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Search of human proteins with 126723149
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|126723149 chromosome 19 open reading frame 29 [Homo sapiens]
(758 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|126723149 chromosome 19 open reading frame 29 [Homo sapiens] 1536 0.0
gi|122937392 chromosome 19 open reading frame 29 [Homo sapiens] 1536 0.0
gi|21361282 splicing factor, arginine/serine-rich 4 [Homo sapiens] 79 2e-14
gi|148746195 trichohyalin [Homo sapiens] 76 1e-13
gi|239754909 PREDICTED: hypothetical protein [Homo sapiens] 75 2e-13
gi|4759100 splicing factor, arginine/serine-rich 11 [Homo sapiens] 75 2e-13
gi|239747134 PREDICTED: hypothetical protein XP_002343921 [Homo ... 75 3e-13
gi|116008442 zinc finger CCCH-type containing 13 [Homo sapiens] 74 5e-13
gi|41327773 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Homo sapi... 72 2e-12
gi|55741709 RNA binding motif protein 25 [Homo sapiens] 72 2e-12
gi|117938251 BCL2-associated transcription factor 1 isoform 2 [H... 72 2e-12
gi|169218320 PREDICTED: similar to BCL2-associated transcription... 71 3e-12
gi|239756241 PREDICTED: golgi autoantigen, golgin subfamily a-li... 71 4e-12
gi|239745095 PREDICTED: hypothetical protein LOC645202 [Homo sap... 71 4e-12
gi|117938254 BCL2-associated transcription factor 1 isoform 3 [H... 71 4e-12
gi|7661958 BCL2-associated transcription factor 1 isoform 1 [Hom... 71 4e-12
gi|239745089 PREDICTED: golgi autoantigen, golgin subfamily a-li... 70 6e-12
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 70 6e-12
gi|239747891 PREDICTED: hypothetical protein [Homo sapiens] 70 9e-12
gi|134152708 arginine and glutamate rich 1 [Homo sapiens] 70 9e-12
gi|239756568 PREDICTED: similar to BCL2-associated transcription... 69 1e-11
gi|224548936 hypothetical protein LOC100170229 [Homo sapiens] 69 2e-11
gi|133922600 splicing factor, arginine/serine-rich 16 [Homo sapi... 69 2e-11
gi|116089325 splicing factor, arginine/serine-rich 12 isoform a ... 67 5e-11
gi|21040255 splicing factor, arginine/serine-rich 12 isoform b [... 67 5e-11
gi|222446603 golgi autoantigen, golgin subfamily a-like [Homo sa... 67 6e-11
gi|41327771 DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Homo sapi... 67 8e-11
gi|221139764 PHD and ring finger domains 1 [Homo sapiens] 65 2e-10
gi|239749449 PREDICTED: hypothetical protein [Homo sapiens] 65 2e-10
gi|38146113 arginine/serine-rich coiled-coil 2 isoform b [Homo s... 65 2e-10
>gi|126723149 chromosome 19 open reading frame 29 [Homo sapiens]
Length = 758
Score = 1536 bits (3976), Expect = 0.0
Identities = 758/758 (100%), Positives = 758/758 (100%)
Query: 1 MGRDTRSRSRSAGRRGRRRQSQSGSRSRSRSHGRRNRRRREDEGRRRRRRRSRERRSDSE 60
MGRDTRSRSRSAGRRGRRRQSQSGSRSRSRSHGRRNRRRREDEGRRRRRRRSRERRSDSE
Sbjct: 1 MGRDTRSRSRSAGRRGRRRQSQSGSRSRSRSHGRRNRRRREDEGRRRRRRRSRERRSDSE 60
Query: 61 EERWQRSGMRSRSPPRPKWHSRDGSSQSDSGEEQSRGQWARRRRRARSWSPSSSASSSAS 120
EERWQRSGMRSRSPPRPKWHSRDGSSQSDSGEEQSRGQWARRRRRARSWSPSSSASSSAS
Sbjct: 61 EERWQRSGMRSRSPPRPKWHSRDGSSQSDSGEEQSRGQWARRRRRARSWSPSSSASSSAS 120
Query: 121 PGRSQSPRAAAAALSQQQSLQERLRLREERKQQEELMKAFETPEEKRARRLAKKEAKERK 180
PGRSQSPRAAAAALSQQQSLQERLRLREERKQQEELMKAFETPEEKRARRLAKKEAKERK
Sbjct: 121 PGRSQSPRAAAAALSQQQSLQERLRLREERKQQEELMKAFETPEEKRARRLAKKEAKERK 180
Query: 181 KREKMGWGEEYMGYTNTDNPFGDNNLLGTFIWNKALEKKGISHLEEKELKERNKRIQEDN 240
KREKMGWGEEYMGYTNTDNPFGDNNLLGTFIWNKALEKKGISHLEEKELKERNKRIQEDN
Sbjct: 181 KREKMGWGEEYMGYTNTDNPFGDNNLLGTFIWNKALEKKGISHLEEKELKERNKRIQEDN 240
Query: 241 RLELQKVKQLRLEREREKAMREQELEMLQREKEAEHFKTWEEQEDNFHLQQAKLRSKIRI 300
RLELQKVKQLRLEREREKAMREQELEMLQREKEAEHFKTWEEQEDNFHLQQAKLRSKIRI
Sbjct: 241 RLELQKVKQLRLEREREKAMREQELEMLQREKEAEHFKTWEEQEDNFHLQQAKLRSKIRI 300
Query: 301 RDGRAKPIDLLAKYISAEDDDLAVEMHEPYTFLNGLTVADMEDLLEDIQVYMELEQGKNA 360
RDGRAKPIDLLAKYISAEDDDLAVEMHEPYTFLNGLTVADMEDLLEDIQVYMELEQGKNA
Sbjct: 301 RDGRAKPIDLLAKYISAEDDDLAVEMHEPYTFLNGLTVADMEDLLEDIQVYMELEQGKNA 360
Query: 361 DFWRDMTTITEDEISKLRKLEASGKGPGERREGVNASVSSDVQSVFKGKTYNQLQVIFQG 420
DFWRDMTTITEDEISKLRKLEASGKGPGERREGVNASVSSDVQSVFKGKTYNQLQVIFQG
Sbjct: 361 DFWRDMTTITEDEISKLRKLEASGKGPGERREGVNASVSSDVQSVFKGKTYNQLQVIFQG 420
Query: 421 IEGKIRAGGPNLDMGYWESLLQQLRAHMARARLRERHQDVLRQKLYKLKQEQGVESEPLF 480
IEGKIRAGGPNLDMGYWESLLQQLRAHMARARLRERHQDVLRQKLYKLKQEQGVESEPLF
Sbjct: 421 IEGKIRAGGPNLDMGYWESLLQQLRAHMARARLRERHQDVLRQKLYKLKQEQGVESEPLF 480
Query: 481 PILKQEPQSPSRSLEPEDAAPTPPGPSSEGGPAEAEVDGATPTEGDGDGDGEGEGEGEAV 540
PILKQEPQSPSRSLEPEDAAPTPPGPSSEGGPAEAEVDGATPTEGDGDGDGEGEGEGEAV
Sbjct: 481 PILKQEPQSPSRSLEPEDAAPTPPGPSSEGGPAEAEVDGATPTEGDGDGDGEGEGEGEAV 540
Query: 541 LMEEDLIQQSLDDYDAGRYSPRLLTAHELPLDAHVLEPDEDLQRLQLSRQQLQVTGDASE 600
LMEEDLIQQSLDDYDAGRYSPRLLTAHELPLDAHVLEPDEDLQRLQLSRQQLQVTGDASE
Sbjct: 541 LMEEDLIQQSLDDYDAGRYSPRLLTAHELPLDAHVLEPDEDLQRLQLSRQQLQVTGDASE 600
Query: 601 SAEDIFFRRAKEGMGQDEAQFSVEMPLTGKAYLWADKYRPRKPRFFNRVHTGFEWNKYNQ 660
SAEDIFFRRAKEGMGQDEAQFSVEMPLTGKAYLWADKYRPRKPRFFNRVHTGFEWNKYNQ
Sbjct: 601 SAEDIFFRRAKEGMGQDEAQFSVEMPLTGKAYLWADKYRPRKPRFFNRVHTGFEWNKYNQ 660
Query: 661 THYDFDNPPPKIVQGYKFNIFYPDLIDKRSTPEYFLEACADNKDFAILRFHAGPPYEDIA 720
THYDFDNPPPKIVQGYKFNIFYPDLIDKRSTPEYFLEACADNKDFAILRFHAGPPYEDIA
Sbjct: 661 THYDFDNPPPKIVQGYKFNIFYPDLIDKRSTPEYFLEACADNKDFAILRFHAGPPYEDIA 720
Query: 721 FKIVNREWEYSHRHGFRCQFANGIFQLWFHFKRYRYRR 758
FKIVNREWEYSHRHGFRCQFANGIFQLWFHFKRYRYRR
Sbjct: 721 FKIVNREWEYSHRHGFRCQFANGIFQLWFHFKRYRYRR 758
>gi|122937392 chromosome 19 open reading frame 29 [Homo sapiens]
Length = 758
Score = 1536 bits (3976), Expect = 0.0
Identities = 758/758 (100%), Positives = 758/758 (100%)
Query: 1 MGRDTRSRSRSAGRRGRRRQSQSGSRSRSRSHGRRNRRRREDEGRRRRRRRSRERRSDSE 60
MGRDTRSRSRSAGRRGRRRQSQSGSRSRSRSHGRRNRRRREDEGRRRRRRRSRERRSDSE
Sbjct: 1 MGRDTRSRSRSAGRRGRRRQSQSGSRSRSRSHGRRNRRRREDEGRRRRRRRSRERRSDSE 60
Query: 61 EERWQRSGMRSRSPPRPKWHSRDGSSQSDSGEEQSRGQWARRRRRARSWSPSSSASSSAS 120
EERWQRSGMRSRSPPRPKWHSRDGSSQSDSGEEQSRGQWARRRRRARSWSPSSSASSSAS
Sbjct: 61 EERWQRSGMRSRSPPRPKWHSRDGSSQSDSGEEQSRGQWARRRRRARSWSPSSSASSSAS 120
Query: 121 PGRSQSPRAAAAALSQQQSLQERLRLREERKQQEELMKAFETPEEKRARRLAKKEAKERK 180
PGRSQSPRAAAAALSQQQSLQERLRLREERKQQEELMKAFETPEEKRARRLAKKEAKERK
Sbjct: 121 PGRSQSPRAAAAALSQQQSLQERLRLREERKQQEELMKAFETPEEKRARRLAKKEAKERK 180
Query: 181 KREKMGWGEEYMGYTNTDNPFGDNNLLGTFIWNKALEKKGISHLEEKELKERNKRIQEDN 240
KREKMGWGEEYMGYTNTDNPFGDNNLLGTFIWNKALEKKGISHLEEKELKERNKRIQEDN
Sbjct: 181 KREKMGWGEEYMGYTNTDNPFGDNNLLGTFIWNKALEKKGISHLEEKELKERNKRIQEDN 240
Query: 241 RLELQKVKQLRLEREREKAMREQELEMLQREKEAEHFKTWEEQEDNFHLQQAKLRSKIRI 300
RLELQKVKQLRLEREREKAMREQELEMLQREKEAEHFKTWEEQEDNFHLQQAKLRSKIRI
Sbjct: 241 RLELQKVKQLRLEREREKAMREQELEMLQREKEAEHFKTWEEQEDNFHLQQAKLRSKIRI 300
Query: 301 RDGRAKPIDLLAKYISAEDDDLAVEMHEPYTFLNGLTVADMEDLLEDIQVYMELEQGKNA 360
RDGRAKPIDLLAKYISAEDDDLAVEMHEPYTFLNGLTVADMEDLLEDIQVYMELEQGKNA
Sbjct: 301 RDGRAKPIDLLAKYISAEDDDLAVEMHEPYTFLNGLTVADMEDLLEDIQVYMELEQGKNA 360
Query: 361 DFWRDMTTITEDEISKLRKLEASGKGPGERREGVNASVSSDVQSVFKGKTYNQLQVIFQG 420
DFWRDMTTITEDEISKLRKLEASGKGPGERREGVNASVSSDVQSVFKGKTYNQLQVIFQG
Sbjct: 361 DFWRDMTTITEDEISKLRKLEASGKGPGERREGVNASVSSDVQSVFKGKTYNQLQVIFQG 420
Query: 421 IEGKIRAGGPNLDMGYWESLLQQLRAHMARARLRERHQDVLRQKLYKLKQEQGVESEPLF 480
IEGKIRAGGPNLDMGYWESLLQQLRAHMARARLRERHQDVLRQKLYKLKQEQGVESEPLF
Sbjct: 421 IEGKIRAGGPNLDMGYWESLLQQLRAHMARARLRERHQDVLRQKLYKLKQEQGVESEPLF 480
Query: 481 PILKQEPQSPSRSLEPEDAAPTPPGPSSEGGPAEAEVDGATPTEGDGDGDGEGEGEGEAV 540
PILKQEPQSPSRSLEPEDAAPTPPGPSSEGGPAEAEVDGATPTEGDGDGDGEGEGEGEAV
Sbjct: 481 PILKQEPQSPSRSLEPEDAAPTPPGPSSEGGPAEAEVDGATPTEGDGDGDGEGEGEGEAV 540
Query: 541 LMEEDLIQQSLDDYDAGRYSPRLLTAHELPLDAHVLEPDEDLQRLQLSRQQLQVTGDASE 600
LMEEDLIQQSLDDYDAGRYSPRLLTAHELPLDAHVLEPDEDLQRLQLSRQQLQVTGDASE
Sbjct: 541 LMEEDLIQQSLDDYDAGRYSPRLLTAHELPLDAHVLEPDEDLQRLQLSRQQLQVTGDASE 600
Query: 601 SAEDIFFRRAKEGMGQDEAQFSVEMPLTGKAYLWADKYRPRKPRFFNRVHTGFEWNKYNQ 660
SAEDIFFRRAKEGMGQDEAQFSVEMPLTGKAYLWADKYRPRKPRFFNRVHTGFEWNKYNQ
Sbjct: 601 SAEDIFFRRAKEGMGQDEAQFSVEMPLTGKAYLWADKYRPRKPRFFNRVHTGFEWNKYNQ 660
Query: 661 THYDFDNPPPKIVQGYKFNIFYPDLIDKRSTPEYFLEACADNKDFAILRFHAGPPYEDIA 720
THYDFDNPPPKIVQGYKFNIFYPDLIDKRSTPEYFLEACADNKDFAILRFHAGPPYEDIA
Sbjct: 661 THYDFDNPPPKIVQGYKFNIFYPDLIDKRSTPEYFLEACADNKDFAILRFHAGPPYEDIA 720
Query: 721 FKIVNREWEYSHRHGFRCQFANGIFQLWFHFKRYRYRR 758
FKIVNREWEYSHRHGFRCQFANGIFQLWFHFKRYRYRR
Sbjct: 721 FKIVNREWEYSHRHGFRCQFANGIFQLWFHFKRYRYRR 758
>gi|21361282 splicing factor, arginine/serine-rich 4 [Homo sapiens]
Length = 494
Score = 78.6 bits (192), Expect = 2e-14
Identities = 60/190 (31%), Positives = 99/190 (52%), Gaps = 13/190 (6%)
Query: 3 RDTRSRSRSAGRRGRRRQSQSGSRSRSRSHGRRNRRRREDEGRRRRRR----RSRERRSD 58
+ + S+SRS R G R +S+S SRS+SRS ++ + R + + R R +SR + D
Sbjct: 212 KSSHSKSRSRSRSGSRSRSKSRSRSQSRSRSKKEKSRSPSKEKSRSRSHSAGKSRSKSKD 271
Query: 59 SEEERWQRSG----MRSRSPPRPKWHSRDGS-SQSDSGEEQSRGQWARRRRRARSWSPSS 113
EE+ Q + +SRSP R K S+ S SQ EE+ RG +R R + +S S
Sbjct: 272 QAEEKIQNNDNVGKPKSRSPSRHKSKSKSRSRSQERRVEEEKRGSVSRGRSQEKSLRQSR 331
Query: 114 SASSSASPGRSQSPRAAAAALSQQQSLQERLRLREERKQQEELMKAFETPEEKRARRLAK 173
S S S RS+S R+ + + +++ R R REE + + E ++ ++R +K
Sbjct: 332 SRSRSKGGSRSRS-RSRSKSKDKRKG---RKRSREESRSRSRSRSKSERSRKRGSKRDSK 387
Query: 174 KEAKERKKRE 183
+ ++KK+E
Sbjct: 388 AGSSKKKKKE 397
Score = 63.5 bits (153), Expect = 7e-10
Identities = 81/338 (23%), Positives = 131/338 (38%), Gaps = 53/338 (15%)
Query: 2 GRDTRSRSRSAGRRGRRRQSQSGSRSRSRSHGRRNRRRREDEGRRRRRRRSRERRSDSEE 61
GR R G R RR S+S S SRSRS R +R+ R G + RS
Sbjct: 167 GRKIRLVEDKPGSRRRRSYSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSRS---- 222
Query: 62 ERWQRSGMRSRSPPRPKWHSRDGS----SQSDSGEE-QSRGQWARRRR------------ 104
RSG RSRS R + SR S S+S S E+ +SR A + R
Sbjct: 223 ----RSGSRSRSKSRSRSQSRSRSKKEKSRSPSKEKSRSRSHSAGKSRSKSKDQAEEKIQ 278
Query: 105 ------RARSWSPSSSASSSASPGRSQSPR-------AAAAALSQQQSL-QERLRLREER 150
+ +S SPS S S S RSQ R + + SQ++SL Q R R R +
Sbjct: 279 NNDNVGKPKSRSPSRHKSKSKSRSRSQERRVEEEKRGSVSRGRSQEKSLRQSRSRSRSKG 338
Query: 151 KQQEELMKAFETPEEKRARRLAKKEAKERKKREKMGWGEEYMGYTNTDNPFGDNNLLGTF 210
+ ++ ++++ R+ +++E++ R + G + D+ G +
Sbjct: 339 GSRSRSRSRSKSKDKRKGRKRSREESRSRSRSRSKSERSRKRG-SKRDSKAGSS------ 391
Query: 211 IWNKALEKKGISHLEEKELKERNKRIQEDNRLELQKVKQLRLEREREKAMREQELEMLQR 270
+KK + + + ++ + ++ + Q E E A QE R
Sbjct: 392 ------KKKKKEDTDRSQSRSPSRSVSKEREHAKSESSQREGRGESENAGTNQETRSRSR 445
Query: 271 -EKEAEHFKTWEEQEDNFHLQQAKLRSKIRIRDGRAKP 307
+++ E + + + + RSK R R P
Sbjct: 446 SNSKSKPNLPSESRSRSKSASKTRSRSKSRSRSASRSP 483
Score = 59.7 bits (143), Expect = 1e-08
Identities = 57/164 (34%), Positives = 82/164 (50%), Gaps = 32/164 (19%)
Query: 3 RDTRSRSRSAGRRGRRRQSQSGSRSRSRSHGRRNRRRREDEGRRRRRRRSRERRS----- 57
R +RSRSRS G G R +S+S S+S+ + R+ R+R +E R R R RS+ RS
Sbjct: 328 RQSRSRSRSKG--GSRSRSRSRSKSKDK---RKGRKRSREESRSRSRSRSKSERSRKRGS 382
Query: 58 ----------DSEEERWQRSGMR--SRSPPRPKWHSRDGSSQSDS-GEEQSRGQWARRRR 104
++E RS R SRS + + H++ SSQ + GE ++ G R
Sbjct: 383 KRDSKAGSSKKKKKEDTDRSQSRSPSRSVSKEREHAKSESSQREGRGESENAGTNQETRS 442
Query: 105 RARSWSPSS--------SASSSASPGRSQS-PRAAAAALSQQQS 139
R+RS S S S S SAS RS+S R+ +A+ S +S
Sbjct: 443 RSRSNSKSKPNLPSESRSRSKSASKTRSRSKSRSRSASRSPSRS 486
Score = 55.5 bits (132), Expect = 2e-07
Identities = 48/149 (32%), Positives = 70/149 (46%), Gaps = 29/149 (19%)
Query: 5 TRSRSRSAGRRGRRRQSQSGSRSRSRSHGRRNRRRREDEGRRRRRRRSRERRSDSEEERW 64
+RSRS+S +R R++S+ SRSRSRS + R R+ R + S++++ + +
Sbjct: 344 SRSRSKSKDKRKGRKRSREESRSRSRSRSKSERSRKRGSKRDSKAGSSKKKKKEDTDRSQ 403
Query: 65 QRSGMRSRSPPRPKWHSRDGSSQSDS-GEEQSRG--QWARRRRRA--------------- 106
RS RS S R H++ SSQ + GE ++ G Q R R R+
Sbjct: 404 SRSPSRSVSKERE--HAKSESSQREGRGESENAGTNQETRSRSRSNSKSKPNLPSESRSR 461
Query: 107 ---------RSWSPSSSASSSASPGRSQS 126
RS S S SAS S S RS+S
Sbjct: 462 SKSASKTRSRSKSRSRSASRSPSRSRSRS 490
Score = 52.0 bits (123), Expect = 2e-06
Identities = 59/249 (23%), Positives = 110/249 (44%), Gaps = 22/249 (8%)
Query: 32 HGRRNRRRREDEGRRRRRRRSRERRSDSEEERWQRSGMRSRSPPRPKWHSRDGSSQSDSG 91
+GR+ R + G RRRR SR R S RSRS K SR GSS+S
Sbjct: 166 NGRKIRLVEDKPGSRRRRSYSRSR---------SHSRSRSRSRHSRKSRSRSGSSKSSHS 216
Query: 92 EEQSRGQWARRRRRARSWSPSSSASSSASPGRSQSPRAAAAALSQQQSLQERLRLREERK 151
+ +SR R +RS S S S S S S + + R+ + S+ +S + +
Sbjct: 217 KSRSRS-----RSGSRSRSKSRSRSQSRSRSKKEKSRSPSKEKSRSRSHSAGKSRSKSKD 271
Query: 152 QQEELMKAFETPEEKRARRLA--KKEAKERKKREKMGWGEEYMGYTNTDNPFGDNNLLGT 209
Q EE ++ + + ++R + K ++K R + ++ EE G + + +L +
Sbjct: 272 QAEEKIQNNDNVGKPKSRSPSRHKSKSKSRSRSQERRVEEEKRGSVSRGRS-QEKSLRQS 330
Query: 210 FIWNKA---LEKKGISHLEEKELKERNKRIQEDNRLELQKVKQLRLEREREKAMREQELE 266
+++ + S + K+ ++ KR +E++R + + + ER R++ +
Sbjct: 331 RSRSRSKGGSRSRSRSRSKSKDKRKGRKRSREESRSRSR--SRSKSERSRKRGSKRDSKA 388
Query: 267 MLQREKEAE 275
++K+ E
Sbjct: 389 GSSKKKKKE 397
Score = 43.1 bits (100), Expect = 0.001
Identities = 42/140 (30%), Positives = 57/140 (40%), Gaps = 37/140 (26%)
Query: 5 TRSRSRSAGRRGRRR----------------------QSQSGSRS--RSRSHGRRNRRRR 40
+RSRSRS R R+R QS+S SRS + R H + +R
Sbjct: 366 SRSRSRSKSERSRKRGSKRDSKAGSSKKKKKEDTDRSQSRSPSRSVSKEREHAKSESSQR 425
Query: 41 EDEGRRRRRRRSRERRSDSEEERWQRSGMRSRSPPRPKWHSRDGSSQSDSGEEQSRGQWA 100
E G ++E RS S RS S +P S S + + +SR +
Sbjct: 426 EGRGESENAGTNQETRSRS----------RSNSKSKPNLPSESRSRSKSASKTRSR---S 472
Query: 101 RRRRRARSWSPSSSASSSAS 120
+ R R+ S SPS S S S S
Sbjct: 473 KSRSRSASRSPSRSRSRSHS 492
Score = 33.9 bits (76), Expect = 0.58
Identities = 22/52 (42%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 3 RDTRSRSRSAGRRGRRRQSQSGSRSRSRSHGR-RNRRRREDEGRRRRRRRSR 53
++TRSRSRS + S+S SRS+S S R R++ R R R RSR
Sbjct: 438 QETRSRSRSNSKSKPNLPSESRSRSKSASKTRSRSKSRSRSASRSPSRSRSR 489
Score = 31.2 bits (69), Expect = 3.7
Identities = 20/37 (54%), Positives = 25/37 (67%), Gaps = 6/37 (16%)
Query: 4 DTRSRSRSAGR-RGR-----RRQSQSGSRSRSRSHGR 34
++RSRS+SA + R R R S+S SRSRSRSH R
Sbjct: 457 ESRSRSKSASKTRSRSKSRSRSASRSPSRSRSRSHSR 493
Score = 30.4 bits (67), Expect = 6.4
Identities = 16/27 (59%), Positives = 18/27 (66%)
Query: 5 TRSRSRSAGRRGRRRQSQSGSRSRSRS 31
TRSRS+S R R S+S SRS SRS
Sbjct: 468 TRSRSKSRSRSASRSPSRSRSRSHSRS 494
>gi|148746195 trichohyalin [Homo sapiens]
Length = 1943
Score = 76.3 bits (186), Expect = 1e-13
Identities = 73/301 (24%), Positives = 134/301 (44%), Gaps = 35/301 (11%)
Query: 3 RDTRSRSRSAGRRGRRRQSQSGSRSRSRSHGRRNRRRREDEGRRRRR--RRSRERRSDSE 60
++ + R R+ RR+ Q + + R + RR+++E RR ++ RR ++ R + +
Sbjct: 272 QEEEEQLRKLERQELRRERQEEEQQQQRLRREQQLRRKQEEERREQQEERREQQERREQQ 331
Query: 61 EERWQRSGMRSRSPPRPKWHSRDGSSQSDSGEEQSRGQWARRRRRARSWSPSSSASSSAS 120
EER ++ R + R + R+ Q + EQ + RR +
Sbjct: 332 EERREQQLRREQEERREQQLRRE---QEEERREQQLRREQEEERREQQLRREQQLRREQQ 388
Query: 121 PGRSQSPRAAAAALSQQQSLQERLRLREERKQQEELMKAFETPEEKRARRLAKKEAKERK 180
R Q R L ++Q L+ +LR E++ + E E EE+ ++ ++ ++R
Sbjct: 389 LRREQQLR-REQQLRREQQLRREQQLRREQQLRREQQLRREQEEERHEQKHEQERREQRL 447
Query: 181 KREKMGWGEEYMGYTNTDNPFGDNNLLGTFIWNKALEKKGISHLEEKELKERNKRIQEDN 240
KRE+ EE W K E+ E++ K++ KR QE+
Sbjct: 448 KREQ----EERRD------------------WLKREEE--TERHEQERRKQQLKRDQEEE 483
Query: 241 RLELQKVKQLRLEREREKAMREQELEMLQREKEAEHFKTWEEQEDNFHLQQAKLRSKIRI 300
R E + L+LE E + +E+ + L+RE+E + + QE+ LQQ +LRS+ ++
Sbjct: 484 RRE----RWLKLEEEERREQQERREQQLRREQEERREQRLKRQEEEERLQQ-RLRSEQQL 538
Query: 301 R 301
R
Sbjct: 539 R 539
Score = 65.5 bits (158), Expect = 2e-10
Identities = 82/314 (26%), Positives = 133/314 (42%), Gaps = 50/314 (15%)
Query: 3 RDTRSRSRSAGRRGRRRQSQSGSRSRSRSHGRRNRRRREDEGRRRRRRRSRERRSD---- 58
+ R R R + R R Q + R+ R R R E+E + +RRR+ RER +
Sbjct: 776 KSERGRQRLSARPPLREQRERQLRAEERQQ-REQRFLPEEEEKEQRRRQRREREKELQFL 834
Query: 59 SEEERWQRSGMRSRSPPRPKWHSRDGSSQSDSGEEQSRGQWARRRRRARSWSPSSSASSS 118
EEE+ QR R + DG + +E+ R Q RR ++ R W
Sbjct: 835 EEEEQLQR-----RERAQQLQEEEDGLQED---QERRRSQEQRRDQKWR-WQLEEERKR- 884
Query: 119 ASPGRSQSPRAAAAALSQQQSLQERLRLREERKQQEELMKAFETPEEKRARRLAKKEAKE 178
R + A A Q + Q+ L+ EE Q+EE K +E++ R + + +E
Sbjct: 885 ----RRHTLYAKPALQEQLRKEQQLLQEEEEELQREEREKRRRQEQERQYREEEQLQQEE 940
Query: 179 ----RKKREKMGWGEEYMGYTNTDNPFGDNNLLGTFIWNKALEKKGISHL----EEKELK 230
R++REK E Y +K L++K L E++ +
Sbjct: 941 EQLLREEREKRRRQERERQYRK----------------DKKLQQKEEQLLGEEPEKRRRQ 984
Query: 231 ERNKRIQEDNRLELQKVKQLRLEREREKAMREQELEMLQREKEAEHFKTWEEQEDNFHLQ 290
ER K+ +E+ L+ ++ + LR ERE+ R QE E R+K+ + +E+E +
Sbjct: 985 EREKKYREEEELQQEEEQLLREEREKR---RRQEWERQYRKKD----ELQQEEEQLLREE 1037
Query: 291 QAKLRSKIRIRDGR 304
+ K R + R R R
Sbjct: 1038 REKRRLQERERQYR 1051
Score = 63.9 bits (154), Expect = 5e-10
Identities = 71/297 (23%), Positives = 127/297 (42%), Gaps = 46/297 (15%)
Query: 2 GRDTRSRSRSAGRRG---RRRQSQSGSRSRSRSHGRRNRRRREDEGRRRRRRRSRERRSD 58
G D R+R G+ RRQ + R R+R+ E+ G+RRR++R + R
Sbjct: 94 GLDEEKRARCDGKESLLQDRRQEED-----QRRFEPRDRQLEEEPGQRRRQKRQEQEREL 148
Query: 59 SEEERWQRSGMRSRSPPRPKWHSRDGSSQSDSGEEQSRGQWARRRRRARSWSPSSSASSS 118
+E E +S + + RD + D + R +W R R +
Sbjct: 149 AEGE--------EQSEKQERLEQRD-RQRRDEELWRQRQEWQEREERR-----AEEEQLQ 194
Query: 119 ASPGRSQSPRAAAAALSQQQSLQERLRLREERKQQ--EELMKAFETPEEKRARRLAKKEA 176
+ G L +++ L+ R + REE++QQ E + F+ EEK R K+E
Sbjct: 195 SCKGHETEEFPDEEQLRRRELLELRRKGREEKQQQRRERQDRVFQEEEEKEWR---KRET 251
Query: 177 KERKKREKMGWGEEYMGYTNTDNPFGDNNLLGTFIWNKALEKKGISHLEEKELKERN--- 233
RK+ EK+ + P L + LE++ + ++E +++
Sbjct: 252 VLRKEEEKL----------QEEEPQRQRELQEEEEQLRKLERQELRRERQEEEQQQQRLR 301
Query: 234 -----KRIQEDNRLELQKVKQLRLE-REREKAMREQELEMLQREKEAEHFKTWEEQE 284
+R QE+ R E Q+ ++ + E RE+++ REQ+L Q E+ + + +E+E
Sbjct: 302 REQQLRRKQEEERREQQEERREQQERREQQEERREQQLRREQEERREQQLRREQEEE 358
Score = 63.5 bits (153), Expect = 7e-10
Identities = 81/402 (20%), Positives = 162/402 (40%), Gaps = 37/402 (9%)
Query: 10 RSAGRRGRRRQSQSGSRSRSRSHGRRNRRRREDEGRRRRRRRSRERRSDSEEERWQRSGM 69
R + RR++ + R + RE+ +RRR+ R+ R + E ++ + +
Sbjct: 1125 REEREKRRRQELERQYREEEEVQQEEEQLLREEPEKRRRQELERQYREEEELQQEEEQLL 1184
Query: 70 RSRSPPRPKWHSRDGSSQSDSGEEQSRGQWARRRRRAR---SWSPSSSASSSASP----G 122
R R + R + + ++ + ++ +R+ W P + + G
Sbjct: 1185 REEQEKRRQERERQYREEEELQRQKRKQRYRDEDQRSDLKWQWEPEKENAVRDNKVYCKG 1244
Query: 123 RS-----QSPRAAAAALSQQQSLQERLRLREERKQQEELMKAFET----PEEKRARRLAK 173
R Q + QQ LQ L ++ER +++E + + PEE++ R +
Sbjct: 1245 RENEQFRQLEDSQLRDRQSQQDLQHLLGEQQERDREQERRRWQQRDRHFPEEEQLEREEQ 1304
Query: 174 KEAKERKKREK------MGWGEEYMGYTNTDNPFGDNNLLGTFIWNKALEKKGISHLEEK 227
KEAK R ++ + EE TD F + L + L ++ ++
Sbjct: 1305 KEAKRRDRKSQEEKQLLREEREEKRRRQETDRKFREEEQLLQEREEQPLRRQE----RDR 1360
Query: 228 ELKERNKRIQEDNRLELQKVKQLRL-EREREKAMREQELEMLQREKEAEHFKTWEEQEDN 286
+ +E R QE R L++ ++LR ERER+ EQ+L +RE++ + + +E+
Sbjct: 1361 KFREEELRHQEQGRKFLEEEQRLRRQERERKFLKEEQQLRCQEREQQLRQDRDRKFREEE 1420
Query: 287 FHLQQAKLRSKIRIRDGRAKPIDLLAKYISAEDDDLAVEMHEPYTFLNGLTVADMEDLLE 346
L + + K R + + + + K++ E+ L E H + + E LL+
Sbjct: 1421 QQLSRQERDRKFREEEQQVRRQERERKFLE-EEQQLRQERHRKF--------REEEQLLQ 1471
Query: 347 DIQVYMELEQGKNADFWRDMTTITEDEIS-KLRKLEASGKGP 387
+ + Q ++ F + + E K R+ E + P
Sbjct: 1472 EREEQQLHRQERDRKFLEEEQQLRRQERDRKFREQELRSQEP 1513
Score = 63.2 bits (152), Expect = 9e-10
Identities = 60/269 (22%), Positives = 111/269 (41%), Gaps = 26/269 (9%)
Query: 34 RRNRRRREDEGRRRRRRRSRERRSDSEEERWQRSGMRSRSPPRPKWHSRDGSSQSDSGEE 93
RR + + +E RR+++ R + + E+R +R R R K + + + EE
Sbjct: 629 RRQQLLKSEEQEERRQQQLRREQQERREQRLKREEEEERLEQRLKREHEEERREQELAEE 688
