Guide to the Human Genome
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Search of human proteins with 42544130

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|42544130 splicing factor 1 isoform 1 [Homo sapiens]
         (639 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|42544130 splicing factor 1 isoform 1 [Homo sapiens]               1369   0.0  
gi|42544125 splicing factor 1 isoform 2 [Homo sapiens]               1273   0.0  
gi|42544123 splicing factor 1 isoform 3 [Homo sapiens]               1122   0.0  
gi|160707881 formin 2 [Homo sapiens]                                  136   5e-32
gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens]    127   3e-29
gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1 pre...   120   5e-27
gi|116284398 WAS/WASL interacting protein family, member 1 [Homo...   116   7e-26
gi|38373695 WAS/WASL interacting protein family, member 1 [Homo ...   116   7e-26
gi|112382226 atrophin-1 like protein isoform b [Homo sapiens]         115   9e-26
gi|112382224 atrophin-1 like protein isoform a [Homo sapiens]         115   9e-26
gi|112382216 atrophin-1 like protein isoform a [Homo sapiens]         115   9e-26
gi|42544127 splicing factor 1 isoform 4 [Homo sapiens]                112   8e-25
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi...   112   1e-24
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin...   108   2e-23
gi|117306167 proline-rich protein BstNI subfamily 3 precursor [H...   107   3e-23
gi|119395760 diaphanous 1 isoform 2 [Homo sapiens]                    105   1e-22
gi|119395758 diaphanous 1 isoform 1 [Homo sapiens]                    105   1e-22
gi|47132519 Ras association and pleckstrin homology domains 1 is...   105   2e-22
gi|150417989 cyclin K isoform 1 [Homo sapiens]                        105   2e-22
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi...   103   4e-22
gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Ho...   103   6e-22
gi|162329583 cleavage and polyadenylation specific factor 6, 68 ...   102   1e-21
gi|163965366 nascent polypeptide-associated complex alpha subuni...   101   2e-21
gi|21361376 splicing factor 3a, subunit 2 [Homo sapiens]              100   3e-21
gi|45827712 quaking homolog, KH domain RNA binding isoform HQK-7...   100   5e-21
gi|45827710 quaking homolog, KH domain RNA binding isoform HQK-7...   100   5e-21
gi|45827708 quaking homolog, KH domain RNA binding isoform HQK-6...   100   5e-21
gi|45827706 quaking homolog, KH domain RNA binding isoform HQK-5...   100   5e-21
gi|18959210 WIRE protein [Homo sapiens]                               100   7e-21
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi...    99   1e-20

>gi|42544130 splicing factor 1 isoform 1 [Homo sapiens]
          Length = 639

 Score = 1369 bits (3544), Expect = 0.0
 Identities = 639/639 (100%), Positives = 639/639 (100%)

Query: 1   MATGANATPLDFPSKKRKRSRWNQDTMEQKTVIPGMPTVIPPGLTREQERAYIVQLQIED 60
           MATGANATPLDFPSKKRKRSRWNQDTMEQKTVIPGMPTVIPPGLTREQERAYIVQLQIED
Sbjct: 1   MATGANATPLDFPSKKRKRSRWNQDTMEQKTVIPGMPTVIPPGLTREQERAYIVQLQIED 60

Query: 61  LTRKLRTGDLGIPPNPEDRSPSPEPIYNSEGKRLNTREFRTRKKLEEERHNLITEMVALN 120
           LTRKLRTGDLGIPPNPEDRSPSPEPIYNSEGKRLNTREFRTRKKLEEERHNLITEMVALN
Sbjct: 61  LTRKLRTGDLGIPPNPEDRSPSPEPIYNSEGKRLNTREFRTRKKLEEERHNLITEMVALN 120

Query: 121 PDFKPPADYKPPATRVSDKVMIPQDEYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGK 180
           PDFKPPADYKPPATRVSDKVMIPQDEYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGK
Sbjct: 121 PDFKPPADYKPPATRVSDKVMIPQDEYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGK 180

Query: 181 GSVKEGKVGRKDGQMLPGEDEPLHALVTANTMENVKKAVEQIRNILKQGIETPEDQNDLR 240
           GSVKEGKVGRKDGQMLPGEDEPLHALVTANTMENVKKAVEQIRNILKQGIETPEDQNDLR
Sbjct: 181 GSVKEGKVGRKDGQMLPGEDEPLHALVTANTMENVKKAVEQIRNILKQGIETPEDQNDLR 240

Query: 241 KMQLRELARLNGTLREDDNRILRPWQSSETRSITNTTVCTKCGGAGHIASDCKFQRPGDP 300
           KMQLRELARLNGTLREDDNRILRPWQSSETRSITNTTVCTKCGGAGHIASDCKFQRPGDP
Sbjct: 241 KMQLRELARLNGTLREDDNRILRPWQSSETRSITNTTVCTKCGGAGHIASDCKFQRPGDP 300

Query: 301 QSAQDKARMDKEYLSLMAELGEAPVPASVGSTSGPATTPLASAPRPAAPANNPPPPSLMS 360
           QSAQDKARMDKEYLSLMAELGEAPVPASVGSTSGPATTPLASAPRPAAPANNPPPPSLMS
Sbjct: 301 QSAQDKARMDKEYLSLMAELGEAPVPASVGSTSGPATTPLASAPRPAAPANNPPPPSLMS 360

Query: 361 TTQSRPPWMNSGPSESRPYHGMHGGGPGGPGGGPHSFPHPLPSLTGGHGGHPMQHNPNGP 420
           TTQSRPPWMNSGPSESRPYHGMHGGGPGGPGGGPHSFPHPLPSLTGGHGGHPMQHNPNGP
Sbjct: 361 TTQSRPPWMNSGPSESRPYHGMHGGGPGGPGGGPHSFPHPLPSLTGGHGGHPMQHNPNGP 420

Query: 421 PPPWMQPPPPPMNQGPHPPGHHGPPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPMGMMPP 480
           PPPWMQPPPPPMNQGPHPPGHHGPPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPMGMMPP
Sbjct: 421 PPPWMQPPPPPMNQGPHPPGHHGPPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPMGMMPP 480

Query: 481 PPPPPSGQPPPPPSGPLPPWQQQQQQPPPPPPPSSSMASSTPLPWQQNTTTTTTSAGTGS 540
           PPPPPSGQPPPPPSGPLPPWQQQQQQPPPPPPPSSSMASSTPLPWQQNTTTTTTSAGTGS
Sbjct: 481 PPPPPSGQPPPPPSGPLPPWQQQQQQPPPPPPPSSSMASSTPLPWQQNTTTTTTSAGTGS 540

Query: 541 IPPWQQQQAAAAASPGAPQMQGNPTMVPLPPGVQPPLPPGAPPPPPPPPPGSAGMMYAPP 600
           IPPWQQQQAAAAASPGAPQMQGNPTMVPLPPGVQPPLPPGAPPPPPPPPPGSAGMMYAPP
Sbjct: 541 IPPWQQQQAAAAASPGAPQMQGNPTMVPLPPGVQPPLPPGAPPPPPPPPPGSAGMMYAPP 600

Query: 601 PPPPPPMDPSNFVTMMGMGVAGMPPFGMPPAPPPPPPQN 639
           PPPPPPMDPSNFVTMMGMGVAGMPPFGMPPAPPPPPPQN
Sbjct: 601 PPPPPPMDPSNFVTMMGMGVAGMPPFGMPPAPPPPPPQN 639


