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Search of human proteins with 4502119
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4502119 amine oxidase, copper containing 3 precursor [Homo
sapiens]
(763 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4502119 amine oxidase, copper containing 3 precursor [Homo sa... 1582 0.0
gi|60498984 amine oxidase, copper containing 2 isoform b [Homo s... 1013 0.0
gi|60498982 amine oxidase, copper containing 2 isoform a [Homo s... 976 0.0
gi|73486661 amiloride binding protein 1 precursor [Homo sapiens] 529 e-150
gi|18379346 VPS10 domain receptor protein SORCS 3 [Homo sapiens] 34 0.44
gi|18959276 forkhead box D4-like 1 [Homo sapiens] 32 1.7
gi|40353727 synaptopodin isoform A [Homo sapiens] 31 3.8
gi|75677594 forkhead box D4 [Homo sapiens] 31 3.8
gi|21450729 hypothetical protein LOC219833 [Homo sapiens] 31 3.8
gi|226059159 prostaglandin reductase 1 isoform 1 [Homo sapiens] 31 4.9
gi|226059133 prostaglandin reductase 1 isoform 1 [Homo sapiens] 31 4.9
gi|226056130 prostaglandin reductase 1 isoform 2 [Homo sapiens] 31 4.9
gi|45592959 LIM domain binding 3 isoform 1 [Homo sapiens] 31 4.9
gi|118344450 cell death inducing protein [Homo sapiens] 31 4.9
gi|157042770 forkhead box D4-like 3 [Homo sapiens] 30 6.4
gi|146262007 forkhead box D4-like 6 [Homo sapiens] 30 6.4
gi|22749049 Leber congenital amaurosis 5-like [Homo sapiens] 30 6.4
gi|21704287 sialidase 4 [Homo sapiens] 30 8.4
gi|10863987 zona pellucida glycoprotein 4 preproprotein [Homo sa... 30 8.4
>gi|4502119 amine oxidase, copper containing 3 precursor [Homo
sapiens]
Length = 763
Score = 1582 bits (4095), Expect = 0.0
Identities = 763/763 (100%), Positives = 763/763 (100%)
Query: 1 MNQKTILVLLILAVITIFALVCVLLVGRGGDGGEPSQLPHCPSVSPSAQPWTHPGQSQLF 60
MNQKTILVLLILAVITIFALVCVLLVGRGGDGGEPSQLPHCPSVSPSAQPWTHPGQSQLF
Sbjct: 1 MNQKTILVLLILAVITIFALVCVLLVGRGGDGGEPSQLPHCPSVSPSAQPWTHPGQSQLF 60
Query: 61 ADLSREELTAVMRFLTQRLGPGLVDAAQARPSDNCVFSVELQLPPKAAALAHLDRGSPPP 120
ADLSREELTAVMRFLTQRLGPGLVDAAQARPSDNCVFSVELQLPPKAAALAHLDRGSPPP
Sbjct: 61 ADLSREELTAVMRFLTQRLGPGLVDAAQARPSDNCVFSVELQLPPKAAALAHLDRGSPPP 120
Query: 121 AREALAIVFFGRQPQPNVSELVVGPLPHPSYMRDVTVERHGGPLPYHRRPVLFQEYLDID 180
AREALAIVFFGRQPQPNVSELVVGPLPHPSYMRDVTVERHGGPLPYHRRPVLFQEYLDID
Sbjct: 121 AREALAIVFFGRQPQPNVSELVVGPLPHPSYMRDVTVERHGGPLPYHRRPVLFQEYLDID 180
Query: 181 QMIFNRELPQASGLLHHCCFYKHRGRNLVTMTTAPRGLQSGDRATWFGLYYNISGAGFFL 240
QMIFNRELPQASGLLHHCCFYKHRGRNLVTMTTAPRGLQSGDRATWFGLYYNISGAGFFL
Sbjct: 181 QMIFNRELPQASGLLHHCCFYKHRGRNLVTMTTAPRGLQSGDRATWFGLYYNISGAGFFL 240
