Search of human proteins with 44680108

Search of human proteins with 44680108

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|44680108 calcipressin 1 isoform b [Homo sapiens]
         (117 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|33620725 calcipressin 1 isoform a [Homo sapiens]                   244   1e-65
gi|44680110 calcipressin 1 isoform c [Homo sapiens]                   244   1e-65
gi|44680108 calcipressin 1 isoform b [Homo sapiens]                   244   1e-65
gi|116256477 Down syndrome critical region gene 1-like 1 protein...   157   2e-39
gi|7305009 Down syndrome critical region gene 1-like 2 [Homo sap...   154   1e-38
gi|115648142 centrosomal protein 164kDa [Homo sapiens]                 32   0.14 
gi|112789536 troponin T3, skeletal, fast isoform 3 [Homo sapiens]      31   0.18 
gi|112789541 troponin T3, skeletal, fast isoform 4 [Homo sapiens]      31   0.18 
gi|51599156 chromodomain helicase DNA binding protein 4 [Homo sa...    31   0.24 
gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens]         31   0.24 
gi|133922600 splicing factor, arginine/serine-rich 16 [Homo sapi...    30   0.31 
gi|224465235 euchromatic histone-lysine N-methyltransferase 1 is...    30   0.53 
gi|224465233 euchromatic histone-lysine N-methyltransferase 1 is...    30   0.53 
gi|51593088 neuroligin 3 [Homo sapiens]                                30   0.53 
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi...    29   0.91 
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi...    29   0.91 
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi...    29   0.91 
gi|88759339 aster-associated protein [Homo sapiens]                    29   0.91 
gi|155030232 proline, glutamic acid and leucine rich protein 1 [...    28   1.2  
gi|158534059 formin binding protein 4 [Homo sapiens]                   28   1.2  
gi|33356174 pinin, desmosome associated protein [Homo sapiens]         28   1.6  
gi|7657214 hormonally upregulated Neu-associated kinase [Homo sa...    28   1.6  
gi|239741632 PREDICTED: hypothetical protein XP_002342252 [Homo ...    28   2.0  
gi|189491759 p21-activated kinase 3 isoform d [Homo sapiens]           28   2.0  
gi|189491757 p21-activated kinase 3 isoform c [Homo sapiens]           28   2.0  
gi|189491755 p21-activated kinase 3 isoform b [Homo sapiens]           28   2.0  
gi|189491753 p21-activated kinase 3 isoform a [Homo sapiens]           28   2.0  
gi|189491751 p21-activated kinase 3 isoform a [Homo sapiens]           28   2.0  
gi|4505601 p21-activated kinase 3 isoform a [Homo sapiens]             28   2.0  
gi|151301053 RNA binding motif protein 33 [Homo sapiens]               28   2.0  

>gi|33620725 calcipressin 1 isoform a [Homo sapiens]
          Length = 252

 Score =  244 bits (623), Expect = 1e-65
 Identities = 117/117 (100%), Positives = 117/117 (100%)

Query: 1   MKLYFAQTLHIGSSHLAPPNPDKQFLISPPASPPVGWKQVEDATPVINYDLLYAISKLGP 60
           MKLYFAQTLHIGSSHLAPPNPDKQFLISPPASPPVGWKQVEDATPVINYDLLYAISKLGP
Sbjct: 136 MKLYFAQTLHIGSSHLAPPNPDKQFLISPPASPPVGWKQVEDATPVINYDLLYAISKLGP 195

Query: 61  GEKYELHAATDTTPSVVVHVCESDQEKEEEEEMERMRRPKPKIIQTRRPEYTPIHLS 117
           GEKYELHAATDTTPSVVVHVCESDQEKEEEEEMERMRRPKPKIIQTRRPEYTPIHLS
Sbjct: 196 GEKYELHAATDTTPSVVVHVCESDQEKEEEEEMERMRRPKPKIIQTRRPEYTPIHLS 252


>gi|44680110 calcipressin 1 isoform c [Homo sapiens]
          Length = 197

 Score =  244 bits (623), Expect = 1e-65
 Identities = 117/117 (100%), Positives = 117/117 (100%)