>gi|42544125 splicing factor 1 isoform 2 [Homo sapiens]
          Length = 638

 Score = 1273 bits (3294), Expect = 0.0
 Identities = 599/612 (97%), Positives = 601/612 (98%)

Query: 1   MATGANATPLDFPSKKRKRSRWNQDTMEQKTVIPGMPTVIPPGLTREQERAYIVQLQIED 60
           MATGANATPLDFPSKKRKRSRWNQDTMEQKTVIPGMPTVIPPGLTREQERAYIVQLQIED
Sbjct: 1   MATGANATPLDFPSKKRKRSRWNQDTMEQKTVIPGMPTVIPPGLTREQERAYIVQLQIED 60

Query: 61  LTRKLRTGDLGIPPNPEDRSPSPEPIYNSEGKRLNTREFRTRKKLEEERHNLITEMVALN 120
           LTRKLRTGDLGIPPNPEDRSPSPEPIYNSEGKRLNTREFRTRKKLEEERHNLITEMVALN
Sbjct: 61  LTRKLRTGDLGIPPNPEDRSPSPEPIYNSEGKRLNTREFRTRKKLEEERHNLITEMVALN 120

Query: 121 PDFKPPADYKPPATRVSDKVMIPQDEYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGK 180
           PDFKPPADYKPPATRVSDKVMIPQDEYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGK
Sbjct: 121 PDFKPPADYKPPATRVSDKVMIPQDEYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGK 180

Query: 181 GSVKEGKVGRKDGQMLPGEDEPLHALVTANTMENVKKAVEQIRNILKQGIETPEDQNDLR 240
           GSVKEGKVGRKDGQMLPGEDEPLHALVTANTMENVKKAVEQIRNILKQGIETPEDQNDLR
Sbjct: 181 GSVKEGKVGRKDGQMLPGEDEPLHALVTANTMENVKKAVEQIRNILKQGIETPEDQNDLR 240

Query: 241 KMQLRELARLNGTLREDDNRILRPWQSSETRSITNTTVCTKCGGAGHIASDCKFQRPGDP 300
           KMQLRELARLNGTLREDDNRILRPWQSSETRSITNTTVCTKCGGAGHIASDCKFQRPGDP
Sbjct: 241 KMQLRELARLNGTLREDDNRILRPWQSSETRSITNTTVCTKCGGAGHIASDCKFQRPGDP 300

Query: 301 QSAQDKARMDKEYLSLMAELGEAPVPASVGSTSGPATTPLASAPRPAAPANNPPPPSLMS 360
           QSAQDKARMDKEYLSLMAELGEAPVPASVGSTSGPATTPLASAPRPAAPANNPPPPSLMS
Sbjct: 301 QSAQDKARMDKEYLSLMAELGEAPVPASVGSTSGPATTPLASAPRPAAPANNPPPPSLMS 360

Query: 361 TTQSRPPWMNSGPSESRPYHGMHGGGPGGPGGGPHSFPHPLPSLTGGHGGHPMQHNPNGP 420
           TTQSRPPWMNSGPSESRPYHGMHGGGPGGPGGGPHSFPHPLPSLTGGHGGHPMQHNPNGP
Sbjct: 361 TTQSRPPWMNSGPSESRPYHGMHGGGPGGPGGGPHSFPHPLPSLTGGHGGHPMQHNPNGP 420

Query: 421 PPPWMQPPPPPMNQGPHPPGHHGPPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPMGMMPP 480
           PPPWMQPPPPPMNQGPHPPGHHGPPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPMGMMPP
Sbjct: 421 PPPWMQPPPPPMNQGPHPPGHHGPPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPMGMMPP 480

Query: 481 PPPPPSGQPPPPPSGPLPPWQQQQQQPPPPPPPSSSMASSTPLPWQQNTTTTTTSAGTGS 540
           PPPPPSGQPPPPPSGPLPPWQQQQQQPPPPPPPSSSMASSTPLPWQQNTTTTTTSAGTGS
Sbjct: 481 PPPPPSGQPPPPPSGPLPPWQQQQQQPPPPPPPSSSMASSTPLPWQQNTTTTTTSAGTGS 540

Query: 541 IPPWQQQQAAAAASPGAPQMQGNPTMVPLPPGVQPPLPPGAPPPPPPPPPGSAGMMYAPP 600
           IPPWQQQQAAAAASPGAPQMQGNPTMVPLPPGVQPPLPPGAPPPPPPPPPGSAGMM  P 
Sbjct: 541 IPPWQQQQAAAAASPGAPQMQGNPTMVPLPPGVQPPLPPGAPPPPPPPPPGSAGMMIPPR 600

Query: 601 PPPPPPMDPSNF 612
               P  +  +F
Sbjct: 601 GGDGPSHESEDF 612



 Score = 65.1 bits (157), Expect = 2e-10
 Identities = 58/183 (31%), Positives = 67/183 (36%), Gaps = 43/183 (23%)

Query: 481 PPPPPSGQPPPPPSGPLPPWQQQQQQPPPPPPPSSSMASSTPLPWQQNTTTTTTSAGTGS 540
           P P   G    P + PL    +       PPPPS    + +  PW         ++G   
Sbjct: 324 PVPASVGSTSGPATTPLASAPRPAAPANNPPPPSLMSTTQSRPPWM--------NSGPSE 375

Query: 541 IPPWQQQQAAAAASPGAPQMQGNPTMVPLP--------PGVQPPLPPGAPPPP---PPPP 589
             P+          PG     G P   P P         G      P  PPPP   PPPP
Sbjct: 376 SRPYHGMHGGGPGGPG-----GGPHSFPHPLPSLTGGHGGHPMQHNPNGPPPPWMQPPPP 430

Query: 590 PGSAGMMYAPPPPP----PPPMDPSNFVTMMGMGV------AGM---PPFGM-PPAPPPP 635
           P + G     P PP    PPPMD     T +G GV       GM   PP GM PP PPPP
Sbjct: 431 PMNQG-----PHPPGHHGPPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPMGMMPPPPPPP 485

Query: 636 PPQ 638
             Q
Sbjct: 486 SGQ 488



 Score = 32.0 bits (71), Expect = 1.8
 Identities = 37/143 (25%), Positives = 40/143 (27%), Gaps = 45/143 (31%)

Query: 264 PWQSSETRSITNTTVCTKCGGAGHIASDCKFQRPGDPQSAQDKARMDKEYLSLMAELGEA 323
           PWQ        NTT  T   G G I        P   Q A                   A
Sbjct: 524 PWQQ-------NTTTTTTSAGTGSIP-------PWQQQQA-----------------AAA 552

Query: 324 PVPASVGSTSGPATTPLASAPRPAAPANNPPPPSLMSTTQSRPPWMNSGPSESRPYHGMH 383
             P +      P   PL    +P  P   PPPP         PP   S      P  G  
Sbjct: 553 ASPGAPQMQGNPTMVPLPPGVQPPLPPGAPPPPP--------PPPPGSAGMMIPPRGG-- 602

Query: 384 GGGPGGPGGGPHSFPHPLPSLTG 406
                GP      FP PL +L G
Sbjct: 603 ----DGPSHESEDFPRPLVTLPG 621


>gi|42544123 splicing factor 1 isoform 3 [Homo sapiens]
          Length = 548

 Score = 1122 bits (2903), Expect = 0.0
 Identities = 528/536 (98%), Positives = 529/536 (98%)