Query: 241 HHVGLELLVNHKALDPARWTIQKVFYQGRYYDSLAQLEAQFEAGLVNVVLIPDNGTGGSW 300
HHVGLELLVNHKALDPARWTIQKVFYQGRYYDSLAQLEAQFEAGLVNVVLIPDNGTGGSW
Sbjct: 241 HHVGLELLVNHKALDPARWTIQKVFYQGRYYDSLAQLEAQFEAGLVNVVLIPDNGTGGSW 300
Query: 301 SLKSPVPPGPAPPLQFYPQGPRFSVQGSRVASSLWTFSFGLGAFSGPRIFDVRFQGERLV 360
SLKSPVPPGPAPPLQFYPQGPRFSVQGSRVASSLWTFSFGLGAFSGPRIFDVRFQGERLV
Sbjct: 301 SLKSPVPPGPAPPLQFYPQGPRFSVQGSRVASSLWTFSFGLGAFSGPRIFDVRFQGERLV 360
Query: 361 YEISLQEALAIYGGNSPAAMTTRYVDGGFGMGKYTTPLTRGVDCPYLATYVDWHFLLESQ 420
YEISLQEALAIYGGNSPAAMTTRYVDGGFGMGKYTTPLTRGVDCPYLATYVDWHFLLESQ
Sbjct: 361 YEISLQEALAIYGGNSPAAMTTRYVDGGFGMGKYTTPLTRGVDCPYLATYVDWHFLLESQ 420
Query: 421 APKTIRDAFCVFEQNQGLPLRRHHSDLYSHYFGGLAETVLVVRSMSTLLNYDYVWDTVFH 480
APKTIRDAFCVFEQNQGLPLRRHHSDLYSHYFGGLAETVLVVRSMSTLLNYDYVWDTVFH
Sbjct: 421 APKTIRDAFCVFEQNQGLPLRRHHSDLYSHYFGGLAETVLVVRSMSTLLNYDYVWDTVFH 480
Query: 481 PSGAIEIRFYATGYISSAFLFGATGKYGNQVSEHTLGTVHTHSAHFKVDLDVAGLENWVW 540
PSGAIEIRFYATGYISSAFLFGATGKYGNQVSEHTLGTVHTHSAHFKVDLDVAGLENWVW
Sbjct: 481 PSGAIEIRFYATGYISSAFLFGATGKYGNQVSEHTLGTVHTHSAHFKVDLDVAGLENWVW 540
Query: 541 AEDMVFVPMAVPWSPEHQLQRLQVTRKLLEMEEQAAFLVGSATPRYLYLASNHSNKWGHP 600
AEDMVFVPMAVPWSPEHQLQRLQVTRKLLEMEEQAAFLVGSATPRYLYLASNHSNKWGHP
Sbjct: 541 AEDMVFVPMAVPWSPEHQLQRLQVTRKLLEMEEQAAFLVGSATPRYLYLASNHSNKWGHP 600
Query: 601 RGYRIQMLSFAGEPLPQNSSMARGFSWERYQLAVTQRKEEEPSSSSVFNQNDPWAPTVDF 660
RGYRIQMLSFAGEPLPQNSSMARGFSWERYQLAVTQRKEEEPSSSSVFNQNDPWAPTVDF
Sbjct: 601 RGYRIQMLSFAGEPLPQNSSMARGFSWERYQLAVTQRKEEEPSSSSVFNQNDPWAPTVDF 660
Query: 661 SDFINNETIAGKDLVAWVTAGFLHIPHAEDIPNTVTVGNGVGFFLRPYNFFDEDPSFYSA 720
SDFINNETIAGKDLVAWVTAGFLHIPHAEDIPNTVTVGNGVGFFLRPYNFFDEDPSFYSA
Sbjct: 661 SDFINNETIAGKDLVAWVTAGFLHIPHAEDIPNTVTVGNGVGFFLRPYNFFDEDPSFYSA 720
Query: 721 DSIYFRGDQDAGACEVNPLACLPQAAACAPDLPAFSHGGFSHN 763
DSIYFRGDQDAGACEVNPLACLPQAAACAPDLPAFSHGGFSHN
Sbjct: 721 DSIYFRGDQDAGACEVNPLACLPQAAACAPDLPAFSHGGFSHN 763
>gi|60498984 amine oxidase, copper containing 2 isoform b [Homo
sapiens]
Length = 756
Score = 1013 bits (2619), Expect = 0.0
Identities = 498/762 (65%), Positives = 588/762 (77%), Gaps = 8/762 (1%)
Query: 1 MNQKTILVLLILAVITIFALVCVLLVGRGGDGGEPSQLPHCPSVSPSAQPWTHPGQSQLF 60
M+ K +L L L++ITIFAL VLL GG SQ PHCPSVS AQPW HPGQSQLF
Sbjct: 1 MHLKIVLAFLALSLITIFALAYVLLTSPGGS----SQPPHCPSVSHRAQPWPHPGQSQLF 56
Query: 61 ADLSREELTAVMRFLTQRLGPGLVDAAQARPSDNCVFSVELQLPPKAAALAHLDRGSPPP 120
ADLSREELTAVMRFLTQRLGPGLVDAAQA+PSDNC+FSVELQLPPKAAALAHLDRGSPPP
Sbjct: 57 ADLSREELTAVMRFLTQRLGPGLVDAAQAQPSDNCIFSVELQLPPKAAALAHLDRGSPPP 116
Query: 121 AREALAIVFFGRQPQPNVSELVVGPLPHPSYMRDVTVERHGGPLPYHRRPVLFQEYLDID 180
AREALAIV FG QPQPNVSELVVGPLPHPSYMRDVTVERHGGPLPYHRRPVL E+ +