Query: 1   MKLYFAQTLHIGSSHLAPPNPDKQFLISPPASPPVGWKQVEDATPVINYDLLYAISKLGP 60
           MKLYFAQTLHIGSSHLAPPNPDKQFLISPPASPPVGWKQVEDATPVINYDLLYAISKLGP
Sbjct: 81  MKLYFAQTLHIGSSHLAPPNPDKQFLISPPASPPVGWKQVEDATPVINYDLLYAISKLGP 140

Query: 61  GEKYELHAATDTTPSVVVHVCESDQEKEEEEEMERMRRPKPKIIQTRRPEYTPIHLS 117
           GEKYELHAATDTTPSVVVHVCESDQEKEEEEEMERMRRPKPKIIQTRRPEYTPIHLS
Sbjct: 141 GEKYELHAATDTTPSVVVHVCESDQEKEEEEEMERMRRPKPKIIQTRRPEYTPIHLS 197


>gi|44680108 calcipressin 1 isoform b [Homo sapiens]
          Length = 117

 Score =  244 bits (623), Expect = 1e-65
 Identities = 117/117 (100%), Positives = 117/117 (100%)

Query: 1   MKLYFAQTLHIGSSHLAPPNPDKQFLISPPASPPVGWKQVEDATPVINYDLLYAISKLGP 60
           MKLYFAQTLHIGSSHLAPPNPDKQFLISPPASPPVGWKQVEDATPVINYDLLYAISKLGP
Sbjct: 1   MKLYFAQTLHIGSSHLAPPNPDKQFLISPPASPPVGWKQVEDATPVINYDLLYAISKLGP 60

Query: 61  GEKYELHAATDTTPSVVVHVCESDQEKEEEEEMERMRRPKPKIIQTRRPEYTPIHLS 117
           GEKYELHAATDTTPSVVVHVCESDQEKEEEEEMERMRRPKPKIIQTRRPEYTPIHLS
Sbjct: 61  GEKYELHAATDTTPSVVVHVCESDQEKEEEEEMERMRRPKPKIIQTRRPEYTPIHLS 117


>gi|116256477 Down syndrome critical region gene 1-like 1 protein
           [Homo sapiens]
          Length = 197

 Score =  157 bits (396), Expect = 2e-39
 Identities = 77/117 (65%), Positives = 91/117 (77%), Gaps = 8/117 (6%)

Query: 1   MKLYFAQTLHIGSS----HLAPPNPDKQFLISPPASPPVGWKQVEDATPVINYDLLYAIS 56
           +KLYFAQ     +     HLAPP P KQFLISPP+SPPVGW+ + DATPV+NYDLLYA++
Sbjct: 81  LKLYFAQVQTPETDGDKLHLAPPQPAKQFLISPPSSPPVGWQPINDATPVLNYDLLYAVA 140

Query: 57  KLGPGEKYELHAATDTTPSVVVHVCESDQEKEEEEEMERMRRPKPKIIQTRRPEYTP 113
           KLGPGEKYELHA T++TPSVVVHVC+SD E+EE+ +      PKPKIIQTRRP   P
Sbjct: 141 KLGPGEKYELHAGTESTPSVVVHVCDSDIEEEEDPKTS----PKPKIIQTRRPGLPP 193


>gi|7305009 Down syndrome critical region gene 1-like 2 [Homo
           sapiens]
          Length = 241

 Score =  154 bits (390), Expect = 1e-38
 Identities = 79/114 (69%), Positives = 88/114 (77%), Gaps = 9/114 (7%)

Query: 1   MKLYFAQTLHIGS----SHLAPPNPDKQFLISPPASPPVGWKQVEDATPVINYDLLYAIS 56
           +KLYFAQ    G     S+L PP P KQFLISPPASPPVGWKQ EDA PVINYDLL A+S
Sbjct: 117 LKLYFAQVQMSGEVRDKSYLLPPQPVKQFLISPPASPPVGWKQSEDAMPVINYDLLCAVS 176