Query: 1   MATGANATPLDFPSKKRKRSRWNQDTMEQKTVIPGMPTVIPPGLTREQERAYIVQLQIED 60
           MATGANATPLDFPSKKRKRSRWNQDTMEQKTVIPGMPTVIPPGLTREQERAYIVQLQIED
Sbjct: 1   MATGANATPLDFPSKKRKRSRWNQDTMEQKTVIPGMPTVIPPGLTREQERAYIVQLQIED 60

Query: 61  LTRKLRTGDLGIPPNPEDRSPSPEPIYNSEGKRLNTREFRTRKKLEEERHNLITEMVALN 120
           LTRKLRTGDLGIPPNPEDRSPSPEPIYNSEGKRLNTREFRTRKKLEEERHNLITEMVALN
Sbjct: 61  LTRKLRTGDLGIPPNPEDRSPSPEPIYNSEGKRLNTREFRTRKKLEEERHNLITEMVALN 120

Query: 121 PDFKPPADYKPPATRVSDKVMIPQDEYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGK 180
           PDFKPPADYKPPATRVSDKVMIPQDEYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGK
Sbjct: 121 PDFKPPADYKPPATRVSDKVMIPQDEYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGK 180

Query: 181 GSVKEGKVGRKDGQMLPGEDEPLHALVTANTMENVKKAVEQIRNILKQGIETPEDQNDLR 240
           GSVKEGKVGRKDGQMLPGEDEPLHALVTANTMENVKKAVEQIRNILKQGIETPEDQNDLR
Sbjct: 181 GSVKEGKVGRKDGQMLPGEDEPLHALVTANTMENVKKAVEQIRNILKQGIETPEDQNDLR 240

Query: 241 KMQLRELARLNGTLREDDNRILRPWQSSETRSITNTTVCTKCGGAGHIASDCKFQRPGDP 300
           KMQLRELARLNGTLREDDNRILRPWQSSETRSITNTTVCTKCGGAGHIASDCKFQRPGDP
Sbjct: 241 KMQLRELARLNGTLREDDNRILRPWQSSETRSITNTTVCTKCGGAGHIASDCKFQRPGDP 300

Query: 301 QSAQDKARMDKEYLSLMAELGEAPVPASVGSTSGPATTPLASAPRPAAPANNPPPPSLMS 360
           QSAQDKARMDKEYLSLMAELGEAPVPASVGSTSGPATTPLASAPRPAAPANNPPPPSLMS
Sbjct: 301 QSAQDKARMDKEYLSLMAELGEAPVPASVGSTSGPATTPLASAPRPAAPANNPPPPSLMS 360

Query: 361 TTQSRPPWMNSGPSESRPYHGMHGGGPGGPGGGPHSFPHPLPSLTGGHGGHPMQHNPNGP 420
           TTQSRPPWMNSGPSESRPYHGMHGGGPGGPGGGPHSFPHPLPSLTGGHGGHPMQHNPNGP
Sbjct: 361 TTQSRPPWMNSGPSESRPYHGMHGGGPGGPGGGPHSFPHPLPSLTGGHGGHPMQHNPNGP 420

Query: 421 PPPWMQPPPPPMNQGPHPPGHHGPPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPMGMMPP 480
           PPPWMQPPPPPMNQGPHPPGHHGPPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPMGMMPP
Sbjct: 421 PPPWMQPPPPPMNQGPHPPGHHGPPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPMGMMPP 480

Query: 481 PPPPPSGQPPPPPSGPLPPWQQQQQQPPPPPPPSSSMASSTPLPWQQNTTTTTTSA 536
           PPPPPSGQPPPPPSGPLPPWQQQQQQPPPPPPPSSSMASSTPLPWQQ +      A
Sbjct: 481 PPPPPSGQPPPPPSGPLPPWQQQQQQPPPPPPPSSSMASSTPLPWQQRSLPAAAMA 536



 Score = 68.2 bits (165), Expect = 2e-11
 Identities = 57/180 (31%), Positives = 66/180 (36%), Gaps = 42/180 (23%)

Query: 481 PPPPPSGQPPPPPSGPLPPWQQQQQQPPPPPPPSSSMASSTPLPWQQNTTTTTTSAGTGS 540
           P P   G    P + PL    +       PPPPS    + +  PW         ++G   
Sbjct: 324 PVPASVGSTSGPATTPLASAPRPAAPANNPPPPSLMSTTQSRPPWM--------NSGPSE 375

Query: 541 IPPWQQQQAAAAASPGAPQMQGNPTMVPLP--------PGVQPPLPPGAPPPP---PPPP 589
             P+          PG     G P   P P         G      P  PPPP   PPPP
Sbjct: 376 SRPYHGMHGGGPGGPG-----GGPHSFPHPLPSLTGGHGGHPMQHNPNGPPPPWMQPPPP 430

Query: 590 PGSAGMMYAPPPPP----PPPMDPSNFVTMMGMGV------AGM---PPFGMPPAPPPPP 636
           P + G     P PP    PPPMD     T +G GV       GM   PP GM P PPPPP
Sbjct: 431 PMNQG-----PHPPGHHGPPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPMGMMPPPPPPP 485


>gi|160707881 formin 2 [Homo sapiens]
          Length = 1722

 Score =  136 bits (343), Expect = 5e-32
 Identities = 124/362 (34%), Positives = 146/362 (40%), Gaps = 70/362 (19%)

Query: 324  PVPASVGSTSGPATTPLASAPRPAAPANNPPPPSLMSTTQSRPPWMNSGPSESRPYHGMH 383
            P+P +  S+S P    L   P P  P      P+L ST   +PP +        P   + 
Sbjct: 860  PLPCTESSSSMPG---LGMVPPPPPPLPGMTVPTLPSTAIPQPPPLQGTEMLPPPPPPLP 916

Query: 384  GGGPGGPGGGPHSFPHPLPSLTGGHGGHPMQHNPNGPPPPWMQPPPPPMNQG--PHPPGH 441
            G G   P   P +   PLP L G   G P    P  P P    PPPPP+     P PP  
Sbjct: 917  GAGIPPPPPLPGAGILPLPPLPG--AGIP----PPPPLPGAAIPPPPPLPGAGIPLPPPL 970

Query: 442  HG----PPPMDQYLGSTP----VGSGVYRLH--QGKGMMPPPPM---GMMPPPPPPPSGQ 488
             G    PPP     G  P     G+G+       G G+ PPPP+   G+ PPPP P +G 
Sbjct: 971  PGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGI 1030

Query: 489  PPPPP----SGPLPPWQQQQQQPPPPPPPSSSMASSTPLPWQQNTTTTTTSAGTGSIPPW 544
            PPPPP      P PP       PPPPP P + +    PLP            G G  PP 
Sbjct: 1031 PPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLP------------GAGIPPPP 1078

Query: 545  QQQQAAAAASPGAPQMQGNPTMVPLPPGVQPPLPP----GAPPPPP------PPPPGSAG 594
                A     P  P   G P   PLP    PP PP    G PPPPP      PPPP   G
Sbjct: 1079 PLPGAGIPPPPPLPG-AGIPPPPPLPGVGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPG 1137

Query: 595  MMYAPPP-------PPPPPMDPSNFVTMMGMGVAGMPP------FGMPPAPP------PP 635
                PPP       PPPPP+  +       +  AG+PP       G+PP PP      PP
Sbjct: 1138 AGIPPPPPLPRVGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGVGIPPPPPLPGVGIPP 1197

Query: 636  PP 637
            PP
Sbjct: 1198 PP 1199



 Score =  130 bits (326), Expect = 5e-30
 Identities = 116/347 (33%), Positives = 131/347 (37%), Gaps = 87/347 (25%)