Sbjct: 117 AREALAIVLFGGQPQPNVSELVVGPLPHPSYMRDVTVERHGGPLPYHRRPVLRAEFTQMW 176
Query: 181 QMIFNRELPQASGLLHHCCFYKHRGRNLVTMTTAPRGLQSGDRATWFGLYYNISGAGFFL 240
+ + ELP+A L + + G L + PRGL+SGDRATW LY+NISG G FL
Sbjct: 177 RHLKEVELPKAPIFLSST--FNYNGSTLAAVHATPRGLRSGDRATWMALYHNISGVGLFL 234
Query: 241 HHVGLELLVNHKALDPARWTIQKVFYQGRYYDSLAQLEAQFEAGLVNVVLIPDNGTGGSW 300
H VGLELL++H+ALDPA WT+Q+VFY G YY L QLE +F++G + VV +P G+
Sbjct: 235 HPVGLELLLDHRALDPAHWTVQQVFYLGHYYADLGQLEREFKSGRLEVVRVPLPPPNGAS 294
Query: 301 SLKSPVPPGPAPPLQFYPQGPRFSVQGSRVASSLWTFSFGLGAFSGPRIFDVRFQGERLV 360
SL+S PGP PPLQF PQG ++SVQG+ V SSLW+F+FG G FSG RIFDVRFQGER+
Sbjct: 295 SLRSRNSPGPLPPLQFSPQGSQYSVQGNLVVSSLWSFTFGHGVFSGLRIFDVRFQGERIA 354
Query: 361 YEISLQEALAIYGGNSPAAMTTRYVDGGFGMGKYTTPLTRGVDCPYLATYVDWHFLLESQ 420
YE+S+QE ++IYG +SP M TRY+D FG+G+ + L RGVDCPY AT VD H L+
Sbjct: 355 YEVSVQECVSIYGADSPKTMLTRYLDSSFGLGRNSRGLVRGVDCPYQATMVDIHILVGKG 414
Query: 421 APKTIRDAFCVFEQNQGLPLRRHHSDLYSHYFGGLAETVLVVRSMSTLLNYDYVWDTVFH 480
A + + A CVFE+ QGLPLRRHH+ L +H++GGLA + LVVRS+S++ NYDY+WD V +
Sbjct: 415 AVQLLPGAVCVFEEAQGLPLRRHHNYLQNHFYGGLASSALVVRSVSSVGNYDYIWDFVLY 474
Query: 481 PSGAIEIRFYATGYISSAFLFGATG--KYGNQVSEHTLGTVHTHSAHFKVDLDVAGLENW 538
P+GA+E R +ATGYI++AFL G +GN+V E LGTVHTH+ HFK+DLDVAGL+NW
Sbjct: 475 PNGALEGRVHATGYINTAFLKGGEEGLLFGNRVGERVLGTVHTHAFHFKLDLDVAGLKNW 534
Query: 539 VWAEDMVFVPMAVPWSPEHQLQRLQVTRKLLEMEEQAAFLVGSATPRYLYLASNHSNKWG 598
V AED+VF P+A PW+PEH LQR Q+TR++L E+ AF +GS PRYLYLASN +N WG
Sbjct: 535 VVAEDVVFKPVAAPWNPEHWLQRPQLTRQVLGKEDLTAFSLGSPLPRYLYLASNQTNAWG 594
Query: 599 HPRGYRIQMLSFAGEPLPQNSSMARGFSWERYQLAVTQRKEEEPSSSSVFNQNDPWAPTV 658
H RGYRIQ+ S G +P S M R SW RYQL VTQRKEEE SSS+++QND W PTV
Sbjct: 595 HQRGYRIQIHSPLGIHIPLESDMERALSWGRYQLVVTQRKEEESQSSSIYHQNDIWTPTV 654
Query: 659 DFSDFINNETIAGKDLVAWVTAGFLHIPHAEDIPNTVTVGNGVGFFLRPYNFFDEDPSFY 718
F+DFINNET+ G+DLVAWVTA FLHIPHAEDIPNTVT+GN VGF LRPYNFFDEDPS +
Sbjct: 655 TFADFINNETLLGEDLVAWVTASFLHIPHAEDIPNTVTLGNRVGFLLRPYNFFDEDPSIF 714
Query: 719 SADSIYFRGDQDAGACEVNPLACLPQAAACAPDLPAFSHGGF 760
S S+YF QDAG C +NP+ACLP AAC PDLP FS+ GF
Sbjct: 715 SPGSVYFEKGQDAGLCSINPVACLPDLAACVPDLPPFSYHGF 756
>gi|60498982 amine oxidase, copper containing 2 isoform a [Homo
sapiens]
Length = 729
Score = 976 bits (2524), Expect = 0.0
Identities = 485/762 (63%), Positives = 573/762 (75%), Gaps = 35/762 (4%)
Query: 1 MNQKTILVLLILAVITIFALVCVLLVGRGGDGGEPSQLPHCPSVSPSAQPWTHPGQSQLF 60
M+ K +L L L++ITIFAL VLL GG SQ PHCPSVS AQPW HPGQSQLF
Sbjct: 1 MHLKIVLAFLALSLITIFALAYVLLTSPGGS----SQPPHCPSVSHRAQPWPHPGQSQLF 56
Query: 61 ADLSREELTAVMRFLTQRLGPGLVDAAQARPSDNCVFSVELQLPPKAAALAHLDRGSPPP 120
