA R+ PP T+RTP F
Sbjct: 3 TLYVSPHPDAFPSLRALIAARYGEAGEGPGWGGAHPRICLQPP-----PTSRTP-----F 52
Query: 54 PAGKVPAFE-GDDGFCVFESNAIAYYVSNEELRGSTPEAAAQVVQ-WVSFADSDIVPPAS 111
P ++PA E G G V+ + A+A + L G AA +VQ WVS+AD++++P A
Sbjct: 53 PPPRLPALEQGPGGLWVWGATAVAQLLWPAGLGGPGGSRAAVLVQQWVSYADTELIPAAC 112
Query: 112 TWVFPTLGIMHHNKQATENAKEEVRRILGLLDAYLKTRTFLVGERVTLADITVVCTLLWL 171
P LG+ + Q + + R L L+ +L+ T+L GE TLAD+ V LL
Sbjct: 113 GATLPALGL-RSSAQDPQAVLGALGRALSPLEEWLRLHTYLAGEAPTLADLAAVTALLLP 171
Query: 172 YKQVLEPSFRQAFPNTNRWFLTCINQPQFRAVLGEVKLCEKMAQFDAKKFAETQPKKDTP 231
++ VL+P R+ + N RWF+TC+ QP+FRAVLGEV L + + QP + P
Sbjct: 172 FRYVLDPPARRIWNNVTRWFVTCVRQPEFRAVLGEVVL------YSGARPLSHQPGPEAP 225
Query: 232 ---------RKEKGSREEKQKPQAERKEEKKAAAPAPEEEMDECEQALAAEP 274
+KE RE+ +K Q ++K +++ P P E+ + E+ +P
Sbjct: 226 ALPKTAAQLKKEAKKREKLEKFQQKQKIQQQ--QPPPGEKKPKPEKREKRDP 275
>gi|151301171 RNA polymerase II transcription factor TAFII140 [Homo
sapiens]
Length = 929
Score = 42.4 bits (98), Expect = 8e-04
Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 209 LCEKMAQFDAKKFAETQPKKDTPRKEKGSREEKQKPQAERKEEKKAAAPAPEEEMDECEQ 268
L EK+ + + +K E + KKD K+K +EK+K + ER++EK+ +E+ +
Sbjct: 685 LPEKLFE-EKEKVKEKEKKKDKKEKKKKKEKEKEKKEKEREKEKREREKREKEKEKHKHE 743
Query: 269 ALAAEPKAKDPFAHLPKST 287
+ EP A P +P+ T
Sbjct: 744 KIKVEPVALAPSPVIPRLT 762
Score = 31.2 bits (69), Expect = 1.9
Identities = 24/94 (25%), Positives = 44/94 (46%)
Query: 199 QFRAVLGEVKLCEKMAQFDAKKFAETQPKKDTPRKEKGSREEKQKPQAERKEEKKAAAPA 258
+F V +VKL + + + + +K + + ++ +K+K RE+++ R+++ KA AP
Sbjct: 594 EFEDVDPKVKLKDGLVRKEKEKHKDKKKDREKGKKDKDKREKEKVKDKGREDKMKAPAPP 653
Query: 259 PEEEMDECEQALAAEPKAKDPFAHLPKSTFVLDE 292
E L + A A LP VL E
Sbjct: 654 LVLPPKELALPLFSPATASRVPAMLPSLLPVLPE 687
>gi|4504187 glutathione S-transferase theta 2 [Homo sapiens]
Length = 244
Score = 41.2 bits (95), Expect = 0.002
Identities = 36/136 (26%), Positives = 66/136 (48%), Gaps = 11/136 (8%)
Query: 44 NRTPEFLRKFPAGKVPAFEGDDGFCVFESNAIAYYVS-----NEELRGSTPEAAAQVVQW 98
+++ EFL+ GK+P + D F + ES+AI Y+S + S +A A+V ++
Sbjct: 40 HKSKEFLQINSLGKLPTLKDGD-FILTESSAILIYLSCKYQTPDHWYPSDLQARARVHEY 98
Query: 99 VSFADSDI-----VPPASTWVFPTLGIMHHNKQATENAKEEVRRILGLLDAYLKTRTFLV 153
+ + I +P + P +G+ ++ N + + L D +L R FL
Sbjct: 99 LGWHADCIRGTFGIPLWVQVLGPLIGVQVPEEKVERNRTAMDQALQWLEDKFLGDRPFLA 158
Query: 154 GERVTLADITVVCTLL 169
G++VTLAD+ + L+
Sbjct: 159 GQQVTLADLMALEELM 174
>gi|124249394 glutathione S-transferase theta 2B [Homo sapiens]
Length = 244
Score = 41.2 bits (95), Expect = 0.002
Identities = 36/136 (26%), Positives = 66/136 (48%), Gaps = 11/136 (8%)
Query: 44 NRTPEFLRKFPAGKVPAFEGDDGFCVFESNAIAYYVS-----NEELRGSTPEAAAQVVQW 98
+++ EFL+ GK+P + D F + ES+AI Y+S + S +A A+V ++
Sbjct: 40 HKSKEFLQINSLGKLPTLKDGD-FILTESSAILIYLSCKYQTPDHWYPSDLQARARVHEY 98
Query: 99 VSFADSDI-----VPPASTWVFPTLGIMHHNKQATENAKEEVRRILGLLDAYLKTRTFLV 153
+ + I +P + P +G+ ++ N + + L D +L R FL
Sbjct: 99 LGWHADCIRGTFGIPLWVQVLGPLIGVQVPEEKVERNRTAMDQALQWLEDKFLGDRPFLA 158
Query: 154 GERVTLADITVVCTLL 169
G++VTLAD+ + L+
Sbjct: 159 GQQVTLADLMALEELM 174
>gi|69354671 ATP-binding cassette, sub-family F, member 1 isoform a
[Homo sapiens]
Length = 845
Score = 40.8 bits (94), Expect = 0.002
Identities = 35/108 (32%), Positives = 57/108 (52%), Gaps = 7/108 (6%)
Query: 181 RQAFPNTNRWFLTCINQPQFRAVLGEVKLCEKMAQFDAK---KFAETQPKKDTPRKEKGS 237
+ A P NR +++ Q A+ G+ K E+ ++ AK KFA +++ KE+
Sbjct: 152 KPAKPEKNR-INKAVSEEQQPALKGK-KGKEEKSKGKAKPQNKFAALDNEEED--KEEEI 207
Query: 238 REEKQKPQAERKEEKKAAAPAPEEEMDECEQALAAEPKAKDPFAHLPK 285
+EK+ P+ +++ KKA + EE E E+ E KA DP+AHL K
Sbjct: 208 IKEKEPPKQGKEKAKKAEQGSEEEGEGEEEEEEGGESKADDPYAHLSK 255
>gi|4758862 eukaryotic translation elongation factor 1 epsilon 1
isoform 1 [Homo sapiens]