Query: 324  PVPASVGSTSGPATTPLASA----PRPAAPANNPPPPSLMSTTQSRPPWMNSGPSESRPY 379
            P P  +   + P   PL  A    P P   A  PPPP L       PP +        P 
Sbjct: 943  PPPPPLPGAAIPPPPPLPGAGIPLPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPP- 1001

Query: 380  HGMHGGG----PGGPGGGPHSFPHPLPSLTGGHGGHPMQHNPNGPPPPWMQ----PPPPP 431
              + G G    P  PG G    P P P    G    P       PPPP +     PPPPP
Sbjct: 1002 -PLPGAGIPPPPPLPGAG---IPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPP 1057

Query: 432  MNQGPHPPGHHGPPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPM---GMMPPPPPPPSGQ 488
            +     PP    PPP+                  G G+ PPPP+   G+ PPPP P +G 
Sbjct: 1058 LPGAGIPP----PPPLP-----------------GAGIPPPPPLPGAGIPPPPPLPGAGI 1096

Query: 489  PPPPPSG----PLPPWQQQQQQPPPPPPPSSSMASSTPLPWQQNTTTTTTSAGTGSIPPW 544
            PPPPP      P PP       PPPPP P + +    PLP            G G  PP 
Sbjct: 1097 PPPPPLPGVGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLP------------GAGIPPPP 1144

Query: 545  QQQQAAAAASPGAPQMQGNPTMVPLPPGVQPPLPP----GAPPPPP------PPPPGSAG 594
               +      P  P   G P   PLP    PP PP    G PPPPP      PPPP   G
Sbjct: 1145 PLPRVGIPPPPPLPGA-GIPPPPPLPGAGIPPPPPLPGVGIPPPPPLPGVGIPPPPPLPG 1203

Query: 595  MMYAPPPPPPPPMDPSNFVTMMGMGVAGMPPFGMPPAPPP----PPP 637
                PPPP P            GMG+   PP   PP PPP    PPP
Sbjct: 1204 AGIPPPPPLP------------GMGI---PPAPAPPLPPPGTGIPPP 1235



 Score =  110 bits (276), Expect = 3e-24
 Identities = 100/311 (32%), Positives = 121/311 (38%), Gaps = 53/311 (17%)

Query: 378  PYHGMHGGGPGGPGG--GPHSFPHPLPSLTGGHGGHPMQHNPNGPPPPWMQPPPPPM--- 432
            P  G+ G  P  PG   GP +      SL        +Q + + P     QPPPPP    
Sbjct: 759  PVDGLPGRPPCPPGAESGPQTKFCSEISLIVSPRRISVQLDSHQPTQSISQPPPPPSLLW 818

Query: 433  NQGPHPPGHHGPPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPM------------GMMPP 480
            + G   PG   P  +     ++   S          +  PPP+            GM+PP
Sbjct: 819  SAGQGQPGSQPPHSISTEFQTSHEHSVSSAFKNSCNIPSPPPLPCTESSSSMPGLGMVPP 878

Query: 481  PPPPPSGQPPPP-PSGPLP---PWQQQQQQPPPPPP-PSSSMASSTPLPWQQNTTTTTTS 535
            PPPP  G   P  PS  +P   P Q  +  PPPPPP P + +    PLP           
Sbjct: 879  PPPPLPGMTVPTLPSTAIPQPPPLQGTEMLPPPPPPLPGAGIPPPPPLPGA-GILPLPPL 937

Query: 536  AGTGSIPPWQQQQAAAAASPGAPQMQGNPTMVPLPPGVQPPLPP----GAPPPPP----- 586
             G G  PP     AA    P  P   G P   PLP    PP PP    G PPPPP     
Sbjct: 938  PGAGIPPPPPLPGAAIPPPPPLPGA-GIPLPPPLPGAGIPPPPPLPGAGIPPPPPLPGAG 996

Query: 587  -PPPPGSAGMMYAPPP-------PPPPPMDPSNFVTMMGMGVAGMPP------FGMPPAP 632
             PPPP   G    PPP       PPPPP+  +       +  AG+PP       G+PP P
Sbjct: 997  IPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPP 1056

Query: 633  P------PPPP 637
            P      PPPP
Sbjct: 1057 PLPGAGIPPPP 1067



 Score =  105 bits (261), Expect = 2e-22
 Identities = 105/322 (32%), Positives = 124/322 (38%), Gaps = 60/322 (18%)

Query: 324  PVPASVGSTSGPATTPLASA----PRPAAPANNPPPPSLMSTTQSRPPWMNSGPSESRPY 379
            P+P  +     P   PL  A    P P   A  PPPP L       PP +        P 
Sbjct: 965  PLPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPP- 1023

Query: 380  HGMHGGG----PGGPGGGPHSFPHPLPSLTGGHGGHPMQHNPNGPPPPWMQ----PPPPP 431
              + G G    P  PG G    P P P    G    P       PPPP +     PPPPP
Sbjct: 1024 -PLPGAGIPPPPPLPGAG---IPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPP 1079

Query: 432  MNQG--PHPPGHHG----PPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPM---GMMPPPP 482
            +     P PP   G    PPP    +G  P          G G+ PPPP+   G+ PPPP
Sbjct: 1080 LPGAGIPPPPPLPGAGIPPPPPLPGVGIPPPPP-----LPGAGIPPPPPLPGAGIPPPPP 1134

Query: 483  PPPSGQPPPPPSG----PLPPWQQQQQQPPPPPPPSSSMASSTPLPWQQNTTTTTTSAGT 538
             P +G PPPPP      P PP       PPPPP P + +    PLP            G 
Sbjct: 1135 LPGAGIPPPPPLPRVGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGV-GIPPPPPLPGV 1193

Query: 539  GSIPPWQQQQAAAAASPGAPQMQGNPTMVPLPPGVQPPLPP---GAPPPP------PP-- 587
            G  PP        A  P  P + G    + +PP   PPLPP   G PPPP      PP  
Sbjct: 1194 GIPPP---PPLPGAGIPPPPPLPG----MGIPPAPAPPLPPPGTGIPPPPLLPVSGPPLL 1246

Query: 588  PPPGSAGMM------YAPPPPP 603
            P  GS+ +       + PPP P
Sbjct: 1247 PQVGSSTLPTPQVCGFLPPPLP 1268



 Score = 75.5 bits (184), Expect = 1e-13
 Identities = 76/263 (28%), Positives = 95/263 (36%), Gaps = 107/263 (40%)

Query: 468  GMMPPPPMGMMPPPPP-PPS-----------------------------------GQPPP 491
            G++  PP+  +P  PP PP                                     QPPP
Sbjct: 753  GVLTLPPVDGLPGRPPCPPGAESGPQTKFCSEISLIVSPRRISVQLDSHQPTQSISQPPP 812

Query: 492  PPSGPLPPWQQQQQQPPPPPPPSSS--------------------MASSTPLPWQQNTTT 531
            PPS     W   Q QP   PP S S                    + S  PLP    T +
Sbjct: 813  PPS---LLWSAGQGQPGSQPPHSISTEFQTSHEHSVSSAFKNSCNIPSPPPLPC---TES 866

Query: 532  TTTSAGTGSIPP-------WQQQQAAAAASPGAPQMQGNPTMVPLPP-----GVQPPLP- 578
            +++  G G +PP              + A P  P +QG   + P PP     G+ PP P 
Sbjct: 867  SSSMPGLGMVPPPPPPLPGMTVPTLPSTAIPQPPPLQGTEMLPPPPPPLPGAGIPPPPPL 926

