Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 4502379
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4502379 B-cell CLL/lymphoma 10 [Homo sapiens]
(233 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4502379 B-cell CLL/lymphoma 10 [Homo sapiens] 464 e-131
gi|4503031 CASP2 and RIPK1 domain containing adaptor with death ... 35 0.042
gi|148536848 carboxyl ester lipase precursor [Homo sapiens] 35 0.055
gi|13129124 caspase recruitment domain protein 14 isoform 1 [Hom... 33 0.27
gi|19920317 cytoskeleton-associated protein 4 [Homo sapiens] 32 0.61
gi|153945878 mucin 5, subtype B, tracheobronchial [Homo sapiens] 32 0.61
gi|16554562 caspase recruitment domain protein 9 isoform 2 [Homo... 32 0.61
gi|47717131 caspase recruitment domain protein 9 isoform 1 [Homo... 32 0.61
gi|12232415 hypothetical protein LOC64762 [Homo sapiens] 31 1.0
gi|239745095 PREDICTED: hypothetical protein LOC645202 [Homo sap... 31 1.0
gi|239757956 PREDICTED: similar to CYorf16 protein [Homo sapiens] 30 1.4
gi|239752467 PREDICTED: hypothetical protein [Homo sapiens] 30 1.4
gi|239747010 PREDICTED: hypothetical protein XP_002344242 [Homo ... 30 1.4
gi|54792088 hypothetical protein LOC23506 [Homo sapiens] 30 1.4
gi|222418637 golgi autoantigen, golgin subfamily a-like [Homo sa... 30 1.8
gi|222446603 golgi autoantigen, golgin subfamily a-like [Homo sa... 30 1.8
gi|239745079 PREDICTED: Putative golgin subfamily A member 6-lik... 30 1.8
gi|40217801 hypothetical protein LOC79864 isoform 2 [Homo sapiens] 30 1.8
gi|40217799 hypothetical protein LOC79864 isoform 1 [Homo sapiens] 30 1.8
gi|27262624 ATP-binding cassette, sub-family A , member 5 [Homo ... 30 2.3
gi|27262626 ATP-binding cassette, sub-family A , member 5 [Homo ... 30 2.3
gi|117414154 sodium channel associated protein 2 isoform b [Homo... 30 2.3
gi|117414162 sodium channel associated protein 2 isoform a [Homo... 30 2.3
gi|93352551 CWF19-like 1, cell cycle control [Homo sapiens] 30 2.3
gi|56711324 HAUS augmin-like complex, subunit 3 [Homo sapiens] 29 3.0
gi|238859653 pleckstrin homology domain containing family A memb... 29 3.0
gi|238859651 pleckstrin homology domain containing family A memb... 29 3.0
gi|56549696 E1A binding protein p400 [Homo sapiens] 29 3.0
gi|195972857 Rho/Rac guanine nucleotide exchange factor 18 isofo... 29 3.9
gi|41327769 Rho/Rac guanine nucleotide exchange factor 18 isofor... 29 3.9
>gi|4502379 B-cell CLL/lymphoma 10 [Homo sapiens]
Length = 233
Score = 464 bits (1195), Expect = e-131
Identities = 233/233 (100%), Positives = 233/233 (100%)
Query: 1 MEPTAPSLTEEDLTEVKKDALENLRVYLCEKIIAERHFDHLRAKKILSREDTEEISCRTS 60