ADLSREELTAVMRFLTQRLGPGLVDAAQA+PSDNC+FSVELQLPPKAAALAHLDRGSPPP
Sbjct: 57 ADLSREELTAVMRFLTQRLGPGLVDAAQAQPSDNCIFSVELQLPPKAAALAHLDRGSPPP 116
Query: 121 AREALAIVFFGRQPQPNVSELVVGPLPHPSYMRDVTVERHGGPLPYHRRPVLFQEYLDID 180
AREALAIV FG QPQPNVSELVVGPLPHPSYMRDVTVERHGGPLPYHRRPVL E+ +
Sbjct: 117 AREALAIVLFGGQPQPNVSELVVGPLPHPSYMRDVTVERHGGPLPYHRRPVLRAEFTQMW 176
Query: 181 QMIFNRELPQASGLLHHCCFYKHRGRNLVTMTTAPRGLQSGDRATWFGLYYNISGAGFFL 240
+ + ELP+A L + + G L + PRGL+SGDRATW LY+NISG G FL
Sbjct: 177 RHLKEVELPKAPIFLSST--FNYNGSTLAAVHATPRGLRSGDRATWMALYHNISGVGLFL 234
Query: 241 HHVGLELLVNHKALDPARWTIQKVFYQGRYYDSLAQLEAQFEAGLVNVVLIPDNGTGGSW 300
H VGLELL++H+ALDPA WT+Q+VFY G YY L QLE +F++G + VV +P G+
Sbjct: 235 HPVGLELLLDHRALDPAHWTVQQVFYLGHYYADLGQLEREFKSGRLEVVRVPLPPPNGAS 294
Query: 301 SLKSPVPPGPAPPLQFYPQGPRFSVQGSRVASSLWTFSFGLGAFSGPRIFDVRFQGERLV 360
SL+S PGP PPLQF PQG ++SVQG+ V SSLW+F+FG G FSG RIFDVRFQGER+
Sbjct: 295 SLRSRNSPGPLPPLQFSPQGSQYSVQGNLVVSSLWSFTFGHGVFSGLRIFDVRFQGERIA 354
Query: 361 YEISLQEALAIYGGNSPAAMTTRYVDGGFGMGKYTTPLTRGVDCPYLATYVDWHFLLESQ 420
YE+S+QE ++IYG +SP M TRY+D FG+G+ + L RGVDCPY AT VD H L+
Sbjct: 355 YEVSVQECVSIYGADSPKTMLTRYLDSSFGLGRNSRGLVRGVDCPYQATMVDIHILVGKG 414
Query: 421 APKTIRDAFCVFEQNQGLPLRRHHSDLYSHYFGGLAETVLVVRSMSTLLNYDYVWDTVFH 480
A + + A CVFE+ QGLPLRRHH+ L +H++GGLA + LVVRS+S++ NYDY+WD V +
Sbjct: 415 AVQLLPGAVCVFEEAQGLPLRRHHNYLQNHFYGGLASSALVVRSVSSVGNYDYIWDFVLY 474
Query: 481 PSGAIEIRFYATGYISSAFLFGATG--KYGNQVSEHTLGTVHTHSAHFKVDLDVAGLENW 538
P+GA+E R +ATGYI++AFL G +GN+V E LGTVHTH+ HFK+DLDVAGL+NW
Sbjct: 475 PNGALEGRVHATGYINTAFLKGGEEGLLFGNRVGERVLGTVHTHAFHFKLDLDVAGLKNW 534
Query: 539 VWAEDMVFVPMAVPWSPEHQLQRLQVTRKLLEMEEQAAFLVGSATPRYLYLASNHSNKWG 598
V AED+VF P+A PW+PEH LQR Q+TR++L E+ AF +GS PRYLYLASN +N WG
Sbjct: 535 VVAEDVVFKPVAAPWNPEHWLQRPQLTRQVLGKEDLTAFSLGSPLPRYLYLASNQTNAWG 594
Query: 599 HPRGYRIQMLSFAGEPLPQNSSMARGFSWERYQLAVTQRKEEEPSSSSVFNQNDPWAPTV 658
H RG YQL VTQRKEEE SSS+++QND W PTV
Sbjct: 595 HQRG---------------------------YQLVVTQRKEEESQSSSIYHQNDIWTPTV 627
Query: 659 DFSDFINNETIAGKDLVAWVTAGFLHIPHAEDIPNTVTVGNGVGFFLRPYNFFDEDPSFY 718
F+DFINNET+ G+DLVAWVTA FLHIPHAEDIPNTVT+GN VGF LRPYNFFDEDPS +
Sbjct: 628 TFADFINNETLLGEDLVAWVTASFLHIPHAEDIPNTVTLGNRVGFLLRPYNFFDEDPSIF 687
Query: 719 SADSIYFRGDQDAGACEVNPLACLPQAAACAPDLPAFSHGGF 760
S S+YF QDAG C +NP+ACLP AAC PDLP FS+ GF
Sbjct: 688 SPGSVYFEKGQDAGLCSINPVACLPDLAACVPDLPPFSYHGF 729
>gi|73486661 amiloride binding protein 1 precursor [Homo sapiens]
Length = 751
Score = 529 bits (1362), Expect = e-150
Identities = 293/736 (39%), Positives = 417/736 (56%), Gaps = 38/736 (5%)
Query: 50 PWTHPGQSQLFADLSREELTAVMRFLTQRLGPGLVDAAQARPSDNCVFSVELQLPPKAAA 109