Query: 94 QSRGQWARRRRRARSWSPSSSASSSASPGRSQSPRAAAAALSQQQSLQERLRLREERKQQ 153
+ R + R W + + A + S ++Q +E+ R RE Q
Sbjct: 689 EQEQARERIKSRIPKWQWQLESEADARQSKVYSRPRKQEGQRRRQEQEEKRRRRESELQW 748
Query: 154 EELMKAFETPEEKRARRLAKKEAKERKKREKMGWGEEYMGYTNTDNPFGDNNLLGTFIWN 213
+E +A +E+ RR + + +K E+ G + +
Sbjct: 749 QEEERAHRQQQEEEQRRDFTWQWQAEEKSER---GRQRLSA------------------R 787
Query: 214 KALEKKGISHLEEKELKERNKRIQEDNRLELQKVKQLRLEREREKAMREQELEMLQREKE 273
L ++ L +E ++R +R + + Q+ +Q R ERE+E E+E E LQR +
Sbjct: 788 PPLREQRERQLRAEERQQREQRFLPEEEEKEQRRRQ-RREREKELQFLEEE-EQLQRRER 845
Query: 274 AEHFKTWEEQEDNFHLQQAKLRSKIRIRD 302
A+ +E+ED Q + RS+ + RD
Sbjct: 846 AQQL---QEEEDGLQEDQERRRSQEQRRD 871
Score = 62.8 bits (151), Expect = 1e-09
Identities = 74/309 (23%), Positives = 126/309 (40%), Gaps = 84/309 (27%)
Query: 8 RSRSAGRRGRRRQSQSGSRS----RSRSHGRRNRRRREDEGRRRRRRRSRERRSDSEEER 63
R + R + R+ Q R R R +R R ++ RR + RE+ EEE+
Sbjct: 497 REQQERREQQLRREQEERREQRLKRQEEEERLQQRLRSEQQLRREQEERREQLLKREEEK 556
Query: 64 WQRSGMRSRSPPRPKWHSRDGSSQSDSGEEQSRGQWARRRRRARSWSPSSSASSSASPGR 123
R + R + RD Q EE+ R Q +R + R
Sbjct: 557 RLEQERREQRLKREQEERRD---QLLKREEERRQQRLKREQEER---------------- 597
Query: 124 SQSPRAAAAALSQQQSLQERLRLREERKQQEELMKAFETPEEKRARRLAKKEAKERKKRE 183
L Q+ +E RL +E ++++ L + E PEE+R ++L K E +E ++++
Sbjct: 598 ----------LEQRLKREEVERLEQEERREQRLKR--EEPEEERRQQLLKSEEQEERRQQ 645
Query: 184 KMGWGEEYMGYTNTDNPFGDNNLLGTFIWNKALEKKGISHLEEKELKE-RNKRIQEDNRL 242
++ E++E +E R KR +E+ RL
Sbjct: 646 QL-------------------------------------RREQQERREQRLKREEEEERL 668
Query: 243 ELQKVKQLRLEREREKAMREQELEMLQREKEAEHFKT----WEEQ-EDNFHLQQAKLRSK 297
E RL+RE E+ REQEL ++E+ E K+ W+ Q E +Q+K+ S+
Sbjct: 669 E------QRLKREHEEERREQELAEEEQEQARERIKSRIPKWQWQLESEADARQSKVYSR 722
Query: 298 IRIRDGRAK 306
R ++G+ +
Sbjct: 723 PRKQEGQRR 731
Score = 61.2 bits (147), Expect = 3e-09
Identities = 70/326 (21%), Positives = 133/326 (40%), Gaps = 36/326 (11%)
Query: 4 DTRSRSRSAGRRGRRRQSQSGSRSRSRSHGRRNRRRREDEG---RRRRRRRSRERRSDS- 59
+ R RR R ++ Q R ++ +E+E + RRRS+E+R D
Sbjct: 814 EEEKEQRRRQRREREKELQFLEEEEQLQRRERAQQLQEEEDGLQEDQERRRSQEQRRDQK 873
Query: 60 -----EEERWQRSGMRSRSPPRPKWHSRDGSSQSDSGEEQSRGQWARRRRRARSWSPSSS 114
EEER +R P + ++ + EE R + R +RR +
Sbjct: 874 WRWQLEEERKRRRHTLYAKPALQEQLRKEQQLLQEEEEELQREE--REKRRRQEQERQYR 931
Query: 115 ASSSASPGRSQSPRAAAAALSQQQSLQERLRLREERKQQEELMKAFETPEEKRARRLAKK 174
Q R +Q+ +ER ++++ QQ+E E PE++R + KK
Sbjct: 932 EEEQLQQEEEQLLREEREKRRRQE--RERQYRKDKKLQQKEEQLLGEEPEKRRRQEREKK 989
Query: 175 EAKE--------------RKKREKMGWGEEYMGYTNTDNPFGDNNLLGTFIWNKALEKKG 220
+E R+KR + W +Y + LL + L+++
Sbjct: 990 YREEEELQQEEEQLLREEREKRRRQEWERQYRKKDELQQE--EEQLLREEREKRRLQERE 1047
Query: 221 ISHLEEKELKERNKRIQEDNR-------LELQKVKQLRLEREREKAMREQELEMLQREKE 273
+ EE+EL++ +++ + R LE Q K+ L++E E+ +RE+ + ++E+E
Sbjct: 1048 RQYREEEELQQEEEQLLGEERETRRRQELERQYRKEEELQQEEEQLLREEPEKRRRQERE 1107
Query: 274 AEHFKTWEEQEDNFHLQQAKLRSKIR 299
+ + E Q++ L + + + R
Sbjct: 1108 RQCREEEELQQEEEQLLREEREKRRR 1133
Score = 60.1 bits (144), Expect = 8e-09
Identities = 62/318 (19%), Positives = 126/318 (39%), Gaps = 43/318 (13%)
Query: 3 RDTRSRSRSAGRRGRRRQSQSG--------SRSRSRSHGRRNRRRREDEGRRRRRRRSRE 54
RD + RR ++RQ Q S + R R +RR E+ R+R+ + RE
Sbjct: 125 RDRQLEEEPGQRRRQKRQEQERELAEGEEQSEKQERLEQRDRQRRDEELWRQRQEWQERE 184
Query: 55 RRSDSEEERWQRSGMRSRS-PPRPKWHSRDGSSQSDSGEEQSRGQWARRRRRARSWSPSS 113
R EE+ G + P + R+ G E+ + Q R+ R
Sbjct: 185 ERRAEEEQLQSCKGHETEEFPDEEQLRRRELLELRRKGREEKQQQRRERQDRVFQEEEEK 244
Query: 114 SASSSASPGRSQSPRAAAAALSQQQSLQ---------ERLRLREERKQQEELMKAFETPE 164
+ R + + +Q+ LQ ER LR ER+++E+ + +
Sbjct: 245 EWRKRETVLRKEEEKLQEEEPQRQRELQEEEEQLRKLERQELRRERQEEEQQQQRLRREQ 304
Query: 165 EKRARRLAKKEAKERKKREKMGWGEEYMGYTNTDNPFGDNNLLGTFIWNKALEKKGISHL 224
+ R ++ ++ ++ ++RE+ E+ + ++ +
Sbjct: 305 QLRRKQEEERREQQEERREQQERREQ----------------------QEERREQQLRRE 342
Query: 225 EEKELKERNKRIQEDNRLELQKVKQLRLEREREKAMREQEL---EMLQREKEAEHFKTWE 281
+E+ +++ +R QE+ R E Q ++ ER ++ REQ+L + L+RE++ +
Sbjct: 343 QEERREQQLRREQEEERREQQLRREQEEERREQQLRREQQLRREQQLRREQQLRREQQLR 402
Query: 282 EQEDNFHLQQAKLRSKIR 299
++ QQ + ++R
Sbjct: 403 REQQLRREQQLRREQQLR 420
Score = 59.7 bits (143), Expect = 1e-08
Identities = 76/301 (25%), Positives = 125/301 (41%), Gaps = 41/301 (13%)
Query: 14 RRGRRRQSQSGS-RSRSRSHGRRNRRRREDEGRRRRRRRSRERRSDS-----EEERWQRS 67
R RRRQ Q R + + RE+ +RRR+ R R+ R D EE+
Sbjct: 918 REKRRRQEQERQYREEEQLQQEEEQLLREEREKRRRQERERQYRKDKKLQQKEEQLLGEE 977
Query: 68 GMRSRSPPRPKWHSRDGSSQSDSGEEQSRGQWARRRRRARSWSPSSSASSSASPGRSQSP 127
+ R R K + + Q EE+ + R +RR + W Q
Sbjct: 978 PEKRRRQEREKKYREEEELQQ---EEEQLLREEREKRRRQEWERQYRKKDELQQEEEQLL 1034
Query: 128 RAAAAALSQQQSLQER---LRLREERKQQEELMKAFETPEEKRARRLAKKEAKERKKREK 184
R +++ LQER R EE +Q+EE + EE+ RR + E + RK+ E
Sbjct: 1035 REER----EKRRLQERERQYREEEELQQEEEQLLG----EERETRRRQELERQYRKEEEL 1086
Query: 185 MGWGEEYMGYTNTDNPFGDNNLLGTFIWNKALEKKGISHLEEKELKE-RNKRIQEDNRLE 243
E+ + + + E++ + EE+ L+E R KR +++ LE
Sbjct: 1087 QQEEEQLLREEPEKRRRQERE-------RQCREEEELQQEEEQLLREEREKRRRQE--LE 1137
Query: 244 LQKVKQLRLEREREKAMRE-------QELEMLQREKEAEHFKTWEEQEDNFHLQQAKLRS 296
Q ++ +++E E+ +RE QELE RE+E + +E+E +Q K R
Sbjct: 1138 RQYREEEEVQQEEEQLLREEPEKRRRQELERQYREEE----ELQQEEEQLLREEQEKRRQ 1193
Query: 297 K 297
+
Sbjct: 1194 E 1194
Score = 57.4 bits (137), Expect = 5e-08
Identities = 106/481 (22%), Positives = 203/481 (42%), Gaps = 43/481 (8%)
Query: 14 RRGRRRQSQSGSRSRSRSHGRRNRRRREDEGRRRRRRRSRERRSDSEEERWQRSGMRSRS 73
R+ R R+ + + SR R+R+ RE+E ++ RR+ RER+ EE++ ++ R
Sbjct: 1409 RQDRDRKFREEEQQLSRQE--RDRKFREEE--QQVRRQERERKFLEEEQQLRQERHRKFR 1464
Query: 74 PPRPKWHSRDGSSQSDSGEEQSRG-----QWARRRRRARSWSPSSSASSSASPGRSQSPR 128
R+ Q +E+ R Q RR+ R R + S + +
Sbjct: 1465 EEEQLLQERE--EQQLHRQERDRKFLEEEQQLRRQERDRKFREQELRSQEPERKFLEEEQ 1522
Query: 129 AAAAALSQQQSLQERLRLR-EERKQQEELMKAFETPEEKRARRLAKKEAKERKKRE-KMG 186
Q++ LQE +LR +ER QQ + + EE++ R+ +++ R++R+ K
Sbjct: 1523 QLHRQQRQRKFLQEEQQLRRQERGQQRRQDRDRKFREEEQLRQEREEQQLSRQERDRKFR 1582
Query: 187 WGEEYMGYTNTDNPFGDNNLLGTFIWNKALEKKGISHLEEKELKERNKRIQEDNRLELQK 246
E+ + + F ++ + ++G L + ER+++ +ED +L ++
Sbjct: 1583 LEEQKVRRQEQERKFMEDE-------QQLRRQEGQQQLRQ----ERDRKFREDEQLLQER 1631
Query: 247 VKQL--RLEREREKAMREQELEMLQREKEAEHFKTWEEQEDNFHLQQA---KLRSKIRIR 301
+Q R ER+R+ E +L +RE++ H + + +E+ LQ+ +LR + R R
Sbjct: 1632 EEQQLHRQERDRKFLEEEPQLRRQEREQQLRHDRDRKFREEEQLLQEGEEQQLRRQERDR 1691
Query: 302 DGRAKPIDLL-----AKYISAEDDDLAVEMHEPYTFLNGLTVADMEDLLEDIQVYMELEQ 356
R + L K++ E E+ + L ++ L + Y ++ +
Sbjct: 1692 KFREEEQQLRRQERERKFLQEEQQLRRQELERKFREEEQLRQETEQEQLRRQERYRKILE 1751
Query: 357 GKNADFWRDMTTITEDEISKLRKLEASGKGPGERREGVNASVSSD-----VQSVFKGKTY 411
+ R+ + E + RK + ER E S SD + + + +
Sbjct: 1752 EEQLRPEREEQQLRRQE--RDRKFREEEQLRQEREEQQLRSQESDRKFREEEQLRQEREE 1809
Query: 412 NQLQVIFQGIEGKIRAGGPNLDMGYWESLLQQLRAHMARARLRERHQDVLRQKLYKLKQE 471
QL+ Q +GK R L + E L+Q R RA + Q+ R++ +L QE
Sbjct: 1810 QQLRP--QQRDGKYRWEEEQLQLEEQEQRLRQERDRQYRAEEQFATQEKSRREEQELWQE 1867
Query: 472 Q 472
+
Sbjct: 1868 E 1868
Score = 57.0 bits (136), Expect = 6e-08
Identities = 64/304 (21%), Positives = 124/304 (40%), Gaps = 15/304 (4%)
Query: 3 RDTRSRSRSAGRRGRRRQSQSGSRSRSRSHGRRNRRRREDEGRRRRRRRSRERRSDSEEE 62
R+ R + R R + R+ + + + G RR E R+ R+ E + EEE
Sbjct: 1035 REEREKRRLQERERQYREEEELQQEEEQLLGEERETRRRQE-LERQYRKEEELQ--QEEE 1091
Query: 63 RWQRSGMRSRSPPRPKWHSRDGSSQSDSGEEQSRGQWARRRRR--ARSWSPSSSASSSAS 120
+ R R + R+ E+ R + +RRR+ R +
Sbjct: 1092 QLLREEPEKRRRQERERQCREEEELQQEEEQLLREEREKRRRQELERQYREEEEVQQEEE 1151
Query: 121 PGRSQSPRAAAAALSQQQSLQERLRLREERKQQEE--LMKAFETPEEKRARRLAKKEAKE 178
+ P ++Q L+ + R EE +Q+EE L + E ++R R+ ++E +
Sbjct: 1152 QLLREEPEK-----RRRQELERQYREEEELQQEEEQLLREEQEKRRQERERQYREEEELQ 1206
Query: 179 RKKREKMGWGEEYMGYTNTD-NPFGDNNLLGTFIWNKALEKKGISHLEEKELKERNKRIQ 237
R+KR++ E+ P +N + ++ K E + LE+ +L++R +
Sbjct: 1207 RQKRKQRYRDEDQRSDLKWQWEPEKENAVRDNKVYCKGRENEQFRQLEDSQLRDRQSQQD 1266
Query: 238 EDNRLELQKVKQLRLERER--EKAMREQELEMLQREKEAEHFKTWEEQEDNFHLQQAKLR 295
+ L Q+ + ER R ++ E E L+RE++ E + + ++ L + +
Sbjct: 1267 LQHLLGEQQERDREQERRRWQQRDRHFPEEEQLEREEQKEAKRRDRKSQEEKQLLREERE 1326
Query: 296 SKIR 299
K R
Sbjct: 1327 EKRR 1330
Score = 56.6 bits (135), Expect = 8e-08
Identities = 116/544 (21%), Positives = 207/544 (38%), Gaps = 81/544 (14%)
Query: 2 GRDTRSRSRSAGRRGRRRQSQSG-------SRSRSRSHGRRNRRRR----------EDEG 44
GR+ + + R RQSQ + R R RR ++R E E
Sbjct: 1244 GRENEQFRQLEDSQLRDRQSQQDLQHLLGEQQERDREQERRRWQQRDRHFPEEEQLEREE 1303
Query: 45 RRRRRRRSRERRSDSEEERWQRSGMRSRSPPRPKWHSRDGSSQSDSGEEQSRGQWARRRR 104
++ +RR R+ + + + R +R R R K+ + Q + R + R+ R
Sbjct: 1304 QKEAKRRDRKSQEEKQLLREEREEKRRRQETDRKFREEEQLLQEREEQPLRRQERDRKFR 1363
Query: 105 RARSWSPSSSASSSASPGRSQSPRAAAAALSQQQSL-----QERLRLREERKQQEELMKA 159
R + L ++Q L +++LR +RK +EE +
Sbjct: 1364 EEELRHQEQGRKFLEEEQRLRRQERERKFLKEEQQLRCQEREQQLRQDRDRKFREEEQQL 1423
Query: 160 FETPEEKRARRLAKKEAKERKKREKMGWGEEYMGYTNTDNPFGDNNLLGTFIWNKALEKK 219
+++ R +++ R++RE+ EE F + L
Sbjct: 1424 SRQERDRKFRE--EEQQVRRQERERKFLEEEQQLRQERHRKFREEEQL------------ 1469
Query: 220 GISHLEEKELKERNKRIQEDNRLELQKVKQLRLEREREKAMREQELEMLQREK---EAEH 276
L+E+E E+ QE +R L++ +QLR +ER++ REQEL + E+ E E
Sbjct: 1470 ----LQERE--EQQLHRQERDRKFLEEEQQLR-RQERDRKFREQELRSQEPERKFLEEEQ 1522
Query: 277 FKTWEEQEDNFHLQQAKLRSKIR------IRDGRAKPIDLL-----AKYISAEDDDLAVE 325
++++ F ++ +LR + R RD + + + L + +S ++ D
Sbjct: 1523 QLHRQQRQRKFLQEEQQLRRQERGQQRRQDRDRKFREEEQLRQEREEQQLSRQERDRKFR 1582
Query: 326 MHEPYTFLNGLTVADMED--LLEDIQVYMELEQGKNADFWRDMTTITEDEISKLRKLEAS 383
+ E MED L + +L Q ++ F D + E E +L + E
Sbjct: 1583 LEEQKVRRQEQERKFMEDEQQLRRQEGQQQLRQERDRKFREDEQLLQEREEQQLHRQERD 1642
Query: 384 GK----GPGERREGVNASVSSDVQSVFKGKTYNQLQVIFQGIEGKIRAGGPNLDMGYWES 439
K P RR+ + D F+ + Q++ +G E ++R D + E
Sbjct: 1643 RKFLEEEPQLRRQEREQQLRHDRDRKFR----EEEQLLQEGEEQQLRR--QERDRKFREE 1696
Query: 440 LLQQLRAHMARARLRERHQDVLRQKL-----------YKLKQEQGVESEPLFPILKQEPQ 488
QQLR + + Q + RQ+L + +QEQ E IL++E
Sbjct: 1697 -EQQLRRQERERKFLQEEQQLRRQELERKFREEEQLRQETEQEQLRRQERYRKILEEEQL 1755
Query: 489 SPSR 492
P R
Sbjct: 1756 RPER 1759
Score = 51.2 bits (121), Expect = 3e-06
Identities = 66/314 (21%), Positives = 129/314 (41%), Gaps = 28/314 (8%)
Query: 3 RDTRSRSRSAGRRGRRRQSQSGSRSRSRSHGR------RNRRRREDEGRRRRR------R 50
R R + R+ + R+ + R G+ R+R+ REDE + R R
Sbjct: 1579 RKFRLEEQKVRRQEQERKFMEDEQQLRRQEGQQQLRQERDRKFREDEQLLQEREEQQLHR 1638
Query: 51 RSRERRSDSEEERWQRSGMRSRSPPRPKWHSRDGSSQSDSGEEQSRGQWARRRRRARSWS 110
+ R+R+ EE + +R + R+ GEEQ RR+ R R +
Sbjct: 1639 QERDRKFLEEEPQLRRQEREQQLRHDRDRKFREEEQLLQEGEEQQ----LRRQERDRKFR 1694
Query: 111 PSSSASSSASPGRS---QSPRAAAAALSQQQSLQERLRLREERKQQEELMKAFETPEEKR 167
R + + L ++ +E+LR E++Q + + EE++
Sbjct: 1695 EEEQQLRRQERERKFLQEEQQLRRQELERKFREEEQLRQETEQEQLRRQERYRKILEEEQ 1754
Query: 168 ARRLAKKEAKERKKREKMGWGEEYMGYTNTDNPFGDNNLLGTFIWNKALEKKGISHLEEK 227
R +++ R++R++ EE + + F + L ++ EE+
Sbjct: 1755 LRPEREEQQLRRQERDRKFREEEQLRQEREEQQLRSQESDRKFREEEQLRQER----EEQ 1810
Query: 228 ELKERN---KRIQEDNRLELQKVKQLRLEREREKAMREQELEMLQREKEAEHFKTWEEQE 284
+L+ + K E+ +L+L++ +Q RL +ER++ R +E Q + E + W+E+E
Sbjct: 1811 QLRPQQRDGKYRWEEEQLQLEEQEQ-RLRQERDRQYRAEEQFATQEKSRREEQELWQEEE 1869
Query: 285 DNFHLQ-QAKLRSK 297
+ + KLR +
Sbjct: 1870 QKRRQERERKLREE 1883
Score = 49.7 bits (117), Expect = 1e-05
Identities = 61/298 (20%), Positives = 121/298 (40%), Gaps = 26/298 (8%)
Query: 14 RRGRRRQSQSGSRSRSRSHGR-RNRRRREDEGRRRRRRRSRERRSDS-----EEERWQRS 67
R+ R + R + H + R+R+ E+E + RR+ R ++ R D EEE+ +
Sbjct: 1619 RKFREDEQLLQEREEQQLHRQERDRKFLEEEPQLRRQEREQQLRHDRDRKFREEEQLLQE 1678
Query: 68 GMRSRSPPRPKWHSRDGSSQSDSGEEQSRG-----QWARRRRRARSWSPSSSASSSASPG 122
G + + + Q +E+ R Q RR+ R +
Sbjct: 1679 GEEQQLRRQERDRKFREEEQQLRRQERERKFLQEEQQLRRQELERKFREEEQLRQETEQE 1738
Query: 123 RSQSPRAAAAALSQQQSLQERLRLREERKQQEELMKAFETPEEKRARRLAKKEAKERKKR 182
+ + L ++Q ER + R++++ + E ++R + + + +RK R
Sbjct: 1739 QLRRQERYRKILEEEQLRPEREEQQLRRQERDRKFREEEQLRQEREEQQLRSQESDRKFR 1798
Query: 183 EKMGWGEEYMGYTNTDNPFGDNNLLGTFIWNKALEKKGISHLEEKELKERNKRIQEDNRL 242
E EE + + G + W + + LEE+E + R +R R
Sbjct: 1799 E-----EEQLRQEREEQQLRPQQRDGKYRWEEEQLQ-----LEEQEQRLRQER-DRQYRA 1847
Query: 243 ELQKVKQLRLEREREKAMREQELEMLQ---REKEAEHFKTWEEQEDNFHLQQAKLRSK 297
E Q Q + RE ++ +E+E + Q R+ EH + +++E+ H Q +++S+
Sbjct: 1848 EEQFATQEKSRREEQELWQEEEQKRRQERERKLREEHIRR-QQKEEQRHRQVGEIKSQ 1904
Score = 47.0 bits (110), Expect = 7e-05
Identities = 53/247 (21%), Positives = 97/247 (39%), Gaps = 41/247 (16%)
Query: 60 EEERWQRSGMRSRSPPRPKWHSRDGSSQSDSGEEQSRGQWARRRRRARSWSPSSSASSSA 119
EE+R + G S R + + D E+ GQ R++R
Sbjct: 97 EEKRARCDGKESLLQDRRQEEDQRRFEPRDRQLEEEPGQRRRQKR--------------- 141
Query: 120 SPGRSQSPRAAAAALSQQQSLQERLRLREERKQQEELMKAFETPEEKRARRLAKKEAKER 179
Q A +Q QERL R+ +++ EEL + + +E+ RR +++ +
Sbjct: 142 -----QEQERELAEGEEQSEKQERLEQRDRQRRDEELWRQRQEWQEREERRAEEEQLQSC 196
Query: 180 KKREKMGWGEEYMGYTNTDNPFGDNNLLGTFIWNKALEKKGISHLEEKELKERNKRIQED 239
K E + +E LL L +KG +++ + +++ QE+
Sbjct: 197 KGHETEEFPDE--------EQLRRRELL-------ELRRKGREEKQQQRRERQDRVFQEE 241
Query: 240 NRLELQKVKQLRLEREREKAMREQELEMLQREKEAEHFKTWEEQE-----DNFHLQQAKL 294
E +K ++ L +E EK E+ + ++E E + E QE QQ +L
Sbjct: 242 EEKEWRK-RETVLRKEEEKLQEEEPQRQRELQEEEEQLRKLERQELRRERQEEEQQQQRL 300
Query: 295 RSKIRIR 301
R + ++R
Sbjct: 301 RREQQLR 307
>gi|239754909 PREDICTED: hypothetical protein [Homo sapiens]
Length = 245
Score = 75.5 bits (184), Expect = 2e-13
Identities = 70/268 (26%), Positives = 114/268 (42%), Gaps = 71/268 (26%)
Query: 20 QSQSGSRSR---SRSHGRRNRRRREDEGRRRRRRRSRERRSDSEEERWQRSGMRSRSPPR 76
QS+ R R +R G++ R + RR R +R RER + + ER ++ R
Sbjct: 35 QSEIREREREIETRKEGKKERESERKKERREREKRKREREKERKRERGKKEKKGERKKEE 94
Query: 77 PKWHSRDGSSQSDSGEEQSRGQWARRRRRARSWSPSSSASSSASPGRSQSPRAAAAALSQ 136
+ R ++ GEE+ + + ++ R R+ S+
Sbjct: 95 RERKKRRREKENKEGEEKEKRKKKEKKERGRT--------------------------SK 128
Query: 137 QQSLQERLRLREERKQQEELMKAFETPEEKRARRLAKKEAKERKKREKMGWGEEYMGYTN 196
+ +ER +EERK++E + E K+ R ++E KERKKRE+ GE
Sbjct: 129 EGKERER---KEERKREER-----KERERKKEEREKERERKERKKRERKQVGE------- 173
Query: 197 TDNPFGDNNLLGTFIWNKALEKKGISHLEEKELKERNKRIQEDNRLELQKVKQLRLERER 256
K E+K EKE KER KR E NR E +K ++ + RER
Sbjct: 174 -----------------KEEERK------EKERKERKKR--ERNRKERKKERERKERRER 208
Query: 257 EKAMREQELEMLQREKEAEHFKTWEEQE 284
+K +++E +R+K+ + W E+E
Sbjct: 209 KKERKKKEERKKERQKDRQ--TNWREKE 234
Score = 66.2 bits (160), Expect = 1e-10
Identities = 61/253 (24%), Positives = 111/253 (43%), Gaps = 47/253 (18%)
Query: 22 QSGSRSRSRSHGRRNRRRREDEGRRRRRRRSRERRS-DSEEERWQRSGMRSRSPPRPKWH 80
QS R R R R ++E E R++ RR RE+R + E+ER + G + + R K
Sbjct: 35 QSEIREREREIETRKEGKKERESERKKERREREKRKREREKERKRERGKKEKKGERKK-- 92
Query: 81 SRDGSSQSDSGEEQSRGQWARRRRRARSWSPSSSASSSASPGRSQSPRAAAAALSQQQSL 140
EE+ R ++RRR + + R + + S++
Sbjct: 93 -----------EERER----KKRRREKE-----NKEGEEKEKRKKKEKKERGRTSKEGKE 132
Query: 141 QERLRLREERKQQEELMKAFETPEEKRARRLAKKEAKERKKREKMGWGEEYMGYTNTDNP 200
+ER +EERK++E + E K+ R ++E KERKKRE+ GE+ +
Sbjct: 133 RER---KEERKREERKER-----ERKKEEREKERERKERKKRERKQVGEKEEERKEKERK 184
Query: 201 FGDNNLLGTFIWNKALEKKGISHLEEKELKERNKRIQEDNRLELQKVKQLRLEREREKAM 260
E+K ++ KER ++ + + + E +K ++ + ER++++
Sbjct: 185 ----------------ERKKRERNRKERKKERERKERRERKKERKKKEERKKERQKDRQT 228
Query: 261 REQELEMLQREKE 273
+E E +RE++
Sbjct: 229 NWREKERGKRERK 241
Score = 66.2 bits (160), Expect = 1e-10
Identities = 40/197 (20%), Positives = 86/197 (43%), Gaps = 16/197 (8%)
Query: 2 GRDTRSRSRSAGRRGRRRQSQSGSRSRSRSHGRRNRR--RREDEGRRRRRRRSRERRSDS 59
G+ R R RR R ++ + + R R G++ ++ R+++E R++RRR +E +
Sbjct: 51 GKKERESERKKERREREKRKREREKERKRERGKKEKKGERKKEERERKKRRREKENKEGE 110
Query: 60 EEERWQRSGMRSRSPPRPKWHSRDGSSQSDSGEEQSRGQWARRRRRARSWSPSSSASSSA 119
E+E+ ++ + R G + + E + + + R R+ R
Sbjct: 111 EKEKRKKKEKKER-----------GRTSKEGKERERKEERKREERKERERKKEEREKERE 159
Query: 120 SPGRSQSPRAAAAALSQQQSLQERLRLREERKQQEELMKAFETPEEKRARRLAKKEAKER 179
R + R +++ +ER ++ + ++E K E E + ++ KK+ + +
Sbjct: 160 RKERKKRERKQVGEKEEERKEKERKERKKRERNRKERKKERERKERRERKKERKKKEERK 219
Query: 180 KKREK---MGWGEEYMG 193
K+R+K W E+ G
Sbjct: 220 KERQKDRQTNWREKERG 236
Score = 48.5 bits (114), Expect = 2e-05
Identities = 45/175 (25%), Positives = 81/175 (46%), Gaps = 16/175 (9%)
Query: 137 QQSLQERLR----LREERKQQEELMKAFETPEEKRARRLAKKEAKERKKREKMGWGEEYM 192
Q ++ER R +E +K++E K EKR R K+ +ER K+EK G ++
Sbjct: 35 QSEIREREREIETRKEGKKERESERKKERREREKRKREREKERKRERGKKEKKGERKKEE 94
Query: 193 GYTNTDNPFGDNNLLGTFIWNKALEKKGISHLEEKELKERNKRIQEDNRLELQKVKQLRL 252
+N K E+K ++KE KER + +E E ++ ++
Sbjct: 95 RERKKRRREKEN---------KEGEEK--EKRKKKEKKERGRTSKEGKERERKEERKREE 143
Query: 253 EREREKAMREQELEMLQRE-KEAEHFKTWEEQEDNFHLQQAKLRSKIRIRDGRAK 306
+ERE+ E+E E ++E K+ E + E++E+ ++ + + + R R R K
Sbjct: 144 RKERERKKEEREKERERKERKKRERKQVGEKEEERKEKERKERKKRERNRKERKK 198
Score = 42.7 bits (99), Expect = 0.001
Identities = 26/112 (23%), Positives = 49/112 (43%), Gaps = 9/112 (8%)
Query: 3 RDTRSRSRSAGRRGRRRQSQSGSRSRSRSHGRRNRRRR------EDEGRRRRRRRSRERR 56
R+ + + R+ R R+ + + R R ++ R++ E + + R+ R+ RER
Sbjct: 133 RERKEERKREERKERERKKEEREKERERKERKKRERKQVGEKEEERKEKERKERKKRERN 192
Query: 57 SDSEEERWQRSGMRSRSPPRPKWHSRDGSSQSD---SGEEQSRGQWARRRRR 105
++ +R R R R K R Q D + E+ RG+ R+ R+
Sbjct: 193 RKERKKERERKERRERKKERKKKEERKKERQKDRQTNWREKERGKRERKERK 244
>gi|4759100 splicing factor, arginine/serine-rich 11 [Homo sapiens]
Length = 484
Score = 75.1 bits (183), Expect = 2e-13
Identities = 82/275 (29%), Positives = 120/275 (43%), Gaps = 63/275 (22%)
Query: 3 RDTRSRSRSAGRRG------RRRQSQSGSRSRSRSHGRRN----RRRREDEGRRRRRRRS 52
R +RSRSRS RR RR +S+S RS S+S RR RRRR R RR RS
Sbjct: 247 RHSRSRSRSRRRRTPSSSRHRRSRSRSRRRSHSKSRSRRRSKSPRRRRSHSRERGRRSRS 306
Query: 53 RERRSDSEEERWQRSGMRSRSPPRPKWHSRDGSSQSDSGEEQSRGQWARRRRRARSW--S 110
+ D ++E + RS++P PK +S S+S S E RRRRR+RS S
Sbjct: 307 TSKTRDKKKE--DKEKKRSKTP--PKSYSTARRSRSASRE--------RRRRRSRSGTRS 354
Query: 111 PSSSASSSASPGRSQSPRAAAAALSQQQSLQERLRLREERKQQEELMKAFETPEEKRARR 170
P S RS SPR +++ +++ R R+ER++ K + E+ R R
Sbjct: 355 PKKPRSPKRKLSRSPSPRRHK---KEKKKDKDKERSRDERERSTSKKKKSKDKEKDRER- 410
Query: 171 LAKKEAKERKKREKMGWGEEYMGYTNTDNPFGDNNLLGTFIWNKALEKKGISHLEEKELK 230
K E+ + K+ + EE GY + EKE K
Sbjct: 411 --KSESDKDVKQVTRDYDEEEQGYDS-----------------------------EKEKK 439
Query: 231 ERNKRIQEDNRLELQKVKQLRLEREREKAMREQEL 265
E K I+ + K K+ +E+ ++RE ++
Sbjct: 440 EEKKPIETGS----PKTKECSVEKGTGDSLRESKV 470
Score = 51.6 bits (122), Expect = 3e-06
Identities = 60/250 (24%), Positives = 107/250 (42%), Gaps = 39/250 (15%)
Query: 58 DSEEERWQRSGMRSRSPPRPKWHSRDGSSQSDSGEEQSRGQWARRRRRARSWSPSSSASS 117
D +EE+ + S RSRS R R SS SR + +R R R RS S S S
Sbjct: 240 DKKEEKRRHSRSRSRSRRR-----RTPSS--------SRHRRSRSRSRRRSHSKSRSRRR 286
Query: 118 SASPGRSQSPRAAAAALSQQQSLQERLRLREERKQQEELMKAFETPEEKRARRLAKKEAK 177
S SP R +S S+ S + R+++K+ +E ++ P+ R ++ ++
Sbjct: 287 SKSPRRRRSHSRERGRRSRSTS-----KTRDKKKEDKEKKRSKTPPKSYSTARRSRSASR 341
Query: 178 ERKKREKMGWGEEYMGYTNTDNPFGDNNLLGTFIWNKALEKKGISHLEEKELKERNKRIQ 237
ER++R G + P L + +K E+K+ K++ +
Sbjct: 342 ERRRRRSRS------GTRSPKKPRSPKRKLSRSPSPRRHKK------EKKKDKDKERSRD 389
Query: 238 EDNRLELQKVKQLRLERERE-KAMREQELEMLQREKEAEHFKTWEEQEDNFHLQQAKLRS 296
E R +K K E++RE K+ +++++ + R+ ++E+E + ++ K
Sbjct: 390 ERERSTSKKKKSKDKEKDRERKSESDKDVKQVTRD--------YDEEEQGYDSEKEKKEE 441
Query: 297 KIRIRDGRAK 306
K I G K
Sbjct: 442 KKPIETGSPK 451