MEPTAPSLTEEDLTEVKKDALENLRVYLCEKIIAERHFDHLRAKKILSREDTEEISCRTS
Sbjct: 1 MEPTAPSLTEEDLTEVKKDALENLRVYLCEKIIAERHFDHLRAKKILSREDTEEISCRTS 60
Query: 61 SRKRAGKLLDYLQENPKGLDTLVESIRREKTQNFLIQKITDEVLKLRNIKLEHLKGLKCS 120
SRKRAGKLLDYLQENPKGLDTLVESIRREKTQNFLIQKITDEVLKLRNIKLEHLKGLKCS
Sbjct: 61 SRKRAGKLLDYLQENPKGLDTLVESIRREKTQNFLIQKITDEVLKLRNIKLEHLKGLKCS 120
Query: 121 SCEPFPDGATNNLSRSNSDESNFSEKLRASTVMYHPEGESSTTPFFSTNSSLNLPVLEVG 180
SCEPFPDGATNNLSRSNSDESNFSEKLRASTVMYHPEGESSTTPFFSTNSSLNLPVLEVG
Sbjct: 121 SCEPFPDGATNNLSRSNSDESNFSEKLRASTVMYHPEGESSTTPFFSTNSSLNLPVLEVG 180
Query: 181 RTENTIFSSTTLPRPGDPGAPPLPPDLQLEEEGTCANSSEMFLPLRSRTVSRQ 233
RTENTIFSSTTLPRPGDPGAPPLPPDLQLEEEGTCANSSEMFLPLRSRTVSRQ
Sbjct: 181 RTENTIFSSTTLPRPGDPGAPPLPPDLQLEEEGTCANSSEMFLPLRSRTVSRQ 233
>gi|4503031 CASP2 and RIPK1 domain containing adaptor with death
domain [Homo sapiens]
Length = 199
Score = 35.4 bits (80), Expect = 0.042
Identities = 26/91 (28%), Positives = 47/91 (51%), Gaps = 7/91 (7%)
Query: 18 KDALENLRVYLCEKIIAERH-FDHLRAKKILSREDTEEISCRTSSRKRAGKLLDYL-QEN 75
K L +LR+ L +++ E +L + IL+ +EI+ +T+ ++ LLD L
Sbjct: 6 KQVLRSLRLELGAEVLVEGLVLQYLYQEGILTENHIQEINAQTTGLRKTMLLLDILPSRG 65
Query: 76 PKGLDTLVESIR-----REKTQNFLIQKITD 101
PK DT ++S++ REK + + +TD
Sbjct: 66 PKAFDTFLDSLQEFPWVREKLKKAREEAMTD 96
>gi|148536848 carboxyl ester lipase precursor [Homo sapiens]
Length = 756
Score = 35.0 bits (79), Expect = 0.055
Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 5/50 (10%)
Query: 156 PEGESSTTPFFSTNSSLNLPVLEVGRTENTIFSSTTLPRPGDPGAPPLPP 205
P G+S TP T S PV G + + +P GD GAPP+PP
Sbjct: 565 PTGDSEATPVPPTGDSETAPVPPTGDS-----GAPPVPPTGDSGAPPVPP 609
Score = 33.9 bits (76), Expect = 0.12
Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 5/50 (10%)
Query: 156 PEGESSTTPFFSTNSSLNLPVLEVGRTENTIFSSTTLPRPGDPGAPPLPP 205
P G+S P T S PV G +E + +P GD GAPP+PP
Sbjct: 686 PTGDSGAPPVPPTGDSGAPPVTPTGDSE-----TAPVPPTGDSGAPPVPP 730
Score = 33.1 bits (74), Expect = 0.21
Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 5/50 (10%)
Query: 156 PEGESSTTPFFSTNSSLNLPVLEVGRTENTIFSSTTLPRPGDPGAPPLPP 205
P G+S T P T S PV G + + +P GD GAPP+PP
Sbjct: 576 PTGDSETAPVPPTGDSGAPPVPPTGDS-----GAPPVPPTGDSGAPPVPP 620
Score = 31.2 bits (69), Expect = 0.79
Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 5/57 (8%)
Query: 149 ASTVMYHPEGESSTTPFFSTNSSLNLPVLEVGRTENTIFSSTTLPRPGDPGAPPLPP 205
+ T P G+S P T S PV G + + +P GD GAPP+PP
Sbjct: 580 SETAPVPPTGDSGAPPVPPTGDSGAPPVPPTGDS-----GAPPVPPTGDSGAPPVPP 631
Score = 30.8 bits (68), Expect = 1.0
Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 5/50 (10%)
Query: 156 PEGESSTTPFFSTNSSLNLPVLEVGRTENTIFSSTTLPRPGDPGAPPLPP 205