Length = 174
Score = 40.4 bits (93), Expect = 0.003
Identities = 36/157 (22%), Positives = 70/157 (44%), Gaps = 29/157 (18%)
Query: 57 KVPAFEGDDGFCVFESNAIAYYV----SNEELRGSTPEAAAQVVQWVSFADSDIVPPAST 112
++P + ++G + IA ++ + E L GST E A V QW+ + + + +S
Sbjct: 29 QIPVLQTNNGPSLTGLTTIAAHLVKQANKEYLLGSTAEEKAIVQQWLEYRVTQVDGHSS- 87
Query: 113 WVFPTLGIMHHNKQATENAKEEVRRILGLLDAYLKTRTFLVGERVTLADITVVCTLLWLY 172
K ++ +L L++YL+ + +L G TLADI + L+
Sbjct: 88 -------------------KNDIHTLLKDLNSYLEDKVYLTGYNFTLADILL---YYGLH 125
Query: 173 KQVLEPSF--RQAFPNTNRWFLTCINQPQFRAVLGEV 207
+ +++ + ++ + N +RWF + P R L V
Sbjct: 126 RFIVDLTVQEKEKYLNVSRWFCHIQHYPGIRQHLSSV 162
>gi|7657457 prostaglandin-D synthase [Homo sapiens]
Length = 199
Score = 39.3 bits (90), Expect = 0.007
Identities = 40/132 (30%), Positives = 57/132 (43%), Gaps = 12/132 (9%)
Query: 47 PEFLRKFPAGKVPAFEGDDGFCVFESNAIAYYVS-NEELRGSTPEAAAQVVQWVSFADSD 105
PE P GK+P E D G + +S AIA Y++ N +L G+T V V D
Sbjct: 40 PEIKSTLPFGKIPILEVD-GLTLHQSLAIARYLTKNTDLAGNTEMEQCHVDAIVDTLDDF 98
Query: 106 IVPPASTWVFPTLGIMHH--NKQATENAKEEVRRILGLLDAYLKTRTFLVGERVTLADI- 162
+ W + N+ T NA ++ LD YL R +L+G VT AD
Sbjct: 99 M--SCFPWAEKKQDVKEQMFNELLTYNAPH----LMQDLDTYLGGREWLIGNSVTWADFY 152
Query: 163 -TVVCTLLWLYK 173
+ T L ++K
Sbjct: 153 WEICSTTLLVFK 164
>gi|31324577 molecule interacting with Rab13 [Homo sapiens]
Length = 863
Score = 38.1 bits (87), Expect = 0.016
Identities = 23/62 (37%), Positives = 30/62 (48%)
Query: 226 PKKDTPRKEKGSREEKQKPQAERKEEKKAAAPAPEEEMDECEQALAAEPKAKDPFAHLPK 285
P +D+ + E G EE +P E K P EEE D+ E+A AA A P P+
Sbjct: 395 PSQDSRQVENGGTEEVAQPSPTASLESKPYNPFEEEEEDKEEEAPAAPSLATSPALGHPE 454
Query: 286 ST 287
ST
Sbjct: 455 ST 456
>gi|30795231 brain abundant, membrane attached signal protein 1
[Homo sapiens]
Length = 227
Score = 37.7 bits (86), Expect = 0.021
Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Query: 206 EVKLCEKMAQFDAKKFAETQPKKDTPRKEKGSREEKQKPQAERKEEKKAAAPAPEEEMDE 265
E K EK + DA E PK + P K +G+ E K +P ++E+ A PA E +
Sbjct: 63 EGKAEEKEGEKDAAAAKEEAPKAE-PEKTEGAAEAKAEPPKAPEQEQAAPGPAAGGEAPK 121
Query: 266 CEQALAAEPKAKDPFA 281
+A AA ++ P A
Sbjct: 122 AAEAAAAPAESAAPAA 137
Score = 29.6 bits (65), Expect = 5.6
Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 20/89 (22%)
Query: 211 EKMAQFDAKKFAETQPKKDTPRKEKG--------SREEKQKP------QAERKEEKKAAA 256
EK + D K ++ TP++ + ++E K+KP +AE KE +K AA
Sbjct: 17 EKAKEKDKKAEGAATEEEGTPKESEPQAAAEPAEAKEGKEKPDQDAEGKAEEKEGEKDAA 76
Query: 257 PAPEE----EMDECEQALAAEPKAKDPFA 281
A EE E ++ E A AE KA+ P A
Sbjct: 77 AAKEEAPKAEPEKTEGA--AEAKAEPPKA 103
Score = 29.3 bits (64), Expect = 7.4
Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 8/91 (8%)
Query: 196 NQPQFRAVLGEVKLCEKMAQFDAKKFAETQPKKDTPRKEKGSREEKQKPQAERKE---EK 252
++PQ A E K ++ DA+ AE +K+ + ++EE K + E+ E E
Sbjct: 40 SEPQAAAEPAEAKEGKEKPDQDAEGKAE---EKEGEKDAAAAKEEAPKAEPEKTEGAAEA 96
Query: 253 KAAAP-APEEEMDECEQALAAE-PKAKDPFA 281
KA P APE+E A E PKA + A
Sbjct: 97 KAEPPKAPEQEQAAPGPAAGGEAPKAAEAAA 127
>gi|14043022 methionyl-tRNA synthetase [Homo sapiens]
Length = 900
Score = 37.7 bits (86), Expect = 0.021
Identities = 49/205 (23%), Positives = 86/205 (41%), Gaps = 20/205 (9%)
Query: 57 KVPAFEGDDGFCVFESNAIAYYVSNEELRGSTPEAAAQVVQWVSFADSDIVPPASTWVFP 116
KVP + D G +F ++AI Y S E QW+ + +++ P S ++
Sbjct: 47 KVPVLQLDSGNYLFSTSAICRYF----FLLSGWEQDDLTNQWLEWEATELQPALSAALY- 101
Query: 117 TLGIMHHNKQATENAKEEVRRILGLLDAYLKTRT--FLVGERVTLADITVVCTLLW--LY 172
++ K+ E+ VRR L +D L + FL GE +LADI +LW LY
Sbjct: 102 --YLVVQGKKG-EDVLGSVRRALTHIDHSLSRQNCPFLAGETESLADI-----VLWGALY 153
Query: 173 KQVLEPSF-RQAFPNTNRWFLTCINQPQFRAVLGEVKLCEKMAQFDAKKFAETQPKKDTP 231
+ +P++ + + WF T Q + V ++ + + + QP+
Sbjct: 154 PLLQDPAYLPEELSALHSWFQTLSTQEPCQRAAETV--LKQQGVLALRPYLQKQPQPSPA 211