>gi|239747134 PREDICTED: hypothetical protein XP_002343921 [Homo
sapiens]
Length = 600
Score = 74.7 bits (182), Expect = 3e-13
Identities = 78/329 (23%), Positives = 136/329 (41%), Gaps = 44/329 (13%)
Query: 4 DTRSRSRSAGRRGRRRQSQSGSRSRSRSHGRRNRRRREDEGRRRRRRRSRERRSDSEEER 63
D R R+R R RRR+ + R R +R RRR +D R+R R R R+R + E ER
Sbjct: 52 DDRERNRQKERE-RRREKRQTERETDR---KRERRREKDRHRKRDRHRERQRDREKERER 107
Query: 64 W---QRSGMRSRSPPRPKWHSRDGSSQSDSG-EEQSRGQWARRRRRARSWSPSSSASSSA 119
+R R + R K R+ + + G + Q+ GQ R R+R
Sbjct: 108 QTDRERDRQREKERNRQKERERETEREGERGRDRQTDGQRERERQRDAEKERERQTDRER 167
Query: 120 SPGRSQSPRAAAAALSQQQSLQERLRLRE------------------ERKQQEELMKAFE 161
++ + +Q +ER R RE ER+ + E + +
Sbjct: 168 QRQTERNRQKEREREKNRQERRERERQREKENKTEDRHSERGRERERERETETETERKRQ 227
Query: 162 TPEEKRARRLAKKEAKERKKREKMGWGEEYMGYTNTDNPFGDNNLLGTFIWNKALEKKGI 221
T E+ +R ++E +++ +RE+ E D + +
Sbjct: 228 TDRERDRQRKTEREREKQAERERASERETERDKERERERDRDRD-----------RDRRQ 276
Query: 222 SHLEEKELKERNKRIQEDNRLELQKVKQLRLERERE---KAMREQELEMLQREKEAEHFK 278
E + ++R +R + D E ++ +Q ERERE K RE+E E +RE++ E +
Sbjct: 277 KERERQTDRKRQRRTERDRETERKRERQRERERERERNRKRERERERER-ERERQRETER 335
Query: 279 TWEEQEDNFHLQQAKL---RSKIRIRDGR 304
E++ + +Q ++ R++ R+GR
Sbjct: 336 DREKERERKRKRQTEMDRERNRQTGREGR 364
Score = 69.7 bits (169), Expect = 9e-12
Identities = 69/307 (22%), Positives = 129/307 (42%), Gaps = 29/307 (9%)
Query: 2 GRDTRS---RSRSAGRRGRRRQSQSGSRSRSRSHGRRNRRRREDEGRRRRRRRSRERRSD 58
GRD ++ R R R + + + R R R R ++ RE E + R+ RR RER+ +
Sbjct: 138 GRDRQTDGQRERERQRDAEKERERQTDRERQRQTERNRQKERERE-KNRQERRERERQRE 196
Query: 59 SEEERWQRSGMRSRSPPRPKWHSRDGSSQSDSGEEQSRGQWARRRRRARSWSPSSSASSS 118
E + R R R R + + + + E+ R + R R ++ +S +
Sbjct: 197 KENKTEDRHSERGRERERERETETETERKRQTDRERDRQRKTEREREKQAERERASERET 256
Query: 119 ASPGRSQSPRAAAAALSQQQSLQERLRLREERKQQEELMKAFETPEEKRARRLAKKEAKE 178
+ R ++Q +ER + +RK+Q + ET ++ +R ++E +
Sbjct: 257 ERDKERERERDRDRDRDRRQKERER---QTDRKRQRRTERDRETERKRERQRERERERER 313
Query: 179 RKKREKMGWGE---EYMGYTNTDNPFGDNNLLGTFIWNKALEKKGISHLEEKELKERNKR 235
+KRE+ E E T D K E+K E +ERN++
Sbjct: 314 NRKRERERERERERERQRETERDR-------------EKERERKRKRQTEMD--RERNRQ 358
Query: 236 IQEDNRLELQKVKQLRLEREREKAMREQELEM---LQREKEAEHFKTWEEQEDNFHLQQA 292
+ R + ++ ++ ER+R+ A +E E R+KE E +T ++++ ++
Sbjct: 359 TGREGRRQAERERERERERDRQSAREREERERDRDRDRQKERER-QTEKDRDGQRETEKQ 417
Query: 293 KLRSKIR 299
+ R K R
Sbjct: 418 REREKDR 424
Score = 63.2 bits (152), Expect = 9e-10
Identities = 65/300 (21%), Positives = 115/300 (38%), Gaps = 19/300 (6%)
Query: 6 RSRSRSAGRRGRRRQSQSGSRSRSRSHGRRNRRRREDEGRRRRRRRSRERRSDSEEERW- 64
R R R+ R + ++ R R R + ED R R R RER +++E ER
Sbjct: 167 RQRQTERNRQKEREREKNRQERRERERQREKENKTEDRHSERGRERERERETETETERKR 226
Query: 65 --------QRSGMRSRSPPRPKWHSRDGSSQSDSGEEQSRGQWARRRRRARSWSPSSSAS 116
QR R R + + + ++ D E+ R + R RR + +
Sbjct: 227 QTDRERDRQRKTEREREKQAERERASERETERDKERERERDRDRDRDRRQKERERQTDRK 286
Query: 117 SSASPGRSQSPRAAAAALSQQQSLQERLRLRE---ERKQQEELMKAFETPEEKRARRLAK 173
R + +++ +ER R RE ER+++ E + E EK R K
Sbjct: 287 RQRRTERDRETERKRERQRERERERERNRKRERERERERERERQRETERDREKERERKRK 346
Query: 174 KEAKERKKREKMGWGEEYMGYTNTDNPFGDNNLLGTFIWNKALEKKGISHLEEKELKERN 233
++ + ++R + E G + + E++ + ++ +ER
Sbjct: 347 RQTEMDRERNRQTGRE---GRRQAERERERERERDRQSAREREERERDRDRDRQKERERQ 403
Query: 234 KRIQEDNRLELQKVKQLRLEREREKAMREQELEMLQREKEAEHFKTWEEQEDNFHLQQAK 293
D + E +K ++ +RE E+ RE+ E REK+ + E Q D +Q K
Sbjct: 404 TEKDRDGQRETEKQREREKDRESERG-RERGRE---REKQKGRERDRERQTDRQAGRQRK 459
Score = 59.3 bits (142), Expect = 1e-08
Identities = 49/219 (22%), Positives = 89/219 (40%), Gaps = 13/219 (5%)
Query: 8 RSRSAGRRGRRRQSQSGSRSRSRSHGRRNRRRREDEGRRRRRRRSRERRSDSEEERW-QR 66
R R++ R R + + R R R RR + R R+R+RR R+R ++ + ER +R
Sbjct: 248 RERASERETERDKERERERDRDRDRDRRQKERERQTDRKRQRRTERDRETERKRERQRER 307
Query: 67 SGMRSRSPPRPKWHSRDGSSQSDSGEEQSRGQWARRRRRARSWSPSSSASSSASPGRSQS 126
R R+ R + R+ + E+ R + R+R+ ++ + GR Q+
Sbjct: 308 ERERERNRKRERERERERERERQRETERDREKERERKRKRQTEMDRERNRQTGREGRRQA 367
Query: 127 PRA----------AAAALSQQQSLQERLRLREERKQQEELMKAFETPEEKRARRLAK--K 174
R +A +++ ++R R +E +Q E+ E++R R + +
Sbjct: 368 ERERERERERDRQSAREREERERDRDRDRQKERERQTEKDRDGQRETEKQREREKDRESE 427
Query: 175 EAKERKKREKMGWGEEYMGYTNTDNPFGDNNLLGTFIWN 213
+ER + + G E TD G T N
Sbjct: 428 RGRERGREREKQKGRERDRERQTDRQAGRQRKRSTLYVN 466
Score = 52.0 bits (123), Expect = 2e-06
Identities = 51/223 (22%), Positives = 86/223 (38%), Gaps = 29/223 (13%)
Query: 3 RDTRSRSRSAGRRGRRRQSQSGSRSRSRSHGRRNRRRREDEGRRRRRRRSRERRSDSEEE 62
R+T R R+RQ++ R R+R GR RR+ E R R R R R+R+S E E
Sbjct: 331 RETERDREKERERKRKRQTEM-DRERNRQTGREGRRQAE---RERERERERDRQSARERE 386
Query: 63 RWQRSGMRSRSPPRPKWHSRDGSSQSDSGEEQSR---------GQWARRRRRARSWSPSS 113
+R R R R + +D Q ++ +++ R + R R + +
Sbjct: 387 ERERDRDRDRQKERERQTEKDRDGQRETEKQREREKDRESERGRERGREREKQKGRERDR 446
Query: 114 SASSSASPGRSQS---------PRAAAAALSQQQSLQERLRLREERKQQEELMKAFETPE 164
+ GR + PR A + + Q + +R + ++ + P
Sbjct: 447 ERQTDRQAGRQRKRSTLYVNPPPRTARSGVVQSDPNRPTRGIRWKSSPEDPKAASTRFPW 506
Query: 165 EKRARRLAKKEAKERK-------KREKMGWGEEYMGYTNTDNP 200
+ A+ + A R+ KR + G G G T+NP
Sbjct: 507 GRPAKASRGRVAGRRRWEPRLGEKRGQGGEGRRPSGGFGTENP 549
Score = 47.8 bits (112), Expect = 4e-05
Identities = 58/288 (20%), Positives = 105/288 (36%), Gaps = 42/288 (14%)
Query: 38 RRREDEGRRRRRRRSRE-------------RRSDSEEERWQRSGMRSRSPPRPKWHSRDG 84
RRR RRR + R+ + E R +R R R + +D
Sbjct: 28 RRRPGSQESPRRRGLGQAHKDADGDDRERNRQKERERRREKRQTERETDRKRERRREKDR 87
Query: 85 SSQSDSGEEQSRGQWARRRR---RARSWSPSSSASSSASPGRSQSPRAAAAALSQQQSLQ 141
+ D E+ R + R R R R + R Q +
Sbjct: 88 HRKRDRHRERQRDREKERERQTDRERDRQREKERNRQKERERETEREGERGRDRQTDGQR 147
Query: 142 ERLRLRE---ERKQQEELMKAFETPEEKRARRLAKKEAKERKKREKMGWGEEYMGYTNTD 198
ER R R+ ER++Q + + +T ++ R +K +ER++RE+ +
Sbjct: 148 ERERQRDAEKERERQTDRERQRQTERNRQKEREREKNRQERRERERQ---------REKE 198
Query: 199 NPFGDNNLLGTFIWNKALEKKGISHLEEKELKERNKRIQEDNRLELQKVKQLRLEREREK 258
N D + ++G E+E + +R ++ +R ++ +Q + EREREK
Sbjct: 199 NKTEDRH-----------SERGRERERERETETETERKRQTDR---ERDRQRKTEREREK 244
Query: 259 AMREQELEMLQREKEAEHFKTWEEQEDNFHLQQAKLRSKIRIRDGRAK 306
+ + E++ E + + D Q+ + R R R R +
Sbjct: 245 QAERERASERETERDKERERERDRDRDRDRRQKERERQTDRKRQRRTE 292
Score = 42.7 bits (99), Expect = 0.001
Identities = 41/186 (22%), Positives = 75/186 (40%), Gaps = 11/186 (5%)
Query: 117 SSASPGRSQSPRAAAAALSQQQS---LQERLRLREERKQQEELMKAFETPEEKRARRLAK 173
S PG +SPR + + + +ER R +E +++E+ ET + KR RR K
Sbjct: 27 SRRRPGSQESPRRRGLGQAHKDADGDDRERNRQKERERRREKRQTERET-DRKRERRREK 85
Query: 174 KEAKERKKREKMGWGEEYMGYTNTDNPFGDNNLLGTFIWNKALEKKGISHLEEKELKERN 233
++R + + E TD K ++ E + ER
Sbjct: 86 DRHRKRDRHRERQRDREKERERQTDRERDRQR-------EKERNRQKERERETEREGERG 138
Query: 234 KRIQEDNRLELQKVKQLRLEREREKAMREQELEMLQREKEAEHFKTWEEQEDNFHLQQAK 293
+ Q D + E ++ + ERER+ Q R+KE E K +E+ + ++ +
Sbjct: 139 RDRQTDGQRERERQRDAEKERERQTDRERQRQTERNRQKEREREKNRQERRERERQREKE 198
Query: 294 LRSKIR 299
+++ R
Sbjct: 199 NKTEDR 204
>gi|116008442 zinc finger CCCH-type containing 13 [Homo sapiens]
Length = 1564
Score = 73.9 bits (180), Expect = 5e-13
Identities = 82/334 (24%), Positives = 134/334 (40%), Gaps = 61/334 (18%)
Query: 2 GRDTRSR-------SRSAGRRGRRRQS-----QSGSRSRSRSHGRRNR----RRREDEGR 45
GRDT + SRS GR R +S ++ SR+ SRS R +R R R E
Sbjct: 512 GRDTHRKEDTYPEESRSYGRNHLREESSRTEIRNESRNESRSEIRNDRMGRSRGRVPELP 571
Query: 46 RRRRRRSRERRSDSE------EERWQRSGMRSRSPPRPKWHSRDGSSQS-DSGEEQSRGQ 98
+ R SR + DS + W+ RS P R ++ RD Q+ DS E+ G+
Sbjct: 572 EKGSRGSRGSQIDSHSSNSNYHDSWE---TRSSYPERDRYPERDNRDQARDSSFERRHGE 628
Query: 99 WARRRRRARSWSPSSSASSSA------SPGRSQSPRAAAAALSQQQSLQERLRLREERKQ 152
RR R R PSS R + R + + +ER R RE ++
Sbjct: 629 RDRRDNRERDQRPSSPIRHQGRNDELERDERREERRVDRVDDRRDERARERDRERERDRE 688
Query: 153 QEELMKAFETPEEKRARRLAKKEAKERKKREKMGWGEEYMGYTNTDNPFGDNNLLGTFIW 212
+E + E ++ R L ++ A+ER++ + E
Sbjct: 689 RERERERERDREREKERELERERAREREREREKERDRE---------------------- 726
Query: 213 NKALEKKGISHLEEKELKERNKRIQEDNRLELQKVKQLRLEREREKAMREQELEMLQREK 272
+ H E+E + R +E R ++ ++ ERERE+ + +R+K
Sbjct: 727 ----RDRDRDHDRERERERERDREKEREREREERERERERERERERERERERERARERDK 782
Query: 273 EAEHFKTWEEQE---DNFHLQQAKLRSKIRIRDG 303
E E + WE+++ D+ ++ ++R RDG
Sbjct: 783 ERERQRDWEDKDKGRDDRREKREEIREDRNPRDG 816
Score = 59.3 bits (142), Expect = 1e-08
Identities = 79/357 (22%), Positives = 138/357 (38%), Gaps = 49/357 (13%)
Query: 3 RDTRSRS--RSAGR-----RGRRRQSQSGSRSRSRSHGRRNRRRREDEGRR-RRRRRSRE 54
RD R S R GR R RR+ + R R R R RE E R R R R RE
Sbjct: 637 RDQRPSSPIRHQGRNDELERDERREERRVDRVDDRRDERARERDRERERDRERERERERE 696
Query: 55 RRSDSEEER-----------WQRSGMRSRSPPRPKWHSRDGSSQSDSGEEQSRGQWARRR 103
R + E+ER +R R R R + H R+ + + E+ R + R
Sbjct: 697 RDREREKERELERERAREREREREKERDRERDRDRDHDRERERERERDREKEREREREER 756
Query: 104 RRARSWSPSSSASSSASPGRSQSPRAAAAALSQQQSLQERLRLREERKQQEELMKAFETP 163
R R R+ R +Q+ +++ + R++R+++ E ++ P
Sbjct: 757 ERERERERERERERERERERA---RERDKERERQRDWEDKDKGRDDRREKREEIREDRNP 813
Query: 164 EEKRARRLAKKE-------AKERKKREKMGWGEEYMGYTNTDNPFGDNNLLGTFIWNKAL 216
+ R +KK + + + + + Y + D+ + LL + +
Sbjct: 814 RDGHDERKSKKRYRNEGSPSPRQSPKRRREHSPDSDAYNSGDDKNEKHRLLSQVVRPQES 873
Query: 217 EKKGISHLEE------KELKERNKRIQEDNRLELQKVKQ--LRLEREREKAMREQELEML 268
SHL E KE + +R + R E Q++K+ ++++RE+ + M
Sbjct: 874 RSLSPSHLTEDRQGRWKEEDRKPERKESSRRYEEQELKEKVSSVDKQREQTEILESSRMR 933
Query: 269 QREKEAEHFKTWEEQEDNFHLQQAKLRSKIRIRDGRAKPIDLLAKYISAEDDDLAVE 325
++ H E D H + K ++KI + KPI ++DD+ +E
Sbjct: 934 AQDIIGHHQSEDRETSDRAH-DENKKKAKI-----QKKPIK------KKKEDDVGIE 978
Score = 57.4 bits (137), Expect = 5e-08
Identities = 63/310 (20%), Positives = 122/310 (39%), Gaps = 24/310 (7%)
Query: 6 RSRSRSAGRRGRRRQSQSGSRSRSRSHGRRNRRRREDEGRRRRRRRSRERRSDSEEERWQ 65
R R + R R + R R R R R RE E R R R R RER + E ER +
Sbjct: 717 REREKERDRERDRDRDHDRERERERERDREKEREREREERERERERERERERERERER-E 775
Query: 66 RSGMRSRSPPRPK-WHSRD-GSSQSDSGEEQSR-------GQWARRRRRARSWSPSSSAS 116
R+ R + R + W +D G E+ R G R+ ++ S S
Sbjct: 776 RARERDKERERQRDWEDKDKGRDDRREKREEIREDRNPRDGHDERKSKKRYRNEGSPSPR 835
Query: 117 SSASPGRSQSPRAAAAALSQQQSLQERLRLREERKQQEELMKAFETPEEKRARRLAKKEA 176
S R SP + A ++ + RL + R Q+ + E+++ R +
Sbjct: 836 QSPKRRREHSPDSDAYNSGDDKNEKHRLLSQVVRPQESRSLSPSHLTEDRQGRWKEEDRK 895
Query: 177 KERKKREKMGWGEEYMGYTNTDNPFGDNNLLGTFIWNKALEKKGISHLEEKELKERNKRI 236
ERK+ + +E ++ + + + + + + I + E +E + R
Sbjct: 896 PERKESSRRYEEQELKEKVSSVDKQREQT---EILESSRMRAQDIIGHHQSEDRETSDRA 952
Query: 237 QEDNRLELQKVKQLRLEREREKAMREQELEMLQREKEAEHFKTWEEQEDNFHLQQAKLRS 296
++N+ K+ +++++ K +E ++ + E + +T E F ++ + +
Sbjct: 953 HDENK------KKAKIQKKPIKKKKEDDVGI-----ERGNIETTSEDGQVFSPKKGQKKK 1001
Query: 297 KIRIRDGRAK 306
I + ++K
Sbjct: 1002 SIEKKRKKSK 1011
Score = 56.2 bits (134), Expect = 1e-07
Identities = 70/334 (20%), Positives = 127/334 (38%), Gaps = 65/334 (19%)
Query: 3 RDTRSRSRSAGRRGRRRQSQSGSRSRSRSHGRRNRRRREDEGRRRRRRRSRERRSDSEEE 62
R+ R R R R + + R R+R + R+R+ E + + R RE+R + E+
Sbjct: 751 REREERERERERERERERERERERERARERDKERERQRDWEDKDKGRDDRREKREEIRED 810
Query: 63 RWQRSGMRSR----------------SPPRPKWHSRDG---SSQSDSGEEQSRGQWARRR 103
R R G R SP R + HS D +S D E+ R
Sbjct: 811 RNPRDGHDERKSKKRYRNEGSPSPRQSPKRRREHSPDSDAYNSGDDKNEKHRLLSQVVRP 870
Query: 104 RRARSWSPSSSASSSASPGRSQS---PRAAAAALSQQQSLQERLRLREERKQQEELMKAF 160
+ +RS SPS + + R ++ ++Q L+E++ +++++Q E++++
Sbjct: 871 QESRSLSPSHLTEDRQGRWKEEDRKPERKESSRRYEEQELKEKVSSVDKQREQTEILESS 930
Query: 161 ET---------------------PEEKRARRLAKKEAKERKKREKMGWGEEYMGYTNTDN 199
E K+ ++ KK K +KK + +G + T+ D
Sbjct: 931 RMRAQDIIGHHQSEDRETSDRAHDENKKKAKIQKKPIK-KKKEDDVGIERGNIETTSEDG 989
Query: 200 PFGDNNLLGTFIWNKALEKKGISHLEEKELKERNKRIQEDNRLELQKVKQLRLEREREKA 259
F K +KK I EK+ K+ + Q+ K+ R R
Sbjct: 990 Q--------VFSPKKGQKKKSI----EKKRKKSKGDSDISDEEAAQQSKKKRGPRTPPIT 1037
Query: 260 MREQELEML---------QREKEAEHFKTWEEQE 284
+E+ +EM ++KE F W +++
Sbjct: 1038 TKEELVEMCNGKNGILEDSQKKEDTAFSDWSDED 1071
Score = 52.8 bits (125), Expect = 1e-06
Identities = 79/321 (24%), Positives = 126/321 (39%), Gaps = 41/321 (12%)
Query: 4 DTRS-RSRSAGRRGRRRQSQSGSRSRSRSHGR-----RNRRRREDEGRRRRRRRSRERRS 57
DTR R R R R Q S SR R R+RR D RR R SR+ R
Sbjct: 419 DTRGKRDREKDSREEREYEQDQSSSRDHRDDREPRDGRDRRDARDTRDRRELRDSRDMRD 478
Query: 58 DSEEERWQRSGMRSRSPPRPKWHSRDGSSQSDSGEEQSRGQWARRRRRARSWSPSSSASS 117
E + R SR P RD S D+ + + R R R P S S
Sbjct: 479 SREMRDYSRDTKESRDP-------RDSRSTRDAHDYRDRE--GRDTHRKEDTYPEESRSY 529
Query: 118 SASPGRSQSPRAAAAALSQQQSLQERLRLREERKQQEELMKAFETPEE-KRARRLAKKEA 176
+ R +S R S+ +S R +R +R + + E PE+ R R ++ ++
Sbjct: 530 GRNHLREESSRTEIRNESRNES---RSEIRNDRMGRSR-GRVPELPEKGSRGSRGSQIDS 585
Query: 177 KERKKREKMGWGEEYMGYTNTDN-PFGDNNLLGTFIWNKALEKKGISHLEEKELKERNKR 235
W E Y D P DN + + E++ + ++ +ER++R
Sbjct: 586 HSSNSNYHDSW-ETRSSYPERDRYPERDNRDQAR---DSSFERRH-GERDRRDNRERDQR 640
Query: 236 -------------IQEDNRLELQKVKQLRLEREREKAMREQELEM-LQREKEAEHFKTWE 281
++ D R E ++V ++ R+ R++E E +RE+E E +
Sbjct: 641 PSSPIRHQGRNDELERDERREERRVDRVDDRRDERARERDRERERDRERERERERERD-R 699
Query: 282 EQEDNFHLQQAKLRSKIRIRD 302
E+E L++ + R + R R+
Sbjct: 700 EREKERELERERARERERERE 720
Score = 42.0 bits (97), Expect = 0.002
Identities = 58/267 (21%), Positives = 96/267 (35%), Gaps = 56/267 (20%)
Query: 26 RSRSRSHGRRNRRRREDEGRRRRRRRSRERRSDSEEERWQR---SGMRSRSPPRPKWHSR 82
+ RS S G R GR R RS ++ +R SG R R +
Sbjct: 1186 QKRSSSLGSNRSNRSHTSGRLRSPSNDSAHRSGDDQSGRKRVLHSGSRDREKTK------ 1239
Query: 83 DGSSQSDSGEEQSRGQWARRRRRARSWSPS-----SSASSSASPGRSQSPRAAAAALSQQ 137
S +GE +SR +R +RS S S +S +SP + + + + +
Sbjct: 1240 ---SLEITGERKSRIDQLKRGEPSRSTSSDRQDSRSHSSRRSSPESDRQVHSRSGSFDSR 1296
Query: 138 QSLQERLRLREERKQQEELMKAFET----------PEEKRARRLAKKEA-KERKKREKMG 186
LQER R +R+++ E + P + RL ++E +ER KR +
Sbjct: 1297 DRLQERDRYEHDRERERERRDTRQREWDRDADKDWPRNRDRDRLRERERERERDKRRDLD 1356
Query: 187 WGEEYMGYTNTDNPFGDNNLLGTFIWNKALEKKGISHLEEKELKERNKRIQEDNRLELQK 246
E + IS E++ R E +++E K
Sbjct: 1357 RERERL----------------------------ISDSVERDRDRDRDRTFESSQIESVK 1388
Query: 247 VKQLRLEREREKAMREQELEMLQREKE 273
+ +LE E E+ + + L +KE
Sbjct: 1389 RCEAKLEGEHERDLESTSRDSLALDKE 1415
Score = 42.0 bits (97), Expect = 0.002
Identities = 47/184 (25%), Positives = 80/184 (43%), Gaps = 8/184 (4%)
Query: 3 RDTRSRS--RSAGRRGRRRQSQSGSRSRSRSHGRRNRRRREDEGRRRRRRRSRERRSDSE 60
+D+RS S RS+ R+ S+SGS SR + R D R R RR +R+R D +
Sbjct: 1268 QDSRSHSSRRSSPESDRQVHSRSGSFD-SRDRLQERDRYEHDRERERERRDTRQREWDRD 1326
Query: 61 EER-WQRSGMRSRSPPRPKWHSRDGSSQSDSGEEQSRGQWARRRRRARSWSPSSSASSSA 119
++ W R+ R R R + RD D E+ + R R R + +S
Sbjct: 1327 ADKDWPRNRDRDRLRERERERERDKRRDLDRERERLISD-SVERDRDRDRDRTFESSQIE 1385
Query: 120 SPGRSQSPRAAAAALSQQQSLQERLRLREERKQQE-ELMKAFETPEEKRARRLAKKEAKE 178
S R ++ + + ++ L L +ER ++ ++ FE E ++ R EA +
Sbjct: 1386 SVKRCEAKLEGEHERDLESTSRDSLALDKERMDKDLGSVQGFE--ETNKSERTESLEAGD 1443
Query: 179 RKKR 182
+ +
Sbjct: 1444 DESK 1447
Score = 40.4 bits (93), Expect = 0.006
Identities = 51/212 (24%), Positives = 83/212 (39%), Gaps = 44/212 (20%)
Query: 1 MGRDTRSRSRSAGR----------------RGRRRQSQSGSRSRSRSHGRRNRRRREDEG 44
+G + +RS ++GR GR+R SGSR R ++ + E G
Sbjct: 1192 LGSNRSNRSHTSGRLRSPSNDSAHRSGDDQSGRKRVLHSGSRDREKT------KSLEITG 1245
Query: 45 RRRRR----RRSRERRSDSEEERWQRSGMRSRSPPRP--KWHSRDGSSQS-------DSG 91
R+ R +R RS S + + RS RS P + HSR GS S D
Sbjct: 1246 ERKSRIDQLKRGEPSRSTSSDRQDSRSHSSRRSSPESDRQVHSRSGSFDSRDRLQERDRY 1305
Query: 92 EEQSRGQWARRRRRARSWSPSSSASSSASPGRSQSPRAAAAALSQQQSLQERLRLREERK 151
E + RR R R W + + R + L +++ +ER + R+ +
Sbjct: 1306 EHDRERERERRDTRQREWDRDADKDWPRNRDRDR--------LRERERERERDKRRDLDR 1357
Query: 152 QQEELMK-AFETPEEKRARRLAKKEAKERKKR 182
++E L+ + E ++ R + E KR
Sbjct: 1358 ERERLISDSVERDRDRDRDRTFESSQIESVKR 1389
Score = 38.1 bits (87), Expect = 0.031
Identities = 61/304 (20%), Positives = 112/304 (36%), Gaps = 39/304 (12%)
Query: 3 RDTRSRSRSAGRRG--------RRRQSQSGSRSRSRSHGRRNRRRREDEGRRRRRRRSRE 54
R+ R + RS G R S S S S + H RR+R +R
Sbjct: 308 REKRDKPRSTSPAGQHHSPISSRHHSSSSQSGSSIQRHSPSPRRKRTPSPSYQRTLTPPL 367
Query: 55 RRSDSEEERWQRSG-MRSRSPPRPK-------WHSRDGSSQS----DSGEEQSRGQWARR 102
RRS S S R +SPPR + H + +SQS E +RG+ R
Sbjct: 368 RRSASPYPSHSLSSPQRKQSPPRHRSPMREKGRHDHERTSQSHDRRHERREDTRGKRDRE 427
Query: 103 R--RRARSWSPSSSASSSASPGRSQ---SPRAAAAALSQQQSLQERLRLREERKQQEELM 157
+ R R + S+S R R A ++ L++ +R+ R+ ++
Sbjct: 428 KDSREEREYEQDQSSSRDHRDDREPRDGRDRRDARDTRDRRELRDSRDMRDSREMRDYSR 487
Query: 158 KAFETPEEKRARRLAKKEAKERKKREKMGWGEEYMGYTNTDNPFGDNNLLGTFIWNKALE 217
E+ + + +R + ++A + + RE + Y +G N+L E
Sbjct: 488 DTKESRDPRDSR--STRDAHDYRDREGRDTHRKEDTYPEESRSYGRNHL---------RE 536
Query: 218 KKGISHLEEKELKERNKRIQEDNRLELQKVKQLRLEREREKAMREQELEMLQREKEAEHF 277
+ + + + E I+ D R+ + + L + + R +++ + +
Sbjct: 537 ESSRTEIRNESRNESRSEIRND-RMGRSRGRVPELPEKGSRGSRGSQID--SHSSNSNYH 593
Query: 278 KTWE 281
+WE
Sbjct: 594 DSWE 597
Score = 30.8 bits (68), Expect = 4.9
Identities = 50/226 (22%), Positives = 82/226 (36%), Gaps = 27/226 (11%)
Query: 52 SRERRSDSEEERWQRSGMRSRSPPRPKWHSRDGSSQSDSGEEQSRGQWARRRR-----RA 106
S+ RR + E S SR RP R G S + E Q R W +
Sbjct: 2 SKIRRKVTVENTKTISDSTSR---RPSVFERLGPSTGSTAETQCRN-WLKTGNCLYGNTC 57
Query: 107 RSWSPSSSASSSASPGRSQSPRAAAAALSQQQSLQERLRLREERKQQEELMKAFETPEEK 166
R S S +SP L ++ + + E +K+ E + E
Sbjct: 58 RFVHGPSPRGKGYSSNYRRSPERPTGDLRERMKNKRQDVDTEPQKRNTEESSSPVRKESS 117
Query: 167 RARRLAKKEAKERKKREKMGWGEEYMGYTNTDNPFGDNNLLGTFIWNKALEKKGISHLEE 226
R R K++ K K+R E TN D+ DN + ++ E
Sbjct: 118 RGRHREKEDIKITKERTPESEEENVEWETNRDD--SDNGDI------------NYDYVHE 163
Query: 227 KELKERNKRIQEDNRLELQKVKQLRLEREREKAMREQELEMLQREK 272
L+ + ++IQ EL K++Q +E+ E ++++ + R K
Sbjct: 164 LSLEMKRQKIQR----ELMKLEQENMEKREEIIIKKEVSPEVVRSK 205
Score = 30.8 bits (68), Expect = 4.9
Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 12/88 (13%)
Query: 222 SHLEEKELKERNKRIQE-----DNRLELQKVKQLRLEREREKAMREQELEMLQREKEAEH 276
SH + E ++++ D+R LQ+ + +RERE+ R+ QRE + +
Sbjct: 1272 SHSSRRSSPESDRQVHSRSGSFDSRDRLQERDRYEHDRERERERRDTR----QREWDRDA 1327
Query: 277 FKTWEEQEDNFHLQQAKLRSKIRIRDGR 304
K W D L++ R + R RD R
Sbjct: 1328 DKDWPRNRDRDRLRE---RERERERDKR 1352
>gi|41327773 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Homo
sapiens]
Length = 1031
Score = 72.0 bits (175), Expect = 2e-12
Identities = 61/188 (32%), Positives = 88/188 (46%), Gaps = 30/188 (15%)
Query: 2 GRDTRSRSRSAGRRGRRRQSQSGSRSRSRSHGR--RNRRRREDEGRRRRRRRSRERRSDS 59
G D RSRSR RR R +S+ RSRSR R R+R R D R RRR RSR+RR
Sbjct: 35 GDDRRSRSRDRDRRRERSRSRDKRRSRSRDRKRLRRSRSRERDRSRERRRSRSRDRRRSR 94
Query: 60 EEERWQRSGMRSRSPPRPKWHSRDGSSQSDSGEEQSRGQWARRRRRARSWSPSSSASSSA 119
R +RS RS SP S+ ++S S E+ G+ ++ +++ +
Sbjct: 95 SRSRGRRS--RSSSPGN---KSKKTENRSRSKEKTDGGESSKEKKKDKD----------- 138
Query: 120 SPGRSQSPRAAAAALSQQQSLQERLRLREERKQ---QEELMKAFETPEEKRARRLAKKEA 176
+ + A Q L+E +R R+ER + +E+ KA E E KKE
Sbjct: 139 ---DKEDEKEKDAGNFDQNKLEEEMRKRKERVEKWREEQRKKAMENIGE------LKKEI 189
Query: 177 KERKKREK 184
+E K+ +K
Sbjct: 190 EEMKQGKK 197
Score = 60.1 bits (144), Expect = 8e-09
Identities = 75/289 (25%), Positives = 118/289 (40%), Gaps = 88/289 (30%)
Query: 1 MGRDTRSRSRSAGRRGRRRQSQSGSRSRSRSHGRRNRRRREDEGRRRRRRRSRERRSDSE 60
MGR++R + + RGR SGSRSRSRS + +R +D RR R R R+RR +
Sbjct: 1 MGRESRHYRKRSASRGR-----SGSRSRSRSPSDKRSKRGDD---RRSRSRDRDRRRERS 52
Query: 61 EERWQRSGMRSRSPPRPKWHSRDGSSQSDSGEEQSRGQWARRRRRARSWSPSSSASSSAS 120
R +R RSRS R + R S + D E+ R + +R RRR+RS S S S+S
Sbjct: 53 RSRDKR---RSRSRDRKRLR-RSRSRERDRSRERRRSR-SRDRRRSRSRS-RGRRSRSSS 106