P G+S P T S PV G + + +P GD GAPP+PP
Sbjct: 598 PTGDSGAPPVPPTGDSGAPPVPPTGDS-----GAPPVPPTGDSGAPPVPP 642
Score = 30.8 bits (68), Expect = 1.0
Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 5/50 (10%)
Query: 156 PEGESSTTPFFSTNSSLNLPVLEVGRTENTIFSSTTLPRPGDPGAPPLPP 205
P G+S P T S PV G + + +P GD GAPP+PP
Sbjct: 609 PTGDSGAPPVPPTGDSGAPPVPPTGDS-----GAPPVPPTGDSGAPPVPP 653
Score = 30.8 bits (68), Expect = 1.0
Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 5/50 (10%)
Query: 156 PEGESSTTPFFSTNSSLNLPVLEVGRTENTIFSSTTLPRPGDPGAPPLPP 205
P G+S P T S PV G + + +P GD GAPP+PP
Sbjct: 620 PTGDSGAPPVPPTGDSGAPPVPPTGDS-----GAPPVPPTGDSGAPPVPP 664
Score = 30.8 bits (68), Expect = 1.0
Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 5/50 (10%)
Query: 156 PEGESSTTPFFSTNSSLNLPVLEVGRTENTIFSSTTLPRPGDPGAPPLPP 205
P G+S P T S PV G + + +P GD GAPP+PP
Sbjct: 631 PTGDSGAPPVPPTGDSGAPPVPPTGDS-----GAPPVPPTGDSGAPPVPP 675
Score = 30.4 bits (67), Expect = 1.4
Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 5/47 (10%)
Query: 159 ESSTTPFFSTNSSLNLPVLEVGRTENTIFSSTTLPRPGDPGAPPLPP 205
+ TP T S PV G +E + +P GD GAPP+PP
Sbjct: 557 DQEATPVPPTGDSEATPVPPTGDSE-----TAPVPPTGDSGAPPVPP 598
Score = 29.6 bits (65), Expect = 2.3
Identities = 18/50 (36%), Positives = 21/50 (42%), Gaps = 5/50 (10%)
Query: 156 PEGESSTTPFFSTNSSLNLPVLEVGRTENTIFSSTTLPRPGDPGAPPLPP 205
P G+S P T S PV G +P GD GAPP+PP
Sbjct: 653 PTGDSGAPPVPPTGDSGAPPVPPTGDA-----GPPPVPPTGDSGAPPVPP 697
>gi|13129124 caspase recruitment domain protein 14 isoform 1 [Homo
sapiens]
Length = 1004
Score = 32.7 bits (73), Expect = 0.27
Identities = 31/85 (36%), Positives = 45/85 (52%), Gaps = 8/85 (9%)
Query: 7 SLTEEDLTEVKKDALENLRVYLCEKIIAERHFDHLRAKKILSREDTEEI--SCR-TSSRK 63
+L EE L E+ +E+ R + I R +LR K+L + D EE+ S R T+S
Sbjct: 13 ALDEETLWEM----MESHRHRIVRCICPSRLTPYLRQAKVLCQLDEEEVLHSPRLTNSAM 68
Query: 64 RAGKLLDYLQENPK-GLDTLVESIR 87
RAG LLD L+ K G +ES++
Sbjct: 69 RAGHLLDLLKTRGKNGAIAFLESLK 93
>gi|19920317 cytoskeleton-associated protein 4 [Homo sapiens]
Length = 602
Score = 31.6 bits (70), Expect = 0.61
Identities = 34/140 (24%), Positives = 64/140 (45%), Gaps = 7/140 (5%)
Query: 10 EEDLTEVKKDALENLRVYLCEKIIAERHFDHLRAKKILSREDTEEISCRTSSRKRAGKLL 69
EE LTE+ K +N+ ++ + +++ + ++A K+ S E++E + K A K
Sbjct: 238 EERLTELTKSINDNIAIFTEVQKRSQKEINDMKA-KVASLEESEGNKQDLKALKEAVK-- 294
Query: 70 DYLQENPKGLDTLVESIRREKTQNFLIQKITDEVLKLRNIKLEHLKGLKCSSCEPFP-DG 128
+Q + K + +E++R T + I EV +L ++K E + + E
Sbjct: 295 -EIQTSAKSREWDMEALR--STLQTMESDIYTEVRELVSLKQEQQAFKEAADTERLALQA 351
Query: 129 ATNNLSRSNSDESNFSEKLR 148
T L RS S E++R
Sbjct: 352 LTEKLLRSEESVSRLPEEIR 371