Query: 579  -----------PGAPPPPPPPPPGSAGMMYAPPPPPPP----PMDPSNFVTMMGMGVAGM 623
                       PGA  PPPPP PG+A     PPPPP P    P+ P     + G G+   
Sbjct: 927  PGAGILPLPPLPGAGIPPPPPLPGAA----IPPPPPLPGAGIPLPP----PLPGAGIPPP 978

Query: 624  PPF---GMPPAPP------PPPP 637
            PP    G+PP PP      PPPP
Sbjct: 979  PPLPGAGIPPPPPLPGAGIPPPP 1001


>gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens]
          Length = 416

 Score =  127 bits (319), Expect = 3e-29
 Identities = 113/352 (32%), Positives = 130/352 (36%), Gaps = 55/352 (15%)

Query: 311 KEYLSLMAELGEAPVPASVGSTSGPATTPLASAPRPAAPANNPP-PPSLMSTTQSRPPWM 369
           +E  SL+A   +   P       GP + P      P    N P  PP      Q  PP  
Sbjct: 26  EESPSLIAGNPQGAPPQGGNKPQGPPSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQG 85

Query: 370 NSGPSESRPYHGMHGGGPGGPGGGPHSFPHPLPSLTGGHGGHPMQHNPNGPPP-----PW 424
            + P    P        PG P G P       P              P GPPP     P 
Sbjct: 86  GNKPQGPPP--------PGKPQGPP-------PQGDKSRSPRSPPGKPQGPPPQGGNQPQ 130

Query: 425 MQPPPPPMNQGPHPPGHH---GPPPMDQYLGSTPVGSGVYRLHQ---GKGMMPPPPMGMM 478
             PPPP   QGP P G +   GPPP  +  G  P G    R  +   GK   PPP  G  
Sbjct: 131 GPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSRSSRSPPGKPQGPPPQGGNQ 190

Query: 479 PPPPPPPSGQP--PPP-----PSGPLPPWQQQQQQPPPPPPPSSSMASSTPLPWQQNTTT 531
           P  PPPP G+P  PPP     P GP PP    + Q PPP   + S ++ +P    Q    
Sbjct: 191 PQGPPPPPGKPQGPPPQGGNKPQGPPPP---GKPQGPPPQGDNKSQSARSPPGKPQGPPP 247

Query: 532 TTTSAGTGSIPPWQQQQAAAAASPGAPQMQGNPTMVPLPPG-VQPPLPPG--------AP 582
              +   G  PP  + Q       G P   GN    P PPG  Q P P G        +P
Sbjct: 248 QGGNQPQGPPPPPGKPQ-------GPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSSRSP 300

Query: 583 PPPPPPPPGSAGMMYAPPPPPPPPMDPSNFVTMMGMGVAGMPPFGMPPAPPP 634
           P  P  PP   G    P  PPPPP  P       G    G PP G P  PPP
Sbjct: 301 PGKPQGPPPQGGNQ--PQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPP 350



 Score =  122 bits (307), Expect = 8e-28
 Identities = 114/341 (33%), Positives = 125/341 (36%), Gaps = 74/341 (21%)

Query: 344 PRPAAPANNPPPPSLMSTTQSRPPWMNSGPSESRPYHGMHGGGPGGPGGGPHSFPHPL-- 401
           P P      PPP    S +   PP    GP    P  G    GP  P G P   P P   
Sbjct: 92  PPPPGKPQGPPPQGDKSRSPRSPPGKPQGPP---PQGGNQPQGPPPPPGKPQG-PPPQGG 147

Query: 402 -----PSLTGGHGGHPMQHN------------PNGPPP-----PWMQPPPPPMNQGPHPP 439
                P   G   G P Q +            P GPPP     P   PPPP   QGP P 
Sbjct: 148 NKPQGPPPPGKPQGPPPQGDNKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQ 207

Query: 440 GHH---GPPPMDQYLGSTPVG---SGVYRLHQGKGMMPPPPMGMMPPPPPPPSGQP--PP 491
           G +   GPPP  +  G  P G   S   R   GK   PPP  G  P  PPPP G+P  PP
Sbjct: 208 GGNKPQGPPPPGKPQGPPPQGDNKSQSARSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPP 267

Query: 492 P-----PSGPLPPWQQQQQQPPPPPPPSSSMASSTPLPWQQNTTTTTTSAGTGSIPPWQQ 546
           P     P GP PP + Q    PPP   S S +S +P    Q       +   G  PP  +
Sbjct: 268 PQGGNKPQGPPPPGKPQG---PPPQGGSKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGK 324

Query: 547 QQAAAAASPGAPQMQGNPTMVPLPPGV-QPPLPPG--------APPPPPPPPPGSAGMMY 597
            Q       G P   GN    P PPG  Q P P G        +PP  P  PP   G   
Sbjct: 325 PQ-------GPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSARSPPGKPQGPPQQEGNNP 377

Query: 598 APPPPPP--PPMDPSNFVTMMGMGVAGMPPFGMPPAPPPPP 636
             PPPP    P  P              PP G P  PP PP
Sbjct: 378 QGPPPPAGGNPQQPQ------------APPAGQPQGPPRPP 406



 Score =  103 bits (258), Expect = 4e-22
 Identities = 95/302 (31%), Positives = 105/302 (34%), Gaps = 61/302 (20%)

Query: 322 EAPVPASVGSTSGPATTPLASAPRPAAPANNPPPPSLMSTTQSRPPWMNSGPSESRPYHG 381
           + P P       GP        P P  P   PP     S +   PP    GP    P  G
Sbjct: 140 QGPPPQGGNKPQGP--------PPPGKPQGPPPQGDNKSRSSRSPPGKPQGPP---PQGG 188

Query: 382 MHGGGPGGPGGGPHSFPHPL-------PSLTGGHGGHPMQHN------------PNGPPP 422
               GP  P G P   P P        P   G   G P Q +            P GPPP
Sbjct: 189 NQPQGPPPPPGKPQG-PPPQGGNKPQGPPPPGKPQGPPPQGDNKSQSARSPPGKPQGPPP 247

Query: 423 -----PWMQPPPPPMNQGPHPPGHH---GPPPMDQYLGSTPVGSGVYRLHQ---GKGMMP 471
                P   PPPP   QGP P G +   GPPP  +  G  P G    R  +   GK   P
Sbjct: 248 QGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSSRSPPGKPQGP 307

Query: 472 PPPMGMMPPPPPPPSGQP--PPPPSGPLPPWQQQQQQPPPPPPPSSSMASSTPLPWQQNT 529
           PP  G  P  PPPP G+P  PPP  G  P       +P  PPP   S + S   P     
Sbjct: 308 PPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSARSP----- 362

Query: 530 TTTTTSAGTGSIPPWQQQQAAAAASPGAPQMQGNPTMVPLPPGVQP---PLPPGAPPPPP 586
                  G    PP Q+        P A    GNP     PP  QP   P PP    P  
Sbjct: 363 ------PGKPQGPPQQEGNNPQGPPPPAG---GNPQQPQAPPAGQPQGPPRPPQGGRPSR 413

Query: 587 PP 588
           PP
Sbjct: 414 PP 415



 Score = 80.5 bits (197), Expect = 4e-15
 Identities = 77/239 (32%), Positives = 83/239 (34%), Gaps = 72/239 (30%)

