Guide to the Human Genome
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Name: AOC2 Sequence: fasta or formatted (729aa) NCBI GI: 60498982
Description:

amine oxidase, copper containing 2 isoform a

Referenced in:

Histamine

Other entries for this name:
alt prot [756aa] amine oxidase, copper containing 2 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.5         55           3
 C cysteine            1.1          8           1
 D aspartate           4.0         29           1
 E glutamate           4.5         33           3
 F phenylalanine       5.2         38           2
 G glycine             8.4         61           2
 H histidine           4.1         30           2
 I isoleucine          2.9         21           1
 K lysine              1.9         14           1
 L leucine            12.2         89           3
 M methionine          1.0          7           1
 N asparagine          3.6         26           2
 P proline             8.0         58           3
 Q glutamine           4.7         34           2
 R arginine            5.6         41           2
 S serine              7.4         54           3
 T threonine           4.1         30           1
 V valine              8.6         63           2
 W tryptophan          1.6         12           1
 Y tyrosine            3.6         26           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   amine oxidase, copper containing 2 isoform a 
AOC2                  0.990   amine oxidase, copper containing 2 isoform b 
AOC3                  0.646   amine oxidase, copper containing 3 precursor 
ABP1                  0.329   amiloride binding protein 1 precursor 
TTC18                 0.005   tetratricopeptide repeat domain 18 
NCOA2                 0.005   nuclear receptor coactivator 2 
FOXD4L1               0.005   forkhead box D4-like 1 
DLG5                  0.004   discs large homolog 5 
RUSC1                 0.004   RUN and SH3 domain containing 1 isoform b 
RUSC1                 0.004   RUN and SH3 domain containing 1 isoform a 
FOXD4                 0.004   forkhead box D4 
LOC100131102          0.003   PREDICTED: hypothetical protein 
FNDC1                 0.003   fibronectin type III domain containing 1 
SCYL3                 0.003   SCY1-like 3 isoform 2 
SCYL3                 0.003   SCY1-like 3 isoform 1 
KIAA0913              0.003   hypothetical protein LOC23053 
FOXD4L3               0.003   forkhead box D4-like 3 
FOXD4L6               0.003   forkhead box D4-like 6 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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