>gi|153945878 mucin 5, subtype B, tracheobronchial [Homo sapiens]
Length = 5765
Score = 31.6 bits (70), Expect = 0.61
Identities = 23/60 (38%), Positives = 25/60 (41%), Gaps = 1/60 (1%)
Query: 160 SSTTPFFSTNSSLNLPVLEVGRTENTIFSSTTLPRPGDPGAPPLPPDLQLEEEGTCANSS 219
S TP ST +S P L T T STT P PG P+PP L A SS
Sbjct: 2676 SMATPSSSTQTSGTPPSLTTTATTITATGSTTNP-SSTPGTTPIPPVLTTTATTPAATSS 2734
Score = 31.6 bits (70), Expect = 0.61
Identities = 23/60 (38%), Positives = 25/60 (41%), Gaps = 1/60 (1%)
Query: 160 SSTTPFFSTNSSLNLPVLEVGRTENTIFSSTTLPRPGDPGAPPLPPDLQLEEEGTCANSS 219
S TP ST +S P L T T STT P PG P+PP L A SS
Sbjct: 3376 SMATPSSSTQTSGTPPSLTTTATTITATGSTTNP-SSTPGTTPIPPVLTTTATTPAATSS 3434
Score = 30.8 bits (68), Expect = 1.0
Identities = 23/60 (38%), Positives = 25/60 (41%), Gaps = 1/60 (1%)
Query: 160 SSTTPFFSTNSSLNLPVLEVGRTENTIFSSTTLPRPGDPGAPPLPPDLQLEEEGTCANSS 219
S TP ST +S P L T T STT P PG P+PP L A SS
Sbjct: 3933 SMATPSSSTQTSGTPPSLITTATTITATGSTTNP-SSTPGTTPIPPVLTTTATTPAATSS 3991
Score = 30.4 bits (67), Expect = 1.4
Identities = 22/60 (36%), Positives = 25/60 (41%), Gaps = 1/60 (1%)
Query: 160 SSTTPFFSTNSSLNLPVLEVGRTENTIFSSTTLPRPGDPGAPPLPPDLQLEEEGTCANSS 219
S TP ST +S P L T T STT P PG P+PP L A S+
Sbjct: 2119 SMATPSSSTQTSGTPPSLTTTATTITATGSTTNP-SSTPGTTPIPPVLTTTATTPAATSN 2177
Score = 28.9 bits (63), Expect = 3.9
Identities = 24/72 (33%), Positives = 28/72 (38%), Gaps = 1/72 (1%)
Query: 160 SSTTPFFSTNSSLNLPVLEVGRTENTIFSSTTLPRPGDPGAPPLPPDLQLEEEGTCANSS 219
S TP ST +S P L T T STT P PG P+ P L A SS
Sbjct: 4666 SMATPSSSTQTSGTPPSLTTTATTITATGSTTNP-SSTPGTTPITPVLTSTATTPAATSS 4724
Query: 220 EMFLPLRSRTVS 231
+ RT +
Sbjct: 4725 KATSSSSPRTAT 4736
>gi|16554562 caspase recruitment domain protein 9 isoform 2 [Homo
sapiens]
Length = 492
Score = 31.6 bits (70), Expect = 0.61
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 6/84 (7%)
Query: 21 LENLRVYLCEKIIAERHFDHLRAKKILSREDTEEISCRTS---SRKRAGKLLDYLQE-NP 76
LE RV L I R +LR K+L+ +D E++ + +++ G LLD LQ
Sbjct: 14 LEGFRVTLTSVIDPSRITPYLRQCKVLNPDDEEQVLSDPNLVIRKRKVGVLLDILQRTGH 73
Query: 77 KGLDTLVESIRREKTQNFLIQKIT 100
KG +ES+ Q L +K+T
Sbjct: 74 KGYVAFLESLELYYPQ--LYKKVT 95
>gi|47717131 caspase recruitment domain protein 9 isoform 1 [Homo
sapiens]
Length = 536
Score = 31.6 bits (70), Expect = 0.61
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 6/84 (7%)
Query: 21 LENLRVYLCEKIIAERHFDHLRAKKILSREDTEEISCRTS---SRKRAGKLLDYLQE-NP 76
LE RV L I R +LR K+L+ +D E++ + +++ G LLD LQ
Sbjct: 14 LEGFRVTLTSVIDPSRITPYLRQCKVLNPDDEEQVLSDPNLVIRKRKVGVLLDILQRTGH 73
Query: 77 KGLDTLVESIRREKTQNFLIQKIT 100
KG +ES+ Q L +K+T
Sbjct: 74 KGYVAFLESLELYYPQ--LYKKVT 95