P T P ++ +F+DLS +EL AV FL + L ++ + N VF +E+ LP K
Sbjct: 23 PGTLPRKAGVFSDLSNQELKAVHSFLWSKKELRLQPSSTTTMAKNTVFLIEMLLPKKYHV 82
Query: 110 LAHLDRGSPPPAREALAIVFFGRQPQPNVSELVVGPLPHPSYMRDVTVERHGGPLPYHRR 169
L LD+G P REA A++FFG Q PNV+E VGPLP P YMR ++ R G + R
Sbjct: 83 LRFLDKGERHPVREARAVIFFGDQEHPNVTEFAVGPLPGPCYMRALS-PRPGYQSSWASR 141
Query: 170 PVLFQEYLDIDQMIFNRELPQASGLLHHC-------CFYKHRGRNLVTMTTAPRGLQSGD 222
P+ EY + L +A+ LH F R L APRG+ SG
Sbjct: 142 PISTAEYA-----LLYHTLQEATKPLHQFFLNTTGFSFQDCHDRCLAFTDVAPRGVASGQ 196
Query: 223 RATWFGLYYNISGAGFFLHHVGLELLVNHKALDPARWTIQKVFYQGRYYDSLAQLEAQFE 282
R +W + + G +FLH GLELLV+H + D W +++V+Y G++Y S +L ++
Sbjct: 197 RRSWLIIQRYVEG--YFLHPTGLELLVDHGSTDAGHWAVEQVWYNGKFYGSPEELARKYA 254
Query: 283 AGLVNVVLIPDNGTGGSWSLKSPVPP----------GPAP-----PLQFYPQGPRFSVQG 327
G V+VV++ D GG + PP P+P P P GPRF ++G
Sbjct: 255 DGEVDVVVLEDPLPGGKGHDSTEEPPLFSSHKPRGDFPSPIHVSGPRLVQPHGPRFRLEG 314
Query: 328 SRVASSLWTFSFGLGAFSGPRIFDVRFQGERLVYEISLQEALAIYGGNSPAAMTTRYVDG 387
+ V W+F+F L + SG ++ +V F GER+ YE+S+QEA+A+YGG++PA M T+Y+D
Sbjct: 315 NAVLYGGWSFAFRLRSSSGLQVLNVHFGGERIAYEVSVQEAVALYGGHTPAGMQTKYLDV 374
Query: 388 GFGMGKYTTPLTRGVDCPYLATYVDWHFLLESQAPKTIRDAFCVFEQNQGLPLRRHHSDL 447
G+G+G T L G+DCP AT++D ++ P A C+FE G+PLRRH +
Sbjct: 375 GWGLGSVTHELAPGIDCPETATFLDTFHYYDADDPVHYPRALCLFEMPTGVPLRRHFNSN 434
Query: 448 YS---HYFGGLAETVLVVRSMSTLLNYDYVWDTVFHPSGAIEIRFYATGYISSAFLFGAT 504
+ +++ GL VLV+R+ ST+ NYDY+WD +F+P+G +E + +ATGY+ + F
Sbjct: 435 FKGGFNFYAGLKGQVLVLRTTSTVYNYDYIWDFIFYPNGVMEAKMHATGYVHATFYTPEG 494
Query: 505 GKYGNQVSEHTLGTVHTHSAHFKVDLDVAGLENWVWAEDMVFVPMAVPWSPEHQLQRLQV 564
++G ++ H +G +HTH H++VDLDVAG +N M + PWSP H++ + +
Sbjct: 495 LRHGTRLHTHLIGNIHTHLVHYRVDLDVAGTKNSFQTLQMKLENITNPWSPRHRVVQPTL 554
Query: 565 TRKLLEMEEQAAFLVGSATPRYLYLASNHSNKWGHPRGYRIQMLSFAGEPLPQNSSMARG 624
+ E QAAF P+YL S N WGH R YR+Q+ S A + LP +
Sbjct: 555 EQTQYSWERQAAFRFKRKLPKYLLFTSPQENPWGHKRTYRLQIHSMADQVLPPGWQEEQA 614
Query: 625 FSWERYQLAVTQRKEEEPSSSSVFNQNDPWAPTVDFSDFI-NNETIAGKDLVAWVTAGFL 683
+W RY LAVT+ +E E SSS+++QNDPW P V F F+ NNE I +DLVAWVT GFL
Sbjct: 615 ITWARYPLAVTKYRESELCSSSIYHQNDPWHPPVVFEQFLHNNENIENEDLVAWVTVGFL 674
Query: 684 HIPHAEDIPNTVTVGNGVGFFLRPYNFFDEDPSFYSADSIYFRGDQDAGACEVNPLACLP 743
HIPH+EDIPNT T GN VGF LRP+NFF EDPS S D++ +D G V +P
Sbjct: 675 HIPHSEDIPNTATPGNSVGFLLRPFNFFPEDPSLASRDTVIV-WPRDNGPNYVQ--RWIP 731
Query: 744 QAAACAPDLPAFSHGG 759
+ C+ P FS+ G
Sbjct: 732 EDRDCSMP-PPFSYNG 746
>gi|18379346 VPS10 domain receptor protein SORCS 3 [Homo sapiens]
Length = 1222
Score = 34.3 bits (77), Expect = 0.44
Identities = 33/116 (28%), Positives = 47/116 (40%), Gaps = 8/116 (6%)