Query: 232 RKEKGSREEKQKPQAERKEEKKAAA 256
+ E +++ A EE+ A A
Sbjct: 212 EGRAVTNEPEEEELATLSEEEIAMA 236
>gi|215490056 meningioma expressed antigen 5 (hyaluronidase) isoform
b [Homo sapiens]
Length = 863
Score = 37.7 bits (86), Expect = 0.021
Identities = 38/165 (23%), Positives = 62/165 (37%), Gaps = 26/165 (15%)
Query: 196 NQPQFRAVLGEVKLCEKMAQFDAKKFAETQPKKDTPRKEKGSREEKQKPQAERKEEKKAA 255
N Q + + E K+ E++ D K + + K ++ + Q + + K+
Sbjct: 426 NDNQILSEIVEAKMAEELKPMDTDKESIAESKSPEMSMQEDCISDIAPMQTDEQTNKEQF 485
Query: 256 APAPEEEMDECEQALAAEPKAKD-----------PFAHLPKSTFVLDEFKRKYSNEDTLS 304
P P E+ AEP + P+ H PK +L EF+ +N +S
Sbjct: 486 VPGPNEK-----PLYTAEPVTLEDLQLLADLFYLPYEHGPKGAQMLREFQWLRANSSVVS 540
Query: 305 VALPYFWEHFDKDGWSLWYSEYRFPEELTQTFMSCNLITGMFQRL 349
V + D + W S EE+ C L+ GMF RL
Sbjct: 541 VNC----KGKDSEKIEEWRSRAAKFEEM------CGLVMGMFTRL 575
>gi|11024698 meningioma expressed antigen 5 (hyaluronidase) isoform
a [Homo sapiens]
Length = 916
Score = 37.7 bits (86), Expect = 0.021
Identities = 38/165 (23%), Positives = 62/165 (37%), Gaps = 26/165 (15%)
Query: 196 NQPQFRAVLGEVKLCEKMAQFDAKKFAETQPKKDTPRKEKGSREEKQKPQAERKEEKKAA 255
N Q + + E K+ E++ D K + + K ++ + Q + + K+
Sbjct: 479 NDNQILSEIVEAKMAEELKPMDTDKESIAESKSPEMSMQEDCISDIAPMQTDEQTNKEQF 538
Query: 256 APAPEEEMDECEQALAAEPKAKD-----------PFAHLPKSTFVLDEFKRKYSNEDTLS 304
P P E+ AEP + P+ H PK +L EF+ +N +S
Sbjct: 539 VPGPNEK-----PLYTAEPVTLEDLQLLADLFYLPYEHGPKGAQMLREFQWLRANSSVVS 593
Query: 305 VALPYFWEHFDKDGWSLWYSEYRFPEELTQTFMSCNLITGMFQRL 349
V + D + W S EE+ C L+ GMF RL
Sbjct: 594 VNC----KGKDSEKIEEWRSRAAKFEEM------CGLVMGMFTRL 628
>gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens]
Length = 1020
Score = 37.0 bits (84), Expect = 0.035
Identities = 28/88 (31%), Positives = 40/88 (45%), Gaps = 15/88 (17%)
Query: 206 EVKLCEKMAQFDAKKFAETQPKKDTPRKE--------------KGSREEKQKPQAERKEE 251
EVK EK A+ AK+ A++ P+ +P KE K +E+ K AE K
Sbjct: 543 EVKSPEK-AKSPAKEEAKSPPEAKSPEKEEAKSPAEVKSPEKAKSPAKEEAKSPAEAKSP 601
Query: 252 KKAAAPAPEEEMDECEQALAAEPKAKDP 279
+KA +P EE E + +AK P
Sbjct: 602 EKAKSPVKEEAKSPAEAKSPVKEEAKSP 629
Score = 37.0 bits (84), Expect = 0.035
Identities = 40/120 (33%), Positives = 57/120 (47%), Gaps = 22/120 (18%)
Query: 206 EVKLCEKMAQFDAKKFAETQPKKDTPRKE--KGSREEKQKPQAER--------KEEKKAA 255
EVK EK A+ K+ A+ P+K+ P+KE K +E++KPQ + +EEK A
Sbjct: 792 EVKSPEK-AKSPLKEDAKA-PEKEIPKKEEVKSPVKEEEKPQEVKVKEPPKKAEEEKAPA 849
Query: 256 APAPEEEMD----ECEQALAAEPKA---KDPFAHLPKSTFVLDEFKRKYSNEDTLSVALP 308
P EE+ D E + A +PK K+P PK + V +K ED V P
Sbjct: 850 TPKTEEKKDSKKEEAPKKEAPKPKVEEKKEPAVEKPKESKV---EAKKEEAEDKKKVPTP 906
Score = 36.2 bits (82), Expect = 0.060
Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 9/89 (10%)
Query: 206 EVKLCEKMAQFDAKKFAETQPKKDTPRKEKGSREEKQKP--QAERKEEKKAAAP------ 257
EVK EK A+ K+ A++ K +P KE+ EK K +AE K +KA +P
Sbjct: 631 EVKSPEK-AKSPTKEEAKSPEKAKSPEKEEAKSPEKAKSPVKAEAKSPEKAKSPVKAEAK 689
Query: 258 APEEEMDECEQALAAEPKAKDPFAHLPKS 286
+PE+ ++ + KAK P KS
Sbjct: 690 SPEKAKSPVKEEAKSPEKAKSPVKEEAKS 718
Score = 34.7 bits (78), Expect = 0.18
Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 7/99 (7%)
Query: 206 EVKLCE---KMAQFDAKKFAETQPKKDTPRKEKGSREEKQKPQAERKEEKKAAAPAPEEE 262
EVK+ E K + A +T+ KKD+ +KE+ ++E KP+ E E+K+ A P+E
Sbjct: 832 EVKVKEPPKKAEEEKAPATPKTEEKKDS-KKEEAPKKEAPKPKVE--EKKEPAVEKPKES 888
Query: 263 MDECEQALAAE-PKAKDPFAHLPKSTFVLDEFKRKYSNE 300
E ++ A + K P P V ++ K K E
Sbjct: 889 KVEAKKEEAEDKKKVPTPEKEAPAKVEVKEDAKPKEKTE 927
Score = 33.9 bits (76), Expect = 0.30
Identities = 21/80 (26%), Positives = 38/80 (47%)
Query: 207 VKLCEKMAQFDAKKFAETQPKKDTPRKEKGSREEKQKPQAERKEEKKAAAPAPEEEMDEC 266
V+ EK ++ ETQ ++ +E+ +E++ + E EE++A E +