>gi|12232415 hypothetical protein LOC64762 [Homo sapiens]
Length = 875
Score = 30.8 bits (68), Expect = 1.0
Identities = 29/88 (32%), Positives = 34/88 (38%), Gaps = 7/88 (7%)
Query: 133 LSRSNSDESNFSEKLRASTVMYHPEGESSTTPF-----FSTNSSLNLPVLEVGRTENTIF 187
+ + NS K+ M H ES + PF FST S L L + E T I
Sbjct: 181 IGKLNSISKLGKGKMPCLICMNHRTNESISLPFQCKGRFSTRSPLELQMQEGEHTIRNIV 240
Query: 188 SSTTLP-RPGDPGAPPLPP-DLQLEEEG 213
T LP P PP P DL EG
Sbjct: 241 EKTRLPVNVTVPSPPPRNPYDLHFIREG 268
>gi|239745095 PREDICTED: hypothetical protein LOC645202 [Homo
sapiens]
Length = 570
Score = 30.8 bits (68), Expect = 1.0
Identities = 32/118 (27%), Positives = 52/118 (44%), Gaps = 7/118 (5%)
Query: 2 EPTAPSLTEEDLTEVKKDALENLRVYLCEKIIAERHFDHLR-AKKILSREDTEEISCRTS 60
E A +E L + ++ +R+ C+K + + + A K L E + IS
Sbjct: 98 EQKASHQHQEALRRELEAQVQTIRILTCQKTELQMALYYSQHAVKQLEGEARDLISRLHD 157
Query: 61 SRKRAGKL---LDYLQENPKGLDTLVESIRREK---TQNFLIQKITDEVLKLRNIKLE 112
S K AG+L L + K D +E + +E+ + ITDE LK +N KL+
Sbjct: 158 SWKFAGELEQALSAVATQKKKADRYIEELTKERDALSLELYRNTITDEELKEKNAKLQ 215
>gi|239757956 PREDICTED: similar to CYorf16 protein [Homo sapiens]
Length = 223
Score = 30.4 bits (67), Expect = 1.4
Identities = 13/48 (27%), Positives = 26/48 (54%)
Query: 114 LKGLKCSSCEPFPDGATNNLSRSNSDESNFSEKLRASTVMYHPEGESS 161
+KG S +P P + ++ + N D+S+ S ++ +M+HP E +
Sbjct: 159 VKGKSLGSLQPLPPASQDSHLQENFDQSSLSLEIGMGLLMFHPYCEDT 206
>gi|239752467 PREDICTED: hypothetical protein [Homo sapiens]
Length = 357
Score = 30.4 bits (67), Expect = 1.4
Identities = 13/48 (27%), Positives = 26/48 (54%)
Query: 114 LKGLKCSSCEPFPDGATNNLSRSNSDESNFSEKLRASTVMYHPEGESS 161
+KG S +P P + ++ + N D+S+ S ++ +M+HP E +
Sbjct: 293 VKGKSLGSLQPLPPASQDSHLQENFDQSSLSLEIGMGLLMFHPYCEDT 340
>gi|239747010 PREDICTED: hypothetical protein XP_002344242 [Homo
sapiens]
Length = 357
Score = 30.4 bits (67), Expect = 1.4
Identities = 13/48 (27%), Positives = 26/48 (54%)
Query: 114 LKGLKCSSCEPFPDGATNNLSRSNSDESNFSEKLRASTVMYHPEGESS 161
+KG S +P P + ++ + N D+S+ S ++ +M+HP E +
Sbjct: 293 VKGKSLGSLQPLPPASQDSHLQENFDQSSLSLEIGMGLLMFHPYCEDT 340
>gi|54792088 hypothetical protein LOC23506 [Homo sapiens]
Length = 1079
Score = 30.4 bits (67), Expect = 1.4
Identities = 29/114 (25%), Positives = 45/114 (39%), Gaps = 19/114 (16%)
Query: 110 KLEHLKGLKCSSCEPFPDGATNNLSRSNSDESNFSEKLRASTVMYHPEGESSTTPFFSTN 169
K + LK S C P P+G R S S+ + + S+++ E + F
Sbjct: 921 KASRREPLKASQCSPGPEG-----HRKTSSRSDHGTESKLSSILADSHLEMTCNNSFQDK 975
Query: 170 SSLNLPVLEVGRTENTIFSSTTLPRPGDPGAPPLPPDLQLEE--EGTCANSSEM 221
S N P +N + + + G+P PDLQL + E T N E+
Sbjct: 976 SLRNSP-------KNEVLHTDIMKGSGEP-----QPDLQLTKSLETTFKNILEL 1017