Query: 121 PGRSQSPRAAAAALSQQQSLQERLRLREERKQQEELMKAFETPEEKRARRLAKKEAKERK 180
PG + E R + +E E+ +EK+ + K++ KE+
Sbjct: 107 PGNKS-------------------KKTENRSRSKEKTDGGESSKEKKKDKDDKEDEKEKD 147
Query: 181 KREKMGWGEEYMGYTNTDNPFGDNNLLGTFIWNKALEKKGISHLEEKELKERNKRIQEDN 240
G F NK E+E+++R +R+
Sbjct: 148 A--------------------------GNFDQNKL----------EEEMRKRKERV---- 167
Query: 241 RLELQKVKQLRLEREREKAMREQELEMLQREKEAEHF---KTWEEQEDN 286
E+ RE+ ++ + + +KE E K W ++D+
Sbjct: 168 ------------EKWREEQRKKAMENIGELKKEIEEMKQGKKWSLEDDD 204
>gi|55741709 RNA binding motif protein 25 [Homo sapiens]
Length = 843
Score = 71.6 bits (174), Expect = 2e-12
Identities = 72/317 (22%), Positives = 120/317 (37%), Gaps = 30/317 (9%)
Query: 2 GRDTRSRSRSAGRRGRRRQSQSGSRSRSRSHGRRNRRRREDEGRRRRRRRSRERRSDSEE 61
G+ + R R R + + R R R R R ++ + R R R R+R D +
Sbjct: 296 GKKEKERQEIEKERRERERERERERERREREREREREREREKEKERERERERDRDRDRTK 355
Query: 62 ER-------WQRSGMRSRSPPRPKWHSRDGSSQSDSGEEQSRGQWARRRRRARSWSPSSS 114
ER R R RS R K SR D E+ R + R R R R
Sbjct: 356 ERDRDRDRERDRDRDRERSSDRNKDRSRSREKSRDRERERER-ERERERERERERERERE 414
Query: 115 ASSSASPGRSQSPRAAAAALSQQQSLQER----LRLREERKQQEELMKAFETPEEKRARR 170
R + ++ ER +LRE+ +E +K +E E K+ R
Sbjct: 415 REREREREREREKDKKRDREEDEEDAYERRKLERKLREKEAAYQERLKNWEIRERKKTRE 474
Query: 171 LAKKEAKERKKREKMGWGEEYMGYTNTDNPFGDNNLLGTFIWNKALEKKGISHLEEKELK 230
K+ +E ++R +M +E + D+ + AL+K+ +E E
Sbjct: 475 YEKEAEREEERRREM--AKEAKRLKEFLEDYDDDRDDPKYYRGSALQKRLRDREKEMEAD 532
Query: 231 ERNKRIQE----------------DNRLELQKVKQLRLEREREKAMREQELEMLQREKEA 274
ER+++ ++ D ELQ+++Q R + + +E E E + EK+
Sbjct: 533 ERDRKREKEELEEIRQRLLAEGHPDPDAELQRMEQEAERRRQPQIKQEPESEEEEEEKQE 592
Query: 275 EHFKTWEEQEDNFHLQQ 291
+ K E E+ +Q
Sbjct: 593 KEEKREEPMEEEEEPEQ 609
Score = 66.6 bits (161), Expect = 8e-11
Identities = 72/289 (24%), Positives = 120/289 (41%), Gaps = 28/289 (9%)
Query: 3 RDTRSRSRSAGRRGRRR-QSQSGSRSRSRSHGRRNRRRREDEGRRRRRRRSRERRSDSEE 61
RD SR S R ++ + + G + + R + RR RE E R R RR RER + E
Sbjct: 274 RDLISREISKFRDTHKKLEEEKGKKEKERQEIEKERRERERERERERERRERERERERER 333
Query: 62 ERWQRSGMRSRSPPRPKWHSRDGSSQSDSGEEQSRGQWARRRRRARSWSPSSSASSSASP 121
ER + + R R + RD + + D ++ R R R R RS + S S
Sbjct: 334 EREKE---KERERERERDRDRDRTKERDRDRDRERD---RDRDRERSSDRNKDRSRSREK 387
Query: 122 GRSQSPRAAAAALSQQQSLQERLRLRE---ERKQQEELMKAFETPEEKRARRLAKKEAKE 178
R + +++ +ER R RE ER+++ E K + E+ ++ E
Sbjct: 388 SRDREREREREREREREREREREREREREREREREREREKDKKRDREEDEEDAYERRKLE 447
Query: 179 RKKREKMGWGEEYMGYTNTDNPFGDNNLLGTFIWNKALEKKGISHLEEKELKERNKRIQE 238
RK REK Y + T + K E++ +E+ + KR++E
Sbjct: 448 RKLREKEA------AYQERLKNWEIRERKKTREYEKEAERE---EERRREMAKEAKRLKE 498
Query: 239 ------DNRLELQKVKQLRLE---REREKAMREQELEMLQREKEAEHFK 278
D+R + + + L+ R+REK M E + + ++E E +
Sbjct: 499 FLEDYDDDRDDPKYYRGSALQKRLRDREKEMEADERDRKREKEELEEIR 547
Score = 40.0 bits (92), Expect = 0.008
Identities = 45/229 (19%), Positives = 81/229 (35%), Gaps = 53/229 (23%)
Query: 5 TRSRSRSAGRRGRRRQSQSGSRSRSRSHGRRNRRRREDEGRRRRRRRSRERRSDSEEERW 64
+RSR +S R R + + R R R R R RE E R R + + R + EE+ +
Sbjct: 382 SRSREKSRDREREREREREREREREREREREREREREREREREREKDKKRDREEDEEDAY 441
Query: 65 QRSGMRSRSPPRP--------KWHSRDGSSQSD-----SGEEQSRGQWARRRRRARSWSP 111
+R + + + W R+ + EE+ R + A+ +R + +
Sbjct: 442 ERRKLERKLREKEAAYQERLKNWEIRERKKTREYEKEAEREEERRREMAKEAKRLKEFLE 501
Query: 112 S------------SSASSSASPGRSQSPRAAAAALSQQQSLQERLRLR------------ 147
SA R + A +++ E +R R
Sbjct: 502 DYDDDRDDPKYYRGSALQKRLRDREKEMEADERDRKREKEELEEIRQRLLAEGHPDPDAE 561
Query: 148 -------EERKQQEELMKAFETPEE---------KRARRLAKKEAKERK 180
ER++Q ++ + E+ EE KR + ++E E+K
Sbjct: 562 LQRMEQEAERRRQPQIKQEPESEEEEEEKQEKEEKREEPMEEEEEPEQK 610
Score = 39.7 bits (91), Expect = 0.010
Identities = 45/211 (21%), Positives = 86/211 (40%), Gaps = 30/211 (14%)
Query: 136 QQQSLQERLRLREERKQQEELMKAFETPEEKRARRLAKKEAKERKKREKMGWGEEYMGYT 195
++Q +++ R RE +++E + E E+ R +KE + ++R++ +
Sbjct: 301 ERQEIEKERRERERERERERERREREREREREREREKEKERERERERDRDRDRTKERDRD 360
Query: 196 NTDNPFGDNNLLGTFIWNKALEKKGISHLEEKELKERNKRIQEDNRLELQKVKQLRLERE 255
D + + NK + E+ +ER + + + E ++ ++ ERE
Sbjct: 361 RDRERDRDRDRERSSDRNKDRSRSR----EKSRDRERERERERERERERERERERERERE 416
Query: 256 REK--------------------AMREQELEMLQREKEA---EHFKTWE--EQEDNFHLQ 290
RE+ A ++LE REKEA E K WE E++ +
Sbjct: 417 REREREREREKDKKRDREEDEEDAYERRKLERKLREKEAAYQERLKNWEIRERKKTREYE 476
Query: 291 QAKLRSKIRIRDGRAKPIDLLAKYISAEDDD 321
+ R + R R+ AK L +++ DDD
Sbjct: 477 KEAEREEERRRE-MAKEAKRLKEFLEDYDDD 506
Score = 37.7 bits (86), Expect = 0.040
Identities = 28/92 (30%), Positives = 51/92 (55%), Gaps = 9/92 (9%)
Query: 217 EKKGISHLEEKELKERNKRIQEDN---RLELQKVKQLRLEREREKAMREQELEMLQREKE 273
+K+ + E + ++ +K+++E+ E Q++++ R ERERE RE+E E +RE+E
Sbjct: 272 DKRDLISREISKFRDTHKKLEEEKGKKEKERQEIEKERRERERE---RERERERRERERE 328
Query: 274 AEHFKTWE---EQEDNFHLQQAKLRSKIRIRD 302
E + E E+E + + R+K R RD
Sbjct: 329 REREREREKEKERERERERDRDRDRTKERDRD 360
Score = 34.7 bits (78), Expect = 0.34
Identities = 20/72 (27%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 214 KALEKKGISHLEEKELKERNKRIQEDNRLELQKVKQLRLEREREKAMREQELEMLQREKE 273
K E+KG E +E+ E+ +R +E R ++ ++ ERERE+ +++ +RE++
Sbjct: 290 KLEEEKGKKEKERQEI-EKERRERERERERERERREREREREREREREKEKERERERERD 348
Query: 274 AEHFKTWEEQED 285
+ +T E D
Sbjct: 349 RDRDRTKERDRD 360
Score = 32.3 bits (72), Expect = 1.7
Identities = 36/171 (21%), Positives = 71/171 (41%), Gaps = 15/171 (8%)
Query: 4 DTRSRSRSAGRRGRRRQSQSGSRSRSRSHGRRNRRRREDEGRR---RRRRRSRERRSDSE 60
+ + R + A + R + + R ++R + + RE+E RR + +R +E D +
Sbjct: 447 ERKLREKEAAYQERLKNWEIRERKKTREYEKE--AEREEERRREMAKEAKRLKEFLEDYD 504
Query: 61 EER-----WQRSGMRSRSPPRPKWHSRDGSSQSDSGEEQSRGQWARRRRRARSWSPSSSA 115
++R ++ S ++ R R K D + EE R+R P A
Sbjct: 505 DDRDDPKYYRGSALQKRLRDREKEMEADERDRKREKEELEE----IRQRLLAEGHPDPDA 560
Query: 116 SSSASPGRSQSPRAAAAALSQQQSLQERLRLREERKQQEELMKAFETPEEK 166
++ R + +S +E +E+ +++EE M+ E PE+K
Sbjct: 561 ELQRMEQEAERRRQPQIK-QEPESEEEEEEKQEKEEKREEPMEEEEEPEQK 610
>gi|117938251 BCL2-associated transcription factor 1 isoform 2 [Homo
sapiens]
Length = 869
Score = 71.6 bits (174), Expect = 2e-12
Identities = 69/220 (31%), Positives = 94/220 (42%), Gaps = 29/220 (13%)
Query: 6 RSRSRSAGRRGRRRQSQSGSRSRSRSHGR----RNRRRREDEGRRRRRRRSRERRSDSEE 61
RS SRS R + R SQS SRSRSRSH R R+R R R R R SR+ R D
Sbjct: 3 RSNSRSHSSRSKSR-SQSSSRSRSRSHSRKKRYRSRSRTYSRSRSRDRMYSRDYRRDYRN 61
Query: 62 ERWQR----------------SGMRSRSPPRPKW---HSRD---GSSQSDSGEEQSRGQW 99
R R G R RP W HSR G S+S S + +S
Sbjct: 62 NRGMRRPYGYRGRGRGYYQGGGGRYHRGGYRPVWNRRHSRSPRRGRSRSRSPKRRSVSSQ 121
Query: 100 ARRRRRARSWSPSSSASSSASPGRSQSPRAAAAALSQQQSLQERLRLREERKQQEELMKA 159
R R RS+ S S SS+S RS SP + + ++ S +++ + E Q+E +K+
Sbjct: 122 RSRSRSRRSYRSSRSPRSSSS--RSSSPYSKSPVSKRRGSQEKQTKKAEGEPQEESPLKS 179
Query: 160 FETPEEKRARRLAKKEAKERKKREKMGWGEEYMGYTNTDN 199
E K E+ + + G+ + G + DN
Sbjct: 180 KSQEEPKDTFEHDPSESIDEFNKSSATSGDIWPGLSAYDN 219
Score = 37.0 bits (84), Expect = 0.068
Identities = 47/151 (31%), Positives = 60/151 (39%), Gaps = 23/151 (15%)
Query: 3 RDTRSRSRSAGRRGRRRQSQSGSRSRSRSHGRRNRRRREDEGRRR---------RRRRSR 53
R RSRSRS RR S SRSRSR R +R R R +RR S+
Sbjct: 104 RRGRSRSRSPKRRS---VSSQRSRSRSRRSYRSSRSPRSSSSRSSSPYSKSPVSKRRGSQ 160
Query: 54 ERRSDSEE-ERWQRSGMRSRSPPRPK-WHSRDGSSQSDSGEEQSRGQWARRRRRARSWSP 111
E+++ E E + S ++S+S PK D S D + S W P
Sbjct: 161 EKQTKKAEGEPQEESPLKSKSQEEPKDTFEHDPSESIDEFNKSS-------ATSGDIW-P 212
Query: 112 SSSASSSASPGRSQSPRAAAAALSQQQSLQE 142
SA + SP SP A SQ S +
Sbjct: 213 GLSAYDN-SPRSPHSPSPIATPPSQSSSCSD 242
Score = 34.7 bits (78), Expect = 0.34
Identities = 39/132 (29%), Positives = 49/132 (37%), Gaps = 24/132 (18%)
Query: 3 RDTRSRSRSAGRRGRRRQSQSGSRSR----------SRSHGRRNRRRREDEGRRRRR--- 49
R+ R R G RGR R G R +R H R RR R +RR
Sbjct: 60 RNNRGMRRPYGYRGRGRGYYQGGGGRYHRGGYRPVWNRRHSRSPRRGRSRSRSPKRRSVS 119
Query: 50 -RRSRERRSDSEEERWQRSGMRSRSPPRPKWHSRDGSSQSDSGEEQSRGQWARRRRRARS 108
+RSR R +RS SRSP SR S S S + RG ++ ++A
Sbjct: 120 SQRSRSRS--------RRSYRSSRSPRSSS--SRSSSPYSKSPVSKRRGSQEKQTKKAEG 169
Query: 109 WSPSSSASSSAS 120
S S S
Sbjct: 170 EPQEESPLKSKS 181
Score = 31.2 bits (69), Expect = 3.7
Identities = 37/178 (20%), Positives = 65/178 (36%), Gaps = 9/178 (5%)
Query: 102 RRRRARSWSPSSSASSSASPGRSQSPRAAAAALSQQQSLQERLRLREERKQQEELMKAFE 161
RRR+ RS S S S G + + + + RE+ + A
Sbjct: 697 RRRKERSKERGDSKGSRESSGSRKQEKTPKDYKEYKSYKDDSKHKREQDHSRSSSSSASP 756
Query: 162 TPEEKRARRLAKKEAKER-KKREKMGWGEEYMGYTNTDNP---FGDNNLLGTFIWNKALE 217
+ R + +KKE +E K +M +EY G+ P F D+ G W K
Sbjct: 757 SSPSSREEKESKKEREEEFKTHHEM---KEYSGFAGVSRPRGTFHDDRDDGVDYWAK--R 811
Query: 218 KKGISHLEEKELKERNKRIQEDNRLELQKVKQLRLEREREKAMREQELEMLQREKEAE 275
+G + + K+ + K + + + E+ M E + +R++E E
Sbjct: 812 GRGRGTFQRGRGRFNFKKSGSSPKWTHDKYQGDGIVEDEEETMENNEEKKDRRKEEKE 869
>gi|169218320 PREDICTED: similar to BCL2-associated transcription
factor 1 isoform 2 [Homo sapiens]
Length = 869
Score = 71.2 bits (173), Expect = 3e-12
Identities = 69/220 (31%), Positives = 94/220 (42%), Gaps = 29/220 (13%)
Query: 6 RSRSRSAGRRGRRRQSQSGSRSRSRSHGR----RNRRRREDEGRRRRRRRSRERRSDSEE 61
RS SRS R + R SQS SRSRSRSH R R+R R R R R SR+ R D
Sbjct: 3 RSNSRSHSSRSKSR-SQSSSRSRSRSHSRKKRYRSRSRTYSRSRSRDRMYSRDYRRDYRN 61
Query: 62 ERWQR----------------SGMRSRSPPRPKW---HSRD---GSSQSDSGEEQSRGQW 99
R R G R RP W HSR G S+S S + +S
Sbjct: 62 NRAMRRPYGYRGRGRGYYQGGGGRYHRGGYRPVWNRRHSRSPRRGRSRSRSPKRRSVSSQ 121
Query: 100 ARRRRRARSWSPSSSASSSASPGRSQSPRAAAAALSQQQSLQERLRLREERKQQEELMKA 159
R R RS+ S S SS+S RS SP + + ++ S +++ + E Q+E +K+
Sbjct: 122 RSRSRSRRSYRSSRSPRSSSS--RSSSPYSKSPVSKRRGSQEKQTKKAEGEPQEESPLKS 179
Query: 160 FETPEEKRARRLAKKEAKERKKREKMGWGEEYMGYTNTDN 199
E K E+ + + G+ + G + DN
Sbjct: 180 KSQEEPKDTFEHDPSESIDEFNKSSATSGDIWPGLSAYDN 219
Score = 37.0 bits (84), Expect = 0.068
Identities = 47/151 (31%), Positives = 60/151 (39%), Gaps = 23/151 (15%)
Query: 3 RDTRSRSRSAGRRGRRRQSQSGSRSRSRSHGRRNRRRREDEGRRR---------RRRRSR 53
R RSRSRS RR S SRSRSR R +R R R +RR S+
Sbjct: 104 RRGRSRSRSPKRRS---VSSQRSRSRSRRSYRSSRSPRSSSSRSSSPYSKSPVSKRRGSQ 160
Query: 54 ERRSDSEE-ERWQRSGMRSRSPPRPK-WHSRDGSSQSDSGEEQSRGQWARRRRRARSWSP 111
E+++ E E + S ++S+S PK D S D + S W P
Sbjct: 161 EKQTKKAEGEPQEESPLKSKSQEEPKDTFEHDPSESIDEFNKSS-------ATSGDIW-P 212
Query: 112 SSSASSSASPGRSQSPRAAAAALSQQQSLQE 142
SA + SP SP A SQ S +
Sbjct: 213 GLSAYDN-SPRSPHSPSPIATPPSQSSSCSD 242
Score = 35.0 bits (79), Expect = 0.26
Identities = 39/132 (29%), Positives = 50/132 (37%), Gaps = 24/132 (18%)
Query: 3 RDTRSRSRSAGRRGRRRQSQSGSRSR----------SRSHGRRNRRRREDEGRRRRR--- 49
R+ R+ R G RGR R G R +R H R RR R +RR
Sbjct: 60 RNNRAMRRPYGYRGRGRGYYQGGGGRYHRGGYRPVWNRRHSRSPRRGRSRSRSPKRRSVS 119
Query: 50 -RRSRERRSDSEEERWQRSGMRSRSPPRPKWHSRDGSSQSDSGEEQSRGQWARRRRRARS 108
+RSR R +RS SRSP SR S S S + RG ++ ++A
Sbjct: 120 SQRSRSRS--------RRSYRSSRSPRSSS--SRSSSPYSKSPVSKRRGSQEKQTKKAEG 169
Query: 109 WSPSSSASSSAS 120
S S S
Sbjct: 170 EPQEESPLKSKS 181
Score = 30.0 bits (66), Expect = 8.3
Identities = 38/163 (23%), Positives = 65/163 (39%), Gaps = 24/163 (14%)
Query: 7 SRSRSAGRRGRRRQSQSGSRSRSRSHGRRNRRRREDE-GRRRRRRRSRERRSDSEEERWQ 65
+R +S R S S R +R G + E++ G ++ R S + R D + R +
Sbjct: 642 TRQKSPEIHRRIDISPSTLRKDTRLAGEERVFKEENQKGDKKLRCDSADLRHDIDHRRKE 701
Query: 66 RSGMRSRSPPRPKWHSRDGSSQSDSGEEQSRGQ-WARRRRRARSWSPSSSASSSASPGRS 124
RS + R + SR Q + ++ + + + R S S+SSSASP
Sbjct: 702 RS--KERGDSKGSRESRGSRKQEKTPKDYKEYKSYKDDSKHKREQDHSLSSSSSASPSSP 759
Query: 125 QSPRAAAAALSQQQSLQERLRLREERKQQEELMKAFETPEEKR 167
S REE++ ++E + F+T E +
Sbjct: 760 SS--------------------REEKESKKEREEEFKTHHEMK 782
>gi|239756241 PREDICTED: golgi autoantigen, golgin subfamily a-like
[Homo sapiens]
Length = 899
Score = 70.9 bits (172), Expect = 4e-12
Identities = 76/325 (23%), Positives = 137/325 (42%), Gaps = 46/325 (14%)
Query: 19 RQSQSGSRSRSRSHGRRNRRRREDEGRRRRR-----RRSRERRSDSEEERWQRSGMRSRS 73
R+ + R + R+ R RE EG+ R + R+ + R +E R Q +R +
Sbjct: 282 REQEKKIRKQEEKMWRQEERLREQEGKMREQEEKMWRQEKRLREQEKELREQEKELREQK 341
Query: 74 PPRPKWHSRDGSS-----QSDSGEEQSRGQWARRRRRARSWSPSSSASSSASPGRSQSPR 128
R + Q + EQ W R+ R W R Q R
Sbjct: 342 ELREQEEQMQEQEEKMWEQEEKMREQEEKMW---RQEERLWEQEKQMREQEQKMRDQEER 398
Query: 129 A---------AAAALSQQQSLQERL-RLREERKQQEELMKAFETPEE--------KRARR 170
+ +Q+ + E++ ++REE+K QE+ K + E+ +R ++
Sbjct: 399 MWEQDERLREKEERMREQEKMWEQVEKMREEKKMQEQEKKTRDQEEKMQEEERIREREKK 458
Query: 171 LAKKEAKERKKREKMGWGEEYMGYTNTDNPFGDNNLLGTFIWNKALEKKGISHLEEKELK 230
+ ++E R++ EKM EE M + + + L K E++ + EEK +
Sbjct: 459 MREEEETMREQEEKMQKQEENM-WEQEEKEWQQQRLPEQK--EKLWEQEKMQEQEEK-IW 514
Query: 231 ERNKRIQEDNRLELQKVKQLRLER---------EREKAMREQELEMLQREKEAEHFKTWE 281
E+ ++I++ + Q+ K R E+ E+E+ MR+QE +M +E+ E K +
Sbjct: 515 EQEEKIRDQEEMWGQEKKMWRQEKMREQEDQMWEQEEKMRDQEQKMWDQEERME--KKTQ 572
Query: 282 EQEDNFHLQQAKLRSKIRIRDGRAK 306
EQE Q+ K+R + R+R+ K
Sbjct: 573 EQEKKTWDQEEKMREEERMREREKK 597
Score = 70.1 bits (170), Expect = 7e-12
Identities = 67/322 (20%), Positives = 133/322 (41%), Gaps = 34/322 (10%)
Query: 3 RDTRSRSRSAGRRGRRRQSQSGSRSRSRSHGRRNRRRREDEGRRRRRRRSRERRSDSEEE 62
RD + + R R + R + +++ E+ + + ++R + +E+
Sbjct: 440 RDQEEKMQEEERIREREKKMREEEETMREQEEKMQKQEENMWEQEEKEWQQQRLPEQKEK 499
Query: 63 RWQRSGMRSRSPPRPKWHSRDGSSQSDSGEEQSRGQWARRRRRARS---WSPSSSASSSA 119
W++ M+ + W + + Q + W + + R + W
Sbjct: 500 LWEQEKMQEQE--EKIWEQEEKIRDQEEMWGQEKKMWRQEKMREQEDQMWEQEEKMRDQE 557
Query: 120 SPGRSQSPRAAAAALSQQQSL---------QERLRLREER--------KQQEELMKAFET 162
Q R Q++ +ER+R RE++ ++QEE M+ E
Sbjct: 558 QKMWDQEERMEKKTQEQEKKTWDQEEKMREEERMREREKKMREEEEMMREQEEKMQEQEE 617
Query: 163 PEEKRARRLAKKEAKERKKREKMGWGEEYMGYTNTDNPFGDNNL--LGTFIWN--KALEK 218
+++ ++ ++E K +++ EKM W +E + + + L +W K E+
Sbjct: 618 KMQEQEEKMWEQEEKMQEQEEKM-WEQEEKMWEQEEKMWEQQRLPEQKEKLWEHEKMQEQ 676
Query: 219 KGISHLEEK----ELKERNKRIQEDNRLELQKVKQLRLEREREKAMREQELEML--QREK 272
+ + EEK E E+ + QE + +K+++ REREK MRE+E EM+ Q EK
Sbjct: 677 EKMQEQEEKIWEQEKMEKKTQEQEKKTWDQEKMREEESMREREKKMREEE-EMMREQEEK 735
Query: 273 EAEHFKTWEEQEDNFHLQQAKL 294
E + +EQE+ Q+ K+
Sbjct: 736 MQEQEEKMQEQEEEMWEQEEKM 757
Score = 57.4 bits (137), Expect = 5e-08
Identities = 56/264 (21%), Positives = 114/264 (43%), Gaps = 64/264 (24%)
Query: 40 REDEGRRRRRRRSRERRSDSEEERWQRSGMRSRSPPRPKWHSRDGSSQSDSGEEQSRGQW 99
+E+ R+ R +E++ +EE+ R R R Q EQ W
Sbjct: 271 QEEMWRQEEELREQEKKIRKQEEKMWRQEERLRE-------------QEGKMREQEEKMW 317
Query: 100 ARRRRRARSWSPSSSASSSASPGRSQSPRAAAAALSQQQSLQERLRLREERKQ----QEE 155
R+ +R R + + R L +Q+ L+E+ +E+++ QEE
Sbjct: 318 -RQEKRLRE--------------QEKELREQEKELREQKELREQEEQMQEQEEKMWEQEE 362
Query: 156 LMKAFETPEEKRARRLAKKEAKERKKREKMGWGEEYMGYTNTDNPFGDNNLLGTFIWNKA 215
M+ E ++ RL ++E + R++ +KM EE M W
Sbjct: 363 KMREQEEKMWRQEERLWEQEKQMREQEQKMRDQEERM-------------------WE-- 401
Query: 216 LEKKGISHLEEKELKERNKRIQEDNRL--ELQKVKQLRLEREREKAMREQELEMLQREKE 273
+++ L+E+ +R++E ++ +++K+++ + +E+EK R+QE +M + E+
Sbjct: 402 ---------QDERLREKEERMREQEKMWEQVEKMREEKKMQEQEKKTRDQEEKMQEEERI 452
Query: 274 AEHFKTWEEQEDNFHLQQAKLRSK 297
E K E+E+ Q+ K++ +
Sbjct: 453 REREKKMREEEETMREQEEKMQKQ 476
Score = 55.5 bits (132), Expect = 2e-07
Identities = 55/298 (18%), Positives = 116/298 (38%), Gaps = 29/298 (9%)
Query: 3 RDTRSRSRSAGRRGRRRQSQSGSRSRSRSHGRRNRRRREDEGRRRRRRRSRERRS--DSE 60
++ + R + + + + ++ + + + + RE+E R R ++ RE +
Sbjct: 549 QEEKMRDQEQKMWDQEERMEKKTQEQEKKTWDQEEKMREEERMREREKKMREEEEMMREQ 608
Query: 61 EERWQRSGMRSRSPPRPKWHSRDG-SSQSDSGEEQSRGQWARRRRRARSWSPSSSASSSA 119
EE+ Q + + W + Q + EQ W + + W
Sbjct: 609 EEKMQEQEEKMQEQEEKMWEQEEKMQEQEEKMWEQEEKMWEQEEKM---WEQQRLPEQKE 665
Query: 120 SPGRSQSPRAAAAALSQQQSLQERLRLREERKQQEELMKAFETPEEKRARRLAKKEAKER 179
+ + Q++ + E+ ++ E+K QE+ K ++ + + + ++E K R
Sbjct: 666 KLWEHEKMQEQEKMQEQEEKIWEQEKM--EKKTQEQEKKTWDQEKMREEESMREREKKMR 723
Query: 180 KKREKMGWGEEYMGYTNTDNPFGDNNLLGTFIWNKALEKKGISHLEEKELKERNKRIQED 239
++ E M EE M K E++ +E+++ E+ +++ E
Sbjct: 724 EEEEMMREQEEKMQEQE----------------EKMQEQEEEMWEQEEKMWEQEEKMWEQ 767
Query: 240 NRLELQKVKQLRLEREREKAMREQELEMLQREKEAEHFKTWEEQEDNFHLQQAKLRSK 297
RL QK K E+ M+EQE Q EK + + QE+ Q+ K+R +
Sbjct: 768 QRLPEQKEKLWEHEK-----MQEQEKIWEQEEKMRDQEEKMRGQEEKMRGQEEKMRGQ 820
Score = 54.3 bits (129), Expect = 4e-07
Identities = 55/202 (27%), Positives = 90/202 (44%), Gaps = 40/202 (19%)
Query: 136 QQQSLQERL-RLREERKQQEELMKAFETPEEKRARRLAKKEAKERKKREKMGWGEEYMGY 194
Q +LQE + R EE ++QE+ ++ E ++ RL ++E K R++ EKM E+ +
Sbjct: 266 QTNTLQEEMWRQEEELREQEKKIRKQEEKMWRQEERLREQEGKMREQEEKMWRQEKRLRE 325
Query: 195 TNTDNPFGDNNLLGTFIWNKALEKKGISHLEEKELKERNKRIQEDNRLELQKVKQLRLER 254
+ + L E+K + EE+ ++ K +++ ++ Q+ K R E
Sbjct: 326 QEKELREQEKEL---------REQKELREQEEQMQEQEEKMWEQEEKMREQEEKMWRQEE 376
Query: 255 ---EREKAMREQELEMLQ------------REKE---AEHFKTWE------------EQE 284
E+EK MREQE +M REKE E K WE EQE
Sbjct: 377 RLWEQEKQMREQEQKMRDQEERMWEQDERLREKEERMREQEKMWEQVEKMREEKKMQEQE 436
Query: 285 DNFHLQQAKLRSKIRIRDGRAK 306
Q+ K++ + RIR+ K
Sbjct: 437 KKTRDQEEKMQEEERIREREKK 458
Score = 48.1 bits (113), Expect = 3e-05
Identities = 52/231 (22%), Positives = 93/231 (40%), Gaps = 54/231 (23%)
Query: 38 RRREDEGRRRRRRRSRERRS--DSEEERWQRSGMRSRSPPRPKWHSRDGSSQSDSGEEQS 95
+ RE+E R R ++ RE +EE+ Q + + W Q + EQ
Sbjct: 708 KMREEESMREREKKMREEEEMMREQEEKMQEQEEKMQEQEEEMWE------QEEKMWEQE 761
Query: 96 RGQWARRRRRARSWSPSSSASSSASPGRSQSPRAAAAALSQQQSLQERLRLREERK--QQ 153
W ++R Q++ L E +++E+ K +Q
Sbjct: 762 EKMWEQQRLP-----------------------------EQKEKLWEHEKMQEQEKIWEQ 792
Query: 154 EELMKAFETPEEKRARRLAKKEAKERKKREKMGWGEEYMGYTNTDNPFGDNNLLGTFIWN 213
EE M+ E + ++ +E K R + EKM WG+E + + +G + W
Sbjct: 793 EEKMRDQEEKMRGQEEKMRGQEEKMRGQEEKM-WGQEEKMWGQEEKMWGQEEKM----WG 847
Query: 214 KALEKKGISHLEEKELKERNKRIQEDNRLELQKVKQLRLEREREKAMREQE 264
+ E+K +EEK + K +++ ++ Q+ K RE+E+ MR QE
Sbjct: 848 Q--EEK----MEEKMQGQEEKMREQEEKMRGQEEKM----REQEEKMRGQE 888
Score = 47.0 bits (110), Expect = 7e-05
Identities = 55/306 (17%), Positives = 120/306 (39%), Gaps = 46/306 (15%)
Query: 6 RSRSRSAGRRGRRRQSQSGSRSRSRSHGRRNRRRREDEGR----RRRRRRSRERRSDSEE 61
R R R + R+ + R + + + +E E + + + E+ + EE
Sbjct: 586 REEERMREREKKMREEEEMMREQEEKMQEQEEKMQEQEEKMWEQEEKMQEQEEKMWEQEE 645
Query: 62 ERWQRSGM---RSRSPP-RPKWHSRDGSSQSDSGEEQSRGQWARRR-------RRARSWS 110
+ W++ + R P + K + + + +EQ W + + + ++W
Sbjct: 646 KMWEQEEKMWEQQRLPEQKEKLWEHEKMQEQEKMQEQEEKIWEQEKMEKKTQEQEKKTWD 705
Query: 111 PSSSASSSASPGRSQSPRAAAAALSQQ----QSLQERLRLREER---------KQQEELM 157
+ R + R + +Q Q +E+++ +EE +Q+E++
Sbjct: 706 QEKMREEESMREREKKMREEEEMMREQEEKMQEQEEKMQEQEEEMWEQEEKMWEQEEKMW 765
Query: 158 KAFETPEEKRA----------RRLAKKEAKERKKREKMGWGEEYMGYTNTDNPFGDNNLL 207
+ PE+K ++ ++E K R + EKM EE M + +
Sbjct: 766 EQQRLPEQKEKLWEHEKMQEQEKIWEQEEKMRDQEEKMRGQEEKMRGQEEKMRGQEEKMW 825
Query: 208 GTFIWNKALEKKGISHLEEKELKERNKRIQEDNRLELQKVKQLRLEREREKAMREQELEM 267
G +++ + EEK + K ++ ++E + Q RE+E+ MR QE +M
Sbjct: 826 G--------QEEKMWGQEEKMWGQEEKMWGQEEKMEEKMQGQEEKMREQEEKMRGQEEKM 877
Query: 268 LQREKE 273
++E++
Sbjct: 878 REQEEK 883
Score = 37.4 bits (85), Expect = 0.052
Identities = 61/292 (20%), Positives = 112/292 (38%), Gaps = 30/292 (10%)
Query: 16 GRRRQSQSGSRSRSRSHGRRNRRRREDEGRRRRRRRSRERRS-DSEEERWQRSGMRSRSP 74
G ++ + S ++NR + ++E + + + RR ++++ + +
Sbjct: 55 GTNPETTTSGGCHSPEDTQQNRAQLKEEKKASHQHQEALRREIEAQDHTIRILTCQKTEL 114
Query: 75 PRPKWHSRDGSSQSDSGEEQSRGQWARRRRRARSWSPSSSASSSASPGRSQSPRAAAAAL 134
++S+D + + + G + + +A SP S+S PG S+