Sbjct: 447 VEKSEKETVIVEEQTEETQVTEEVTEEEEKEAKEEEGKEEEGGEEEEAEGGEEETKSPPA 506
Query: 267 EQALAAEPKAKDPFAHLPKS 286
E+A + E +AK P KS
Sbjct: 507 EEAASPEKEAKSPVKEEAKS 526
Score = 33.1 bits (74), Expect = 0.51
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Query: 206 EVKLCEKMAQFDAKKFAETQPKKDTPRKEKGSREEKQKPQAERKEEKKAAAPAPEEEMDE 265
EVK EK A+ AK+ A++ + +P K K +E+ K AE K K A +P E
Sbjct: 577 EVKSPEK-AKSPAKEEAKSPAEAKSPEKAKSPVKEEAKSPAEAKSPVKEEAKSPAEVKSP 635
Query: 266 CEQALAAEPKAKDP 279
+ + +AK P
Sbjct: 636 EKAKSPTKEEAKSP 649
Score = 32.7 bits (73), Expect = 0.67
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 218 AKKFAETQPKKDTPRKEKGSREEKQKPQAERKEEKKAAAPAPEE-EMDECEQALAAEPKA 276
A+K KKDT ++ EEK K +A+ KE+ K + P + + ++ E++ + + K
Sbjct: 945 AEKKEAAPEKKDTKEEKAKKPEEKPKTEAKAKEDDKTLSKEPSKPKAEKAEKSSSTDQKD 1004
Query: 277 KDP 279
P
Sbjct: 1005 SKP 1007
Score = 32.3 bits (72), Expect = 0.87
Identities = 19/69 (27%), Positives = 33/69 (47%)
Query: 211 EKMAQFDAKKFAETQPKKDTPRKEKGSREEKQKPQAERKEEKKAAAPAPEEEMDECEQAL 270
E+ A + + + + + +P + K +E+ K AE K +KA +PA EE E
Sbjct: 507 EEAASPEKEAKSPVKEEAKSPAEAKSPEKEEAKSPAEVKSPEKAKSPAKEEAKSPPEAKS 566
Query: 271 AAEPKAKDP 279
+ +AK P
Sbjct: 567 PEKEEAKSP 575
Score = 31.6 bits (70), Expect = 1.5
Identities = 27/98 (27%), Positives = 45/98 (45%), Gaps = 17/98 (17%)
Query: 206 EVKLCEKMAQFDAKKFAETQPKKDTPRKEK---GSREEKQKPQAER------------KE 250
E ++ E++ + + K+ E + K++ +E+ G EE + P AE KE
Sbjct: 463 ETQVTEEVTEEEEKEAKEEEGKEEEGGEEEEAEGGEEETKSPPAEEAASPEKEAKSPVKE 522
Query: 251 EKK--AAAPAPEEEMDECEQALAAEPKAKDPFAHLPKS 286
E K A A +PE+E + + + KAK P KS
Sbjct: 523 EAKSPAEAKSPEKEEAKSPAEVKSPEKAKSPAKEEAKS 560
Score = 31.6 bits (70), Expect = 1.5
Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 9/73 (12%)
Query: 222 AETQPKKDTPRKEKGSREEKQKPQAERKE-----EKKAAAP----APEEEMDECEQALAA 272
A+ + K+D KEK +K+ A+ KE EKK AAP EE+ + E+
Sbjct: 912 AKVEVKEDAKPKEKTEVAKKEPDDAKAKEPSKPAEKKEAAPEKKDTKEEKAKKPEEKPKT 971
Query: 273 EPKAKDPFAHLPK 285
E KAK+ L K
Sbjct: 972 EAKAKEDDKTLSK 984
Score = 31.2 bits (69), Expect = 1.9
Identities = 19/73 (26%), Positives = 33/73 (45%)
Query: 214 AQFDAKKFAETQPKKDTPRKEKGSREEKQKPQAERKEEKKAAAPAPEEEMDECEQALAAE 273
A+ K+ A++ + +P K K +E+ K + K +K A +PE+ + +
Sbjct: 618 AKSPVKEEAKSPAEVKSPEKAKSPTKEEAKSPEKAKSPEKEEAKSPEKAKSPVKAEAKSP 677
Query: 274 PKAKDPFAHLPKS 286
KAK P KS
Sbjct: 678 EKAKSPVKAEAKS 690
Score = 30.8 bits (68), Expect = 2.5
Identities = 21/85 (24%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 195 INQPQFRAVLGEVKLCEKMAQFDAKKFAETQPKKDTPRKEKGSREEKQKPQAERKEEKKA 254
+ + + V+ E + E + + E + K++ ++E+G EE +AE EE+
Sbjct: 447 VEKSEKETVIVEEQTEETQVTEEVTEEEEKEAKEEEGKEEEGGEEE----EAEGGEEETK 502
Query: 255 AAPAPEEEMDECEQALAAEPKAKDP 279
+ PA E E E + +AK P
Sbjct: 503 SPPAEEAASPEKEAKSPVKEEAKSP 527
Score = 30.8 bits (68), Expect = 2.5
Identities = 31/101 (30%), Positives = 45/101 (44%), Gaps = 13/101 (12%)
Query: 212 KMAQFDAKKF-AETQPKKDTPRKEKGSREE-------KQKPQAERKEEKKAAAPAPEEEM 263
K ++ +AKK AE + K TP KE ++ E K+K + +KE A A P +
Sbjct: 886 KESKVEAKKEEAEDKKKVPTPEKEAPAKVEVKEDAKPKEKTEVAKKEPDDAKAKEPSKPA 945
Query: 264 DECEQAL----AAEPKAKDPFAHLPKSTFVLDEFKRKYSNE 300
++ E A E KAK P PK+ E + S E
Sbjct: 946 EKKEAAPEKKDTKEEKAKKP-EEKPKTEAKAKEDDKTLSKE 985
Score = 30.8 bits (68), Expect = 2.5
Identities = 29/96 (30%), Positives = 42/96 (43%), Gaps = 11/96 (11%)
Query: 217 DAKKFAETQPKKDTP----RKEKGSREEKQKPQAERKEEKKAAAPAPEE------EMDEC 266
DAK +T+ K P KE EK++ E+K+ K+ A PEE + E
Sbjct: 919 DAKPKEKTEVAKKEPDDAKAKEPSKPAEKKEAAPEKKDTKEEKAKKPEEKPKTEAKAKED 978
Query: 267 EQALAAEP-KAKDPFAHLPKSTFVLDEFKRKYSNED 301
++ L+ EP K K A ST D + + ED
Sbjct: 979 DKTLSKEPSKPKAEKAEKSSSTDQKDSKPPEKATED 1014
Score = 29.6 bits (65), Expect = 5.6