>gi|222418637 golgi autoantigen, golgin subfamily a-like [Homo
sapiens]
Length = 750
Score = 30.0 bits (66), Expect = 1.8
Identities = 32/118 (27%), Positives = 51/118 (43%), Gaps = 7/118 (5%)
Query: 2 EPTAPSLTEEDLTEVKKDALENLRVYLCEKIIAERHFDHLR-AKKILSREDTEEISCRTS 60
E A +E L + + +R+ C+K + + + A K L E + IS
Sbjct: 110 EQKASHQHQEALRRELEAQVHTIRILTCQKTELQMALYYSQHAVKQLEGEARDLISRLHD 169
Query: 61 SRKRAGKL---LDYLQENPKGLDTLVESIRREK---TQNFLIQKITDEVLKLRNIKLE 112
S K AG+L L + K D +E + +E+ + ITDE LK +N KL+
Sbjct: 170 SWKFAGELEQALSAVATQKKKADRYIEELTKERDALSLELYRNTITDEELKEKNAKLQ 227
>gi|222446603 golgi autoantigen, golgin subfamily a-like [Homo
sapiens]
Length = 668
Score = 30.0 bits (66), Expect = 1.8
Identities = 32/118 (27%), Positives = 51/118 (43%), Gaps = 7/118 (5%)
Query: 2 EPTAPSLTEEDLTEVKKDALENLRVYLCEKIIAERHFDHLR-AKKILSREDTEEISCRTS 60
E A +E L + + +R+ C+K + + + A K L E + IS
Sbjct: 110 EQKASHQHQEALRRELEAQVHTIRILTCQKTELQMALYYSQHAVKQLEGEARDLISRLHD 169
Query: 61 SRKRAGKL---LDYLQENPKGLDTLVESIRREK---TQNFLIQKITDEVLKLRNIKLE 112
S K AG+L L + K D +E + +E+ + ITDE LK +N KL+
Sbjct: 170 SWKFAGELEQALSAVATQKKKADRYIEELTKERDALSLELYRNTITDEELKEKNAKLQ 227
>gi|239745079 PREDICTED: Putative golgin subfamily A member 6-like
protein 6 [Homo sapiens]
Length = 724
Score = 30.0 bits (66), Expect = 1.8
Identities = 32/118 (27%), Positives = 51/118 (43%), Gaps = 7/118 (5%)
Query: 2 EPTAPSLTEEDLTEVKKDALENLRVYLCEKIIAERHFDHLR-AKKILSREDTEEISCRTS 60
E A +E L + + +R+ C+K + + + A K L E + IS
Sbjct: 171 EQKASHQHQEALRRELEAQVHTIRILTCQKTELQMALYYSQHAVKQLEGEARDLISRLHD 230
Query: 61 SRKRAGKL---LDYLQENPKGLDTLVESIRREK---TQNFLIQKITDEVLKLRNIKLE 112
S K AG+L L + K D +E + +E+ + ITDE LK +N KL+
Sbjct: 231 SWKFAGELEQALSAVATQKKKADRYIEELTKERDALSLELYRNTITDEELKEKNAKLQ 288
>gi|40217801 hypothetical protein LOC79864 isoform 2 [Homo
sapiens]
Length = 307
Score = 30.0 bits (66), Expect = 1.8
Identities = 14/39 (35%), Positives = 23/39 (58%)
Query: 1 MEPTAPSLTEEDLTEVKKDALENLRVYLCEKIIAERHFD 39
++ T P L +EDL + KD+LE+ L ++I+ FD
Sbjct: 23 VQSTHPPLKKEDLHRISKDSLESDSESLTQEIMCHSEFD 61
>gi|40217799 hypothetical protein LOC79864 isoform 1 [Homo
sapiens]
Length = 778
Score = 30.0 bits (66), Expect = 1.8
Identities = 14/39 (35%), Positives = 23/39 (58%)
Query: 1 MEPTAPSLTEEDLTEVKKDALENLRVYLCEKIIAERHFD 39
++ T P L +EDL + KD+LE+ L ++I+ FD
Sbjct: 23 VQSTHPPLKKEDLHRISKDSLESDSESLTQEIMCHSEFD 61
>gi|27262624 ATP-binding cassette, sub-family A , member 5 [Homo
sapiens]
Length = 1642
Score = 29.6 bits (65), Expect = 2.3
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Query: 101 DEVLKLRNIKLEHLKGLKCSSCEPFPDGATNNLSRSNSDESNF--SEKLRASTVMY 154