Query: 57  KLGPGEKYELHAATDTTPSVVVHVCESDQEKEEEEEMERMRRPKPKIIQTRRPE 110
           KLGPGEKYELHA T++TPSVVVHVCES+ E+EEE      + PK KI QTRRP+
Sbjct: 177 KLGPGEKYELHAGTESTPSVVVHVCESETEEEEE-----TKNPKQKIAQTRRPD 225


>gi|115648142 centrosomal protein 164kDa [Homo sapiens]
          Length = 1460

 Score = 31.6 bits (70), Expect = 0.14
 Identities = 27/110 (24%), Positives = 44/110 (40%), Gaps = 16/110 (14%)

Query: 6   AQTLHIGSSHLAPPNPDKQFLISPPASPPVGWKQVEDATPVINYDLLYAISKLGPGEKYE 65
           +Q   +G       +P+++  +SP  +PPV   +V    PV             P E+  
Sbjct: 544 SQAEELGPGQEEAEDPEEKVAVSP--TPPVS-PEVRSTEPV------------APPEQLS 588

Query: 66  LHAATDTTPSVVVHVCESDQEKEEEEEMERMRRPKPKIIQTRRPEYTPIH 115
             AA       V  V E DQ    E + E+M++ + K+ Q    E   +H
Sbjct: 589 -EAALKAMEEAVAQVLEQDQRHLLESKQEKMQQLREKLCQEEEEEILRLH 637


>gi|112789536 troponin T3, skeletal, fast isoform 3 [Homo sapiens]
          Length = 250

 Score = 31.2 bits (69), Expect = 0.18
 Identities = 11/29 (37%), Positives = 20/29 (68%)

Query: 82  ESDQEKEEEEEMERMRRPKPKIIQTRRPE 110
           E ++E +EEEE++   +P+PK+   + PE
Sbjct: 14  EEEEEAQEEEEVQEEEKPRPKLTAPKIPE 42


>gi|112789541 troponin T3, skeletal, fast isoform 4 [Homo sapiens]
          Length = 250

 Score = 31.2 bits (69), Expect = 0.18
 Identities = 11/29 (37%), Positives = 20/29 (68%)

Query: 82  ESDQEKEEEEEMERMRRPKPKIIQTRRPE 110
           E ++E +EEEE++   +P+PK+   + PE
Sbjct: 14  EEEEEAQEEEEVQEEEKPRPKLTAPKIPE 42


>gi|51599156 chromodomain helicase DNA binding protein 4 [Homo
            sapiens]
          Length = 1912

 Score = 30.8 bits (68), Expect = 0.24
 Identities = 26/82 (31%), Positives = 39/82 (47%), Gaps = 10/82 (12%)

Query: 17   APPNPDKQFLISPPASPPVGWKQVEDATPVINYDLLYAISKLGPG--EKYELHAATDTTP 74
            AP + D++ ++ PP     G ++VE A      +        G    EK E  +A D TP
Sbjct: 1599 APASEDEKVVVEPPE----GEEKVEKAEVKERTEEPMETEPKGAADVEKVEEKSAIDLTP 1654

Query: 75   SVVVHVCESDQEKEEEEEMERM 96
             VV    E  +EK+EEEE + +
Sbjct: 1655 IVV----EDKEEKKEEEEKKEV 1672


>gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens]
          Length = 1312

 Score = 30.8 bits (68), Expect = 0.24
 Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 6/82 (7%)

Query: 13  SSHLAPPNPDKQFLISPPASPPVGWKQVEDATPVINYDLLYAISKLGPGEKYELHAATDT 72
           SS  +PP P       PPA P     + +   P    D  Y+     P +KY+    T +
Sbjct: 203 SSSPSPPPPPP-----PPAPPAPPAPRFDIYDPFHPTDEAYSPPP-APEQKYDPFEPTGS 256

Query: 73  TPSVVVHVCESDQEKEEEEEME 94
            PS        ++E+EEEEE E
Sbjct: 257 NPSSSAGTPSPEEEEEEEEEEE 278


>gi|133922600 splicing factor, arginine/serine-rich 16 [Homo
           sapiens]
          Length = 674