Query: 402 PSLTGGHGGHPMQHNPNGPPPPWMQPPPPPMNQGPHPPGH-HGPPPMDQYLGSTPVGSGV 460
           PSL  G        NP G PP     P  P    P PPG   GPPP     G+ P G   
Sbjct: 29  PSLIAG--------NPQGAPPQGGNKPQGP----PSPPGKPQGPPPQG---GNQPQG--- 70

Query: 461 YRLHQGKGMMPPPPMGMMPPPPPPPSGQPPPPPSGPLPPWQQQQQQPPPPPPPSSSMASS 520
                              PPPPP   Q PPP  G  P      Q PPPP  P       
Sbjct: 71  -------------------PPPPPGKPQGPPPQGGNKP------QGPPPPGKPQG----- 100

Query: 521 TPLPWQQNTTTTTTSAGTGSIPPWQQQQAAAAASPGAPQMQGNPTMVPLPPGVQPPLPPG 580
            P P    + +  +  G    PP Q          G  Q QG P   P P   Q P P G
Sbjct: 101 -PPPQGDKSRSPRSPPGKPQGPPPQ----------GGNQPQGPP---PPPGKPQGPPPQG 146

Query: 581 APPPPPPPPPGSAGMMYAPPPPPPPPMDPSNFVTMMGMGVAGMPP--FGMPPAPPPPPP 637
              P  PPPPG        P  PPP  D  +  +    G    PP   G  P  PPPPP
Sbjct: 147 GNKPQGPPPPGK-------PQGPPPQGDNKSRSSRSPPGKPQGPPPQGGNQPQGPPPPP 198



 Score = 54.3 bits (129), Expect = 3e-07
 Identities = 43/111 (38%), Positives = 47/111 (42%), Gaps = 18/111 (16%)

Query: 545 QQQQAAAAASP-GAPQMQGN-PTMVPLPPGV-QPPLPPGAP----PPPPP-----PPPGS 592
           ++  +  A +P GAP   GN P   P PPG  Q P P G      PPPPP     PPP  
Sbjct: 26  EESPSLIAGNPQGAPPQGGNKPQGPPSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQG 85

Query: 593 AGMMYAPPPP-----PPPPMDPSNFVTMMGMGVAGMPPFG-MPPAPPPPPP 637
                 PPPP     PPP  D S           G PP G   P  PPPPP
Sbjct: 86  GNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPP 136


>gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1
           preproprotein [Homo sapiens]
          Length = 331

 Score =  120 bits (300), Expect = 5e-27
 Identities = 111/347 (31%), Positives = 127/347 (36%), Gaps = 72/347 (20%)

Query: 311 KEYLSLMAELGEAPVPASVGSTSGPATTPLASAPRPAAPANNPPPPSLMSTTQSRPPWMN 370
           +E  SL+A   + P P       GP        P P  P    PPP   +  Q  PP   
Sbjct: 26  EESPSLIAGNPQGPSPQGGNKPQGPP-------PPPGKPQG--PPPQGGNKPQGPPP--- 73

Query: 371 SGPSESRPYHGMHGGGPGGPGGGPHSFPHPLPSLTGGHGGHPMQHNPNGPPPPWMQPPPP 430
            G  +  P  G     P  P G P       P   GG+        P GPPPP  +P  P
Sbjct: 74  PGKPQGPPPQGDKSRSPRSPPGKPQG-----PPPQGGN-------QPQGPPPPPGKPQGP 121

Query: 431 PMNQGPHPPGHHGPPPMDQYLGSTPVG--SGVYRLHQGKGMMPPPPMGMMPPPPPPPSGQ 488
           P   G  P    GPPP  +  G  P G  S   R   GK   PPP  G  P  PPPP G+
Sbjct: 122 PPQGGNRP---QGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGK 178

Query: 489 P--PPP-----PSGPLPPWQQQQQQPPPPPPPSSSMASSTPLPWQQNTTTTTTSAGTGSI 541
           P  PPP     P GP PP + Q     PPP    S +S +P    Q       +   G  
Sbjct: 179 PQGPPPQGGKKPQGPPPPGKPQG----PPPQGDKSRSSQSPPGKPQGPPPQGGNQPQGPP 234

Query: 542 PPWQQQQAAAAASPGAPQMQGNPTMVPLPPGVQPPLPPG----------APPPPPPPPPG 591
           PP  + Q       G P   GN    P PPG +P  PP           +PP  P  PP 
Sbjct: 235 PPPGKPQ-------GPPPQGGNKPQGPPPPG-KPQGPPAQGGSKSQSARSPPGKPQGPPQ 286

Query: 592 SAGMMYAPPPPPP--PPMDPSNFVTMMGMGVAGMPPFGMPPAPPPPP 636
             G     PPPP    P  P              PP G P  PP PP
Sbjct: 287 QEGNNPQGPPPPAGGNPQQPQ------------APPAGQPQGPPRPP 321



 Score = 74.7 bits (182), Expect = 2e-13
 Identities = 77/270 (28%), Positives = 89/270 (32%), Gaps = 57/270 (21%)

Query: 297 PGDPQSAQDKARMDKEYLSLMAELGEAPVPASVGSTSGPATTP------------LASAP 344
           PG PQ    +    +   S   +  + P P       GP   P                P
Sbjct: 74  PGKPQGPPPQGDKSRSPRSPPGK-PQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNRPQGP 132

Query: 345 RPAAPANNPPPPSLMSTTQSRPPWMNSGPSESRPYHGMHGGGPGGPGGGPHSFPHPL--- 401
            P      PPP    S +   PP    GP    P  G    GP  P G P   P P    
Sbjct: 133 PPPGKPQGPPPQGDKSRSPRSPPGKPQGPP---PQGGNQPQGPPPPPGKPQG-PPPQGGK 188

Query: 402 ----PSLTGGHGGHPMQHN-----------PNGPPP-----PWMQPPPPPMNQGPHPPGH 441
               P   G   G P Q +           P GPPP     P   PPPP   QGP P G 
Sbjct: 189 KPQGPPPPGKPQGPPPQGDKSRSSQSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGG 248

Query: 442 H---GPPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPMGMMPPPPPPPSGQPPPPPSGPLP 498
           +   GPPP  +  G    G       + +    PP     PP     + Q PPPP+G  P
Sbjct: 249 NKPQGPPPPGKPQGPPAQGGS-----KSQSARSPPGKPQGPPQQEGNNPQGPPPPAGGNP 303

Query: 499 PWQQQQQQPP------PPPPPSSSMASSTP 522
              QQ Q PP      PP PP     S  P
Sbjct: 304 ---QQPQAPPAGQPQGPPRPPQGGRPSRPP 330


>gi|116284398 WAS/WASL interacting protein family, member 1 [Homo
           sapiens]
          Length = 503

 Score =  116 bits (290), Expect = 7e-26
 Identities = 107/337 (31%), Positives = 129/337 (38%), Gaps = 71/337 (21%)

Query: 321 GEAPVPASVGSTSGPATTPLASAPRPAAPANNPPPPSLMSTTQSRPPWMNSGPS--ESRP 378
           G  PVP S G  SGP        P P      PP P + S   S PP + S P   +S P
Sbjct: 148 GRFPVP-SPGHRSGP--------PEPQRNRMPPPRPDVGSKPDSIPPPVPSTPRPIQSSP 198

Query: 379 YHGMHGGGPGGP-GGGPHSFPHPLPSLTG-GHGGHPMQHNPNGPPPPWMQPPPPPMNQGP 436
           ++      PGGP    P   P P P   G   GG  ++ +P     P+   PP P    P
Sbjct: 199 HNRGSPPVPGGPRQPSPGPTPPPFPGNRGTALGGGSIRQSPLSSSSPFSNRPPLPPT--P 256