Sbjct: 115 ETALYYSQDAARKFEDGNLGTPSSFNLALSQAFRGSPLGCVSTSLIPGESKDLAG----- 169
Query: 135 SQQQSLQERLRLREERKQQEELMKAFE--TPEEKRARRLAKKEAKERKKREKMGWGEEYM 192
RL EL +A + K+A R ++ KER E
Sbjct: 170 ----------RLHHSWHFAGELQRALSAVSTRHKKADRYIEELTKERDALSL-----ELY 214
Query: 193 GYTNTDNPFGDNNLLGTFIWNKALEKKGISHLEEKELKERNKRIQ------EDNRLELQK 246
T T+ N A +K L KELK + +R + + N L+ +
Sbjct: 215 RNTITNEELKKKNAELQEKLPLAESEKSEIQLNVKELKRKLERAKFLLPQVQTNTLQEEM 274
Query: 247 VKQLRLEREREKAMREQELEML-QREKEAEHFKTWEEQEDNFHLQQAKLRSK 297
+Q RE+EK +R+QE +M Q E+ E EQE+ Q+ +LR +
Sbjct: 275 WRQEEELREQEKKIRKQEEKMWRQEERLREQEGKMREQEEKMWRQEKRLREQ 326
Score = 30.0 bits (66), Expect = 8.3
Identities = 35/210 (16%), Positives = 79/210 (37%), Gaps = 35/210 (16%)
Query: 1 MGRDTRSRSRSAGRRGRRRQSQSGSRSRSRSHGRRNRRRREDEGRRRRRRRSRERRSD-- 58
M + T+ + + + + R+ +S + R ++E + + + +E+ +
Sbjct: 692 MEKKTQEQEKKTWDQEKMREEESMREREKKMREEEEMMREQEEKMQEQEEKMQEQEEEMW 751
Query: 59 -SEEERWQRSGM---RSRSPPRPK--------------WHS----RDGSSQSDSGEEQSR 96
EE+ W++ + R P + + W RD + EE+ R
Sbjct: 752 EQEEKMWEQEEKMWEQQRLPEQKEKLWEHEKMQEQEKIWEQEEKMRDQEEKMRGQEEKMR 811
Query: 97 GQWARRR-RRARSWSPSSSASSSASPGRSQSPRAAAAALSQQQSLQERLRLREERKQQEE 155
GQ + R + + W Q + Q++ ++E+++ QEE
Sbjct: 812 GQEEKMRGQEEKMWGQEEKMWGQEEKMWGQEEKM----WGQEEKMEEKMQ------GQEE 861
Query: 156 LMKAFETPEEKRARRLAKKEAKERKKREKM 185
M+ E + ++ ++E K R + EK+
Sbjct: 862 KMREQEEKMRGQEEKMREQEEKMRGQEEKI 891
>gi|239745095 PREDICTED: hypothetical protein LOC645202 [Homo
sapiens]
Length = 570
Score = 70.9 bits (172), Expect = 4e-12
Identities = 63/297 (21%), Positives = 126/297 (42%), Gaps = 31/297 (10%)
Query: 19 RQSQSGSRSRSRSHGRRNRRRREDEGRRRRRR---RSRERRSDSEEERWQRSG----MRS 71
RQ + + + + R ++E RR+ E+ EE W++ +
Sbjct: 292 RQEEKIQEREEKIQEQEEKIREQEEKMRRQEEMMWEKEEKMRRQEEMMWEKEEKIRELEE 351
Query: 72 RSPPRPKWHSRDGSSQSDSGEEQSRGQWARRRRRARSWSPSSSASSSASPGRSQSPRAAA 131
+ + K ++ Q EE+ R Q R+ + A+ W R Q
Sbjct: 352 KMHEQEKIREQEEKRQE---EEKIREQEKRQEQEAKMWRQEEKIREQEEKIREQEEMMQE 408
Query: 132 AALSQQQSLQERLRLREERKQQEELMKAFETPEEKRARRLAKKEAKERKKREKMGWGEEY 191
+ ++ EE ++QEE M+ E ++ +++ ++E K R++ E M EE
Sbjct: 409 QEEKMGEQEEKMWEQEEEMQEQEEKMRRQEEKIREQEKKIREQEEKIREQEEMMQEQEEK 468
Query: 192 MGYTNTDNPFGDNNLLGTFIWNKALEKKGISHLEEKELKERNKRIQEDNRLELQKVKQLR 251
MG K E++ +E++++ + ++I+E + ++ +++
Sbjct: 469 MGEQE----------------GKMCEQEAKMQEQEEKMRRQEEKIREQEKKIREQEEKI- 511
Query: 252 LEREREKAMREQELEML-QREKEAEHFKTWEEQEDNFHLQQAKLR-SKIRIRDGRAK 306
RE+E+ M+EQE +M Q EK E + +EQE+ Q+ K+R ++R+R K
Sbjct: 512 --REQEEMMQEQEEKMWEQEEKMCEQEEKMQEQEEKMRRQEEKMREQEVRLRQQEEK 566
Score = 60.5 bits (145), Expect = 6e-09
Identities = 62/225 (27%), Positives = 106/225 (47%), Gaps = 33/225 (14%)
Query: 101 RRRRRARSWSPSSSASSSASP-GRS-QSPRAAAAALSQQQSLQERLRLREERKQQEELMK 158
R+ RA+ P + A G+ QS A A ++ L RL +QQEE M
Sbjct: 237 RKLERAKLLLPQQQLQAEADHLGKELQSVSAKLQAQVEENELWNRLN-----QQQEEKMW 291
Query: 159 AFETPEEKRARRLAKKEAKERKKREKMGWGEEYMGYTNTDNPFGDNNLLGTFIWNKALEK 218
E ++R ++ ++E K R++ EKM EE M + + ++ W K +
Sbjct: 292 RQEEKIQEREEKIQEQEEKIREQEEKMRRQEEMM-WEKEEKMRRQEEMM----WEK---E 343
Query: 219 KGISHLEEK-----------ELKERNKRIQEDNRLELQKVKQLRLE---REREKAMREQE 264
+ I LEEK E ++ ++I+E + + Q+ K R E RE+E+ +REQE
Sbjct: 344 EKIRELEEKMHEQEKIREQEEKRQEEEKIREQEKRQEQEAKMWRQEEKIREQEEKIREQE 403
Query: 265 LEMLQREKE---AEHFKTWEEQEDNFHLQQAKLRSKIRIRDGRAK 306
EM+Q ++E + K WE++E+ ++ R + +IR+ K
Sbjct: 404 -EMMQEQEEKMGEQEEKMWEQEEEMQEQEEKMRRQEEKIREQEKK 447
Score = 54.3 bits (129), Expect = 4e-07
Identities = 45/247 (18%), Positives = 109/247 (44%), Gaps = 31/247 (12%)
Query: 30 RSHGRRNRRRREDEGRRRRRRRSRERRSDSEEERWQRSGMRSRSPPRPKWHSRDGSSQSD 89
+ H + R +E++ + + R +E+R + E + W++ + + Q +
Sbjct: 352 KMHEQEKIREQEEKRQEEEKIREQEKRQEQEAKMWRQEEKIREQEEKIREQEEMMQEQEE 411
Query: 90 SGEEQSRGQWARRRRRARSWSPSSSASSSASPGRSQSPRAAAAALSQQQSLQERLRLREE 149
EQ W + + + R + +Q+ +++R +EE
Sbjct: 412 KMGEQEEKMWEQEEEMQE---------------QEEKMRRQEEKIREQE---KKIREQEE 453
Query: 150 R-KQQEELMKAFETPEEKRARRLAKKEAKERKKREKMGWGEEYMGYTNTDNPFGDNNLLG 208
+ ++QEE+M+ E ++ ++ ++EAK +++ EKM EE + + +
Sbjct: 454 KIREQEEMMQEQEEKMGEQEGKMCEQEAKMQEQEEKMRRQEEKIREQEKKIREQEEKIRE 513
Query: 209 TFIWNKALEKKGISHLEEKELKERNKRIQEDNRLELQKVKQLRLEREREKAMREQELEML 268
+++ + EEK ++ K +++ +++ Q+ K R +E+ MREQE+ +
Sbjct: 514 --------QEEMMQEQEEKMWEQEEKMCEQEEKMQEQEEKM----RRQEEKMREQEVRLR 561
Query: 269 QREKEAE 275
Q+E++ +
Sbjct: 562 QQEEKMQ 568
Score = 34.7 bits (78), Expect = 0.34
Identities = 29/184 (15%), Positives = 74/184 (40%), Gaps = 10/184 (5%)
Query: 3 RDTRSRSRSAGRRGRRRQSQSGSRSRSRSHGRRNRRRREDEGRRRRRR-RSRERRSDSEE 61
R+ + R + ++ + G + + +E++ RR+ + R +E++ +E
Sbjct: 393 REQEEKIREQEEMMQEQEEKMGEQEEKMWEQEEEMQEQEEKMRRQEEKIREQEKKIREQE 452
Query: 62 ERWQRSGMRSRSPPRPKWHSRDGSSQSDSGEEQSRGQWARRRRRARSWSPSSSASSSASP 121
E+ +R + + + G + E++++ Q + R +
Sbjct: 453 EK-----IREQEEMMQEQEEKMGEQEGKMCEQEAKMQEQEEKMRRQE----EKIREQEKK 503
Query: 122 GRSQSPRAAAAALSQQQSLQERLRLREERKQQEELMKAFETPEEKRARRLAKKEAKERKK 181
R Q + Q+ ++ E+ +QEE M+ E ++ ++ ++E + R++
Sbjct: 504 IREQEEKIREQEEMMQEQEEKMWEQEEKMCEQEEKMQEQEEKMRRQEEKMREQEVRLRQQ 563
Query: 182 REKM 185
EKM
Sbjct: 564 EEKM 567
Score = 31.2 bits (69), Expect = 3.7
Identities = 21/60 (35%), Positives = 36/60 (60%), Gaps = 11/60 (18%)
Query: 224 LEEKELKERNKRIQEDNRL------ELQ-KVKQLRLEREREKAMREQELEMLQREKEAEH 276
+ ++ELKE+N ++QE +L E+Q VK+L+ + ER K + Q+ Q + EA+H
Sbjct: 202 ITDEELKEKNAKLQEKLQLVESEKSEIQLNVKELKRKLERAKLLLPQQ----QLQAEADH 257
>gi|117938254 BCL2-associated transcription factor 1 isoform 3 [Homo
sapiens]
Length = 747
Score = 70.9 bits (172), Expect = 4e-12
Identities = 69/222 (31%), Positives = 94/222 (42%), Gaps = 31/222 (13%)
Query: 6 RSRSRSAGRRGRRRQSQSGSRSRSRSHGR------RNRRRREDEGRRRRRRRSRERRSDS 59
RS SRS R + R SQS SRSRSRSH R R+R R R R R SR+ R D
Sbjct: 3 RSNSRSHSSRSKSR-SQSSSRSRSRSHSRKKRYSSRSRSRTYSRSRSRDRMYSRDYRRDY 61
Query: 60 EEERWQR----------------SGMRSRSPPRPKW---HSRD---GSSQSDSGEEQSRG 97
R R G R RP W HSR G S+S S + +S
Sbjct: 62 RNNRGMRRPYGYRGRGRGYYQGGGGRYHRGGYRPVWNRRHSRSPRRGRSRSRSPKRRSVS 121
Query: 98 QWARRRRRARSWSPSSSASSSASPGRSQSPRAAAAALSQQQSLQERLRLREERKQQEELM 157
R R RS+ S S SS+S RS SP + + ++ S +++ + E Q+E +
Sbjct: 122 SQRSRSRSRRSYRSSRSPRSSSS--RSSSPYSKSPVSKRRGSQEKQTKKAEGEPQEESPL 179
Query: 158 KAFETPEEKRARRLAKKEAKERKKREKMGWGEEYMGYTNTDN 199
K+ E K E+ + + G+ + G + DN
Sbjct: 180 KSKSQEEPKDTFEHDPSESIDEFNKSSATSGDIWPGLSAYDN 221
Score = 34.7 bits (78), Expect = 0.34
Identities = 39/132 (29%), Positives = 49/132 (37%), Gaps = 24/132 (18%)
Query: 3 RDTRSRSRSAGRRGRRRQSQSGSRSR----------SRSHGRRNRRRREDEGRRRRR--- 49
R+ R R G RGR R G R +R H R RR R +RR
Sbjct: 62 RNNRGMRRPYGYRGRGRGYYQGGGGRYHRGGYRPVWNRRHSRSPRRGRSRSRSPKRRSVS 121
Query: 50 -RRSRERRSDSEEERWQRSGMRSRSPPRPKWHSRDGSSQSDSGEEQSRGQWARRRRRARS 108
+RSR R +RS SRSP SR S S S + RG ++ ++A
Sbjct: 122 SQRSRSRS--------RRSYRSSRSPRSSS--SRSSSPYSKSPVSKRRGSQEKQTKKAEG 171
Query: 109 WSPSSSASSSAS 120
S S S
Sbjct: 172 EPQEESPLKSKS 183
Score = 31.2 bits (69), Expect = 3.7
Identities = 35/122 (28%), Positives = 51/122 (41%), Gaps = 36/122 (29%)
Query: 46 RRRRRRSRERRSDSEEERWQRSGMRSRSPPRPKWHSRDGSSQSDSGEEQSRGQWARRRRR 105
RRR+ RS+ER DS+ R + SG R + PK + S + DS +
Sbjct: 526 RRRKERSKER-GDSKGSR-ESSGSRKQEKT-PKDYKEYKSYKDDS-------------KH 569
Query: 106 ARSWSPSSSASSSASPGRSQSPRAAAAALSQQQSLQERLRLREERKQQEELMKAFETPEE 165
R S S+SSSASP S REE++ ++E + F+T E
Sbjct: 570 KREQDHSRSSSSSASPSSPSS--------------------REEKESKKEREEEFKTHHE 609
Query: 166 KR 167
+
Sbjct: 610 MK 611
>gi|7661958 BCL2-associated transcription factor 1 isoform 1 [Homo
sapiens]
Length = 920
Score = 70.9 bits (172), Expect = 4e-12
Identities = 69/222 (31%), Positives = 94/222 (42%), Gaps = 31/222 (13%)
Query: 6 RSRSRSAGRRGRRRQSQSGSRSRSRSHGR------RNRRRREDEGRRRRRRRSRERRSDS 59
RS SRS R + R SQS SRSRSRSH R R+R R R R R SR+ R D
Sbjct: 3 RSNSRSHSSRSKSR-SQSSSRSRSRSHSRKKRYSSRSRSRTYSRSRSRDRMYSRDYRRDY 61
Query: 60 EEERWQR----------------SGMRSRSPPRPKW---HSRD---GSSQSDSGEEQSRG 97
R R G R RP W HSR G S+S S + +S
Sbjct: 62 RNNRGMRRPYGYRGRGRGYYQGGGGRYHRGGYRPVWNRRHSRSPRRGRSRSRSPKRRSVS 121
Query: 98 QWARRRRRARSWSPSSSASSSASPGRSQSPRAAAAALSQQQSLQERLRLREERKQQEELM 157
R R RS+ S S SS+S RS SP + + ++ S +++ + E Q+E +
Sbjct: 122 SQRSRSRSRRSYRSSRSPRSSSS--RSSSPYSKSPVSKRRGSQEKQTKKAEGEPQEESPL 179
Query: 158 KAFETPEEKRARRLAKKEAKERKKREKMGWGEEYMGYTNTDN 199
K+ E K E+ + + G+ + G + DN
Sbjct: 180 KSKSQEEPKDTFEHDPSESIDEFNKSSATSGDIWPGLSAYDN 221
Score = 34.7 bits (78), Expect = 0.34
Identities = 39/132 (29%), Positives = 49/132 (37%), Gaps = 24/132 (18%)
Query: 3 RDTRSRSRSAGRRGRRRQSQSGSRSR----------SRSHGRRNRRRREDEGRRRRR--- 49
R+ R R G RGR R G R +R H R RR R +RR
Sbjct: 62 RNNRGMRRPYGYRGRGRGYYQGGGGRYHRGGYRPVWNRRHSRSPRRGRSRSRSPKRRSVS 121
Query: 50 -RRSRERRSDSEEERWQRSGMRSRSPPRPKWHSRDGSSQSDSGEEQSRGQWARRRRRARS 108
+RSR R +RS SRSP SR S S S + RG ++ ++A
Sbjct: 122 SQRSRSRS--------RRSYRSSRSPRSSS--SRSSSPYSKSPVSKRRGSQEKQTKKAEG 171
Query: 109 WSPSSSASSSAS 120
S S S
Sbjct: 172 EPQEESPLKSKS 183
Score = 31.2 bits (69), Expect = 3.7
Identities = 35/122 (28%), Positives = 51/122 (41%), Gaps = 36/122 (29%)
Query: 46 RRRRRRSRERRSDSEEERWQRSGMRSRSPPRPKWHSRDGSSQSDSGEEQSRGQWARRRRR 105
RRR+ RS+ER DS+ R + SG R + PK + S + DS +
Sbjct: 699 RRRKERSKER-GDSKGSR-ESSGSRKQEKT-PKDYKEYKSYKDDS-------------KH 742
Query: 106 ARSWSPSSSASSSASPGRSQSPRAAAAALSQQQSLQERLRLREERKQQEELMKAFETPEE 165
R S S+SSSASP S REE++ ++E + F+T E
Sbjct: 743 KREQDHSRSSSSSASPSSPSS--------------------REEKESKKEREEEFKTHHE 782
Query: 166 KR 167
+
Sbjct: 783 MK 784
>gi|239745089 PREDICTED: golgi autoantigen, golgin subfamily a-like
[Homo sapiens]
Length = 828
Score = 70.5 bits (171), Expect = 6e-12
Identities = 76/322 (23%), Positives = 139/322 (43%), Gaps = 33/322 (10%)
Query: 6 RSRSRSAGRRGRRRQSQSGSRSRSRSHGRRNRRRREDEGRRRRRRRSRERRS---DSEEE 62
R R + G+ R+ + R + + + + RE E R +++ RE+ + EE+
Sbjct: 259 RQEERLREQEGKMREQEEKMRRQEKRLREQEKELREQEKELREQKKLREQEEQMQEQEEK 318
Query: 63 RWQRSGMRSRSPPRPKWHSRDGSSQSDSGEEQSRGQWARRR-RRARSWSPSSSASSSASP 121
W++ + R W + + E+Q R Q + R + R W
Sbjct: 319 MWEQE-EKMREQEEKMWRQEERLWEQ---EKQMREQEQKMRDQEERMWEQDERLREKEER 374
Query: 122 GRSQSPRAAAAALSQQQSLQERLRLREERK---QQEELMKAFETPEEKRARRLAKKEAKE 178
R Q Q++ +QE R+RE K ++EE M+ E +K+ + ++E KE
Sbjct: 375 MREQE-----KMWEQEEKMQEEERIREREKKMREEEETMREQEEKMQKQEENMWEQEEKE 429
Query: 179 ------RKKREKMGWGEEYMG------YTNTDNPFGDNNLLG--TFIWNKALEKKGISHL 224
+++EK+ W +E M + + + G +W + ++ +
Sbjct: 430 WQQQRLPEQKEKL-WEQEKMQEQEEKIWEQEEKIRDQEEMWGQEKKMWRQEKMREQEDQM 488
Query: 225 EEKELKERNKRIQEDNRLELQKVKQLRLEREREKAMREQELEMLQREKEAEHFKTWEEQE 284
E+E K R++ + ++ E + RL RE+E+ MREQ+ Q EK E KT +EQE
Sbjct: 489 WEQEEKMRDQEQKMWDQEERMWEQDERL-REKEERMREQKKMWQQEEKMREEKKT-QEQE 546
Query: 285 DNFHLQQAKLRSKIRIRDGRAK 306
Q+ K+R + R+R+ K
Sbjct: 547 KKTWDQEEKMREEERMREREKK 568
Score = 69.3 bits (168), Expect = 1e-11
Identities = 73/284 (25%), Positives = 125/284 (44%), Gaps = 19/284 (6%)
Query: 18 RRQSQSGSRSRSRSHGRRNRRRREDEGRRRRRRRSRERRSD-SEEERWQRSGMRSRSPPR 76
R+Q + R R + + R ++E RR+ +R RE+ + E+E+ R + R
Sbjct: 251 RKQEEKMWRQEERLREQEGKMREQEEKMRRQEKRLREQEKELREQEKELREQKKLREQEE 310
Query: 77 PKWHSRDGS-SQSDSGEEQSRGQWARRRRRARSWSPSSSASSSASPGRSQSPRAAAAALS 135
+ Q + EQ W R+ R W R Q R
Sbjct: 311 QMQEQEEKMWEQEEKMREQEEKMW---RQEERLWEQEKQMREQEQKMRDQEERMWEQD-E 366
Query: 136 QQQSLQERLRLREERKQQEELMKAFETPEEKRARRLAKKEAKERKKREKMGWGEEYMGYT 195
+ + +ER+R +E+ +QEE M+ E E R +++ ++E R++ EKM EE M +
Sbjct: 367 RLREKEERMREQEKMWEQEEKMQEEERIRE-REKKMREEEETMREQEEKMQKQEENM-WE 424
Query: 196 NTDNPFGDNNLLGTFIWNKALEKKGISHLEEKELKERNKRIQEDNRLELQKVKQLRLE-- 253
+ + L K E++ + EEK + E+ ++I++ + Q+ K R E
Sbjct: 425 QEEKEWQQQRLPEQ--KEKLWEQEKMQEQEEK-IWEQEEKIRDQEEMWGQEKKMWRQEKM 481
Query: 254 REREKAMREQELEMLQREKEAEHFKTWEEQEDNFHLQQAKLRSK 297
RE+E M EQE +M +E+ K W +QE+ Q +LR K
Sbjct: 482 REQEDQMWEQEEKMRDQEQ-----KMW-DQEERMWEQDERLREK 519
Score = 65.1 bits (157), Expect = 2e-10
Identities = 58/268 (21%), Positives = 121/268 (45%), Gaps = 38/268 (14%)
Query: 38 RRREDEGRRRRRRRSRERRSDSEEERWQRSGMRSRSPPRPKWHSRDGSSQSDSGEEQSRG 97
R +E+ + ++ +E+ + E++ W++ + R + W + + D E+ R
Sbjct: 463 RDQEEMWGQEKKMWRQEKMREQEDQMWEQEE-KMRDQEQKMWDQEERMWEQD---ERLRE 518
Query: 98 QWARRRRRARSWSPSSSASSSASPGRSQSPRAAAAALSQQQSLQERLRLREERK---QQE 154
+ R R + + W + Q++ ++E R+RE K ++E
Sbjct: 519 KEERMREQKKMWQQEEKMREEKKTQEQEKK-----TWDQEEKMREEERMREREKKMREEE 573
Query: 155 ELMKAFETPEEKRARRLAKKEAKERKKREKMGWGEEYMGYTNTDNPFGDNNLLGTFIWNK 214
E+M+ E +++ ++ ++E K ++ EKM EE M W +
Sbjct: 574 EMMREQEEKMQEQEEKMREQEEKMWEQEEKMQEQEEKM-------------------WEQ 614
Query: 215 ALEKKGISHLEEKELKERNKRI-QEDNRLELQKVKQLRLE---REREKAMREQELEML-Q 269
E+K EE +++E+ + + +++ +++ Q+ K E RE+E+ MREQE +M Q
Sbjct: 615 --EEKMWEQEEEDKMQEQEEMMWEQEEKMQEQEEKMWEQEEKMREQEEKMREQEEKMQGQ 672
Query: 270 REKEAEHFKTWEEQEDNFHLQQAKLRSK 297
EK E + + QE+ Q+ K+R +
Sbjct: 673 EEKMREQEEKMQGQEEKMREQEEKMRGQ 700
Score = 62.8 bits (151), Expect = 1e-09
Identities = 62/325 (19%), Positives = 128/325 (39%), Gaps = 39/325 (12%)
Query: 3 RDTRSRSRSAGRRGRRR--QSQSGSRSRSRSHGRRNRRRREDEGRRRRRRRSRERRS--- 57
+D R R + R + + + + + R R + R E+E R + + +++
Sbjct: 364 QDERLREKEERMREQEKMWEQEEKMQEEERIREREKKMREEEETMREQEEKMQKQEENMW 423
Query: 58 DSEEERWQRSGM-----------RSRSPPRPKWHSRDGSSQSDSGEEQSRGQWARRRRRA 106
+ EE+ WQ+ + + + W + + Q + W + + R
Sbjct: 424 EQEEKEWQQQRLPEQKEKLWEQEKMQEQEEKIWEQEEKIRDQEEMWGQEKKMWRQEKMRE 483
Query: 107 RS---WSPSSSASSSASPGRSQSPRA----------AAAALSQQQSLQERLRLREERKQQ 153
+ W Q R Q++ Q+ ++REE+K Q
Sbjct: 484 QEDQMWEQEEKMRDQEQKMWDQEERMWEQDERLREKEERMREQKKMWQQEEKMREEKKTQ 543
Query: 154 EELMKAFETPEEKRAR-RLAKKEAKERKKREKMGWGEEYMGYTNTDNPFGDNNLLGTFIW 212
E+ K ++ E+ R R+ ++E K R++ E M EE M + + W
Sbjct: 544 EQEKKTWDQEEKMREEERMREREKKMREEEEMMREQEEKMQEQEEKMREQEEKM-----W 598
Query: 213 NKALEKKGISHLEEKELKERNKRIQEDNRLELQKVKQLRLEREREKAMREQELEMLQREK 272
+++ + EEK ++ K +++ ++Q+ +++ E+E EK ++E Q EK
Sbjct: 599 E---QEEKMQEQEEKMWEQEEKMWEQEEEDKMQEQEEMMWEQE-EKMQEQEEKMWEQEEK 654
Query: 273 EAEHFKTWEEQEDNFHLQQAKLRSK 297
E + EQE+ Q+ K+R +
Sbjct: 655 MREQEEKMREQEEKMQGQEEKMREQ 679
Score = 53.5 bits (127), Expect = 7e-07
Identities = 43/182 (23%), Positives = 87/182 (47%), Gaps = 20/182 (10%)
Query: 136 QQQSLQERL-RLREERKQQEELMKAFETPEEKRARRLAKKEAKERKKREKMGWGEEYMGY 194
Q +LQE + R EE ++QE+ ++ E ++ RL ++E K R++ EKM E+ +
Sbjct: 228 QTNTLQEEMWRQEEELREQEKKIRKQEEKMWRQEERLREQEGKMREQEEKMRRQEKRLRE 287
Query: 195 TNTDNPFGDNNLLGTFIWNKALEKKGISHLEEKELKERNKRIQEDNRLELQKVKQLRLE- 253
+ + L E+K + EE+ ++ K +++ ++ Q+ K R E
Sbjct: 288 QEKELREQEKELR---------EQKKLREQEEQMQEQEEKMWEQEEKMREQEEKMWRQEE 338
Query: 254 ---------REREKAMREQELEMLQREKEAEHFKTWEEQEDNFHLQQAKLRSKIRIRDGR 304
RE+E+ MR+QE M ++++ + +++ Q+ K++ + RIR+
Sbjct: 339 RLWEQEKQMREQEQKMRDQEERMWEQDERLREKEERMREQEKMWEQEEKMQEEERIRERE 398
Query: 305 AK 306
K
Sbjct: 399 KK 400
Score = 51.2 bits (121), Expect = 3e-06
Identities = 44/158 (27%), Positives = 74/158 (46%), Gaps = 20/158 (12%)
Query: 148 EERKQQEELMKAFETPE-EKRARRLAKKEAKERKKREKMGWGEEYMGYTNTDNPFGDNNL 206
E +K+ EL + E EK +L KE K + +R K P N
Sbjct: 184 ELKKKNAELQEKLRLAESEKSEIQLNVKELKRKLERAKFLL------------PQVQTNT 231
Query: 207 LGTFIWNKALE----KKGISHLEEKELKERNKRIQEDNRLELQKVKQLRLE---REREKA 259
L +W + E +K I EEK ++ + +++ ++ Q+ K R E RE+EK
Sbjct: 232 LQEEMWRQEEELREQEKKIRKQEEKMWRQEERLREQEGKMREQEEKMRRQEKRLREQEKE 291
Query: 260 MREQELEMLQREKEAEHFKTWEEQEDNFHLQQAKLRSK 297
+REQE E+ +++K E + +EQE+ Q+ K+R +
Sbjct: 292 LREQEKELREQKKLREQEEQMQEQEEKMWEQEEKMREQ 329
Score = 49.7 bits (117), Expect = 1e-05
Identities = 51/258 (19%), Positives = 96/258 (37%), Gaps = 45/258 (17%)
Query: 3 RDTRSRSRSAGRRGRRRQSQSGSRSRSRSHGRRNRRR--------REDEGRRRRRRRSRE 54
+D R R + R +++ Q + R + ++ RE+E R R ++ RE
Sbjct: 512 QDERLREKEERMREQKKMWQQEEKMREEKKTQEQEKKTWDQEEKMREEERMREREKKMRE 571
Query: 55 RRS--DSEEERWQRSGMRSRSPPRPKWHSRDG-SSQSDSGEEQSRGQWAR------RRRR 105
+EE+ Q + R W + Q + EQ W + + +
Sbjct: 572 EEEMMREQEEKMQEQEEKMREQEEKMWEQEEKMQEQEEKMWEQEEKMWEQEEEDKMQEQE 631
Query: 106 ARSWSPSSSASSSASPGRSQSPRAAAAALSQQQSLQERLRLREERKQ-QEELMKAFETPE 164
W Q + + +E++R +EE+ Q QEE M+ E
Sbjct: 632 EMMWEQEEKMQEQEEKMWEQEEK--------MREQEEKMREQEEKMQGQEEKMREQEEKM 683
Query: 165 EKRARRLAKKEAKERKKREKMGWGEEYMGYTNTDNPFGDNNLLGTFIWNKALEKKGISHL 224
+ + ++ ++E K R + EKM WG+E +W + + G +
Sbjct: 684 QGQEEKMREQEEKMRGQEEKM-WGQEEK------------------MWGQEEKMWGQEEM 724
Query: 225 EEKELKERNKRIQEDNRL 242
EKE + R+++ + RL
Sbjct: 725 REKEERIRDQKEKMQERL 742
Score = 48.9 bits (115), Expect = 2e-05
Identities = 52/262 (19%), Positives = 106/262 (40%), Gaps = 28/262 (10%)
Query: 19 RQSQSGSRSRSRSHGRRNRRR---REDEGRRRRRRRSRERRSDSEEERWQRSGMRSRSPP 75
R + R R + R +++ +E++ R ++ + +E+++ +EE+ + R
Sbjct: 508 RMWEQDERLREKEERMREQKKMWQQEEKMREEKKTQEQEKKTWDQEEKMREE---ERMRE 564
Query: 76 RPKWHSRDGSSQSDSGEEQSRGQWARRRRRARSWSPSSSASSSASPGRSQSPRAAAAALS 135
R K + + E+ + R + + W Q +
Sbjct: 565 REKKMREEEEMMREQEEKMQEQEEKMREQEEKMWEQEEKMQEQEEKMWEQEEKMWEQEEE 624
Query: 136 QQQSLQERLRLREERKQQEELMKAFETPEEKRARRLAKKEAKERKKREKMGWGEEYMGYT 195
+ QE + +E K QE+ K +E E+ R ++E K R++ EKM EE M
Sbjct: 625 DKMQEQEEMMWEQEEKMQEQEEKMWEQEEKMR-----EQEEKMREQEEKMQGQEEKMREQ 679
Query: 196 NTDNPFGDNNLLGTFIWNKALEKKGISHLEEKELKERNKRIQEDNRLELQKVKQLRLE-- 253
+ + G +++ + EEK + K ++ ++ Q+ K E
Sbjct: 680 -------EEKMQG--------QEEKMREQEEKMRGQEEKMWGQEEKMWGQEEKMWGQEEM 724
Query: 254 REREKAMREQELEMLQREKEAE 275
RE+E+ +R+Q+ +M +R E E
Sbjct: 725 REKEERIRDQKEKMQERLPEHE 746
Score = 33.1 bits (74), Expect = 0.98
Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 14/88 (15%)
Query: 224 LEEKELKERNKRIQEDNRL------ELQ-KVKQLRLEREREKAMREQ------ELEMLQR 270
+ +ELK++N +QE RL E+Q VK+L+ + ER K + Q + EM ++
Sbjct: 180 ITNEELKKKNAELQEKLRLAESEKSEIQLNVKELKRKLERAKFLLPQVQTNTLQEEMWRQ 239
Query: 271 EKE-AEHFKTWEEQEDNFHLQQAKLRSK 297
E+E E K +QE+ Q+ +LR +
Sbjct: 240 EEELREQEKKIRKQEEKMWRQEERLREQ 267
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 70.5 bits (171), Expect = 6e-12
Identities = 63/194 (32%), Positives = 84/194 (43%), Gaps = 16/194 (8%)
Query: 3 RDTRSRSRSAGRRGRRRQSQSGSRSRSRSHGRRNRRRREDEGRRRRRRRSRERRSDSEEE 62
R RSRSR+ RR R ++ + RSRSR+ RR R R RRR R RS RR
Sbjct: 580 RRGRSRSRTPARRRSRSRTPTRRRSRSRTPARRGRSRSRTPARRRSRTRSPVRRRSRSRS 639
Query: 63 RWQRSG-MRSRSPPR--------PKWHSRDGSSQSDSGEEQSRGQWARRRRRARSWSPSS 113
+RSG RSR+P R P R S +SR + RR R+RS +P
Sbjct: 640 PARRSGRSRSRTPARRGRSRSRTPARRGRSRSRTPARRSGRSRSRTPARRGRSRSRTPRR 699
Query: 114 SASSSAS---PGRSQS---PRAAAAALSQQQSLQERLRLREERKQQEELMKAFETPEEKR 167
S S S GRS S R + S ++ + R R R MK +R
Sbjct: 700 GRSRSRSLVRRGRSHSRTPQRRGRSGSSSERKNKSRTSQRRSRSNSSPEMKKSRI-SSRR 758
Query: 168 ARRLAKKEAKERKK 181
+R L+ +K + +
Sbjct: 759 SRSLSSPRSKAKSR 772
Score = 65.9 bits (159), Expect = 1e-10
Identities = 62/183 (33%), Positives = 82/183 (44%), Gaps = 12/183 (6%)
Query: 3 RDTRSRSRSAGRRGRRRQ---SQSGSRSRSRSHGRRNRRRREDEGRRRRRRRSRERRSDS 59
R RSRSR+ RRGR R ++ RSRSR+ RR R R R R R RS RR S
Sbjct: 654 RRGRSRSRTPARRGRSRSRTPARRSGRSRSRTPARRGRSRSRTPRRGRSRSRSLVRRGRS 713
Query: 60 EEERWQRSGMRSRSPPRP-KWHSRDGSSQSDSGEEQSRGQWARRRRRARSWSPSSSASSS 118
QR G S R K + S+S+S E + + + RR R+ S SP S A S
Sbjct: 714 HSRTPQRRGRSGSSSERKNKSRTSQRRSRSNSSPEMKKSRISSRRSRSLS-SPRSKAKSR 772
Query: 119 ASPGRSQSPRAAAAALSQQQSLQERLRLREERKQQEELMKAFETPEEKRARRLAKKEAKE 178
S RS S ++ +Q+S R R Q KA +R+R + K+
Sbjct: 773 LSLRRSLS---GSSPCPKQKSQTPPRRSRSGSSQP----KAKSRTPPRRSRSSSSPPPKQ 825