Query: 587 LYLASNHSNKWGHPRGYRIQMLS--FAGEPLPQNSSMARGFSWERYQLAVTQRKEEEPSS 644
L LA + GH + +LS F G + R W V KE+E
Sbjct: 1110 LTLAPLVDSSAGHSSSAMLMLLSVVFVGLAVFLIYKFKRKIPWINIYAQVQHDKEQEMIG 1169
Query: 645 SSVFNQNDPWAPTVDFSDFINNETIAGKDLVAWVTAGFLHIPHAE---DIPNTVTV 697
S ++N AP + SDF E + K+L V G I ++E +IPN +V
Sbjct: 1170 SVSQSEN---APKITLSDFTEPEELLDKELDTRVIGGIATIANSESTKEIPNCTSV 1222
>gi|18959276 forkhead box D4-like 1 [Homo sapiens]
Length = 408
Score = 32.3 bits (72), Expect = 1.7
Identities = 31/127 (24%), Positives = 46/127 (36%), Gaps = 23/127 (18%)
Query: 55 GQSQLFADLSREELTAVMRFLTQRLGPGLVDAAQAR------------PSDNCVFSVELQ 102
G+ + ++ EE A +FL Q L PGL A PSD F E +
Sbjct: 31 GEEEDEDEVEDEEEEASQKFLEQSLQPGLQVARWGGVALPREHIEGGGPSDPSEFGTEFR 90
Query: 103 LPPKAAALAHLDRGSPPPAREALAIVFFGRQPQPNVSELVVGPLPHPSYMRDVTVERHGG 162
PP++AA + R P +A++ + + PH G
Sbjct: 91 APPRSAAASEDARQPAKPPYSYIALI-----------TMAILQSPHKRLTLSGICAFISG 139
Query: 163 PLPYHRR 169
PY+RR
Sbjct: 140 RFPYYRR 146
>gi|40353727 synaptopodin isoform A [Homo sapiens]
Length = 903
Score = 31.2 bits (69), Expect = 3.8
Identities = 47/159 (29%), Positives = 57/159 (35%), Gaps = 28/159 (17%)
Query: 27 GRGGDGGEPSQLPHCPSVSPS--------AQPWT--HPGQSQLFADLSREELTAVMRFLT 76
GRG P LP P +SPS +P T P QL A L+R + A R
Sbjct: 711 GRGSSMSSPPPLPPPPPMSPSWSERSVSPLRPETEARPPSRQLQALLARNIINAARR--- 767
Query: 77 QRLGPGLVDAAQARPSDNCVFSVELQLPPKAAALAHLDR-GSPPPAREALAIVFFGRQPQ 135
+ P A RP FS PP R SP PAR A V
Sbjct: 768 KSASPRSAGAENPRP-----FSPPRAPPPPPPPPPPPPRMRSPQPARPGSAAV------- 815
Query: 136 PNVSELVVGPLPHPSYMRDVTVERHGGPLPYHRRPVLFQ 174
P + + P P+ T R PLP RP L++
Sbjct: 816 PGAAFAPIPRSPLPAGPSSCTSPR--SPLPAPPRPFLYR 852
>gi|75677594 forkhead box D4 [Homo sapiens]
Length = 439
Score = 31.2 bits (69), Expect = 3.8
Identities = 23/76 (30%), Positives = 31/76 (40%), Gaps = 13/76 (17%)
Query: 66 EELTAVMRFLTQRLGPGLVDA-------------AQARPSDNCVFSVELQLPPKAAALAH 112
EE A +FL Q L PGL A PSD F E + PP++AA +
Sbjct: 38 EEEAASQQFLEQSLQPGLQVARWGGVALPREHIEGGGGPSDPSEFGTEFRAPPRSAAASE 97
Query: 113 LDRGSPPPAREALAIV 128
R P +A++
Sbjct: 98 DARQPAKPPSSYIALI 113
>gi|21450729 hypothetical protein LOC219833 [Homo sapiens]
Length = 145
Score = 31.2 bits (69), Expect = 3.8
Identities = 17/42 (40%), Positives = 20/42 (47%)
Query: 299 SWSLKSPVPPGPAPPLQFYPQGPRFSVQGSRVASSLWTFSFG 340
SW L + + P P Q P G SV+ SSLW FS G
Sbjct: 25 SWELDNVLMPSPRIWPQVTPTGRSASVRSEGNTSSLWNFSAG 66
>gi|226059159 prostaglandin reductase 1 isoform 1 [Homo sapiens]
Length = 329
Score = 30.8 bits (68), Expect = 4.9
Identities = 19/84 (22%), Positives = 40/84 (47%), Gaps = 3/84 (3%)