Query: 437 HPPGHHGPPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPMGMMPP------PPPPPSGQPP 490
                  PPP                        PPPP+G  P       PPPPP    P
Sbjct: 257 SRALDDKPPP------------------------PPPPVGNRPSIHREAVPPPPPQNNKP 292

Query: 491 PPPSGPLPPWQQQQQQPPPPPPPSSSMASSTPLPWQQNTTTTTTSAGTGSIPPWQQQQAA 550
           P PS P P      Q PPPPPPP  S     PLP         +S+G    P   Q+  +
Sbjct: 293 PVPSTPRP--SASSQAPPPPPPP--SRPGPPPLP--------PSSSGNDETPRLPQRNLS 340

Query: 551 AAASPGAPQMQGNPTMVPLPPGVQPPL----PPGAPPPPPPPPPGSAGMMYAPPPPPPPP 606
            ++S       G    +P PP  +PP     PPG   P PPPPP S     +   P  P 
Sbjct: 341 LSSSTPPLPSPGRSGPLPPPPSERPPPPVRDPPGRSGPLPPPPPVSRNGSTSRALPATPQ 400

Query: 607 MDPSNFVTMMGMGVAGMPPFGMPP------APPPPPP 637
           +   + V     G    PP  +PP      APPPPPP
Sbjct: 401 LPSRSGVDSPRSG--PRPP--LPPDRPSAGAPPPPPP 433



 Score = 89.0 bits (219), Expect = 1e-17
 Identities = 99/361 (27%), Positives = 120/361 (33%), Gaps = 104/361 (28%)

Query: 346 PAAPANNPPPPSLMSTTQSRPPWMN----------------------------SGPSESR 377
           P  P   PPPP   +   +  P +N                            S P   +
Sbjct: 2   PVPPPPAPPPPPTFALANTEKPTLNKTEQAGRNALLSDISKGKKLKKTVTNDRSAPILDK 61

Query: 378 P-----------YHGMHGGGPGGPGGGPHSFPHPLPSLTGG--HGGHPM------QHNPN 418
           P           + G  G G GG GGG  SF    P   GG    G P       + N +
Sbjct: 62  PKGAGAGGGGGGFGGGGGFGGGGGGGGGGSFGGGGPPGLGGLFQAGMPKLRSTANRDNDS 121

Query: 419 GPPPPWMQPP----------PPPMNQGPHP---PGHHGPPPMDQYLGSTPVGSGVYRLHQ 465
           G   P + PP           PP   G  P   PGH   PP  Q                
Sbjct: 122 GGSRPPLLPPGGRSTSAKPFSPPSGPGRFPVPSPGHRSGPPEPQ---------------- 165

Query: 466 GKGMMPPPPMGMMPPPPPPPSGQPPPPPSGPLPPWQQQQQQPPPPPP--PSSSMASSTPL 523
            +  MPPP     P     P   PPP PS P P       +  PP P  P       TP 
Sbjct: 166 -RNRMPPP----RPDVGSKPDSIPPPVPSTPRPIQSSPHNRGSPPVPGGPRQPSPGPTPP 220

Query: 524 PWQQNTTTTTTSAGTGSIPPWQQQQAAAAASPGAPQMQGNPTMVPLPPGVQPPLPPGAPP 583
           P+  N  T   + G GSI    +Q   +++SP        P   PLPP   P       P
Sbjct: 221 PFPGNRGT---ALGGGSI----RQSPLSSSSP----FSNRP---PLPP--TPSRALDDKP 264

Query: 584 PPPPPPPGSAGMMYAPPPPPPPPMD-----PSNFVTMMGMGVAGMPPFGMPPAPPPPPPQ 638
           PPPPPP G+   ++    PPPPP +     PS             PP    P PPP PP 
Sbjct: 265 PPPPPPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAPPPPPPPSRPGPPPLPPS 324

Query: 639 N 639
           +
Sbjct: 325 S 325



 Score = 68.9 bits (167), Expect = 1e-11
 Identities = 87/343 (25%), Positives = 105/343 (30%), Gaps = 100/343 (29%)

Query: 324 PVPASVGSTSGPATTPLASAPRP--AAPANNPPPPSLMSTTQSRPPWMNSGPSESRPYHG 381
           P    VGS       P+ S PRP  ++P N   PP      Q  P     GP+   P+ G
Sbjct: 171 PPRPDVGSKPDSIPPPVPSTPRPIQSSPHNRGSPPVPGGPRQPSP-----GPTPP-PFPG 224

Query: 382 MHGGGPGG--------PGGGPHSFPHPLPSLTGGHGGHPMQHNPNGPPPPWMQ------- 426
             G   GG            P S   PLP          +   P  PPPP          
Sbjct: 225 NRGTALGGGSIRQSPLSSSSPFSNRPPLPPTPS----RALDDKPPPPPPPVGNRPSIHRE 280

Query: 427 --PPPPPMNQGPH------------------PPGHHGPPPMDQYLGSTPVGSGVYRLHQG 466
             PPPPP N  P                   PP   GPPP+     S+       RL Q 
Sbjct: 281 AVPPPPPQNNKPPVPSTPRPSASSQAPPPPPPPSRPGPPPLPP---SSSGNDETPRLPQR 337

Query: 467 K----------------GMMPPPPMGMMPPP---PPPPSGQPPPPP-------------- 493
                            G +PPPP    PPP   PP  SG  PPPP              
Sbjct: 338 NLSLSSSTPPLPSPGRSGPLPPPPSERPPPPVRDPPGRSGPLPPPPPVSRNGSTSRALPA 397

Query: 494 --------------SGP---LPPWQQQQQQPPPPPPPSSSMASSTPLPWQQNTTTTTTSA 536
                         SGP   LPP +     PPPPPP +S        P +    +     
Sbjct: 398 TPQLPSRSGVDSPRSGPRPPLPPDRPSAGAPPPPPPSTSIRNGFQDSPCEDEWESRFYFH 457

Query: 537 GTGSIPPWQQQQAAAAASPGAPQMQGNPTMVPLPPGVQPPLPP 579
               +PP +       + P       + +         PPLPP
Sbjct: 458 PISDLPPPEPYVQTTKSYPSKLARNESRSGSNRRERGAPPLPP 500


>gi|38373695 WAS/WASL interacting protein family, member 1 [Homo
           sapiens]
          Length = 503

 Score =  116 bits (290), Expect = 7e-26
 Identities = 107/337 (31%), Positives = 129/337 (38%), Gaps = 71/337 (21%)

Query: 321 GEAPVPASVGSTSGPATTPLASAPRPAAPANNPPPPSLMSTTQSRPPWMNSGPS--ESRP 378
           G  PVP S G  SGP        P P      PP P + S   S PP + S P   +S P
Sbjct: 148 GRFPVP-SPGHRSGP--------PEPQRNRMPPPRPDVGSKPDSIPPPVPSTPRPIQSSP 198

Query: 379 YHGMHGGGPGGP-GGGPHSFPHPLPSLTG-GHGGHPMQHNPNGPPPPWMQPPPPPMNQGP 436
           ++      PGGP    P   P P P   G   GG  ++ +P     P+   PP P    P
Sbjct: 199 HNRGSPPVPGGPRQPSPGPTPPPFPGNRGTALGGGSIRQSPLSSSSPFSNRPPLPPT--P 256