Query: 179 RKK 181
+ K
Sbjct: 826 KSK 828
Score = 65.1 bits (157), Expect = 2e-10
Identities = 76/260 (29%), Positives = 110/260 (42%), Gaps = 32/260 (12%)
Query: 6 RSRSRSAGRRG--RRRQSQSGSRSRSRSHGRRNRRRREDEGRRRRRRRSRERRSDSEEER 63
R RSRS R G R R +Q RSRS GR + R GR R R +R RS S
Sbjct: 531 RGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRSRSRTPARRGRSRSRTPA 590
Query: 64 WQRSGMRSRSPPRPKWHSRDGSSQSDSGEEQSRGQWARR-------RRRARSWSPS--SS 114
+RS RSR+P R + SR + + G +SR RR RRR+RS SP+ S
Sbjct: 591 RRRS--RSRTPTRRRSRSR---TPARRGRSRSRTPARRRSRTRSPVRRRSRSRSPARRSG 645
Query: 115 ASSSASP---GRSQSPRAAAAALSQQQSLQERLRLREERKQQEELMKAFETPEEKRAR-- 169
S S +P GRS+S A S+ ++ R R TP R+R
Sbjct: 646 RSRSRTPARRGRSRSRTPARRGRSRSRTPARRSGRSRSRTPARRGRSRSRTPRRGRSRSR 705
Query: 170 ---RLAKKEAKERKKREKMGWGEEYMGYTNTDNPFGDNNLLGTFIWNKALEKKGISHLEE 226
R + ++ ++R + G E + T +N + ++K IS
Sbjct: 706 SLVRRGRSHSRTPQRRGRSGSSSERKNKSRTSQRRSRSNS------SPEMKKSRISSRRS 759
Query: 227 KELKERNKRIQEDNRLELQK 246
+ L + R + +RL L++
Sbjct: 760 RSLS--SPRSKAKSRLSLRR 777
Score = 63.2 bits (152), Expect = 9e-10
Identities = 59/196 (30%), Positives = 82/196 (41%), Gaps = 23/196 (11%)
Query: 5 TRSRSRSAGRRGRRRQSQSGS-------RSRSRSHGRRNRRRREDEGRRRR--------R 49
+RSRSR R RR+ +SGS R RSRS R RRRR G R R
Sbjct: 1773 SRSRSRREKTRTTRRRDRSGSSQSTSRRRQRSRSRSRVTRRRRGGSGYHSRSPARQESSR 1832
Query: 50 RRSRERRSDSEEERWQRSGMRSRSPPRPKWHSRDGSSQSDSGEEQSRGQW-ARRRRRARS 108
SR RR S R RSR+ P P SR +S + +SR +RRR R+R+
Sbjct: 1833 TSSRRRRGRSRTPPTSRKRSRSRTSPAPWKRSRSRASPATHRRSRSRTPLISRRRSRSRT 1892
Query: 109 WSPSSSASSSASPGRSQSPRAAAAALSQQQSLQERLRLREERKQQEELMKAFETPEEKRA 168
S S S + + R+ A+ +S+++S + R + TP +R
Sbjct: 1893 SPVSRRRSRSRTSVTRRRSRSRASPVSRRRSRSRTPPVTRRRSRS-------RTPTTRRR 1945
Query: 169 RRLAKKEAKERKKREK 184
R R+ R +
Sbjct: 1946 SRSRTPPVTRRRSRSR 1961
Score = 59.7 bits (143), Expect = 1e-08
Identities = 55/186 (29%), Positives = 82/186 (44%), Gaps = 14/186 (7%)
Query: 6 RSRSRSAGRRGRRRQSQSGSRSRSRSHGRRNRRRREDE--GRRRR-RRRSRERRSD---- 58
RSRS + +RGR R R SRS + RR R + GR R +RR R R
Sbjct: 483 RSRSPATAKRGRSRSRTPTKRGHSRSRSPQWRRSRSAQRWGRSRSPQRRGRSRSPQRPGW 542
Query: 59 SEEERWQRSGMRSRSPPRPKWHSRDGSSQSDSGEEQSRGQWARRRRRARSWSPSSSASSS 118
S QR G RSRS R + HSR +++ +SR + RR R+RS +P+ S S
Sbjct: 543 SRSRNTQRRG-RSRSARRGRSHSRSPATRG-----RSRSRTPARRGRSRSRTPARRRSRS 596
Query: 119 ASPGRSQSPRAAAAALSQQQSLQERLRLREERKQQEELMKAFETPEEKRARRLAKKEAKE 178
+P R +S A + +S + R R + +P + R ++ A+
Sbjct: 597 RTPTRRRSRSRTPARRGRSRS-RTPARRRSRTRSPVRRRSRSRSPARRSGRSRSRTPARR 655
Query: 179 RKKREK 184
+ R +
Sbjct: 656 GRSRSR 661
Score = 57.8 bits (138), Expect = 4e-08
Identities = 55/192 (28%), Positives = 82/192 (42%), Gaps = 20/192 (10%)
Query: 8 RSRSAGRRGR----RRQSQSGSRSRSRSHGRRNRRRREDEG------RRRRRRRSRERRS 57
R+++ RRGR + + SRSRSR R RRR+ G RRR+R RSR R +
Sbjct: 1752 RTKTTSRRGRSPSPKPRGLQRSRSRSRREKTRTTRRRDRSGSSQSTSRRRQRSRSRSRVT 1811
Query: 58 DSEEERWQRSGMRSRSPPRPKWHSRDGSSQSDSGEEQSRGQWARRRRRARSWSPSSSASS 117
R SG SRSP R + S SS+ G ++ +R R S +P + S
Sbjct: 1812 ---RRRRGGSGYHSRSPARQE--SSRTSSRRRRGRSRTPPTSRKRSRSRTSPAPWKRSRS 1866
Query: 118 SASPGRSQSPRAAAAALSQQQSLQ-----ERLRLREERKQQEELMKAFETPEEKRARRLA 172
ASP + R+ +S+++S R R R ++ +P +R R
Sbjct: 1867 RASPATHRRSRSRTPLISRRRSRSRTSPVSRRRSRSRTSVTRRRSRSRASPVSRRRSRSR 1926
Query: 173 KKEAKERKKREK 184
R+ R +
Sbjct: 1927 TPPVTRRRSRSR 1938
Score = 57.8 bits (138), Expect = 4e-08
Identities = 61/196 (31%), Positives = 80/196 (40%), Gaps = 15/196 (7%)
Query: 6 RSRSRSAG---RRGRRRQSQSGSRSRSRSHG---RRNRRRREDEGRRRRRRRS--RERRS 57
RSRSR++ RR R R S + RSRSR+ RR+R R RRR R R+ RRS
Sbjct: 1887 RSRSRTSPVSRRRSRSRTSVTRRRSRSRASPVSRRRSRSRTPPVTRRRSRSRTPTTRRRS 1946
Query: 58 DSEEERWQRSGMRSRSPPRPKWHSRDGSSQSDSGEEQSRGQWARRRRRARSWSPSS--SA 115
S R RSR+PP + SR +S +SR RRR SP + +
Sbjct: 1947 RSRTPPVTRRRSRSRTPPVTRRRSRSRTSPITRRRSRSRTSPVTRRRSRSRTSPVTRRRS 2006
Query: 116 SSSASP-----GRSQSPRAAAAALSQQQSLQERLRLREERKQQEELMKAFETPEEKRARR 170
S SP RS++P A + L R R R TP R +R
Sbjct: 2007 RSRTSPVTRRRSRSRTPPAIRRRSRSRTPLLPRKRSRSRSPLAIRRRSRSRTPRTARGKR 2066
Query: 171 LAKKEAKERKKREKMG 186
+ ++R G
Sbjct: 2067 SLTRSPPAIRRRSASG 2082
Score = 56.2 bits (134), Expect = 1e-07
Identities = 57/184 (30%), Positives = 86/184 (46%), Gaps = 18/184 (9%)
Query: 6 RSRSRSAGRRGRRRQSQSGSR---SRSRSHGRRNRRRREDEGRRRRRRRSRERRSDSEEE 62
RSRSRS RR R +S++ +R SRSR+ RR R R RR R SR R
Sbjct: 634 RSRSRSPARRSGRSRSRTPARRGRSRSRTPARRGRSRSRTPARRSGR--SRSRTPA---- 687
Query: 63 RWQRSGMRSRSPPRPKWHSRD----GSSQSDSGEEQSR-GQWARRRRRARSWSPSSSASS 117
+R RSR+P R + SR G S S + + + R G + R+ ++R+ S ++S
Sbjct: 688 --RRGRSRSRTPRRGRSRSRSLVRRGRSHSRTPQRRGRSGSSSERKNKSRTSQRRSRSNS 745
Query: 118 SASPGRSQ-SPRAAAAALSQQQSLQERLRLREERKQQEELMK-AFETPEEKRARRLAKKE 175
S +S+ S R + + S + + RL LR K +TP + ++ +
Sbjct: 746 SPEMKKSRISSRRSRSLSSPRSKAKSRLSLRRSLSGSSPCPKQKSQTPPRRSRSGSSQPK 805
Query: 176 AKER 179
AK R
Sbjct: 806 AKSR 809
Score = 55.8 bits (133), Expect = 1e-07
Identities = 52/184 (28%), Positives = 80/184 (43%), Gaps = 13/184 (7%)
Query: 7 SRSRSAGRRGRRRQSQSGSRSRSRSHGRRNRRRREDEGRRRRRRRSRERRSDSEEERWQR 66
S++RS GR ++ +S S + SR GR GR R R ++ S S +W+R
Sbjct: 459 SKNRS---HGRAKRDKSHSHTPSRRMGRSRSPATAKRGRSRSRTPTKRGHSRSRSPQWRR 515
Query: 67 SGM-----RSRSPP---RPKWHSRDGSSQSDSGEEQSRGQWARRRRRARSWSPSS-SASS 117
S RSRSP R + R G S+S + + + R + A RR R+ S SP++ S
Sbjct: 516 SRSAQRWGRSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSA-RRGRSHSRSPATRGRSR 574
Query: 118 SASPGRSQSPRAAAAALSQQQSLQERLRLREERKQQEELMKAFETPEEKRARRLAKKEAK 177
S +P R R+ A + +S R R TP +R+R + +
Sbjct: 575 SRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTPARRGRSRSRTPARRRSRTRSPVRRR 634
Query: 178 ERKK 181
R +
Sbjct: 635 SRSR 638
Score = 52.8 bits (125), Expect = 1e-06
Identities = 57/184 (30%), Positives = 76/184 (41%), Gaps = 26/184 (14%)
Query: 2 GRDTRSRSRS---AGRRGRRRQSQSGSRSRSRSHGRRNRRRREDEGRRRRRRRSRERRSD 58
GR R +S S + R GR R + R RSRS R + RR RS +R
Sbjct: 465 GRAKRDKSHSHTPSRRMGRSRSPATAKRGRSRSRTPTKRGHSRSRSPQWRRSRSAQRWGR 524
Query: 59 SEEERWQRSGMRSRSPPRPKWHSRDGSSQSDSGEEQSRGQWARRRRRARSWSPSSSAS-S 117
S QR G RSRSP RP W SR + +RR R+RS S S S
Sbjct: 525 SRSP--QRRG-RSRSPQRPGW---------------SRSRNTQRRGRSRSARRGRSHSRS 566
Query: 118 SASPGRSQSPRAAAAALSQQQSLQERLRLREERKQQEELMKAFETPEEKRARRLAKKEAK 177
A+ GRS+S A S+ ++ R R + TP +R R ++ A+
Sbjct: 567 PATRGRSRSRTPARRGRSRSRTPARR---RSRSRTPTRRRSRSRTP-ARRGRSRSRTPAR 622
Query: 178 ERKK 181
R +
Sbjct: 623 RRSR 626
Score = 52.4 bits (124), Expect = 2e-06
Identities = 48/135 (35%), Positives = 65/135 (48%), Gaps = 14/135 (10%)
Query: 3 RDTRSRSRSAGRRGR------RRQSQSGSRS----RSRSHGRRNRRRREDEGRRRR--RR 50
R RSRSRS RRGR +R+ +SGS S +SR+ RR+R E ++ R R
Sbjct: 698 RRGRSRSRSLVRRGRSHSRTPQRRGRSGSSSERKNKSRTSQRRSRSNSSPEMKKSRISSR 757
Query: 51 RSRERRSDSEEERWQRSGMRSRS--PPRPKWHSRDGSSQSDSGEEQSRGQWARRRRRARS 108
RSR S + + + S RS S P PK S+ +S SG Q + + RR+RS
Sbjct: 758 RSRSLSSPRSKAKSRLSLRRSLSGSSPCPKQKSQTPPRRSRSGSSQPKAKSRTPPRRSRS 817
Query: 109 WSPSSSASSSASPGR 123
S S +P R
Sbjct: 818 SSSPPPKQKSKTPSR 832
Score = 52.0 bits (123), Expect = 2e-06
Identities = 47/145 (32%), Positives = 65/145 (44%), Gaps = 8/145 (5%)
Query: 3 RDTRSRSRSAGRRGRRRQSQSGSRSRSRSHG-----RRNRRRREDEGRRRRRRRSR---E 54
R +RSR+ RR R ++ +R RSRS RR+R R RRR R R+
Sbjct: 1956 RRSRSRTPPVTRRRSRSRTSPITRRRSRSRTSPVTRRRSRSRTSPVTRRRSRSRTSPVTR 2015
Query: 55 RRSDSEEERWQRSGMRSRSPPRPKWHSRDGSSQSDSGEEQSRGQWARRRRRARSWSPSSS 114
RRS S R RSR+P P+ SR S + +SR R +R+ + SP +
Sbjct: 2016 RRSRSRTPPAIRRRSRSRTPLLPRKRSRSRSPLAIRRRSRSRTPRTARGKRSLTRSPPAI 2075
Query: 115 ASSSASPGRSQSPRAAAAALSQQQS 139
SAS S R+A ++ S
Sbjct: 2076 RRRSASGSSSDRSRSATPPATRNHS 2100
Score = 51.2 bits (121), Expect = 3e-06
Identities = 59/217 (27%), Positives = 86/217 (39%), Gaps = 49/217 (22%)
Query: 2 GRDTRSRSRSAGRRGRRRQSQSGSRS---------------------RSRSHGRRNRRRR 40
G D+ ++ R R+S+SGS S +SR+ R +R
Sbjct: 1617 GSDSSPEPKAPAPRALPRRSRSGSSSKGRGPSPEGSSSTESSPEHPPKSRTARRGSRSSP 1676
Query: 41 EDEGRRRRRRRSRERRSDSEEERWQRSGMRSRS-----------PPRPKWHSRDGSSQSD 89
E + + R R R RS E R R RSRS PPR H R S S
Sbjct: 1677 EPKTKSRTPPRRRSSRSSPELTRKARLSRRSRSASSSPETRSRTPPR---HRRSPSVSSP 1733
Query: 90 SGEEQSRGQWARRRRRARSWSPSSSASSSASPGRSQSPRAAAAALSQQQSLQERLRLREE 149
E+SR + RRRR+ S SP + +S GRS SP+ S+ +S +E+ R
Sbjct: 1734 EPAEKSR---SSRRRRSAS-SPRTKTTSRR--GRSPSPKPRGLQRSRSRSRREKTRTTRR 1787
Query: 150 RKQQEELMKAFETPEEKRARRLAKKEAKERKKREKMG 186
R + + +RR + ++ R R + G
Sbjct: 1788 RDRSGS--------SQSTSRRRQRSRSRSRVTRRRRG 1816
Score = 50.8 bits (120), Expect = 5e-06
Identities = 58/211 (27%), Positives = 81/211 (38%), Gaps = 36/211 (17%)
Query: 4 DTRSRSRSAGRRGRR-------RQSQSGSRSRSRSHGR-------------------RNR 37
+TRSR+ RR +S+S R RS S R R+R
Sbjct: 1715 ETRSRTPPRHRRSPSVSSPEPAEKSRSSRRRRSASSPRTKTTSRRGRSPSPKPRGLQRSR 1774
Query: 38 RRREDEGRRRRRRRSRERRSDSEEERWQRSGMRSRSPPRPKWHSRDGSS-QSDSGEEQSR 96
R E R RRR R S S R QRS RSR R R GS S S Q
Sbjct: 1775 SRSRREKTRTTRRRDRSGSSQSTSRRRQRSRSRSRVTRR----RRGGSGYHSRSPARQES 1830
Query: 97 GQWARRRRRARSWSPSSS-----ASSSASPGRSQSPRAAAAALSQQQSLQERLRLREERK 151
+ + RRRR RS +P +S + +S +P + RA+ A + +S + R R
Sbjct: 1831 SRTSSRRRRGRSRTPPTSRKRSRSRTSPAPWKRSRSRASPATHRRSRSRTPLISRRRSRS 1890
Query: 152 QQEELMKAFETPEEKRARRLAKKEAKERKKR 182
+ + + RR ++ A +R
Sbjct: 1891 RTSPVSRRRSRSRTSVTRRRSRSRASPVSRR 1921
Score = 47.8 bits (112), Expect = 4e-05
Identities = 38/172 (22%), Positives = 70/172 (40%), Gaps = 8/172 (4%)
Query: 5 TRSRSRSAGRRGRRRQSQSGSRSRSRSHGRRNRRRREDEGRRRRRRRSRERRSDSEEERW 64
T + + ++ R R+S+S S R R + ++ R + ++R+ RS +S + +
Sbjct: 184 TPKQKKKKKKKDRGRRSESSSPRRERKKSSKKKKHRSESESKKRKHRSPTPKSKRKSKDK 243
Query: 65 QRSGMRSRSPPRPKWHSRDGSSQSDSGEEQSRGQWARRRRRARSWSPSSSASSSASPGRS 124
+R RS +P PK S+ +DS R+RS S ++ ++A GRS
Sbjct: 244 KRKRSRSTTPA-PKSRRAHRSTSADSASSSDTS-------RSRSRSAAAKTHTTALAGRS 295
Query: 125 QSPRAAAAALSQQQSLQERLRLREERKQQEELMKAFETPEEKRARRLAKKEA 176
SP + + + E K +P E + + +K A
Sbjct: 296 PSPASGRRGEGDAPFSEPGTTSTQRPSSPETATKQPSSPYEDKDKDKKEKSA 347
Score = 45.8 bits (107), Expect = 1e-04
Identities = 54/202 (26%), Positives = 79/202 (39%), Gaps = 27/202 (13%)
Query: 3 RDTRSRSRSAGRRGRRRQSQSGSRSRSRSHG-----RRNRRRREDEGRRRRR-------- 49
R SR+ S RRGR R + SR RSRS +R+R R RR R
Sbjct: 1827 RQESSRTSSRRRRGRSRTPPT-SRKRSRSRTSPAPWKRSRSRASPATHRRSRSRTPLISR 1885
Query: 50 RRSRERRSDSEEERWQR----SGMRSRSPPRPKWHSRDGSSQSDSGEEQSRGQWARRRRR 105
RRSR R S R + + RSRS P R S +SR + RRR
Sbjct: 1886 RRSRSRTSPVSRRRSRSRTSVTRRRSRSRASPVSRRRSRSRTPPVTRRRSRSRTPTTRRR 1945
Query: 106 ARSWSPSSSASSSAS---PGRSQSPRAAAAALSQQQSLQERLRLREERKQQEELMKAFET 162
+RS +P + S S P + R+ + +++++S + R + +
Sbjct: 1946 SRSRTPPVTRRRSRSRTPPVTRRRSRSRTSPITRRRSRSRTSPVTRRRSRSR------TS 1999
Query: 163 PEEKRARRLAKKEAKERKKREK 184
P +R R R+ R +
Sbjct: 2000 PVTRRRSRSRTSPVTRRRSRSR 2021
Score = 45.4 bits (106), Expect = 2e-04
Identities = 49/197 (24%), Positives = 73/197 (37%), Gaps = 21/197 (10%)
Query: 7 SRSRSAGRRGRRRQS-------------QSGSRSRS-------RSHGRRNRRRREDEGRR 46
S+SR + RR R S QSGS S R+ RR+R +GR
Sbjct: 1587 SKSRLSPRRSRSGSSPEVKDKPRAAPRAQSGSDSSPEPKAPAPRALPRRSRSGSSSKGRG 1646
Query: 47 RRRRRSRERRSDSEEERWQRSGMR-SRSPPRPKWHSRDGSSQSDSGEEQSRGQWARRRRR 105
S S E R+ R SRS P PK SR + S + AR RR
Sbjct: 1647 PSPEGSSSTESSPEHPPKSRTARRGSRSSPEPKTKSRTPPRRRSSRSSPELTRKARLSRR 1706
Query: 106 ARSWSPSSSASSSASPGRSQSPRAAAAALSQQQSLQERLRLREERKQQEELMKAFETPEE 165
+RS S S S P +SP ++ +++ R R + + + +
Sbjct: 1707 SRSASSSPETRSRTPPRHRRSPSVSSPEPAEKSRSSRRRRSASSPRTKTTSRRGRSPSPK 1766
Query: 166 KRARRLAKKEAKERKKR 182
R + ++ ++ K R
Sbjct: 1767 PRGLQRSRSRSRREKTR 1783
Score = 45.1 bits (105), Expect = 2e-04
Identities = 33/112 (29%), Positives = 52/112 (46%), Gaps = 6/112 (5%)
Query: 22 QSGSRSRSRSHGRRNRRRREDEGRRRRRRRSRERRSDSEEERWQRSGMRSRS----PPRP 77
+ S SRS + ++ +++++D GRR R R S +++ RS S+ P P
Sbjct: 175 RESSSSRSPTPKQKKKKKKKDRGRRSESSSPRRERKKSSKKKKHRSESESKKRKHRSPTP 234
Query: 78 KWHSRDGSSQSDSGEEQSRGQWARRRRRARSWSPSSSASSSASPGRSQSPRA 129
K S+ S +S + RR RS S S++SS S RS+S A
Sbjct: 235 K--SKRKSKDKKRKRSRSTTPAPKSRRAHRSTSADSASSSDTSRSRSRSAAA 284
Score = 45.1 bits (105), Expect = 2e-04
Identities = 50/146 (34%), Positives = 66/146 (45%), Gaps = 16/146 (10%)
Query: 5 TRSRSRS---AGRRGRRRQSQSGSRSRSRSHG-----RRNRRRREDEGRRRRRRRSR--- 53
TR RSRS RR R ++ +R RSRS RR+R R RRR R R+
Sbjct: 1931 TRRRSRSRTPTTRRRSRSRTPPVTRRRSRSRTPPVTRRRSRSRTSPITRRRSRSRTSPVT 1990
Query: 54 ERRSDSEEERWQRSGMRSRSPPRPKWHSRDGSSQSDSGEEQSRGQWARRRRRARSWSPSS 113
RRS S R RSR+ P + SR + + +SR R+R+RS SP +
Sbjct: 1991 RRRSRSRTSPVTRRRSRSRTSPVTRRRSRSRTPPAIRRRSRSRTP-LLPRKRSRSRSPLA 2049
Query: 114 SASSSASPGRSQSPRAAAAALSQQQS 139
S RS++PR A S +S
Sbjct: 2050 IRRRS----RSRTPRTARGKRSLTRS 2071
Score = 44.3 bits (103), Expect = 4e-04
Identities = 53/196 (27%), Positives = 88/196 (44%), Gaps = 19/196 (9%)
Query: 4 DTRSRSRSAGRRGRRRQSQSGSR----SRSRSHGRRNRRRREDEGRRRRRRRSR-ERRSD 58
D+ S++ R R++S+SGS S+SR RR+R E + + R R + SD
Sbjct: 1560 DSSPDSKAKTRTPLRQRSRSGSSPEVDSKSRLSPRRSRSGSSPEVKDKPRAAPRAQSGSD 1619
Query: 59 SEEE------RWQRSGMRSRSPPRPKWHSRDGSSQSDSG-EEQSRGQWARRRRRA----- 106
S E R RS S + + S +GSS ++S E + + ARR R+
Sbjct: 1620 SSPEPKAPAPRALPRRSRSGSSSKGRGPSPEGSSSTESSPEHPPKSRTARRGSRSSPEPK 1679
Query: 107 -RSWSPSSSASSSASPGRSQSPRAAAAALSQQQSLQERLRLREERKQQEELMKAFETPEE 165
+S +P SS +SP ++ R + + S S + R R R ++ + + E E+
Sbjct: 1680 TKSRTPPRRRSSRSSPELTRKARLSRRSRSASSSPETRSR-TPPRHRRSPSVSSPEPAEK 1738
Query: 166 KRARRLAKKEAKERKK 181
R+ R + + R K
Sbjct: 1739 SRSSRRRRSASSPRTK 1754
Score = 41.2 bits (95), Expect = 0.004
Identities = 49/139 (35%), Positives = 60/139 (43%), Gaps = 18/139 (12%)
Query: 3 RDTRSRSRSAGRRGRRRQSQSGSRSRSRSHG-----RRNRRRREDEGRRRRRRRSR---E 54
R +RSR+ RR R ++ +R RSRS RR+R R R+R R RS
Sbjct: 1992 RRSRSRTSPVTRRRSRSRTSPVTRRRSRSRTPPAIRRRSRSRTPLLPRKRSRSRSPLAIR 2051
Query: 55 RRSDSEEERWQRSGMRS--RSPPRPKWHSRDGSSQSDSGEEQSRGQWARRRRRARSWSP- 111
RRS S R R G RS RSPP + S GSS S +S A R P
Sbjct: 2052 RRSRSRTPRTAR-GKRSLTRSPPAIRRRSASGSS---SDRSRSATPPATRNHSGSRTPPV 2107
Query: 112 ---SSSASSSASPGRSQSP 127
SS S + P S +P
Sbjct: 2108 ALNSSRMSCFSRPSMSPTP 2126
Score = 39.3 bits (90), Expect = 0.014
Identities = 41/175 (23%), Positives = 74/175 (42%), Gaps = 18/175 (10%)
Query: 6 RSRSRSAGRRGRRRQSQSGSRSRSRSHGRRNRRRREDEGRRRRRRRSRERRSDSEEERWQ 65
+ +S++ RR R SQ +++SR+ RR+R +++ + SR+ S S
Sbjct: 787 KQKSQTPPRRSRSGSSQP--KAKSRTPPRRSRSSSSPPPKQKSKTPSRQSHSSSSPHPKV 844
Query: 66 RSGMRSRSPPRPKWHSRDGSSQSDSGEEQSRGQWARR------RRRARSWSPSSSASSSA 119
+SG +PP R GS S EQS R +S +PS + S +
Sbjct: 845 KSG----TPP------RQGSITSPQANEQSVTPQRRSCFESSPDPELKSRTPSRHSCSGS 894
Query: 120 SPGRSQSPRAAAAALSQQQSLQERLRLREERKQQEELMKAFETPEEKRARRLAKK 174
SP R +S + S+ S Q +++ +Q+ + +P +R ++
Sbjct: 895 SPPRVKSSTPPRQSPSRSSSPQPKVKAIISPRQRSHSGSSSPSPSRVTSRTTPRR 949
Score = 38.5 bits (88), Expect = 0.023
Identities = 45/178 (25%), Positives = 75/178 (42%), Gaps = 32/178 (17%)
Query: 3 RDTRSRSRSAGRRGRRRQS------QSGSRSRSRSHGRRNRRRREDEGRRRRRRRSRERR 56
+D RS S+ R R++S +S S S+ R H R + + + + ++R+RSR
Sbjct: 194 KDRGRRSESSSPRRERKKSSKKKKHRSESESKKRKH-RSPTPKSKRKSKDKKRKRSRSTT 252
Query: 57 SDSEEERWQRSGMRSRSPPRPKWHSRDGSSQSDSGEEQSRGQWARRRRRA---RSWSPSS 113
+ R RS S D +S SD+ +SR A+ A RS SP+S
Sbjct: 253 PAPKSRRAHRS------------TSADSASSSDTSRSRSRSAAAKTHTTALAGRSPSPAS 300
Query: 114 SASSS-----ASPG--RSQSPRAAAAALSQQQSLQERLRLREERKQQEELMKAFETPE 164
+ PG +Q P + A Q S E +++ K+++ + +PE
Sbjct: 301 GRRGEGDAPFSEPGTTSTQRPSSPETATKQPSSPYED---KDKDKKEKSATRPSPSPE 355
Score = 38.5 bits (88), Expect = 0.023
Identities = 55/213 (25%), Positives = 79/213 (37%), Gaps = 36/213 (16%)
Query: 6 RSRSRSAGRRGRRRQSQSGSRSRSRSHGRRNRRRREDEGRRRRRRRSRE---RRSDSEEE 62
RSRS S+ + + RS S S + R G+R R S+E + S S +E
Sbjct: 1496 RSRSPSSPELNNKCLTPQRERSGSESSVDQKTVARTPLGQRSRSGSSQELDVKPSASPQE 1555
Query: 63 RWQRSG-------------MRSRSPPRPKWHSRDGSS--QSDSGEEQSRGQWARRRRRAR 107
R + RSRS P+ S+ S +S SG R RA+
Sbjct: 1556 RSESDSSPDSKAKTRTPLRQRSRSGSSPEVDSKSRLSPRRSRSGSSPEVKDKPRAAPRAQ 1615
Query: 108 SWSPSS--------------SASSSASPGRSQSPRAAAAALSQQQSLQERLRLREERKQQ 153
S S SS S S S+S GR SP +++ S + + R +
Sbjct: 1616 SGSDSSPEPKAPAPRALPRRSRSGSSSKGRGPSPEGSSSTESSPEHPPKSRTARRGSRSS 1675
Query: 154 EELMKAFETPEEKRARR----LAKKEAKERKKR 182
E TP +R+ R L +K R+ R
Sbjct: 1676 PEPKTKSRTPPRRRSSRSSPELTRKARLSRRSR 1708
Score = 38.1 bits (87), Expect = 0.031
Identities = 46/161 (28%), Positives = 64/161 (39%), Gaps = 25/161 (15%)
Query: 3 RDTRSRSRSAGRRGRR----------RQSQSGSRS-------RSRSHGRRNRRRREDEGR 45
R RS SR+ RRGR R SQ SRS +SR RR+R +
Sbjct: 709 RRGRSHSRTPQRRGRSGSSSERKNKSRTSQRRSRSNSSPEMKKSRISSRRSRSLSSPRSK 768
Query: 46 RRRR---RRSRERRSDSEEERWQRSGMRSR---SPPRPKWHSRDGSSQSDSGEEQSRGQW 99
+ R RRS S +++ Q RSR S P+ K + S+S S +
Sbjct: 769 AKSRLSLRRSLSGSSPCPKQKSQTPPRRSRSGSSQPKAKSRTPPRRSRSSSSPPPKQKSK 828
Query: 100 ARRRRRARSWSPSSSASSSASP--GRSQSPRAAAAALSQQQ 138
R+ S SP S P G SP+A +++ Q+
Sbjct: 829 TPSRQSHSSSSPHPKVKSGTPPRQGSITSPQANEQSVTPQR 869
Score = 34.7 bits (78), Expect = 0.34
Identities = 36/124 (29%), Positives = 53/124 (42%), Gaps = 14/124 (11%)
Query: 17 RRRQSQSGSRSRSRSHGRRNRRRREDEGRRRRRRRSRERRSDSEEERWQRSGMRSRSP-P 75
RR S S S S S S + G S + S + + + R SP P
Sbjct: 2530 RRSSSSSSSSSSSSSSSSSSSSSSSSSGSS-----SSDSEGSSLPVQPEVALKRVPSPTP 2584
Query: 76 RPKWHSRDGSSQSDSGEEQSRGQWARRRRRARSWSPSSSASSSASPGRSQSPRAAAAALS 135
PK R+G + A+R+RR+ S S SSS+SSS+S S S +++++ S
Sbjct: 2585 APKEAVREGRPPEPTP--------AKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2636
Query: 136 QQQS 139
S
Sbjct: 2637 SSSS 2640
Score = 33.9 bits (76), Expect = 0.58
Identities = 38/155 (24%), Positives = 52/155 (33%), Gaps = 8/155 (5%)
Query: 10 RSAGRRGRRRQSQSGSRSRSRSHGRRNRRRREDEGRRRRRRRSRERRSDSEEERWQRSGM 69
RS+ S S S S S S + EG + + + +
Sbjct: 2531 RSSSSSSSSSSSSSSSSSSSSSSSSSGSSSSDSEGSSLPVQPEVALKRVPSPTPAPKEAV 2590
Query: 70 RSRSPPRPKWHSRDGSSQSDSGEEQSRGQWARRRRRARSWSPSSSASSSASPGRSQS--- 126
R PP P R S S S S + + S S SSS+SSS+S S S
Sbjct: 2591 REGRPPEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPS 2650
Query: 127 -----PRAAAAALSQQQSLQERLRLREERKQQEEL 156
P+A S ++ R R RK + L
Sbjct: 2651 PAKPGPQALPKPASPKKPPPGERRSRSPRKPIDSL 2685
Score = 33.5 bits (75), Expect = 0.75
Identities = 39/147 (26%), Positives = 57/147 (38%), Gaps = 20/147 (13%)
Query: 41 EDEGRRRRRRRSRERRSDSEEERWQRSGMRSRSPPR---PKWHSRDGSSQSDSGEEQSRG 97
+++ R S E D+ E+ S SP P+ SR+ SS S S E G
Sbjct: 1372 KEQSTRSSGHSSSELSPDAVEKAGMSSNQSISSPVLDAVPRTPSRERSS-SASSPEMKDG 1430
Query: 98 QWARRRRRARSWS----------PSSSASSSASPGRSQSPRAAAAALS------QQQSLQ 141
RR+RS S PS + S +SPG PR + S + ++L
Sbjct: 1431 LPRTPSRRSRSGSSPGLRDGSGTPSRHSLSGSSPGMKDIPRTPSRGRSECDSSPEPKALP 1490
Query: 142 ERLRLREERKQQEELMKAFETPEEKRA 168
+ R R EL TP+ +R+
Sbjct: 1491 QTPRPRSRSPSSPELNNKCLTPQRERS 1517
Score = 30.8 bits (68), Expect = 4.9
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 80 HSRDGSSQSDSGEEQSRG----QWARRRRRARSWSPSSSASSSASPGRSQSPRAAAAALS 135
HS G + +G +Q Q A+ RR + S S SSS+SSS+S S S + +++
Sbjct: 2503 HSDVGEPPASTGAQQPSALAALQPAKERRSSSSSSSSSSSSSSSSSSSSSSSSSGSSSSD 2562
Query: 136 QQQS 139
+ S
Sbjct: 2563 SEGS 2566
>gi|239747891 PREDICTED: hypothetical protein [Homo sapiens]
Length = 202
Score = 69.7 bits (169), Expect = 9e-12
Identities = 56/196 (28%), Positives = 89/196 (45%), Gaps = 21/196 (10%)
Query: 14 RRGRRRQSQSGS---RSRSRSHGRRNRRRREDEGRRRRRRRSRERRSDSEEERWQRSGMR 70
+R R+R++ G R R R R N+ RE+ R+R R R R+R++D E+ER +R R
Sbjct: 4 QRERKRETDRGKETERERDRQRERENQTERENRHRQRDRHRERDRQTDREKER-ERQKER 62