Identities = 18/66 (27%), Positives = 31/66 (46%)
Query: 214 AQFDAKKFAETQPKKDTPRKEKGSREEKQKPQAERKEEKKAAAPAPEEEMDECEQALAAE 273
A+ K+ A++ + +P K K +E+ K E K +K A +P E + A+
Sbjct: 530 AKSPEKEEAKSPAEVKSPEKAKSPAKEEAKSPPEAKSPEKEEAKSPAEVKSPEKAKSPAK 589
Query: 274 PKAKDP 279
+AK P
Sbjct: 590 EEAKSP 595
Score = 29.6 bits (65), Expect = 5.6
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 9/82 (10%)
Query: 206 EVKLCEKMAQFDAKKFAETQPKKDTPRKEKGSREEKQKP--QAERKEEKKAAAP------ 257
E K EK A+ K+ A++ K +P K + EK K +AE K +KA +P
Sbjct: 645 EAKSPEK-AKSPEKEEAKSPEKAKSPVKAEAKSPEKAKSPVKAEAKSPEKAKSPVKEEAK 703
Query: 258 APEEEMDECEQALAAEPKAKDP 279
+PE+ ++ + KAK P
Sbjct: 704 SPEKAKSPVKEEAKSPEKAKSP 725
Score = 29.6 bits (65), Expect = 5.6
Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 5/84 (5%)
Query: 206 EVKLCEKMAQFDAKKFAETQPKKDTPRKEKGSREEKQKP--QAERKEEKKAAAPAPEEEM 263
E K EK A+ K+ A++ K +P KE+ EK K + E K +KA +P + +
Sbjct: 701 EAKSPEK-AKSPVKEEAKSPEKAKSPVKEEAKTPEKAKSPVKEEAKSPEKAKSPEKAKTL 759
Query: 264 D--ECEQALAAEPKAKDPFAHLPK 285
D E A+ +A+ P P+
Sbjct: 760 DVKSPEAKTPAKEEARSPADKFPE 783
Score = 29.3 bits (64), Expect = 7.4
Identities = 27/84 (32%), Positives = 36/84 (42%), Gaps = 7/84 (8%)
Query: 203 VLGEVKLCEKMAQFDAKKFAETQPKKDTPRKEKGSREEKQKPQAERKEEKKAAAPAPEEE 262
V E K EK A+ K A++ K +P KE+ EK K KEE K+ PE+
Sbjct: 670 VKAEAKSPEK-AKSPVKAEAKSPEKAKSPVKEEAKSPEKAKSPV--KEEAKS----PEKA 722
Query: 263 MDECEQALAAEPKAKDPFAHLPKS 286
++ KAK P KS
Sbjct: 723 KSPVKEEAKTPEKAKSPVKEEAKS 746
>gi|153945728 microtubule-associated protein 1B [Homo sapiens]
Length = 2468
Score = 37.0 bits (84), Expect = 0.035
Identities = 34/107 (31%), Positives = 52/107 (48%), Gaps = 9/107 (8%)
Query: 206 EVKLCEKMAQFDAKKFA-ETQPKKDTPRKEKGSREEKQKPQAE--RKEE----KKAAAPA 258
+ ++ EK A K A E KK+T K + +EEK+KP+ E +KE+ KK P
Sbjct: 617 KAEVAEKQATDVKPKAAKEKTVKKETKVKPEDKKEEKEKPKKEVAKKEDKTPIKKEEKPK 676
Query: 259 PEEEMDECEQALAAEPKAKDPFAHLPKSTFVLDEFKRKYSNEDTLSV 305
EE E ++ + E K K+P + K T E K++ E+ V
Sbjct: 677 KEEVKKEVKKEIKKEEK-KEPKKEVKKET-PPKEVKKEVKKEEKKEV 721
Score = 35.8 bits (81), Expect = 0.079
Identities = 30/109 (27%), Positives = 51/109 (46%), Gaps = 12/109 (11%)
Query: 197 QPQFRAVLGEVKLCEKMAQFDAKKFAETQPKKDTPRKE---KGSREEKQKPQAERKEEKK 253
+P+ V EVK K + + KK + + KK+TP KE + +EEK++ + E KE KK
Sbjct: 674 KPKKEEVKKEVK---KEIKKEEKKEPKKEVKKETPPKEVKKEVKKEEKKEVKKEEKEPKK 730
Query: 254 AAAPAPEE------EMDECEQALAAEPKAKDPFAHLPKSTFVLDEFKRK 296
P++ + E ++ A +PK + K + + K K
Sbjct: 731 EIKKLPKDAKKSSTPLSEAKKPAALKPKVPKKEESVKKDSVAAGKPKEK 779
Score = 32.7 bits (73), Expect = 0.67
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Query: 223 ETQPKKDTPRKE---KGSREEKQKPQAERKEEKKAAAPAPEEEMDECEQALAAEPKAKDP 279
E +PKK+ +KE + +EEK++P+ E K+E E + +E ++ E + K
Sbjct: 672 EEKPKKEEVKKEVKKEIKKEEKKEPKKEVKKETPPKEVKKEVKKEEKKEVKKEEKEPKKE 731
Query: 280 FAHLPK 285
LPK
Sbjct: 732 IKKLPK 737
Score = 29.3 bits (64), Expect = 7.4
Identities = 23/90 (25%), Positives = 41/90 (45%), Gaps = 11/90 (12%)
Query: 207 VKLCEKMAQFDAKKFAETQPKKDTPRKEKGSREEKQKPQAERKEEKKAAAPAPEEEMDEC 266
+K EK + + KK + + KK+ ++ K +++ P+ +KE KK ++E E
Sbjct: 669 IKKEEKPKKEEVKKEVKKEIKKEEKKEPKKEVKKETPPKEVKKEVKKEEKKEVKKEEKEP 728
Query: 267 EQALAAEPK-----------AKDPFAHLPK 285
++ + PK AK P A PK
Sbjct: 729 KKEIKKLPKDAKKSSTPLSEAKKPAALKPK 758
Score = 28.9 bits (63), Expect = 9.6
Identities = 25/85 (29%), Positives = 36/85 (42%), Gaps = 9/85 (10%)
Query: 226 PKKDTPRKEKGSREEKQ----KPQ-AERKEEKKAAAPAPEEEMDECEQALAAEPKAKDPF 280
P K+ P K EKQ KP+ A+ K KK PE++ +E E+ K +D
Sbjct: 608 PSKEEPSPVKAEVAEKQATDVKPKAAKEKTVKKETKVKPEDKKEEKEKPKKEVAKKEDKT 667
Query: 281 ----AHLPKSTFVLDEFKRKYSNED 301
PK V E K++ E+
Sbjct: 668 PIKKEEKPKKEEVKKEVKKEIKKEE 692
>gi|239756270 PREDICTED: StAR-related lipid transfer (START) domain