DE +K +K++ L G +C CE P +NL + D+ +F S K++ Y
Sbjct: 1265 DEDVKAERLKVKELMGCQC--CEEKPSIMVSNLHKEYDDKKDFLLSRKVKKVATKY 1318
>gi|27262626 ATP-binding cassette, sub-family A , member 5 [Homo
sapiens]
Length = 1642
Score = 29.6 bits (65), Expect = 2.3
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Query: 101 DEVLKLRNIKLEHLKGLKCSSCEPFPDGATNNLSRSNSDESNF--SEKLRASTVMY 154
DE +K +K++ L G +C CE P +NL + D+ +F S K++ Y
Sbjct: 1265 DEDVKAERLKVKELMGCQC--CEEKPSIMVSNLHKEYDDKKDFLLSRKVKKVATKY 1318
>gi|117414154 sodium channel associated protein 2 isoform b [Homo
sapiens]
Length = 939
Score = 29.6 bits (65), Expect = 2.3
Identities = 20/71 (28%), Positives = 40/71 (56%), Gaps = 10/71 (14%)
Query: 49 REDTEEISCRTSSRKRAGKLLDYLQENPKG-LDTLVESIRREKTQNFLIQKITDEVLKLR 107
+ED ++ T+ R K + + + N KG L+ +V ++ E I+K+T E++K +
Sbjct: 368 KEDIHSLALLTTDRL---KEIIFRERNSKGQLEVMVHKLQNE------IKKLTVELMKAK 418
Query: 108 NIKLEHLKGLK 118
+ + +HLK L+
Sbjct: 419 DQQEDHLKHLR 429
>gi|117414162 sodium channel associated protein 2 isoform a [Homo
sapiens]
Length = 1032
Score = 29.6 bits (65), Expect = 2.3
Identities = 20/71 (28%), Positives = 40/71 (56%), Gaps = 10/71 (14%)
Query: 49 REDTEEISCRTSSRKRAGKLLDYLQENPKG-LDTLVESIRREKTQNFLIQKITDEVLKLR 107
+ED ++ T+ R K + + + N KG L+ +V ++ E I+K+T E++K +
Sbjct: 461 KEDIHSLALLTTDRL---KEIIFRERNSKGQLEVMVHKLQNE------IKKLTVELMKAK 511
Query: 108 NIKLEHLKGLK 118
+ + +HLK L+
Sbjct: 512 DQQEDHLKHLR 522
>gi|93352551 CWF19-like 1, cell cycle control [Homo sapiens]
Length = 538
Score = 29.6 bits (65), Expect = 2.3
Identities = 22/80 (27%), Positives = 30/80 (37%), Gaps = 12/80 (15%)
Query: 126 PDGATNNLSRSNSDESNFSEKLRASTVMYHPEGESSTTPFFSTNSSLNLPVLEVGRTENT 185
P T N R + E++ +++ A P ES+ FF N GR
Sbjct: 258 PPDVTENPYRKSGQEASIGKQILA------PVEESACQFFFDLNEKQGRKRSSTGR---- 307
Query: 186 IFSSTTLPRPGDPGAPPLPP 205
S + P P P PP PP
Sbjct: 308 --DSKSSPHPKQPRKPPQPP 325
>gi|56711324 HAUS augmin-like complex, subunit 3 [Homo sapiens]
Length = 603
Score = 29.3 bits (64), Expect = 3.0
Identities = 27/113 (23%), Positives = 52/113 (46%), Gaps = 9/113 (7%)
Query: 40 HLRAKKILSREDTEEISCRTSSRKRA--GKLLDYLQENPKGLDTLVESIRREKTQNFLIQ 97
++ + +LS + E S S K G LD + K D ++ + + ++
Sbjct: 46 NVNEQNVLSERELEAFSILQKSGKPILEGAALDEALKTCKTSD-----LKTPRLDDKELE 100
Query: 98 KITDEVLKLRNIKLEHLKGLKCSSCEPFPDGATNNLSRSNSDESNFSEKLRAS 150
K+ DEV L +KL++LK + + C+ ++ R N+ E ++KL+ S
Sbjct: 101 KLEDEVQTL--LKLKNLKIQRRNKCQLMASVTSHKSLRLNAKEEEATKKLKQS 151
>gi|238859653 pleckstrin homology domain containing family A member
4 isoform 2 [Homo sapiens]
Length = 583
Score = 29.3 bits (64), Expect = 3.0