 Score = 30.4 bits (67), Expect = 0.31
 Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 2/80 (2%)

Query: 19  PNPDKQFLISPPASPPVGWKQVEDATPVINYDLLYAISKLGPGEKYELHAATDTTPSVVV 78
           P+P ++ L  P ASP VG ++++   P    +   A  KL P EK +L            
Sbjct: 534 PSPAREKLTRPAASPAVG-EKLKKTEPAAGKETGAAKPKLTPQEKLKLRMQKALNRQFKA 592

Query: 79  HVCESDQEKEEEEEMERMRR 98
              ++ QEK  ++E ER  R
Sbjct: 593 DK-KAAQEKMIQQEHERQER 611


>gi|224465235 euchromatic histone-lysine N-methyltransferase 1
           isoform 2 [Homo sapiens]
          Length = 808

 Score = 29.6 bits (65), Expect = 0.53
 Identities = 27/99 (27%), Positives = 40/99 (40%), Gaps = 14/99 (14%)

Query: 6   AQTLHIGSSHLAPPNPDKQFLISPPASPPVGWKQVEDATPVINYDLLYAISKL-GPGEKY 64
           A+TL  G+     P+   Q   +PPA+   G    ED              KL  PG   
Sbjct: 152 AKTLPGGAGKGRTPSAFPQTPAAPPATLGEGSADTEDR-------------KLPAPGADV 198

Query: 65  ELHAATDTTPSVVVHVCESDQEKEEEEEMERMRRPKPKI 103
           ++H A  T P  VV +  + ++  E  E    + PK +I
Sbjct: 199 KVHRARKTMPKSVVGLHAASKDPREVREARDHKEPKEEI 237


>gi|224465233 euchromatic histone-lysine N-methyltransferase 1
           isoform 1 [Homo sapiens]
          Length = 1298

 Score = 29.6 bits (65), Expect = 0.53
 Identities = 27/99 (27%), Positives = 40/99 (40%), Gaps = 14/99 (14%)

Query: 6   AQTLHIGSSHLAPPNPDKQFLISPPASPPVGWKQVEDATPVINYDLLYAISKL-GPGEKY 64
           A+TL  G+     P+   Q   +PPA+   G    ED              KL  PG   
Sbjct: 152 AKTLPGGAGKGRTPSAFPQTPAAPPATLGEGSADTEDR-------------KLPAPGADV 198

Query: 65  ELHAATDTTPSVVVHVCESDQEKEEEEEMERMRRPKPKI 103
           ++H A  T P  VV +  + ++  E  E    + PK +I
Sbjct: 199 KVHRARKTMPKSVVGLHAASKDPREVREARDHKEPKEEI 237


>gi|51593088 neuroligin 3 [Homo sapiens]
          Length = 828

 Score = 29.6 bits (65), Expect = 0.53
 Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 3/35 (8%)

Query: 10  HIGSSHLAPPNPDKQFLISPPASPPVGWKQVEDAT 44
           ++G  + APP  +K+FL   P  PP  W  + +AT
Sbjct: 69  YLGVPYAAPPIGEKRFL---PPEPPPSWSGIRNAT 100


>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
           sapiens]
          Length = 855

 Score = 28.9 bits (63), Expect = 0.91
 Identities = 12/18 (66%), Positives = 13/18 (72%)

Query: 18  PPNPDKQFLISPPASPPV 35
           PP+P  Q   SPPASPPV
Sbjct: 443 PPSPPVQAPFSPPASPPV 460



 Score = 25.8 bits (55), Expect = 7.7
 Identities = 13/23 (56%), Positives = 15/23 (65%), Gaps = 4/23 (17%)

Query: 16  LAPPNPDK----QFLISPPASPP 34
           LAPP+P      Q L SPPA+PP
Sbjct: 340 LAPPSPSAPPSLQTLPSPPATPP 362


>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
           sapiens]
          Length = 1124

 Score = 28.9 bits (63), Expect = 0.91
 Identities = 12/18 (66%), Positives = 13/18 (72%)