containing 9 [Homo sapiens]
Length = 4614
Score = 36.6 bits (83), Expect = 0.046
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 11/98 (11%)
Query: 173 KQVLEPSFRQAFPNTNRWFLTCINQPQFRAVLGEVKLCEKMAQFDAKKFAETQPKKDTPR 232
K V+EP + NT R FL +PQF L + + A+F A+ P++D+P
Sbjct: 3068 KLVVEPQ-HECLENTTRCFL---EKPQFSTELRDHNRLDSQAKFVARLKHTCSPQEDSPW 3123
Query: 233 KEKGSREEKQKPQAERKEE--KKAAAPAPEEE-MDECE 267
+E EE+ + QA E + P P+E+ +D C+
Sbjct: 3124 QE----EEQHRDQASGGGEGFAQGVNPLPDEDGLDGCQ 3157
>gi|239750815 PREDICTED: StAR-related lipid transfer (START) domain
containing 9 [Homo sapiens]
Length = 4614
Score = 36.6 bits (83), Expect = 0.046
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 11/98 (11%)
Query: 173 KQVLEPSFRQAFPNTNRWFLTCINQPQFRAVLGEVKLCEKMAQFDAKKFAETQPKKDTPR 232
K V+EP + NT R FL +PQF L + + A+F A+ P++D+P
Sbjct: 3068 KLVVEPQ-HECLENTTRCFL---EKPQFSTELRDHNRLDSQAKFVARLKHTCSPQEDSPW 3123
Query: 233 KEKGSREEKQKPQAERKEE--KKAAAPAPEEE-MDECE 267
+E EE+ + QA E + P P+E+ +D C+
Sbjct: 3124 QE----EEQHRDQASGGGEGFAQGVNPLPDEDGLDGCQ 3157
>gi|239745175 PREDICTED: StAR-related lipid transfer (START) domain
containing 9 [Homo sapiens]
Length = 4614
Score = 36.6 bits (83), Expect = 0.046
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 11/98 (11%)
Query: 173 KQVLEPSFRQAFPNTNRWFLTCINQPQFRAVLGEVKLCEKMAQFDAKKFAETQPKKDTPR 232
K V+EP + NT R FL +PQF L + + A+F A+ P++D+P
Sbjct: 3068 KLVVEPQ-HECLENTTRCFL---EKPQFSTELRDHNRLDSQAKFVARLKHTCSPQEDSPW 3123
Query: 233 KEKGSREEKQKPQAERKEE--KKAAAPAPEEE-MDECE 267
+E EE+ + QA E + P P+E+ +D C+
Sbjct: 3124 QE----EEQHRDQASGGGEGFAQGVNPLPDEDGLDGCQ 3157
>gi|7657218 bromodomain-containing protein 4 isoform short [Homo
sapiens]
Length = 722
Score = 36.2 bits (82), Expect = 0.060
Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Query: 208 KLCEKMAQFDAKKFAETQPKKDTPRKEKGSREEKQKPQAERKEE------KKAAAPAPEE 261
+L E++ + A +QP+++ P+K++ ++EK+K + +RKEE KA P P++
Sbjct: 513 ELQEQLKAVHEQLAALSQPQQNKPKKKEKDKKEKKKEKHKRKEEVEENKKSKAKEPPPKK 572
Query: 262 EMDECEQALAAEPKAKDPFAHLPKSTFVLDE 292
K P P T+ +E
Sbjct: 573 TKKNNSSNSNVSKKEPAPMKSKPPPTYESEE 603
>gi|19718731 bromodomain-containing protein 4 isoform long [Homo
sapiens]
Length = 1362
Score = 36.2 bits (82), Expect = 0.060
Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Query: 208 KLCEKMAQFDAKKFAETQPKKDTPRKEKGSREEKQKPQAERKEE------KKAAAPAPEE 261
+L E++ + A +QP+++ P+K++ ++EK+K + +RKEE KA P P++
Sbjct: 513 ELQEQLKAVHEQLAALSQPQQNKPKKKEKDKKEKKKEKHKRKEEVEENKKSKAKEPPPKK 572
Query: 262 EMDECEQALAAEPKAKDPFAHLPKSTFVLDE 292
K P P T+ +E
Sbjct: 573 TKKNNSSNSNVSKKEPAPMKSKPPPTYESEE 603
>gi|21389423 junctional sarcoplasmic reticulum protein 1 [Homo
sapiens]
Length = 331
Score = 36.2 bits (82), Expect = 0.060
Identities = 17/43 (39%), Positives = 25/43 (58%)
Query: 223 ETQPKKDTPRKEKGSREEKQKPQAERKEEKKAAAPAPEEEMDE 265
E ++ PRKEK +EE+ K + RKEE+ AA P E + +
Sbjct: 237 ERPRREGKPRKEKPRKEERPKKERPRKEERPRAAREPREALPQ 279
>gi|48255891 protein kinase C substrate 80K-H isoform 2 [Homo
sapiens]
Length = 525
Score = 35.4 bits (80), Expect = 0.10
Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 14/92 (15%)
Query: 223 ETQPKKDTPRKEKGSREEKQKPQAERKEEK----------KAAAPAPEEEM---DECEQA 269
E P +P +E+ EE+++ +AE +EE+ K A+PA E++M DE QA
Sbjct: 303 EQPPVPSSPTEEEEEEEEEEEEEAEEEEEEEDSEVQGEQPKPASPAEEDKMPPYDEQTQA 362
Query: 270 -LAAEPKAKDPFAHLPKSTFVLDEFKRKYSNE 300
+ A +A++ F +S ++E R E
Sbjct: 363 FIDAAQEARNKFEEAERSLKDMEESIRNLEQE 394
Score = 32.3 bits (72), Expect = 0.87
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 6/56 (10%)
Query: 224 TQPKKDTPRKEKGSREEKQKPQAERKEEKKAAAPAPEEEMDECEQALAAEPKAKDP 279
T+PK++ P EE+++ + E +EE A EEE +E + +PK P
Sbjct: 298 TEPKEEQPPVPSSPTEEEEEEEEEEEEE------AEEEEEEEDSEVQGEQPKPASP 347