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Query: 189 STTLPRPGD-PGAPPLPPDLQLEEEGTCANSSEMFLPLRSR 228
S P+PG+ PG P PP++ EEG + S E+ R R
Sbjct: 164 SPARPQPGEGPGGPGGPPEVSRGEEGRISESPEVTRLSRGR 204
>gi|238859651 pleckstrin homology domain containing family A member
4 isoform 1 [Homo sapiens]
Length = 779
Score = 29.3 bits (64), Expect = 3.0
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Query: 189 STTLPRPGD-PGAPPLPPDLQLEEEGTCANSSEMFLPLRSR 228
S P+PG+ PG P PP++ EEG + S E+ R R
Sbjct: 164 SPARPQPGEGPGGPGGPPEVSRGEEGRISESPEVTRLSRGR 204
>gi|56549696 E1A binding protein p400 [Homo sapiens]
Length = 3122
Score = 29.3 bits (64), Expect = 3.0
Identities = 19/87 (21%), Positives = 36/87 (41%), Gaps = 8/87 (9%)
Query: 150 STVMYHPEGESSTTPFFSTNSSLNLPVLEVGRTENTIFS--------STTLPRPGDPGAP 201
+T +PE +++ PF ++ +S + P + +T S + T + PG P
Sbjct: 1472 ATFSANPEAKAAAAPFQTSQASASAPRHQPASASSTAASPAHPAKLRAQTTAQASTPGQP 1531
Query: 202 PLPPDLQLEEEGTCANSSEMFLPLRSR 228
P P G A + LP +++
Sbjct: 1532 PPQPQAPSHAAGQSALPQRLVLPSQAQ 1558
>gi|195972857 Rho/Rac guanine nucleotide exchange factor 18 isoform
b [Homo sapiens]
Length = 1173
Score = 28.9 bits (63), Expect = 3.9
Identities = 25/72 (34%), Positives = 32/72 (44%), Gaps = 14/72 (19%)
Query: 157 EGESSTTP-----FFSTNSSLNLPVLEVGRTENTIFS---STTLPRPGDPGAPPLPPDLQ 208
+G SST P F+ N P T+N F S+T PRP D PP PDL+
Sbjct: 711 DGGSSTGPPRRAETFAGYDCTNSP------TKNGSFKKKVSSTDPRPRDWRGPPNSPDLK 764
Query: 209 LEEEGTCANSSE 220
L + +S E
Sbjct: 765 LSDSDIPGSSEE 776
>gi|41327769 Rho/Rac guanine nucleotide exchange factor 18 isoform a
[Homo sapiens]
Length = 1015
Score = 28.9 bits (63), Expect = 3.9
Identities = 25/72 (34%), Positives = 32/72 (44%), Gaps = 14/72 (19%)
Query: 157 EGESSTTP-----FFSTNSSLNLPVLEVGRTENTIFS---STTLPRPGDPGAPPLPPDLQ 208
+G SST P F+ N P T+N F S+T PRP D PP PDL+
Sbjct: 553 DGGSSTGPPRRAETFAGYDCTNSP------TKNGSFKKKVSSTDPRPRDWRGPPNSPDLK 606
Query: 209 LEEEGTCANSSE 220
L + +S E
Sbjct: 607 LSDSDIPGSSEE 618
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.311 0.129 0.362
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,588,718
Number of Sequences: 37866
Number of extensions: 454584
Number of successful extensions: 2093
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 65
Number of HSP's that attempted gapping in prelim test: 2033
Number of HSP's gapped (non-prelim): 125
length of query: 233
length of database: 18,247,518
effective HSP length: 99
effective length of query: 134
effective length of database: 14,498,784
effective search space: 1942837056
effective search space used: 1942837056
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.