Query: 18  PPNPDKQFLISPPASPPV 35
           PP+P  Q   SPPASPPV
Sbjct: 668 PPSPPVQAPFSPPASPPV 685



 Score = 25.8 bits (55), Expect = 7.7
 Identities = 13/23 (56%), Positives = 15/23 (65%), Gaps = 4/23 (17%)

Query: 16  LAPPNPDK----QFLISPPASPP 34
           LAPP+P      Q L SPPA+PP
Sbjct: 343 LAPPSPSAPPSLQTLPSPPATPP 365


>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
           sapiens]
          Length = 816

 Score = 28.9 bits (63), Expect = 0.91
 Identities = 12/18 (66%), Positives = 13/18 (72%)

Query: 18  PPNPDKQFLISPPASPPV 35
           PP+P  Q   SPPASPPV
Sbjct: 404 PPSPPVQAPFSPPASPPV 421


>gi|88759339 aster-associated protein [Homo sapiens]
          Length = 647

 Score = 28.9 bits (63), Expect = 0.91
 Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 1/46 (2%)

Query: 63  KYELHAATDTTPSVVVHVCESDQEKEEEEEMERMR-RPKPKIIQTR 107
           K E   A D    +VV      Q K+EE E ++++ +PKP+I+  +
Sbjct: 111 KNEEEMAPDGCEDIVVKSFSESQNKDEEFEKDKIKMKPKPRILSIK 156


>gi|155030232 proline, glutamic acid and leucine rich protein 1 [Homo
            sapiens]
          Length = 1130

 Score = 28.5 bits (62), Expect = 1.2
 Identities = 23/89 (25%), Positives = 34/89 (38%), Gaps = 9/89 (10%)

Query: 17   APPNPDKQFLISPPASPPVGWKQVEDATPVINYDLLYAISKLGPGEKYELHAATDTTPSV 76
            APP P     + PP SPP    + E         LL  + + G  E+       DT P++
Sbjct: 976  APPPPTLPPALPPPESPPKVQPEPEPEP-----GLLLEVEEPGTEEE----RGADTAPTL 1026

Query: 77   VVHVCESDQEKEEEEEMERMRRPKPKIIQ 105
                  S  E E E E      P  ++++
Sbjct: 1027 APEALPSQGEVEREGESPAAGPPPQELVE 1055


>gi|158534059 formin binding protein 4 [Homo sapiens]
          Length = 1017

 Score = 28.5 bits (62), Expect = 1.2
 Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 4/46 (8%)

Query: 68  AATDTTPSVVVHVCESDQEKEEEEE----MERMRRPKPKIIQTRRP 109
           AAT TT +V       D   E+E+E    + R+ +  PK + T RP
Sbjct: 53  AATTTTTAVTAAAASDDSPSEDEQEAVQEVPRVVQNPPKPVMTTRP 98


>gi|33356174 pinin, desmosome associated protein [Homo sapiens]
          Length = 717

 Score = 28.1 bits (61), Expect = 1.6
 Identities = 12/35 (34%), Positives = 20/35 (57%)

Query: 79  HVCESDQEKEEEEEMERMRRPKPKIIQTRRPEYTP 113
           +V   D EKE EE+ E+   P+P+ +   +P+  P
Sbjct: 448 NVSALDMEKESEEKEEKESEPQPEPVAQPQPQSQP 482


>gi|7657214 hormonally upregulated Neu-associated kinase [Homo
           sapiens]
          Length = 714

 Score = 28.1 bits (61), Expect = 1.6
 Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 4/62 (6%)

Query: 52  LYAISKL-GPGEKYELHAATDT-TPSVVVHVCESDQEKEEEEEMERMRRPKPKIIQTRRP 109
           LY I K   P E YE  A+ DT T  +  H  +  + KE+E+  + + RP  K +    P
Sbjct: 405 LYQIEKYRAPKESYE--ASLDTWTRDLEFHAVQDKKPKEQEKRGDFLHRPFSKKLDKNLP 462