Query: 239 FLHHVGLELLVNHKALDPARWTIQKVFYQGR--YYDSLAQLEAQFEAGLVNVV-LIPDNG 295
+L +G +++ N+K ++ T++K G Y+D++ + G + I G
Sbjct: 181 YLQKLGFDVVFNYKTVESLEETLKKASPDGYDCYFDNVGGEFSNTVIGQMKKFGRIAICG 240
Query: 296 TGGSWSLKSPVPPGPAPPLQFYPQ 319
+++ P+PPGP P + Y +
Sbjct: 241 AISTYNRTGPLPPGPPPEIVIYQE 264
>gi|226059133 prostaglandin reductase 1 isoform 1 [Homo sapiens]
Length = 329
Score = 30.8 bits (68), Expect = 4.9
Identities = 19/84 (22%), Positives = 40/84 (47%), Gaps = 3/84 (3%)
Query: 239 FLHHVGLELLVNHKALDPARWTIQKVFYQGR--YYDSLAQLEAQFEAGLVNVV-LIPDNG 295
+L +G +++ N+K ++ T++K G Y+D++ + G + I G
Sbjct: 181 YLQKLGFDVVFNYKTVESLEETLKKASPDGYDCYFDNVGGEFSNTVIGQMKKFGRIAICG 240
Query: 296 TGGSWSLKSPVPPGPAPPLQFYPQ 319
+++ P+PPGP P + Y +
Sbjct: 241 AISTYNRTGPLPPGPPPEIVIYQE 264
>gi|226056130 prostaglandin reductase 1 isoform 2 [Homo sapiens]
Length = 301
Score = 30.8 bits (68), Expect = 4.9
Identities = 19/84 (22%), Positives = 40/84 (47%), Gaps = 3/84 (3%)
Query: 239 FLHHVGLELLVNHKALDPARWTIQKVFYQGR--YYDSLAQLEAQFEAGLVNVV-LIPDNG 295
+L +G +++ N+K ++ T++K G Y+D++ + G + I G
Sbjct: 181 YLQKLGFDVVFNYKTVESLEETLKKASPDGYDCYFDNVGGEFSNTVIGQMKKFGRIAICG 240
Query: 296 TGGSWSLKSPVPPGPAPPLQFYPQ 319
+++ P+PPGP P + Y +
Sbjct: 241 AISTYNRTGPLPPGPPPEIVIYQE 264
>gi|45592959 LIM domain binding 3 isoform 1 [Homo sapiens]
Length = 727
Score = 30.8 bits (68), Expect = 4.9
Identities = 38/143 (26%), Positives = 52/143 (36%), Gaps = 16/143 (11%)
Query: 31 DGGEPSQLPHCPSVSPSAQPWTHPGQSQ---LFADLSREELTAVMRFLTQRLGPGLVDAA 87
D P + P+V+ S+ P TH S+ A R TA +R + P A+
Sbjct: 359 DSPRPQASSYSPAVAASSAPATHTSYSEGPAAPAPKPRVVTTASIRPSVYQPVP----AS 414
Query: 88 QARPSDNCVFSVELQLPPKAAALAHLDRGSPPPAREALAIVFFGRQPQPNVSELVVGPLP 147
PS +S P A A SP PA + + P P + P P
Sbjct: 415 TYSPSPGANYSPTPYTPSPAPAYT----PSPAPAYTPSPVPTYTPSPAPAYT-----PSP 465
Query: 148 HPSYMRDVTVERHGGPLPYHRRP 170
P+Y +V GGP RP
Sbjct: 466 APNYNPAPSVAYSGGPAEPASRP 488
>gi|118344450 cell death inducing protein [Homo sapiens]
Length = 208
Score = 30.8 bits (68), Expect = 4.9
Identities = 10/15 (66%), Positives = 12/15 (80%)
Query: 307 PPGPAPPLQFYPQGP 321
PPGP PP+ +YP GP
Sbjct: 85 PPGPHPPMGYYPPGP 99
>gi|157042770 forkhead box D4-like 3 [Homo sapiens]
Length = 417
Score = 30.4 bits (67), Expect = 6.4
Identities = 30/128 (23%), Positives = 46/128 (35%), Gaps = 24/128 (18%)
Query: 55 GQSQLFADLSREELTAVMRFLTQRLGPGLVDA-------------AQARPSDNCVFSVEL 101
G+ + ++ EE A +FL Q L PGL A PSD F +
Sbjct: 31 GEEEDEDEVEDEEEAASQQFLEQSLQPGLQVARWGGVALPREHIEGGGGPSDPSEFGTKF 90
Query: 102 QLPPKAAALAHLDRGSPPPAREALAIVFFGRQPQPNVSELVVGPLPHPSYMRDVTVERHG 161
+ PP++AA + R P +A++ + + PH