Query: 71 SRSPPRPKWHSRDGSSQSDSGEEQSRGQWARRRR-----RARSWSPSSSASSSASPGRSQ 125
R R + R+ Q + ++ R + R R R R + + GR +
Sbjct: 63 DRQRQRERETERETERQRERQRQRERKRQTDRERDKDRDRERKRETDRNRERNRKGGRER 122
Query: 126 SPRAA----AAALSQQQSLQERLRLREERKQQEELMKAFETPEEKRARRL--AKKEAKER 179
+ Q+Q +ER R RE +++ + + + EE++ R KKE KE+
Sbjct: 123 DKQTERERDRERERQRQRERERQRQRERKRETDRERQRWAEREERKKERKKERKKERKEK 182
Query: 180 KKRE------KMGWGE 189
KK E K WGE
Sbjct: 183 KKEEKRREDKKRKWGE 198
Score = 57.4 bits (137), Expect = 5e-08
Identities = 52/242 (21%), Positives = 94/242 (38%), Gaps = 60/242 (24%)
Query: 34 RRNRRRREDEGRRRRRRRSRERRSDSEEERWQRSGMRSRSPPRPKWHSRDGSSQSDSGEE 93
+R R+R D G+ R R R+R +++ ER R R R R+ Q+D +E
Sbjct: 4 QRERKRETDRGKETERERDRQRERENQTERENRHRQRDRH--------RERDRQTDREKE 55
Query: 94 QSRGQWARRRRRARSWSPSSSASSSASPGRSQSPRAAAAALSQQQSLQERLRLREERKQQ 153
+ R Q R R+R R ++ + + ER++Q
Sbjct: 56 RER-QKERDRQRQR-----------------------------ERETERETERQRERQRQ 85
Query: 154 EELMKAFETPEEKRARRLAKKEAKERKKREKMGWGEEYMGYTNTDNPFGDNNLLGTFIWN 213
E + + +K R K+E ++R + G E +
Sbjct: 86 RERKRQTDRERDKDRDRERKRETDRNRERNRKGGRER----------------------D 123
Query: 214 KALEKKGISHLEEKELKERNKRIQEDNRLELQKVKQLRLEREREKAMREQELEMLQREKE 273
K E++ E + +ER ++ Q + + E + +Q ERE K R++E + ++EK+
Sbjct: 124 KQTERERDRERERQRQRERERQRQRERKRETDRERQRWAEREERKKERKKERKKERKEKK 183
Query: 274 AE 275
E
Sbjct: 184 KE 185
Score = 50.4 bits (119), Expect = 6e-06
Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
Query: 8 RSRSAGRRGRRRQSQSGSRSRSRSHGRRNRRRREDEGRRRRRRRSRERRSDSEEERWQRS 67
R+R R+G R + + R R R R+ +R RE R+R+R R+R +D E +RW
Sbjct: 110 RNRERNRKGGRERDKQTERERDRERERQRQRERE-----RQRQRERKRETDRERQRWAER 164
Query: 68 GMRSRSPPRPKWHSRDGSSQSDSGEEQSRGQW 99
R + + + R + + E + +W
Sbjct: 165 EERKKERKKERKKERKEKKKEEKRREDKKRKW 196
Score = 49.3 bits (116), Expect = 1e-05
Identities = 33/109 (30%), Positives = 46/109 (42%), Gaps = 12/109 (11%)
Query: 6 RSRSRSAGRRGRRRQSQSGSRSRSRSHGR-------RNRRRREDEGRRRRRRRSRERRSD 58
R R R R R++ + R R R R R R+R D R R R+ RER
Sbjct: 66 RQRERETERETERQRERQRQRERKRQTDRERDKDRDRERKRETDRNRERNRKGGRERDKQ 125
Query: 59 SEEERWQRSGMRSRSPPRPKWHSRDGSSQSDSGEEQSRGQWARRRRRAR 107
+E ER R R R R + R+ ++D + R +WA R R +
Sbjct: 126 TERER-DRERERQRQRERERQRQRERKRETD----RERQRWAEREERKK 169
Score = 43.1 bits (100), Expect = 0.001
Identities = 30/113 (26%), Positives = 48/113 (42%), Gaps = 11/113 (9%)
Query: 8 RSRSAGRRGRRRQSQSGSRSRSRSHGR-RNRRRREDEGRRRRRRRSRERRSDSEEERWQR 66
R R R R++ +R R+R GR R+++ + R R R+R RER E + QR
Sbjct: 94 RERDKDRDRERKRETDRNRERNRKGGRERDKQTERERDRERERQRQRER-----ERQRQR 148
Query: 67 SGMRSRSPPRPKWHSRDGSSQSDSGE-----EQSRGQWARRRRRARSWSPSSS 114
R R +W R+ + E ++ + + RR + R W S
Sbjct: 149 ERKRETDRERQRWAEREERKKERKKERKKERKEKKKEEKRREDKKRKWGEGIS 201
Score = 30.0 bits (66), Expect = 8.3
Identities = 15/63 (23%), Positives = 29/63 (46%)
Query: 223 HLEEKELKERNKRIQEDNRLELQKVKQLRLEREREKAMREQELEMLQREKEAEHFKTWEE 282
H + +ER+++ + E QK + + +RERE + QR++E + E
Sbjct: 37 HRQRDRHRERDRQTDREKERERQKERDRQRQRERETERETERQRERQRQRERKRQTDRER 96
Query: 283 QED 285
+D
Sbjct: 97 DKD 99
>gi|134152708 arginine and glutamate rich 1 [Homo sapiens]
Length = 273
Score = 69.7 bits (169), Expect = 9e-12
Identities = 73/286 (25%), Positives = 131/286 (45%), Gaps = 47/286 (16%)
Query: 6 RSRSRSAGR-------RGRRRQSQSGSRSRSRSHGRRNRRRREDEGRRRRRRRSRERRSD 58
RSRSRS+ R + +++S+S SRSR + R+ + RE + RRR RSR R ++
Sbjct: 3 RSRSRSSSRSKHTKSSKHNKKRSRSRSRSRDKERVRKRSKSRESKRNRRRESRSRSRSTN 62
Query: 59 SEEERWQRSGMRSRSPP-RPKWHSRDGSSQSDSGEEQSRGQWAR-----RRRRARSWSPS 112
+ R +R R+ SPP R R S +S E+Q R + + R+R+ R
Sbjct: 63 TAVSRRERDRERASSPPDRIDIFGRTVSKRSSLDEKQKREEEEKKAEFERQRKIRQQEIE 122
Query: 113 SSASSSASPGRSQS--PRAAAAALSQQQSLQER--LRLREERKQQEELMKAFETPEEKRA 168
+ R + + L +++ ER LR EE K+ E E +++A
Sbjct: 123 EKLIEEETARRVEELVAKRVEEELEKRKDEIEREVLRRVEEAKRIMEKQLLEELERQRQA 182
Query: 169 RRLAKK--EAKERKKREKMGWGEEYMGYTNTDNPFGDNNLLGTFIWNKALEKKGISHLEE 226
A+K E +ER KRE++ + +NN + I+ +
Sbjct: 183 ELAAQKAREEEERAKREEL------------ERILEENN-------------RKIAEAQA 217
Query: 227 KELKERNKRIQEDNRLELQKVKQLRLEREREKAMREQELEMLQREK 272
K +E+ + ++E ++ +++K LE+ER++ +E++ +L + K
Sbjct: 218 KLAEEQLRIVEEQRKIHEERMK---LEQERQRQQKEEQKIILGKGK 260
Score = 60.8 bits (146), Expect = 4e-09
Identities = 67/277 (24%), Positives = 111/277 (40%), Gaps = 35/277 (12%)
Query: 44 GRRRRRRRSRERRSDSEEERWQRSGMRSRSPPRPKWHSRDGSSQSDSGEEQSRGQWARRR 103
GR R R SR + + S + +RS RSRS + + R S +S +R
Sbjct: 2 GRSRSRSSSRSKHTKSSKHNKKRSRSRSRSRDKERVRKRSKSRES------------KRN 49
Query: 104 RRARSWSPSSSASSSASPGRSQSPRAAA---------AALSQQQSLQERLRLREERK--- 151
RR S S S S +++ S RA++ +S++ SL E+ + EE K
Sbjct: 50 RRRESRSRSRSTNTAVSRRERDRERASSPPDRIDIFGRTVSKRSSLDEKQKREEEEKKAE 109
Query: 152 --------QQEELMKAFETPEEKRARRLAKKEAKERKKREKMGWGEEYMGYTNTDNPFGD 203
QQE K E +R L K +E ++ K E + +
Sbjct: 110 FERQRKIRQQEIEEKLIEEETARRVEELVAKRVEEELEKRKDEIEREVLRRVEEAKRIME 169
Query: 204 NNLLGTFIWNKALEKKGISHLEEKELKERN--KRIQEDNRLELQKVKQLRLEREREKAMR 261
LL + E EE+E +R +RI E+N ++ + Q +L E+ + +
Sbjct: 170 KQLLEELERQRQAELAAQKAREEEERAKREELERILEENNRKIAEA-QAKLAEEQLRIVE 228
Query: 262 EQELEMLQREKEAEHFKTWEEQEDNFHLQQAKLRSKI 298
EQ +R K + + +++E L + K R K+
Sbjct: 229 EQRKIHEERMKLEQERQRQQKEEQKIILGKGKSRPKL 265
Score = 36.2 bits (82), Expect = 0.12
Identities = 54/221 (24%), Positives = 88/221 (39%), Gaps = 41/221 (18%)
Query: 3 RDTRSRSRSAG----RRGRRRQSQSGSRSRSRSHGR---------RNRRRREDEGRRRRR 49
R++RSRSRS RR R R+ S R GR ++R E+E +
Sbjct: 52 RESRSRSRSTNTAVSRRERDRERASSPPDRIDIFGRTVSKRSSLDEKQKREEEEKKAEFE 111
Query: 50 RRSRERRSDSEEERWQRSGMRSRSPPRPKWHSRDGSSQSDSGEEQ--SRGQWARR---RR 104
R+ + R+ + EE+ + R K + + D E + R + A+R ++
Sbjct: 112 RQRKIRQQEIEEKLIEEETARRVEELVAKRVEEELEKRKDEIEREVLRRVEEAKRIMEKQ 171
Query: 105 RARSWSPSSSASSSASPGRSQSPRAAAAAL-------------SQQQSLQERLRL-REER 150
A +A R + RA L +Q + +E+LR+ E+R
Sbjct: 172 LLEELERQRQAELAAQKAREEEERAKREELERILEENNRKIAEAQAKLAEEQLRIVEEQR 231
Query: 151 KQQEELMKAFETPEEKRARRLAKKEAK----ERKKREKMGW 187
K EE MK E+ +R K+E K + K R K+ +
Sbjct: 232 KIHEERMKL-----EQERQRQQKEEQKIILGKGKSRPKLSF 267
>gi|239756568 PREDICTED: similar to BCL2-associated transcription
factor 1 [Homo sapiens]
Length = 869
Score = 69.3 bits (168), Expect = 1e-11
Identities = 71/205 (34%), Positives = 88/205 (42%), Gaps = 36/205 (17%)
Query: 6 RSRSRSAGRRGRRRQSQSGSRSRSRSHGR----RNRRRREDEGRRRRRRRSRERRSDSEE 61
RS SRS R + R SQS SRSRSRSH R R+R R R R R SR+ R D
Sbjct: 3 RSNSRSHSSRSKSR-SQSSSRSRSRSHSRKKRYRSRSRTYSRSRSRDRMYSRDYRRDYRN 61
Query: 62 ERWQR----------------SGMRSRSPPRPKW---HSRD---GSSQSDSGEEQSRGQW 99
R R G R RP W HSR G S+S S + +S
Sbjct: 62 NRAMRRPYGYRGRGRGYYQGGGGRYHRGGYRPVWNRRHSRSPRRGRSRSRSPKRRSVSSQ 121
Query: 100 ARRRRRARSW----SPSSSASSSASPGRSQSPRAAAAALSQQQSLQERLRLREE----RK 151
R R RS+ SP SS+S S+SP S+SP + ++Q+ + L+EE K
Sbjct: 122 RSRSRSRRSYRSSRSPRSSSSRSSSP-YSKSPVSKRRGSQEKQTKKAEGELQEESPLKSK 180
Query: 152 QQEELMKAFETPEEKRARRLAKKEA 176
QEE FE + K A
Sbjct: 181 SQEEPKDTFEHDSSESIDEFNKSSA 205
Score = 37.7 bits (86), Expect = 0.040
Identities = 34/96 (35%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 3 RDTRSRSRSAGRRGRRRQSQSGSRSRSRSHGRRNRRRREDEGRRR---------RRRRSR 53
R RSRSRS RR S SRSRSR R +R R R +RR S+
Sbjct: 104 RRGRSRSRSPKRRS---VSSQRSRSRSRRSYRSSRSPRSSSSRSSSPYSKSPVSKRRGSQ 160
Query: 54 ERRSDSEE-ERWQRSGMRSRSPPRPKWHSRDGSSQS 88
E+++ E E + S ++S+S PK SS+S
Sbjct: 161 EKQTKKAEGELQEESPLKSKSQEEPKDTFEHDSSES 196
Score = 30.0 bits (66), Expect = 8.3
Identities = 38/163 (23%), Positives = 65/163 (39%), Gaps = 24/163 (14%)
Query: 7 SRSRSAGRRGRRRQSQSGSRSRSRSHGRRNRRRREDE-GRRRRRRRSRERRSDSEEERWQ 65
+R +S R S S R +R G + E++ G ++ R S + R D + R +
Sbjct: 642 TRQKSPEIHRRIDISPSTLRKDTRLAGEERVFKEENQKGDKKLRCDSADLRHDIDHRRKE 701
Query: 66 RSGMRSRSPPRPKWHSRDGSSQSDSGEEQSRGQ-WARRRRRARSWSPSSSASSSASPGRS 124
RS + R + SR Q + ++ + + + R S S+SSSASP
Sbjct: 702 RS--KERGDSKGSRESRGSRKQEKTPKDYKEYKSYKDDSKHKREQDHSLSSSSSASPSSP 759
Query: 125 QSPRAAAAALSQQQSLQERLRLREERKQQEELMKAFETPEEKR 167
S REE++ ++E + F+T E +
Sbjct: 760 SS--------------------REEKESKKEREEEFKTHHEMK 782
>gi|224548936 hypothetical protein LOC100170229 [Homo sapiens]
Length = 715
Score = 68.6 bits (166), Expect = 2e-11
Identities = 83/348 (23%), Positives = 135/348 (38%), Gaps = 31/348 (8%)
Query: 3 RDTRSRSRSAGRRGRRRQSQSGSRSRSRSHGR-RNRRRREDEGRRRRRRRSRERRSDSEE 61
RD R S GR SQSGS ++ R H R R+ + D R R ++R+ RS S
Sbjct: 375 RDHRGSSSPRKESGR---SQSGSPNKQRDHSRSRSPNKARDRSRSRSPYKARD-RSRSRS 430
Query: 62 ERWQRSGMRSRSPPRPKWHSRDGSSQSDSGEEQSRG-QWARRRRRARSWSPSSSASSSAS 120
R RSRSP + + SR S +SR AR R R+RS S S S
Sbjct: 431 PNKARDCSRSRSPYKARDRSRSRSPNKARDHSRSRSPNKARDRSRSRSPSKERDHSQLGS 490
Query: 121 PGRSQSPRAAAAALSQQQSLQERLRLREERKQQEELMKAFETPEEKRARRLAKKEAKERK 180
P + + R + + ++Q Q R +E ++ +P ++R RR ++ KER
Sbjct: 491 PSKERDHRRSRSPSKERQCRQSRSSSKERDHRRS------RSPSKERQRRQSRSPNKERD 544
Query: 181 KREKMGWGEEYMGYTNTDNPFGDNNLLGTFIWNKALEKKGISHLEEKELKE-RNKRIQED 239
+ + EE + + +P + + ++ S +E+E ++ R+ + D
Sbjct: 545 RSQSRSPSEE-REHRQSRSPSKERD-----------RRRWRSPSKERERRQSRSSSEERD 592
Query: 240 NRLELQKVKQLRLEREREKAMREQELEMLQREKEAEHFKTWEEQEDNFHLQQAKLRSKIR 299
+ KQ R R + + KE H ++ +++ Q RS
Sbjct: 593 HSRSRSPNKQSGYSRPRASSKEKAHSRSRTPSKEGNHSQSRTSSKESDPSQSTVPRSP-- 650
Query: 300 IRDGRAKPIDLLAKYISAEDDDLAVEMHEPYTFLNGLTVADMEDLLED 347
D + P +S H P TF +G +D D
Sbjct: 651 --DWKRSP--TRTSSLSQNRTPSKTSSHSPSTFPSGGQTLSQDDSQAD 694
Score = 67.8 bits (164), Expect = 4e-11
Identities = 70/279 (25%), Positives = 120/279 (43%), Gaps = 21/279 (7%)
Query: 6 RSRSRSA--GRRGRRRQSQSGSRSRSRSHGRRNRRRREDEGRR---RRRRRSRERRSDSE 60
RSR+R + GR QS+S S+ +S++ R RR R R + R S R S E
Sbjct: 315 RSRTRKGILSQMGRHSQSRSHSKGKSQNQSRTPRRGRSHNWSRNPSKERSHSHSRSSSKE 374
Query: 61 EE-------RWQRSGMRSRSPPRPKWHSRDGSSQSDSGEEQSRGQW-ARRRRRARSWSPS 112
+ R + +S SP + + HSR S +SR + AR R R+RS + +
Sbjct: 375 RDHRGSSSPRKESGRSQSGSPNKQRDHSRSRSPNKARDRSRSRSPYKARDRSRSRSPNKA 434
Query: 113 SSASSSASP------GRSQSPRAAAAALSQQQSLQERLRLREERKQQEELMKAFETPEEK 166
S S SP RS+SP A + + R R R +E +P ++
Sbjct: 435 RDCSRSRSPYKARDRSRSRSPNKARDHSRSRSPNKARDRSRSRSPSKERDHSQLGSPSKE 494
Query: 167 RARRLAKKEAKERKKREKMGWGEEYMGYTNTDNPFGDNNLLGTFIWNKALEK-KGISHLE 225
R R ++ +KER+ R+ +E + + +P + + NK ++ + S E
Sbjct: 495 RDHRRSRSPSKERQCRQSRSSSKE-RDHRRSRSPSKERQRRQSRSPNKERDRSQSRSPSE 553
Query: 226 EKELKERNKRIQEDNRLELQKVKQLRLEREREKAMREQE 264
E+E ++ +E +R + + R R+ + E++
Sbjct: 554 EREHRQSRSPSKERDRRRWRSPSKERERRQSRSSSEERD 592
Score = 58.5 bits (140), Expect = 2e-08
Identities = 74/322 (22%), Positives = 135/322 (41%), Gaps = 42/322 (13%)
Query: 5 TRSRSRSAGRRGRRRQSQSGSR----SRSRSHG-RRNRRRREDEGR--------RRRRRR 51
TRSR +S + R+S+SGS+ SR RSH +RN R R R + R
Sbjct: 274 TRSRPQSHSQSRSPRRSRSGSQKRTHSRVRSHSWKRNHSRARSRTRKGILSQMGRHSQSR 333
Query: 52 SRERRSDSEEERWQRSGMR---SRSPPRPKWHSRDGSS------------QSDSGEEQSR 96
S + + R R G SR+P + + HS SS + +SG QS
Sbjct: 334 SHSKGKSQNQSRTPRRGRSHNWSRNPSKERSHSHSRSSSKERDHRGSSSPRKESGRSQS- 392
Query: 97 GQWARRRRRARSWSPSSS--ASSSASP------GRSQSPRAAAAALSQQQSLQERLRLRE 148
G ++R +RS SP+ + S S SP RS+SP A + + R R R
Sbjct: 393 GSPNKQRDHSRSRSPNKARDRSRSRSPYKARDRSRSRSPNKARDCSRSRSPYKARDRSRS 452
Query: 149 ERKQQEELMKAFETPEEKRARRLAKKEAKERKKREKMGWGEEYMGYTNTDNPFGDNNLLG 208
+ +P + R R ++ +KER ++G + + + +P +
Sbjct: 453 RSPNKARDHSRSRSPNKARDRSRSRSPSKER-DHSQLGSPSKERDHRRSRSPSKERQCRQ 511
Query: 209 TFIWNKALE-KKGISHLEEKELKERNKRIQEDNRLELQKVKQLRLEREREKAMREQELEM 267
+ +K + ++ S +E++ ++ +E +R + + + R R+ +E++
Sbjct: 512 SRSSSKERDHRRSRSPSKERQRRQSRSPNKERDRSQSRSPSEEREHRQSRSPSKERDRRR 571
Query: 268 LQ---REKEAEHFKTWEEQEDN 286
+ +E+E ++ E+ D+
Sbjct: 572 WRSPSKERERRQSRSSSEERDH 593
Score = 50.4 bits (119), Expect = 6e-06
Identities = 49/185 (26%), Positives = 76/185 (41%), Gaps = 17/185 (9%)
Query: 5 TRSRSRSAGRRGRRRQS--QSGSRSRSRSHGRRNRRRREDEGRRRRRRRSRERRSDSEEE 62
+R +S S R +S Q+ +RSR +SH + RR G ++R SR R
Sbjct: 252 SREKSYSPTEMSSRVKSYNQASTRSRPQSHSQSRSPRRSRSG-SQKRTHSRVR-----SH 305
Query: 63 RWQRSGMRSRSPPRP------KWHSRDGSSQSDSGEEQSRGQWARRRRRARSWSPSSSAS 116
W+R+ R+RS R HS+ S + QSR RR R+ +WS + S
Sbjct: 306 SWKRNHSRARSRTRKGILSQMGRHSQSRSHSKGKSQNQSR---TPRRGRSHNWSRNPSKE 362
Query: 117 SSASPGRSQSPRAAAAALSQQQSLQERLRLREERKQQEELMKAFETPEEKRARRLAKKEA 176
S S RS S S + R + KQ++ R+R + +A
Sbjct: 363 RSHSHSRSSSKERDHRGSSSPRKESGRSQSGSPNKQRDHSRSRSPNKARDRSRSRSPYKA 422
Query: 177 KERKK 181
++R +
Sbjct: 423 RDRSR 427
Score = 33.1 bits (74), Expect = 0.98
Identities = 37/125 (29%), Positives = 54/125 (43%), Gaps = 17/125 (13%)
Query: 3 RDTRSRSRSAGRRGRRRQSQSGSRSRSRSHGRRNRRRREDEGRRRRRRRSRERRSDSEEE 62
R T SR R+ GRRG SRS RS R + R R SR R S
Sbjct: 115 RGTHSRGRTPGRRG--------SRSSKRSPSRASTPGRIRTHGARPGMASRVRTPTS--- 163
Query: 63 RWQRSGMRSRSPPRPKWHSRDGSSQSDSGEEQSRGQWARRRRRARSWSPSSSASSSASPG 122
Q+ G R +S RP+ +R+ +SDS + ++ + + R SS + + S
Sbjct: 164 --QQKGSRGKSYGRPRTSNRE---RSDS-QPRNLSKKSYRPPGGSGIGRSSELAVTPSTA 217
Query: 123 RSQSP 127
+ Q+P
Sbjct: 218 KCQTP 222
Score = 32.7 bits (73), Expect = 1.3
Identities = 42/146 (28%), Positives = 58/146 (39%), Gaps = 27/146 (18%)
Query: 5 TRSRSRSAGRRGRR-----RQSQSGSRSRSRSHGRRNRRRREDEGRRRRRRRSRERRSDS 59
+RSR RS R R R S++ S R H RR R GR RR SR +
Sbjct: 80 SRSRVRSKARTPSRVSTDTRTSKASKASDVRCHQRRGTHSR---GRTPGRRGSRSSK--- 133
Query: 60 EEERWQRSGMRSRSPPRPKWHS---------RDGSSQSDSGEEQSRGQ-WARRRRRARSW 109
RS R+ +P R + H R +SQ +S G+ R R+ S
Sbjct: 134 ------RSPSRASTPGRIRTHGARPGMASRVRTPTSQQKGSRGKSYGRPRTSNRERSDSQ 187
Query: 110 SPSSSASSSASPGRSQSPRAAAAALS 135
+ S S PG S R++ A++
Sbjct: 188 PRNLSKKSYRPPGGSGIGRSSELAVT 213
>gi|133922600 splicing factor, arginine/serine-rich 16 [Homo
sapiens]
Length = 674
Score = 68.6 bits (166), Expect = 2e-11
Identities = 73/241 (30%), Positives = 102/241 (42%), Gaps = 44/241 (18%)
Query: 2 GRDTRSRSRSAGRRGRRRQSQSGSRSRSRSH-------GRRNRRRREDEGRRRRRRRSRE 54
GR RSRSRS R R + S SRSR R H G R R G RRRSR
Sbjct: 412 GRHARSRSRSWSRSRSRSRRYSRSRSRGRRHSGGGSRDGHRYSRSPARRGGYGPRRRSRS 471
Query: 55 RRSDSEEERWQRSGMR--SRSPPRPKWH---SRDGSSQSDSGEEQSRGQWARRRRRARSW 109
R + R G+R S S R W SR S S Q +R R R+RS
Sbjct: 472 RSHSGDRYRRGGRGLRHHSSSRSRSSWSLSPSRSRSLTRSRSHSPSPSQ-SRSRSRSRSQ 530
Query: 110 SPSSS---------ASSSA--------SPGRSQSPRAAAAALSQQQSLQERL------RL 146
SPS S A+S A P + AA L+ Q+ L+ R+ +
Sbjct: 531 SPSPSPAREKLTRPAASPAVGEKLKKTEPAAGKETGAAKPKLTPQEKLKLRMQKALNRQF 590
Query: 147 REERKQQEELMKAFETPEEKR-------ARRLAKKEAKERKKREKMGWGEEYMGYTNTDN 199
+ ++K +E M E ++R AR++ KE +ER+++E+ W +Y + + +
Sbjct: 591 KADKKAAQEKMIQQEHERQEREDELRAMARKIRMKE-RERREKEREEWERQYSRQSRSPS 649
Query: 200 P 200
P
Sbjct: 650 P 650
Score = 57.8 bits (138), Expect = 4e-08
Identities = 83/308 (26%), Positives = 113/308 (36%), Gaps = 70/308 (22%)
Query: 10 RSAGRRGRRRQSQSGSRSRSRSHGRRNRRRREDEGRRRRRRRSRERRSDSEEERWQRSGM 69
R+A R RR S S S S SR+ R+ R RR R + S W RS
Sbjct: 369 RNASAR-RRSSSSSSSSSASRTSSSRSSSRSSSRSRRGGGYYRSGRHARSRSRSWSRSRS 427
Query: 70 R----SRSPPRPKWHSRDGS-----------------------SQSDSGEEQSRGQWARR 102
R SRS R + HS GS S+S SG+ RG R
Sbjct: 428 RSRRYSRSRSRGRRHSGGGSRDGHRYSRSPARRGGYGPRRRSRSRSHSGDRYRRGGRGLR 487
Query: 103 R----RRARSWSPSSSASSSASPGRSQSPRAAAAALSQQQSLQERLRLREERKQQEELMK 158
R SWS S S S S + RS SP + Q R R R R Q
Sbjct: 488 HHSSSRSRSSWSLSPSRSRSLTRSRSHSPSPS----------QSRSRSR-SRSQSPSPSP 536
Query: 159 AFETPEEKRARRLAKKEAKERKKREKMGWGEEYMGYTNTDNPFGDNNLLGTFIWNKALEK 218
A EK R A E+ K+ + G+E T P K +
Sbjct: 537 A----REKLTRPAASPAVGEKLKKTEPAAGKE----TGAAKP-------------KLTPQ 575
Query: 219 KGISHLEEKELKERNKRIQEDNRLELQKVKQL---RLEREREKAMREQELEMLQREKEAE 275
+ + +K L N++ + D + +K+ Q R ERE E +++ M +RE+ +
Sbjct: 576 EKLKLRMQKAL---NRQFKADKKAAQEKMIQQEHERQEREDELRAMARKIRMKERERREK 632
Query: 276 HFKTWEEQ 283
+ WE Q
Sbjct: 633 EREEWERQ 640
Score = 33.5 bits (75), Expect = 0.75
Identities = 42/153 (27%), Positives = 59/153 (38%), Gaps = 34/153 (22%)
Query: 3 RDTRSRSRSAGRRGRRRQSQSGSRSRSRSHGRRNRRRREDEGRRRRRRRS----RERR-- 56
R R R RGR+ S +R S ++ R E R R RS RE +
Sbjct: 268 RRQRREFREKRLRGRKISPPSYARRDSPTYDPYKRSPSESSSESRSRSRSPTPGREEKIT 327
Query: 57 -----SDSEEERWQR------SGMRSRSPPRPKWHSRDGSSQSDSGEEQSRGQWARRRRR 105
S+EE SG+ + PP P G R ARRR
Sbjct: 328 FITSFGGSDEEAAAAAAAAAASGVTTGKPPAP---------PQPGGPAPGRNASARRR-- 376
Query: 106 ARSWSPSSSASSSASPGRSQSPRAAAAALSQQQ 138
SSS+SSS+S R+ S R+++ + S+ +
Sbjct: 377 ------SSSSSSSSSASRTSSSRSSSRSSSRSR 403
Score = 30.0 bits (66), Expect = 8.3
Identities = 28/110 (25%), Positives = 45/110 (40%), Gaps = 8/110 (7%)
Query: 26 RSRSRSHGRRNRRRREDEGRRRRRRRSRERRSDSEEERWQRSGMRSRSPPRPKWHSRDGS 85
+ + + ++ + E+E RRSR +R + E+R +R R P + RD
Sbjct: 241 KDKEEAEAIKHAKALEEEKAMYSGRRSRRQRREFREKR-----LRGRKISPPSYARRDSP 295
Query: 86 SQSDSGEEQSRGQWARRRRRARSWSPSSSASSS--ASPGRSQSPRAAAAA 133
+ S + R R+RS +P + S G S AAAAA
Sbjct: 296 TYDPYKRSPSESS-SESRSRSRSPTPGREEKITFITSFGGSDEEAAAAAA 344
>gi|116089325 splicing factor, arginine/serine-rich 12 isoform a
[Homo sapiens]
Length = 624
Score = 67.4 bits (163), Expect = 5e-11
Identities = 66/286 (23%), Positives = 123/286 (43%), Gaps = 9/286 (3%)
Query: 6 RSRSRSAGRRGRRRQSQSGSRSRSRSHGRRNRRRREDEGRRRRRRRSRER-RSDSEEERW 64
+S R GR R ++S SRS S+SH RR R + + R R RSR++ R S+
Sbjct: 299 KSNERKGGRS--RSHTRSKSRSSSKSHSRRKRSQSKHRSRSHNRSRSRQKDRRRSKSPHK 356
Query: 65 QRSGMRSRSPPRPKWHSRDGSSQSDSGEEQSRGQWARRRRRARSWSPSSSASSSASPGRS 124
+RS R R R + HSRD + D+ E+ + + + R + G++
Sbjct: 357 KRSKSRERRKSRSRSHSRD--KRKDTREKIKEKERVKEKDREKEREREKEREKEKERGKN 414
Query: 125 QSPRAAAAALSQQQSLQERLRLRE-ERKQQEELMKAFETPEEKRARRLAKKEAKERKKRE 183
+ ++ ++R R RE E ++ + K E +EK + KE E++K++
Sbjct: 415 KDRDKEREKDREKDKEKDREREREKEHEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKKD 474
Query: 184 KMGWG--EEYMGYTNTDNPFGDNNLLGTFIWNKALE-KKGISHLEEKELKERNKRIQEDN 240
K Y + + + + +++ K I + R++ ++
Sbjct: 475 KKSRTPPRSYNASRRSRSSSRERRRRRSRSSSRSPRTSKTIKRKSSRSPSPRSRNKKDKK 534
Query: 241 RLELQKVKQLRLEREREKAMREQELEMLQREKEAEHFKTWEEQEDN 286
R + + R ERER +MR+ + +EK ++ + +E+E N
Sbjct: 535 REKERDHISERRERERSTSMRKSSNDRDGKEKLEKNSTSLKEKEHN 580
Score = 58.2 bits (139), Expect = 3e-08
Identities = 44/189 (23%), Positives = 83/189 (43%), Gaps = 21/189 (11%)
Query: 6 RSRSRSAGRRGRRRQSQSGSRSRSRSHGRRNRRRREDEGRRRRRRRSRERRSDSEEERWQ 65
R + + G+ R + + R + + R R +E E + R + +E+ D E+ER +
Sbjct: 405 REKEKERGKNKDRDKEREKDREKDKEKDREREREKEHE---KDRDKEKEKEQDKEKEREK 461
Query: 66 ----------RSGMRSRSPPRPKWHSRDGSSQSDSGEEQSRGQWARRRRRARSWSPSSSA 115
+ +SR+PPR S + S +S S + R RRR R+ S SP +S
Sbjct: 462 DRSKEIDEKRKKDKKSRTPPR----SYNASRRSRSSSRERR----RRRSRSSSRSPRTSK 513
Query: 116 SSSASPGRSQSPRAAAAALSQQQSLQERLRLREERKQQEELMKAFETPEEKRARRLAKKE 175
+ RS SPR+ +++ ++ + R ER++ + K+ + K
Sbjct: 514 TIKRKSSRSPSPRSRNKKDKKREKERDHISERRERERSTSMRKSSNDRDGKEKLEKNSTS 573
Query: 176 AKERKKREK 184
KE++ ++
Sbjct: 574 LKEKEHNKE 582
Score = 51.2 bits (121), Expect = 3e-06
Identities = 52/195 (26%), Positives = 83/195 (42%), Gaps = 27/195 (13%)
Query: 92 EEQSRGQWARRRRRARSWSPSSSASSSASPGRSQSPRAAAAALSQQQSLQERLRLREERK 151
E +S R+ R+RS + S S SSS S R + ++ + S +S R R ++ R+
Sbjct: 294 EPESGKSNERKGGRSRSHTRSKSRSSSKSHSRRKRSQSKHRSRSHNRS---RSRQKDRRR 350
Query: 152 QQEELMKAFETPEEKRARRLAKKEAKERKKREKMGWGEEYMGYTNTDNPFGDNNLLGTFI 211
+ K ++ E +++R + K + REK+ E +
Sbjct: 351 SKSPHKKRSKSRERRKSRSRSHSRDKRKDTREKIKEKER--------------------V 390
Query: 212 WNKALEKKGISHLEEKELKERNKRIQEDNRLELQKVKQLRLEREREKAMREQELEM-LQR 270
K EK+ E ++ KER K D E + K +RERE RE+E E +