Query: 110 EY 111
            +
Sbjct: 463 SH 464


>gi|239741632 PREDICTED: hypothetical protein XP_002342252 [Homo
           sapiens]
          Length = 494

 Score = 27.7 bits (60), Expect = 2.0
 Identities = 12/31 (38%), Positives = 21/31 (67%), Gaps = 1/31 (3%)

Query: 73  TPSVVVHVCESDQEKEEE-EEMERMRRPKPK 102
           TP++   VC +D  +EEE EE+E+ ++ + K
Sbjct: 55  TPALAAEVCVNDNHREEEAEEVEQQQQQQKK 85


>gi|189491759 p21-activated kinase 3 isoform d [Homo sapiens]
          Length = 559

 Score = 27.7 bits (60), Expect = 2.0
 Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 2/30 (6%)

Query: 83  SDQEKEEEEEMERMRRPKPKIIQTRRPEYT 112
           S++E EEEEE E    P P I    RPE+T
Sbjct: 186 SEEEDEEEEEEEDENEPPPVI--APRPEHT 213


>gi|189491757 p21-activated kinase 3 isoform c [Homo sapiens]
          Length = 565

 Score = 27.7 bits (60), Expect = 2.0
 Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 2/30 (6%)

Query: 83  SDQEKEEEEEMERMRRPKPKIIQTRRPEYT 112
           S++E EEEEE E    P P I    RPE+T
Sbjct: 192 SEEEDEEEEEEEDENEPPPVI--APRPEHT 219


>gi|189491755 p21-activated kinase 3 isoform b [Homo sapiens]
          Length = 580

 Score = 27.7 bits (60), Expect = 2.0
 Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 2/30 (6%)

Query: 83  SDQEKEEEEEMERMRRPKPKIIQTRRPEYT 112
           S++E EEEEE E    P P I    RPE+T
Sbjct: 207 SEEEDEEEEEEEDENEPPPVI--APRPEHT 234


>gi|189491753 p21-activated kinase 3 isoform a [Homo sapiens]
          Length = 544

 Score = 27.7 bits (60), Expect = 2.0
 Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 2/30 (6%)

Query: 83  SDQEKEEEEEMERMRRPKPKIIQTRRPEYT 112
           S++E EEEEE E    P P I    RPE+T
Sbjct: 171 SEEEDEEEEEEEDENEPPPVI--APRPEHT 198


>gi|189491751 p21-activated kinase 3 isoform a [Homo sapiens]
          Length = 544

 Score = 27.7 bits (60), Expect = 2.0
 Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 2/30 (6%)

Query: 83  SDQEKEEEEEMERMRRPKPKIIQTRRPEYT 112
           S++E EEEEE E    P P I    RPE+T
Sbjct: 171 SEEEDEEEEEEEDENEPPPVI--APRPEHT 198


>gi|4505601 p21-activated kinase 3 isoform a [Homo sapiens]
          Length = 544

 Score = 27.7 bits (60), Expect = 2.0
 Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 2/30 (6%)

Query: 83  SDQEKEEEEEMERMRRPKPKIIQTRRPEYT 112
           S++E EEEEE E    P P I    RPE+T
Sbjct: 171 SEEEDEEEEEEEDENEPPPVI--APRPEHT 198


>gi|151301053 RNA binding motif protein 33 [Homo sapiens]
          Length = 1170

 Score = 27.7 bits (60), Expect = 2.0
 Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 6/36 (16%)

Query: 82  ESDQEKEEEEEMERMRRPKPKIIQTRRPEYTPIHLS 117
           ESD+E+E++EE  R+R       +T R E T I LS
Sbjct: 204 ESDEEEEDDEESGRLR------FKTERKEGTIIRLS 233


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.313    0.132    0.395 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,135,050
Number of Sequences: 37866
Number of extensions: 302288
Number of successful extensions: 2382
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 40
Number of HSP's that attempted gapping in prelim test: 2120
Number of HSP's gapped (non-prelim): 244
length of query: 117
length of database: 18,247,518
effective HSP length: 87
effective length of query: 30
effective length of database: 14,953,176
effective search space: 448595280
effective search space used: 448595280
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.