>gi|155369221 potassium channel tetramerisation domain containing 19
[Homo sapiens]
Length = 926
Score = 35.0 bits (79), Expect = 0.13
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Query: 59 PAFEGDDGFCVFESNAIAYYVSNEELRGSTPEAA--AQVVQWVSFA 102
P G DGFC+F ++I Y + LR +TP A+ Q V ++SF+
Sbjct: 766 PPVVGSDGFCMFFEDSIIYTTEMDNLRHTTPTASPQPQEVTFLSFS 811
>gi|190014588 PC4 and SFRS1 interacting protein 1 isoform 2 [Homo
sapiens]
Length = 530
Score = 34.7 bits (78), Expect = 0.18
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Query: 211 EKMAQFDAKKFAETQPKKDTPRKEKGSREEKQKPQAERKEEKKAAAPA---PEEEMDECE 267
EK + KK E Q ++D PRKE +E K++ +++RK K + EEE D+ E
Sbjct: 224 EKQPKKQPKKDEEGQKEEDKPRKEPDKKEGKKEVESKRKNLAKTGVTSTSDSEEEGDDQE 283
>gi|190014586 PC4 and SFRS1 interacting protein 1 isoform 1 [Homo
sapiens]
Length = 333
Score = 34.7 bits (78), Expect = 0.18
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Query: 211 EKMAQFDAKKFAETQPKKDTPRKEKGSREEKQKPQAERKEEKKAAAPA---PEEEMDECE 267
EK + KK E Q ++D PRKE +E K++ +++RK K + EEE D+ E
Sbjct: 224 EKQPKKQPKKDEEGQKEEDKPRKEPDKKEGKKEVESKRKNLAKTGVTSTSDSEEEGDDQE 283
>gi|19923653 PC4 and SFRS1 interacting protein 1 isoform 2 [Homo
sapiens]
Length = 530
Score = 34.7 bits (78), Expect = 0.18
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Query: 211 EKMAQFDAKKFAETQPKKDTPRKEKGSREEKQKPQAERKEEKKAAAPA---PEEEMDECE 267
EK + KK E Q ++D PRKE +E K++ +++RK K + EEE D+ E
Sbjct: 224 EKQPKKQPKKDEEGQKEEDKPRKEPDKKEGKKEVESKRKNLAKTGVTSTSDSEEEGDDQE 283
>gi|239508778 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 123
Score = 34.7 bits (78), Expect = 0.18
Identities = 20/63 (31%), Positives = 35/63 (55%)
Query: 206 EVKLCEKMAQFDAKKFAETQPKKDTPRKEKGSREEKQKPQAERKEEKKAAAPAPEEEMDE 265
E K EK + +K + + K+ RKEK E+K+K + ++K+E++ EEE +E
Sbjct: 26 EGKRKEKRKEKRKEKEKKKKTKETEKRKEKEEEEKKRKRKRKKKKEEEEREEEEEEEEEE 85
Query: 266 CEQ 268
E+
Sbjct: 86 KEE 88
Score = 34.7 bits (78), Expect = 0.18
Identities = 19/57 (33%), Positives = 30/57 (52%)
Query: 219 KKFAETQPKKDTPRKEKGSREEKQKPQAERKEEKKAAAPAPEEEMDECEQALAAEPK 275
+K E + KK T EK +E+++ + +RK +KK EEE +E E+ E K
Sbjct: 35 EKRKEKEKKKKTKETEKRKEKEEEEKKRKRKRKKKKEEEEREEEEEEEEEEKEEEEK 91
Score = 33.5 bits (75), Expect = 0.39
Identities = 16/59 (27%), Positives = 32/59 (54%)
Query: 219 KKFAETQPKKDTPRKEKGSREEKQKPQAERKEEKKAAAPAPEEEMDECEQALAAEPKAK 277
KK ET+ +K+ +EK + +++K + E + E++ E+E +E E+ + K K
Sbjct: 44 KKTKETEKRKEKEEEEKKRKRKRKKKKEEEEREEEEEEEEEEKEEEEKEEGRRRKKKKK 102
Score = 33.1 bits (74), Expect = 0.51
Identities = 16/60 (26%), Positives = 33/60 (55%)
Query: 219 KKFAETQPKKDTPRKEKGSREEKQKPQAERKEEKKAAAPAPEEEMDECEQALAAEPKAKD 278
+K E + +K+ +K K + + K+K + E+K ++K EEE +E E+ E + ++
Sbjct: 31 EKRKEKRKEKEKKKKTKETEKRKEKEEEEKKRKRKRKKKKEEEEREEEEEEEEEEKEEEE 90
Score = 32.0 bits (71), Expect = 1.1
Identities = 15/52 (28%), Positives = 29/52 (55%)
Query: 211 EKMAQFDAKKFAETQPKKDTPRKEKGSREEKQKPQAERKEEKKAAAPAPEEE 262
EK + KK E + +++ +E+ +EE++K + R+++KK EEE
Sbjct: 59 EKKRKRKRKKKKEEEEREEEEEEEEEEKEEEEKEEGRRRKKKKKRRRKEEEE 110
Score = 30.0 bits (66), Expect = 4.3
Identities = 16/52 (30%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Query: 219 KKFAETQPKKDTPRKEK--GSREEKQKPQAERKEEKKAAAPAPEEEMDECEQ 268
K+ ET+ ++T +E+ G R+EK+K + + KE+KK + + E E+
Sbjct: 8 KETEETEETEETEEEEEKEGKRKEKRKEKRKEKEKKKKTKETEKRKEKEEEE 59
Score = 30.0 bits (66), Expect = 4.3
Identities = 15/73 (20%), Positives = 39/73 (53%)
Query: 206 EVKLCEKMAQFDAKKFAETQPKKDTPRKEKGSREEKQKPQAERKEEKKAAAPAPEEEMDE 265
E + E+ + + K+ + + K+ K+K ++E +++ + E +E+K+ ++E +E
Sbjct: 15 ETEETEEEEEKEGKRKEKRKEKRKEKEKKKKTKETEKRKEKEEEEKKRKRKRKKKKEEEE 74
Query: 266 CEQALAAEPKAKD 278
E+ E + K+
Sbjct: 75 REEEEEEEEEEKE 87