Sbjct: 91 RAPPRSAAASEDARQPAKPPYSYIALI-----------TMAILQNPHKRLTLSGICAFIS 139
Query: 162 GPLPYHRR 169
G PY+RR
Sbjct: 140 GRFPYYRR 147
>gi|146262007 forkhead box D4-like 6 [Homo sapiens]
Length = 417
Score = 30.4 bits (67), Expect = 6.4
Identities = 30/128 (23%), Positives = 46/128 (35%), Gaps = 24/128 (18%)
Query: 55 GQSQLFADLSREELTAVMRFLTQRLGPGLVDA-------------AQARPSDNCVFSVEL 101
G+ + ++ EE A +FL Q L PGL A PSD F +
Sbjct: 31 GEEEDEDEVEDEEEAASQQFLEQSLQPGLQVARWGGVALPREHIEGGGGPSDPSEFGTKF 90
Query: 102 QLPPKAAALAHLDRGSPPPAREALAIVFFGRQPQPNVSELVVGPLPHPSYMRDVTVERHG 161
+ PP++AA + R P +A++ + + PH
Sbjct: 91 RAPPRSAAASEDARQPAKPPYSYIALI-----------TMAILQNPHKRLTLSGICAFIS 139
Query: 162 GPLPYHRR 169
G PY+RR
Sbjct: 140 GRFPYYRR 147
>gi|22749049 Leber congenital amaurosis 5-like [Homo sapiens]
Length = 670
Score = 30.4 bits (67), Expect = 6.4
Identities = 21/81 (25%), Positives = 35/81 (43%), Gaps = 6/81 (7%)
Query: 37 QLPHCPSVSPSAQPWTHPGQSQLFADLSREELTAVMRFLTQRLGPGLVDAAQARPSDNCV 96
++PHC + P + + + DLS EE ++ L + G D + + N
Sbjct: 408 EIPHCVNKLPKQED-----SKRKYEDLSGEEKHLEVQILLENTGRQK-DKKEDQEKKNIF 461
Query: 97 FSVELQLPPKAAALAHLDRGS 117
E +LPPK + H +R S
Sbjct: 462 VKEEQELPPKIIEVIHPERES 482
>gi|21704287 sialidase 4 [Homo sapiens]
Length = 496
Score = 30.0 bits (66), Expect = 8.4
Identities = 26/84 (30%), Positives = 35/84 (41%), Gaps = 15/84 (17%)
Query: 242 HVGLELLVNHKALDPARWTIQKVFYQG-RYYDSLAQLEAQFEAGLVNVVLIPDNGTGGSW 300
H+G+ L + LDP WT V Y+G Y LA + E GLV L ++G S+
Sbjct: 403 HMGIRL--SQSPLDPRSWTEPWVIYEGPSGYSDLASIGPAPEGGLVFACLY-ESGARTSY 459
Query: 301 -----------SLKSPVPPGPAPP 313
+ VP P PP
Sbjct: 460 DEISFCTFSLREVLENVPASPKPP 483
>gi|10863987 zona pellucida glycoprotein 4 preproprotein [Homo
sapiens]
Length = 540
Score = 30.0 bits (66), Expect = 8.4
Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
Query: 632 LAVT-QRKEEEPSSSSVFNQNDPWAPTVDFSDFINNETIAGKDLVAWVTAGFLH 684
LAV+ Q K E P SSV + PW+ F+ +N E + L+AW G LH
Sbjct: 15 LAVSGQHKPEAPDYSSVLHCG-PWS--FQFAVNLNQEATSPPVLIAWDNQGLLH 65
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.138 0.438
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,908,222
Number of Sequences: 37866
Number of extensions: 1695184
Number of successful extensions: 5073
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 5044
Number of HSP's gapped (non-prelim): 23
length of query: 763
length of database: 18,247,518
effective HSP length: 110
effective length of query: 653
effective length of database: 14,082,258
effective search space: 9195714474
effective search space used: 9195714474
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.