Sbjct: 391 KEKDREKEREREKEREKEKERGKNKDRDKEREKDREKDKEKDRERE---REKEHEKDRDK 447
Query: 271 EKEAEHFKTWEEQED 285
EKE E K E ++D
Sbjct: 448 EKEKEQDKEKEREKD 462
Score = 35.8 bits (81), Expect = 0.15
Identities = 32/106 (30%), Positives = 50/106 (47%), Gaps = 19/106 (17%)
Query: 8 RSRSAGRRGRRRQSQSGSRS------------RSRSHGRRNRR--RREDEG-----RRRR 48
RSRS+ R RRR+S+S SRS RS S RN++ +RE E RR R
Sbjct: 489 RSRSSSRERRRRRSRSSSRSPRTSKTIKRKSSRSPSPRSRNKKDKKREKERDHISERRER 548
Query: 49 RRRSRERRSDSEEERWQRSGMRSRSPPRPKWHSRDGSSQSDSGEEQ 94
R + R+S ++ + ++ S S + + SS S +++
Sbjct: 549 ERSTSMRKSSNDRDGKEKLEKNSTSLKEKEHNKEPDSSVSKEVDDK 594
>gi|21040255 splicing factor, arginine/serine-rich 12 isoform b
[Homo sapiens]
Length = 508
Score = 67.4 bits (163), Expect = 5e-11
Identities = 66/286 (23%), Positives = 123/286 (43%), Gaps = 9/286 (3%)
Query: 6 RSRSRSAGRRGRRRQSQSGSRSRSRSHGRRNRRRREDEGRRRRRRRSRER-RSDSEEERW 64
+S R GR R ++S SRS S+SH RR R + + R R RSR++ R S+
Sbjct: 183 KSNERKGGRS--RSHTRSKSRSSSKSHSRRKRSQSKHRSRSHNRSRSRQKDRRRSKSPHK 240
Query: 65 QRSGMRSRSPPRPKWHSRDGSSQSDSGEEQSRGQWARRRRRARSWSPSSSASSSASPGRS 124
+RS R R R + HSRD + D+ E+ + + + R + G++
Sbjct: 241 KRSKSRERRKSRSRSHSRD--KRKDTREKIKEKERVKEKDREKEREREKEREKEKERGKN 298
Query: 125 QSPRAAAAALSQQQSLQERLRLRE-ERKQQEELMKAFETPEEKRARRLAKKEAKERKKRE 183
+ ++ ++R R RE E ++ + K E +EK + KE E++K++
Sbjct: 299 KDRDKEREKDREKDKEKDREREREKEHEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKKD 358
Query: 184 KMGWG--EEYMGYTNTDNPFGDNNLLGTFIWNKALE-KKGISHLEEKELKERNKRIQEDN 240
K Y + + + + +++ K I + R++ ++
Sbjct: 359 KKSRTPPRSYNASRRSRSSSRERRRRRSRSSSRSPRTSKTIKRKSSRSPSPRSRNKKDKK 418
Query: 241 RLELQKVKQLRLEREREKAMREQELEMLQREKEAEHFKTWEEQEDN 286
R + + R ERER +MR+ + +EK ++ + +E+E N
Sbjct: 419 REKERDHISERRERERSTSMRKSSNDRDGKEKLEKNSTSLKEKEHN 464
Score = 58.2 bits (139), Expect = 3e-08
Identities = 44/189 (23%), Positives = 83/189 (43%), Gaps = 21/189 (11%)
Query: 6 RSRSRSAGRRGRRRQSQSGSRSRSRSHGRRNRRRREDEGRRRRRRRSRERRSDSEEERWQ 65
R + + G+ R + + R + + R R +E E + R + +E+ D E+ER +
Sbjct: 289 REKEKERGKNKDRDKEREKDREKDKEKDREREREKEHE---KDRDKEKEKEQDKEKEREK 345
Query: 66 ----------RSGMRSRSPPRPKWHSRDGSSQSDSGEEQSRGQWARRRRRARSWSPSSSA 115
+ +SR+PPR S + S +S S + R RRR R+ S SP +S
Sbjct: 346 DRSKEIDEKRKKDKKSRTPPR----SYNASRRSRSSSRERR----RRRSRSSSRSPRTSK 397
Query: 116 SSSASPGRSQSPRAAAAALSQQQSLQERLRLREERKQQEELMKAFETPEEKRARRLAKKE 175
+ RS SPR+ +++ ++ + R ER++ + K+ + K
Sbjct: 398 TIKRKSSRSPSPRSRNKKDKKREKERDHISERRERERSTSMRKSSNDRDGKEKLEKNSTS 457
Query: 176 AKERKKREK 184
KE++ ++
Sbjct: 458 LKEKEHNKE 466
Score = 51.2 bits (121), Expect = 3e-06
Identities = 52/195 (26%), Positives = 83/195 (42%), Gaps = 27/195 (13%)
Query: 92 EEQSRGQWARRRRRARSWSPSSSASSSASPGRSQSPRAAAAALSQQQSLQERLRLREERK 151
E +S R+ R+RS + S S SSS S R + ++ + S +S R R ++ R+
Sbjct: 178 EPESGKSNERKGGRSRSHTRSKSRSSSKSHSRRKRSQSKHRSRSHNRS---RSRQKDRRR 234
Query: 152 QQEELMKAFETPEEKRARRLAKKEAKERKKREKMGWGEEYMGYTNTDNPFGDNNLLGTFI 211
+ K ++ E +++R + K + REK+ E +
Sbjct: 235 SKSPHKKRSKSRERRKSRSRSHSRDKRKDTREKIKEKER--------------------V 274
Query: 212 WNKALEKKGISHLEEKELKERNKRIQEDNRLELQKVKQLRLEREREKAMREQELEM-LQR 270
K EK+ E ++ KER K D E + K +RERE RE+E E +
Sbjct: 275 KEKDREKEREREKEREKEKERGKNKDRDKEREKDREKDKEKDRERE---REKEHEKDRDK 331
Query: 271 EKEAEHFKTWEEQED 285
EKE E K E ++D
Sbjct: 332 EKEKEQDKEKEREKD 346
Score = 35.8 bits (81), Expect = 0.15
Identities = 32/106 (30%), Positives = 50/106 (47%), Gaps = 19/106 (17%)
Query: 8 RSRSAGRRGRRRQSQSGSRS------------RSRSHGRRNRR--RREDEG-----RRRR 48
RSRS+ R RRR+S+S SRS RS S RN++ +RE E RR R
Sbjct: 373 RSRSSSRERRRRRSRSSSRSPRTSKTIKRKSSRSPSPRSRNKKDKKREKERDHISERRER 432
Query: 49 RRRSRERRSDSEEERWQRSGMRSRSPPRPKWHSRDGSSQSDSGEEQ 94
R + R+S ++ + ++ S S + + SS S +++
Sbjct: 433 ERSTSMRKSSNDRDGKEKLEKNSTSLKEKEHNKEPDSSVSKEVDDK 478
>gi|222446603 golgi autoantigen, golgin subfamily a-like [Homo
sapiens]
Length = 668
Score = 67.0 bits (162), Expect = 6e-11
Identities = 63/299 (21%), Positives = 133/299 (44%), Gaps = 33/299 (11%)
Query: 19 RQSQSGSRSRSRSHGRRNRRRREDEGRRRRRRRSRERRSDSEEERWQRSGMRSRSPPRPK 78
R+ + + + + +R+ E++ R + +R+ +E + +EE+ + + R +
Sbjct: 380 RELEEKMHEQEKIREQEEKRQEEEKIREQEKRQEQEAKMWRQEEKIREQEEKIREQEKKM 439
Query: 79 WHSRDGSSQSDSGEEQSRGQWARRRRRARSWSPSSSASSSASPGRSQSPRAAAAALSQQQ 138
W + + + E+ +R+ + W R + + +Q+
Sbjct: 440 WRQEEKIHEQEKIREEE-----KRQEQEEMWRQEEKIREQEEIWRQKEKMHEQEKIRKQE 494
Query: 139 S----LQERLRLREER-KQQEELMKAFETPEEKRARRLAKKEAKERKKREKMGWGEEYMG 193
+E++ +EE+ ++QEE M E ++ ++ ++E K R++ E M EE MG
Sbjct: 495 EKVWRQEEKMHDQEEKIREQEEKMWRQEEKIREQEEKIREQEEKIREQEEMMQEQEEKMG 554
Query: 194 YTNTDNPFGDNNLLGTFIWNKALEKKGISHLEEKELKERNKRIQEDN---RLELQKV-KQ 249
K E++ + EEK ++E+ ++I+E R + +K+ +Q
Sbjct: 555 EQE----------------EKMQEQEKMRRQEEK-IREQEEKIREQKEKIREQEEKIWEQ 597
Query: 250 LRLEREREKAMREQELEML-QREKEAEHFKTWEEQEDNFHLQQAKL-RSKIRIRDGRAK 306
RE+E+ M+EQE +M Q EK E + +EQE+ Q+ K+ ++R+R K
Sbjct: 598 EEKIREQEEMMQEQEEKMWEQEEKMCEQEEKMQEQEEKMRRQEEKMWEQEVRLRQQEEK 656
Score = 55.5 bits (132), Expect = 2e-07
Identities = 85/391 (21%), Positives = 162/391 (41%), Gaps = 53/391 (13%)
Query: 101 RRRRRARSWSPSSSASSSASP-GRS-QSPRAAAAALSQQQSLQERLRLREERK--QQEEL 156
R+ RA+ P + A G+ QS A A ++ L RL ++E K +QEE
Sbjct: 249 RKLERAKLLLPQQQLQAEADHLGKELQSVSAKLQAQVEENELWNRLNQQQEEKMWRQEEK 308
Query: 157 MKAFETPEEKRARRLAKKEAKERKKREKMGWGEEYMGYTNTDNPFGDNNLLGTFIWNKAL 216
++ +E +++ ++ ++E K R++ EKM EE M W K
Sbjct: 309 IQEWEEKIQEQEEKIREQEEKIREQEEKMRRQEEMM-------------------WEKE- 348
Query: 217 EKKGISHLEEKELKERNKRIQEDNRLELQKVKQLRLEREREKAMREQELEMLQREKEAEH 276
EK E +E+ +R++E + +K+++L + ++ +REQE + + EK E
Sbjct: 349 EKMRRQEEMMWEKEEKMRRLEEMMWEKEEKIRELEEKMHEQEKIREQEEKRQEEEKIREQ 408
Query: 277 FKTWEEQEDNFHLQQAKL-RSKIRIRDGRAKPIDLLAKYISAEDDDLAVEMHEPYTFLNG 335
K E Q+AK+ R + +IR+ K + K E+ ++HE
Sbjct: 409 EKRQE--------QEAKMWRQEEKIREQEEKIREQEKKMWRQEE-----KIHEQEKIREE 455
Query: 336 LTVADMEDLLEDIQVYMELEQGKNADFWRDMTTITEDEISKLRKLEASGKGPGERREGVN 395
+ E++ + E E + WR + E E K+RK E E+
Sbjct: 456 EKRQEQEEMWRQEEKIREQE-----EIWRQKEKMHEQE--KIRKQEEKVWRQEEKMHDQE 508
Query: 396 ASVSSDVQSVFKGKTYNQLQVIFQGIEGKIRAGGPNLDMGYWESLLQQLRAHMARARLRE 455
+ + +++ + + Q E KIR + E ++Q+ M +
Sbjct: 509 EKIREQEEKMWRQEEKIREQ------EEKIREQEEKI--REQEEMMQEQEEKMGEQEEKM 560
Query: 456 RHQDVLRQKLYKLKQEQGVESEPLFPILKQE 486
+ Q+ +R++ K+++++ E I +QE
Sbjct: 561 QEQEKMRRQEEKIREQEEKIREQKEKIREQE 591
Score = 52.4 bits (124), Expect = 2e-06
Identities = 55/268 (20%), Positives = 111/268 (41%), Gaps = 36/268 (13%)
Query: 34 RRNRRRREDEGRRRRRRRSRERRSDSEEERWQRSGMRSRSPPRPKWHSRDGSSQSDSGEE 93
R N+++ E R+ + + E + +EE+ + + R Q +
Sbjct: 293 RLNQQQEEKMWRQEEKIQEWEEKIQEQEEKIREQEEKIRE-------------QEEKMRR 339
Query: 94 QSRGQWAR----RRRRARSWSPSSSASSSASPGRSQSPRAAAAALSQQQSLQERLRLREE 149
Q W + RR+ W + + L ++ QE++R +EE
Sbjct: 340 QEEMMWEKEEKMRRQEEMMWEKEEKMRRLEEMMWEKEEKIRE--LEEKMHEQEKIREQEE 397
Query: 150 RKQQEELMKAFETPEEKRARRLAKKEAKERKKREKMGWGEEYMGYTNTDNPFGDNNLLGT 209
++Q+EE ++ E +E+ A+ + ++E K R++ EK+ E+ M
Sbjct: 398 KRQEEEKIREQEKRQEQEAK-MWRQEEKIREQEEKIREQEKKMWRQE------------- 443
Query: 210 FIWNKALEKKGISHLEEKELKERNKRIQEDNRLELQKVKQLRLEREREKAMREQELEMLQ 269
K E++ I E+++ +E R +E R + + +Q E+EK +++E Q
Sbjct: 444 ---EKIHEQEKIREEEKRQEQEEMWRQEEKIREQEEIWRQKEKMHEQEKIRKQEEKVWRQ 500
Query: 270 REKEAEHFKTWEEQEDNFHLQQAKLRSK 297
EK + + EQE+ Q+ K+R +
Sbjct: 501 EEKMHDQEEKIREQEEKMWRQEEKIREQ 528
Score = 50.8 bits (120), Expect = 5e-06
Identities = 53/301 (17%), Positives = 119/301 (39%), Gaps = 50/301 (16%)
Query: 3 RDTRSRSRSAGRRGRRRQSQSGSRSRSRSHGRRNRRRREDEGRRRRRRRSRERRSDSEEE 62
R+ R + R+ + + R ++ R+E++ + + R E+R + EE
Sbjct: 406 REQEKRQEQEAKMWRQEEKIREQEEKIREQEKK-MWRQEEKIHEQEKIREEEKRQEQEEM 464
Query: 63 RWQRSGMRSRSPPRPKWHSRDGSSQSDSGEEQSRGQWAR-----------RRRRARSWSP 111
Q +R + W ++ + + +Q W + R + + W
Sbjct: 465 WRQEEKIREQEEI---WRQKEKMHEQEKIRKQEEKVWRQEEKMHDQEEKIREQEEKMWRQ 521
Query: 112 SSSASSSASPGRSQSPRAAAAALSQQQSLQERLRLREERKQQEELMKAFETPEEKRARRL 171
R Q + Q+ +E++ +EE+ Q++E M+ E ++ ++
Sbjct: 522 EEKIREQEEKIREQEEKIREQEEMMQEQ-EEKMGEQEEKMQEQEKMRRQEEKIREQEEKI 580
Query: 172 AKKEAKERKKREKMGWGEEYMGYTNTDNPFGDNNLLGTFIWNKALEKKGISHLEEKELKE 231
+++ K R++ EK+ EE + +++ + EEK ++
Sbjct: 581 REQKEKIREQEEKIWEQEEKI----------------------REQEEMMQEQEEKMWEQ 618
Query: 232 RNKRIQEDNRLELQKVKQLRLEREREKAMREQELEMLQREKEAEHFKTWEEQEDNFHLQQ 291
K +++ +++ Q+ K R +E+ M EQE+ + Q+E++ QE HL+
Sbjct: 619 EEKMCEQEEKMQEQEEKM----RRQEEKMWEQEVRLRQQEEKM--------QEHQEHLEA 666
Query: 292 A 292
A
Sbjct: 667 A 667
Score = 31.2 bits (69), Expect = 3.7
Identities = 21/60 (35%), Positives = 36/60 (60%), Gaps = 11/60 (18%)
Query: 224 LEEKELKERNKRIQEDNRL------ELQ-KVKQLRLEREREKAMREQELEMLQREKEAEH 276
+ ++ELKE+N ++QE +L E+Q VK+L+ + ER K + Q+ Q + EA+H
Sbjct: 214 ITDEELKEKNAKLQEKLQLVESEKSEIQLNVKELKRKLERAKLLLPQQ----QLQAEADH 269
>gi|41327771 DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Homo
sapiens]
Length = 820
Score = 66.6 bits (161), Expect = 8e-11
Identities = 63/200 (31%), Positives = 94/200 (47%), Gaps = 23/200 (11%)
Query: 5 TRSRSRSAGRRGRRRQSQSGSRSRSRSHGRRNRRRREDEGRRRRRRRSRERRSDSEEERW 64
++ R R R RR S+S SRSRS+S R RR +E E + R R ++R D + R
Sbjct: 41 SKDRKRHRSRDRRRGGSRSRSRSRSKS-AERERRHKERERDKERDRNKKDRDRDKDGHRR 99
Query: 65 QRSGMRSR-SPPRPKWHSRDGSSQSDSGEEQSRGQWARRRRRARSWS-------PSSSAS 116
+ RS SP R K S EE G ++ +A+ S +
Sbjct: 100 DKDRKRSSLSPGRGKDFKSRKDRDSKKDEEDEHGD---KKPKAQPLSLEELLAKKKAEEE 156
Query: 117 SSASPG-RSQSPRAAAAALSQQQSLQERLRLREE----RKQQEEL-MKAFETPEEKRARR 170
+ A P S++ R A A +QQ ++ER R+ EE RKQ ++L K E P+E+
Sbjct: 157 AEAKPKFLSKAEREAEALKRRQQEVEERQRMLEEERKKRKQFQDLGRKMLEDPQERE--- 213
Query: 171 LAKKEAKERKKREKMGWGEE 190
++E +ER +RE G +E
Sbjct: 214 --RRERRERMERETNGNEDE 231
Score = 54.7 bits (130), Expect = 3e-07
Identities = 65/301 (21%), Positives = 119/301 (39%), Gaps = 45/301 (14%)
Query: 4 DTRSRSRSAGRRGRRRQSQSGSRSRSRSHGRRN-----RRRREDEGRRRRRRRSRERRSD 58
D + R S + R+R S++ R R R R++ R+R RRR RSR R
Sbjct: 7 DKKDRDASPSKEERKR-SRTPDRERDRDRDRKSSPSKDRKRHRSRDRRRGGSRSRSRSRS 65
Query: 59 SEEERWQRSGMRSRSPPR---PKWHSRDGSSQSDSGEEQSRGQWARRRRRARSWSPSSSA 115
ER +R R R R K RD + + R + +S S
Sbjct: 66 KSAERERRHKERERDKERDRNKKDRDRDKDGHRRDKDRKRSSLSPGRGKDFKSRKDRDSK 125
Query: 116 SSSASPGRSQSPRAAAAALSQQQSLQERLRLREERKQQEELMKAFETPEEKRARRLAKKE 175
+ P+A +L + L + + EE + + + + E E RR + E
Sbjct: 126 KDEEDEHGDKKPKAQPLSL---EELLAKKKAEEEAEAKPKFLSKAEREAEALKRRQQEVE 182
Query: 176 AKERKKREKMGWGEEYMGYTNTDNPFGDNNLLGTFIWNKALEKKGISHLEEKELKERNKR 235
++R E+ +++ + L +K + +E+E +ER +R
Sbjct: 183 ERQRMLEEERKKRKQF----------------------QDLGRKMLEDPQERERRERRER 220
Query: 236 IQ-EDNRLELQKVKQ-LRLEREREK---AMREQELEMLQREKEAEHFK------TWEEQE 284
++ E N E ++ +Q +R E+++ K A++E+ L +++ + H W+ E
Sbjct: 221 MERETNGNEDEEGRQKIREEKDKSKELHAIKERYLGGIKKRRRTRHLNDRKFVFEWDASE 280
Query: 285 D 285
D
Sbjct: 281 D 281
Score = 53.9 bits (128), Expect = 5e-07
Identities = 68/294 (23%), Positives = 117/294 (39%), Gaps = 56/294 (19%)
Query: 12 AGRRGRRRQSQSGSRSRSRSHGR---RNRRRREDEGRRRRRRRSRERRSDSEEERWQRSG 68
A ++ R R RSR+ R R+R R+ + R+R RSR+RR R G
Sbjct: 6 ADKKDRDASPSKEERKRSRTPDRERDRDRDRKSSPSKDRKRHRSRDRR---------RGG 56
Query: 69 MRSRSPPRPKWHSRDGS-SQSDSGEEQSRGQWARRRRRARSWSPSSSASSSASPGRSQSP 127
RSRS R K R+ + + +E+ R + R R + SS SPGR +
Sbjct: 57 SRSRSRSRSKSAERERRHKERERDKERDRNKKDRDRDKDGHRRDKDRKRSSLSPGRGKDF 116
Query: 128 RAAAAALSQQQSLQERLRLREERKQQEELMKAFETPEEKRARRLAKKEAKERKKREKMGW 187
++ S++ E ++K + + + E +K+A A+ + K K E+
Sbjct: 117 KSRKDRDSKKDEEDEH----GDKKPKAQPLSLEELLAKKKAEEEAEAKPKFLSKAEREA- 171
Query: 188 GEEYMGYTNTDNPFGDNNLLGTFIWNKALEKKGISHLEEKELKERNKRIQEDNRLELQ-- 245
+AL+++ ++E++ER + ++E+ + Q
Sbjct: 172 --------------------------EALKRR------QQEVEERQRMLEEERKKRKQFQ 199
Query: 246 ----KVKQLRLEREREKAMREQELEMLQREKEAEHFKTWEEQEDNFHLQQAKLR 295
K+ + ERER + E E E E K EE++ + L K R
Sbjct: 200 DLGRKMLEDPQERERRERRERMERETNGNEDEEGRQKIREEKDKSKELHAIKER 253
Score = 49.7 bits (117), Expect = 1e-05
Identities = 52/185 (28%), Positives = 76/185 (41%), Gaps = 30/185 (16%)
Query: 17 RRRQSQSGSRSRSRSHGRRNRRRREDEGRRR----RRRRSRERRSDSEEERWQRSGMRSR 72
+RRQ + R R R+ R++ +D GR+ + R RERR E E R
Sbjct: 175 KRRQQEVEERQRMLEEERKKRKQFQDLGRKMLEDPQERERRERRERMERETNGNEDEEGR 234
Query: 73 SPPRPKWHSRDGSSQSDSGEEQSRGQWARRRRRAR--------SWSPSSSASSSASPGRS 124
R + +D S + + +E+ G +RRR W S S +P
Sbjct: 235 QKIREE---KDKSKELHAIKERYLGGIKKRRRTRHLNDRKFVFEWDASEDTSIDYNPLYK 291
Query: 125 QSPRA--------AAAALSQQQSLQERLR--LREERKQQEELMKAFETPEEKRARRLAKK 174
+ + A L QQ+ Q R L E+R+ EE + EE R R+L KK
Sbjct: 292 ERHQVQLLGRGFIAGIDLKQQKREQSRFYGDLMEKRRTLEE-----KEQEEARLRKLRKK 346
Query: 175 EAKER 179
EAK+R
Sbjct: 347 EAKQR 351
>gi|221139764 PHD and ring finger domains 1 [Homo sapiens]
Length = 1648
Score = 65.5 bits (158), Expect = 2e-10
Identities = 58/215 (26%), Positives = 89/215 (41%), Gaps = 26/215 (12%)
Query: 4 DTRSRSRSAGRRGRRRQSQSGSRSRSRSHGRRNRRRREDEGRRRRRRRSRERRSDSEEER 63
+ R SRS R + ++ + SR HGR R + R R RS E R
Sbjct: 985 ELRPPSRSRSTSSSRSRKKAKRKRVSREHGRTRSGTRSES--RDRSSRSASPSVGEERPR 1042
Query: 64 WQRSGMRSRSPPRPKWHSRDGSSQ---SDSGEEQSRGQW--ARRRRRARSWSPSSSA--- 115
QRS +SR + SR+ + + D E RG W +RR R+RS SP SS+
Sbjct: 1043 RQRSKAKSRRSSSDRSSSRERAKRKKAKDKSREHRRGPWGHSRRTSRSRSGSPGSSSYEH 1102
Query: 116 ----------SSSASPGRSQSPRAAAAALSQQQSLQERLRLREERKQQEELMKAFETPEE 165
S+S GR SP ++ L + + +ER R +RK+ + P +
Sbjct: 1103 YESRKKKKRRSASRPRGRECSPTSSLERLCRHKHQRERSHERPDRKE------SVAWPRD 1156
Query: 166 KRARRLAKKEAKERKKREKMGWGEEYMGYTNTDNP 200
+R RR ++ R + + E T + +P
Sbjct: 1157 RRKRRSRSPSSEHRAREHRRPRSREKWPQTRSHSP 1191
Score = 30.0 bits (66), Expect = 8.3
Identities = 28/97 (28%), Positives = 37/97 (38%), Gaps = 25/97 (25%)
Query: 6 RSRSRSAGRRGRRRQSQSGS--------RSRSRSHGR----------RNRRRR------- 40
+ + RSA R R S + S R RSH R R+RR+R
Sbjct: 1108 KKKRRSASRPRGRECSPTSSLERLCRHKHQRERSHERPDRKESVAWPRDRRKRRSRSPSS 1167
Query: 41 EDEGRRRRRRRSRERRSDSEEERWQRSGMRSRSPPRP 77
E R RR RSRE+ + +R G + P P
Sbjct: 1168 EHRAREHRRPRSREKWPQTRSHSPERKGAVREASPAP 1204
>gi|239749449 PREDICTED: hypothetical protein [Homo sapiens]
Length = 275
Score = 65.1 bits (157), Expect = 2e-10
Identities = 43/182 (23%), Positives = 86/182 (47%), Gaps = 11/182 (6%)
Query: 3 RDTRSRSRSAGRRGRRRQSQSGSRSRSRSHGRRNRRRREDEGRRRRRRRSRERRSDSEEE 62
R+ R R R R+ R + + R + R R+R+E E ++R+ RR +ERR +E+
Sbjct: 43 REKRKREREKERKRERGKKEKKKRKKRERGKERERKRKERE-KQRKERREKERRKRKKEK 101
Query: 63 RWQRSGMRSRSPPRPKWHSRDGSSQSDSGEEQSRGQWARRRRRARSWSPSSSASSSASPG 122
+ + R R + K ++ ++ E+ R + +++RR G
Sbjct: 102 KKRERKQRGRRERKKKKERKERERENKQRRERKRKKRRKKKRR-------KERKREKERG 154
Query: 123 RSQSPRAAAAALSQQQSLQERLRLREERKQQEELMKAFETPEEKRARRLAKKEAKERKKR 182
+ + R +++ ++R R R+ERK++ E + E +E++ R KKE K+ +K
Sbjct: 155 KRERKRKKR---KKEEREKKRERNRKERKKERERKERRERKKERKKERRKKKERKKDRKT 211
Query: 183 EK 184
++
Sbjct: 212 DR 213
Score = 56.2 bits (134), Expect = 1e-07
Identities = 35/165 (21%), Positives = 72/165 (43%), Gaps = 2/165 (1%)
Query: 22 QSGSRSRSRSHGRRNRRRREDEGRRRRRRRSRERRSDSEEERWQRSGMRSRSPPRPKWHS 81
+ R + R + +R RE E +R R ++ +++R E + + + R R +
Sbjct: 32 RESERKKERREREKRKREREKERKRERGKKEKKKRKKRERGKERERKRKEREKQRKERRE 91
Query: 82 RDGSSQSDSGEEQSRGQWARRRRRARSWSPSSSASSSASPGRSQSPRAAAAALSQQQSLQ 141
++ + +++ R Q RR R+ + + R + R +++ +
Sbjct: 92 KERRKRKKEKKKRERKQRGRRERKKKKERKERERENKQRRERKRKKRRKKKRRKERKREK 151
Query: 142 ERLRLREERK--QQEELMKAFETPEEKRARRLAKKEAKERKKREK 184
ER + +RK ++EE K E ++R + +KE +ERKK K
Sbjct: 152 ERGKRERKRKKRKKEEREKKRERNRKERKKERERKERRERKKERK 196
Score = 53.1 bits (126), Expect = 9e-07
Identities = 62/308 (20%), Positives = 118/308 (38%), Gaps = 50/308 (16%)
Query: 9 SRSAGRRGRRRQSQSGSRSRSRSHGRRNRRRREDEGRRRRRRRSRERRSDSEEERWQRSG 68
SR+A + Q S S R + R++E RR R +R RER + + ER ++
Sbjct: 7 SRAAVKLNTELQMVSCSHISKPCTQRESERKKE---RREREKRKREREKERKRERGKKEK 63
Query: 69 MRSRSPPRPKWHSRDGSSQSDSGEEQSRGQWARRRRRARSWSPSSSASSSASPGRSQSPR 128
+ + R K R +E+ + + RR + R GR +
Sbjct: 64 KKRKKRERGKERER-------KRKEREKQRKERREKERRKRKKEKKKRERKQRGRRE--- 113
Query: 129 AAAAALSQQQSLQERLRLREERKQQEELMKAFETPEEKRARRLAKKEAKERKKREKMGWG 188
++ +ER E KQ+ E + +++R R +KE +R+++ K
Sbjct: 114 --------RKKKKERKERERENKQRRERKRKKRRKKKRRKERKREKERGKRERKRKKRKK 165
Query: 189 EEYMGYTNTDNPFGDNNLLGTFIWNKALEKKGISHLEEKELKERNKRIQEDNRLELQKVK 248
EE K E+ +E+E KER +R +++ + E +K K
Sbjct: 166 EER---------------------EKKRERNRKERKKERERKERRER-KKERKKERRKKK 203
Query: 249 QLRLEREREKAMREQELEMLQRE-------KEAEHFKTWEEQEDNFHLQQAKLRSKIRIR 301
+ + +R+ ++ Q L+ ++ + D+F ++ L S+ +
Sbjct: 204 ERKKDRKTDRQTDSQVFRPLRESAFNRVTVTGVFRYRIFHTGLDHFPIKTNILLSRHEVN 263
Query: 302 DGRAKPID 309
DG + D
Sbjct: 264 DGEIEVND 271
Score = 42.4 bits (98), Expect = 0.002
Identities = 26/109 (23%), Positives = 50/109 (45%), Gaps = 3/109 (2%)
Query: 3 RDTRSRSRSAGRRGRRR---QSQSGSRSRSRSHGRRNRRRREDEGRRRRRRRSRERRSDS 59
R R R + R+ R R Q + R + R RR R+RE E +R R+R + ++ +
Sbjct: 109 RGRRERKKKKERKERERENKQRRERKRKKRRKKKRRKERKREKERGKRERKRKKRKKEER 168
Query: 60 EEERWQRSGMRSRSPPRPKWHSRDGSSQSDSGEEQSRGQWARRRRRARS 108
E++R + R + R + R + + +++ R + + R+ S
Sbjct: 169 EKKRERNRKERKKERERKERRERKKERKKERRKKKERKKDRKTDRQTDS 217
>gi|38146113 arginine/serine-rich coiled-coil 2 isoform b [Homo
sapiens]
Length = 375
Score = 65.1 bits (157), Expect = 2e-10
Identities = 54/171 (31%), Positives = 78/171 (45%), Gaps = 16/171 (9%)
Query: 2 GRDTRSRSRSAGRRGRRRQSQSGSRSRSRSHGRRNRRRREDEGRRRRRR----RSRERRS 57
G D R RGR S S SRSR R H R+R R++ R R R+ RSRER+
Sbjct: 49 GEDRHKRKERKSSRGR---SHSRSRSRERRHRSRSRERKKSRSRSRERKKSRSRSRERKK 105
Query: 58 DSEEERWQRSGMRSRSPPRPKWHSRDGSSQSDSGEEQSRGQWARRRRRARSWSPSSSASS 117
R ++ +RSRS R + R S + R +R + R +S S S +
Sbjct: 106 SRSRSRERKRRIRSRSRSRSRHRHRTRSRSRTRSRSRDR---KKRIEKPRRFSRSLSRTP 162
Query: 118 SASPGRSQ-----SPRAAAAALSQQQSLQE-RLRLREERKQQEELMKAFET 162
S P R + + A A L + + LQE R + E+++Q+E+ A T
Sbjct: 163 SPPPFRGRNTAMDAQEALARRLERAKKLQEQREKEMVEKQKQQEIAAAAAT 213
Score = 57.4 bits (137), Expect = 5e-08
Identities = 58/184 (31%), Positives = 84/184 (45%), Gaps = 20/184 (10%)
Query: 2 GRDTRSRSRSAGRRGRRRQSQSGSRSRSRSHGRRNRRRREDEGRRRRRRRSRERRSDSEE 61
GR+ + S + R +R++ +S SR RSH R R R R R RSRER+
Sbjct: 39 GRERLNSSENGEDRHKRKERKS---SRGRSHSRSRSRER------RHRSRSRERKKSRSR 89
Query: 62 ERWQRSGMRSRSPPRPKWHSRDGSSQSDSGEEQSRGQ-WARRRRRARSWSPSSSASSSAS 120
R +R RSRS R K SR S+ +SR + +R R R RS S + S S
Sbjct: 90 SR-ERKKSRSRSRERKKSRSR---SRERKRRIRSRSRSRSRHRHRTRSRSRTRSRSRDRK 145
Query: 121 PGRSQSPRAAAAALSQQQSLQERLRLREERKQQEELMKAFETPEEKRARRLAKKEAKERK 180
R + PR + +LS+ S QE L + E RA++L ++ KE
Sbjct: 146 K-RIEKPRRFSRSLSRTPSPPPFRGRNTAMDAQEALARRLE-----RAKKLQEQREKEMV 199
Query: 181 KREK 184
+++K
Sbjct: 200 EKQK 203
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.132 0.384
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,737,834
Number of Sequences: 37866
Number of extensions: 1810172
Number of successful extensions: 33711
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 447
Number of HSP's successfully gapped in prelim test: 1077
Number of HSP's that attempted gapping in prelim test: 15148
Number of HSP's gapped (non-prelim): 8791
length of query: 758
length of database: 18,247,518
effective HSP length: 110
effective length of query: 648
effective length of database: 14,082,258
effective search space: 9125303184
effective search space used: 9125303184
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.