Score = 29.6 bits (65), Expect = 5.6
Identities = 14/55 (25%), Positives = 30/55 (54%)
Query: 211 EKMAQFDAKKFAETQPKKDTPRKEKGSREEKQKPQAERKEEKKAAAPAPEEEMDE 265
EK + K+ + + K++ +K K R++K++ + +EE++ EEE +E
Sbjct: 39 EKEKKKKTKETEKRKEKEEEEKKRKRKRKKKKEEEEREEEEEEEEEEKEEEEKEE 93
>gi|21389511 zinc finger, matrin type 2 [Homo sapiens]
Length = 199
Score = 34.7 bits (78), Expect = 0.18
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 201 RAVLGEVKLCEKMAQFDAKKFAETQPKKDTPRKEKGSREEKQKPQAERKEEKKAAAPAPE 260
R+ L +VK K + + KK E Q D + K REE++K +A +KE++K E
Sbjct: 116 RSTLDQVK---KRFEVNKKKMEEKQKDYDFEERMKELREEEEKAKAYKKEKQKEKKRRAE 172
Query: 261 EEM 263
E++
Sbjct: 173 EDL 175
>gi|239756241 PREDICTED: golgi autoantigen, golgin subfamily a-like
[Homo sapiens]
Length = 899
Score = 34.3 bits (77), Expect = 0.23
Identities = 26/120 (21%), Positives = 55/120 (45%), Gaps = 9/120 (7%)
Query: 208 KLCEKMAQFDAKKFAETQPKKDTPRKEKGSREEKQKPQAERKEEKKAAAPAPEEEMDECE 267
K+ E++ + +K + Q KK ++EK EE+ + + ++ E++ EE+M + E
Sbjct: 418 KMWEQVEKMREEKKMQEQEKKTRDQEEKMQEEERIREREKKMREEEETMREQEEKMQKQE 477
Query: 268 QALAAEPKAKDPFAHLPKSTFVLDEFKRKYSNEDTLSVALPYFWEHFDK--DGWSLWYSE 325
+ + + + + LP+ L E ++ E+ + WE +K D +W E
Sbjct: 478 ENMWEQEEKEWQQQRLPEQKEKLWEQEKMQEQEEKI-------WEQEEKIRDQEEMWGQE 530
Score = 30.8 bits (68), Expect = 2.5
Identities = 23/104 (22%), Positives = 47/104 (45%), Gaps = 1/104 (0%)
Query: 211 EKMAQFDAKKFAETQPKKDTPRKEKGSREEKQKPQAERKEEKKAAAPAPEEEMDECEQAL 270
EKM + + K + + + +K T +EK + ++++ + E E++ EE M E E+ +
Sbjct: 677 EKMQEQEEKIWEQEKMEKKTQEQEKKTWDQEKMREEESMREREKKMREEEEMMREQEEKM 736
Query: 271 -AAEPKAKDPFAHLPKSTFVLDEFKRKYSNEDTLSVALPYFWEH 313
E K ++ + + + E + K + L WEH
Sbjct: 737 QEQEEKMQEQEEEMWEQEEKMWEQEEKMWEQQRLPEQKEKLWEH 780
Score = 29.3 bits (64), Expect = 7.4
Identities = 20/85 (23%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Query: 216 FDAKKFAETQPKKDTPRKEKGSREEKQKPQAERKEEKKAAAPAPEEEMDECEQALAAEPK 275
+D +K E + ++ +K + EE + Q E+ +E++ EEEM E E+ + + +
Sbjct: 704 WDQEKMREEESMREREKKMR-EEEEMMREQEEKMQEQEEKMQEQEEEMWEQEEKMWEQEE 762
Query: 276 AKDPFAHLPKSTFVLDEFKRKYSNE 300
LP+ L E ++ E
Sbjct: 763 KMWEQQRLPEQKEKLWEHEKMQEQE 787
Score = 28.9 bits (63), Expect = 9.6
Identities = 14/52 (26%), Positives = 28/52 (53%)
Query: 219 KKFAETQPKKDTPRKEKGSREEKQKPQAERKEEKKAAAPAPEEEMDECEQAL 270
+K + Q KK ++EK EE+ + + ++ E++ EE+M E E+ +
Sbjct: 568 EKKTQEQEKKTWDQEEKMREEERMREREKKMREEEEMMREQEEKMQEQEEKM 619
>gi|208879470 eukaryotic translation elongation factor 1 epsilon 1
isoform 2 [Homo sapiens]
Length = 139
Score = 34.3 bits (77), Expect = 0.23
Identities = 27/110 (24%), Positives = 49/110 (44%), Gaps = 24/110 (21%)
Query: 57 KVPAFEGDDGFCVFESNAIAYYV----SNEELRGSTPEAAAQVVQWVSFADSDIVPPAST 112
++P + ++G + IA ++ + E L GST E A V QW+ + + + +S
Sbjct: 29 QIPVLQTNNGPSLTGLTTIAAHLVKQANKEYLLGSTAEEKAIVQQWLEYRVTQVDGHSS- 87
Query: 113 WVFPTLGIMHHNKQATENAKEEVRRILGLLDAYLKTRTFLVGERVTLADI 162
K ++ +L L++YL+ + +L G TLADI
Sbjct: 88 -------------------KNDIHTLLKDLNSYLEDKVYLTGYNFTLADI 118
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.133 0.412
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,178,665
Number of Sequences: 37866
Number of extensions: 859631
Number of successful extensions: 7862
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 119
Number of HSP's successfully gapped in prelim test: 143
Number of HSP's that attempted gapping in prelim test: 5977
Number of HSP's gapped (non-prelim): 1503
length of query: 437
length of database: 18,247,518
effective HSP length: 105
effective length of query: 332
effective length of database: 14,271,588
effective search space: 4738167216
effective search space used: 4738167216
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.