Query: 437 HPPGHHGPPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPMGMMPP------PPPPPSGQPP 490
                  PPP                        PPPP+G  P       PPPPP    P
Sbjct: 257 SRALDDKPPP------------------------PPPPVGNRPSIHREAVPPPPPQNNKP 292

Query: 491 PPPSGPLPPWQQQQQQPPPPPPPSSSMASSTPLPWQQNTTTTTTSAGTGSIPPWQQQQAA 550
           P PS P P      Q PPPPPPP  S     PLP         +S+G    P   Q+  +
Sbjct: 293 PVPSTPRP--SASSQAPPPPPPP--SRPGPPPLP--------PSSSGNDETPRLPQRNLS 340

Query: 551 AAASPGAPQMQGNPTMVPLPPGVQPPL----PPGAPPPPPPPPPGSAGMMYAPPPPPPPP 606
            ++S       G    +P PP  +PP     PPG   P PPPPP S     +   P  P 
Sbjct: 341 LSSSTPPLPSPGRSGPLPPPPSERPPPPVRDPPGRSGPLPPPPPVSRNGSTSRALPATPQ 400

Query: 607 MDPSNFVTMMGMGVAGMPPFGMPP------APPPPPP 637
           +   + V     G    PP  +PP      APPPPPP
Sbjct: 401 LPSRSGVDSPRSG--PRPP--LPPDRPSAGAPPPPPP 433



 Score = 89.0 bits (219), Expect = 1e-17
 Identities = 99/361 (27%), Positives = 120/361 (33%), Gaps = 104/361 (28%)

Query: 346 PAAPANNPPPPSLMSTTQSRPPWMN----------------------------SGPSESR 377
           P  P   PPPP   +   +  P +N                            S P   +
Sbjct: 2   PVPPPPAPPPPPTFALANTEKPTLNKTEQAGRNALLSDISKGKKLKKTVTNDRSAPILDK 61

Query: 378 P-----------YHGMHGGGPGGPGGGPHSFPHPLPSLTGG--HGGHPM------QHNPN 418
           P           + G  G G GG GGG  SF    P   GG    G P       + N +
Sbjct: 62  PKGAGAGGGGGGFGGGGGFGGGGGGGGGGSFGGGGPPGLGGLFQAGMPKLRSTANRDNDS 121

Query: 419 GPPPPWMQPP----------PPPMNQGPHP---PGHHGPPPMDQYLGSTPVGSGVYRLHQ 465
           G   P + PP           PP   G  P   PGH   PP  Q                
Sbjct: 122 GGSRPPLLPPGGRSTSAKPFSPPSGPGRFPVPSPGHRSGPPEPQ---------------- 165

Query: 466 GKGMMPPPPMGMMPPPPPPPSGQPPPPPSGPLPPWQQQQQQPPPPPP--PSSSMASSTPL 523
            +  MPPP     P     P   PPP PS P P       +  PP P  P       TP 
Sbjct: 166 -RNRMPPP----RPDVGSKPDSIPPPVPSTPRPIQSSPHNRGSPPVPGGPRQPSPGPTPP 220

Query: 524 PWQQNTTTTTTSAGTGSIPPWQQQQAAAAASPGAPQMQGNPTMVPLPPGVQPPLPPGAPP 583
           P+  N  T   + G GSI    +Q   +++SP        P   PLPP   P       P
Sbjct: 221 PFPGNRGT---ALGGGSI----RQSPLSSSSP----FSNRP---PLPP--TPSRALDDKP 264

Query: 584 PPPPPPPGSAGMMYAPPPPPPPPMD-----PSNFVTMMGMGVAGMPPFGMPPAPPPPPPQ 638
           PPPPPP G+   ++    PPPPP +     PS             PP    P PPP PP 
Sbjct: 265 PPPPPPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAPPPPPPPSRPGPPPLPPS 324

Query: 639 N 639
           +
Sbjct: 325 S 325



 Score = 68.9 bits (167), Expect = 1e-11
 Identities = 87/343 (25%), Positives = 105/343 (30%), Gaps = 100/343 (29%)

Query: 324 PVPASVGSTSGPATTPLASAPRP--AAPANNPPPPSLMSTTQSRPPWMNSGPSESRPYHG 381
           P    VGS       P+ S PRP  ++P N   PP      Q  P     GP+   P+ G
Sbjct: 171 PPRPDVGSKPDSIPPPVPSTPRPIQSSPHNRGSPPVPGGPRQPSP-----GPTPP-PFPG 224

Query: 382 MHGGGPGG--------PGGGPHSFPHPLPSLTGGHGGHPMQHNPNGPPPPWMQ------- 426
             G   GG            P S   PLP          +   P  PPPP          
Sbjct: 225 NRGTALGGGSIRQSPLSSSSPFSNRPPLPPTPS----RALDDKPPPPPPPVGNRPSIHRE 280

Query: 427 --PPPPPMNQGPH------------------PPGHHGPPPMDQYLGSTPVGSGVYRLHQG 466
             PPPPP N  P                   PP   GPPP+     S+       RL Q 
Sbjct: 281 AVPPPPPQNNKPPVPSTPRPSASSQAPPPPPPPSRPGPPPLPP---SSSGNDETPRLPQR 337

Query: 467 K----------------GMMPPPPMGMMPPP---PPPPSGQPPPPP-------------- 493
                            G +PPPP    PPP   PP  SG  PPPP              
Sbjct: 338 NLSLSSSTPPLPSPGRSGPLPPPPSERPPPPVRDPPGRSGPLPPPPPVSRNGSTSRALPA 397

Query: 494 --------------SGP---LPPWQQQQQQPPPPPPPSSSMASSTPLPWQQNTTTTTTSA 536
                         SGP   LPP +     PPPPPP +S        P +    +     
Sbjct: 398 TPQLPSRSGVDSPRSGPRPPLPPDRPSAGAPPPPPPSTSIRNGFQDSPCEDEWESRFYFH 457

Query: 537 GTGSIPPWQQQQAAAAASPGAPQMQGNPTMVPLPPGVQPPLPP 579
               +PP +       + P       + +         PPLPP
Sbjct: 458 PISDLPPPEPYVQTTKSYPSKLARNESRSGSNRRERGAPPLPP 500


>gi|112382226 atrophin-1 like protein isoform b [Homo sapiens]
          Length = 1012

 Score =  115 bits (289), Expect = 9e-26
 Identities = 124/500 (24%), Positives = 179/500 (35%), Gaps = 58/500 (11%)

Query: 178 RGKGSVKEGKVGRK------DGQMLP--------GEDEPLHALVTANTM--ENVKKAVEQ 221
           R +GS+   + GRK      DG+  P        G + P  A  ++N    E VKK+ ++
Sbjct: 22  RSRGSMSTLRSGRKKQPASPDGRTSPINEDIRSSGRNSPSAASTSSNDSKAETVKKSAKK 81

Query: 222 IRNILKQGIETPEDQNDLRKMQLRELARLNGTLREDDNRILRPWQSSETRSITNTTVCTK 281
           ++      +++ + Q +       E  R +   +     I RP   SE    ++ +    
Sbjct: 82  VKEEASSPLKSNKRQREKVASDTEEADRTSSK-KTKTQEISRPNSPSEGEGESSDSRSVN 140

Query: 282 CGGAGH---IASDCKFQRPGDPQSAQDKARMD----KEYLSLMAELGEAPVPASVGSTSG 334
             G+     I  D +   P  P    +++  D    ++ L       +AP   +   +S 
Sbjct: 141 DEGSSDPKDIDQDNRSTSPSIPSPQDNESDSDSSAQQQMLQAQPPALQAPTGVTPAPSSA 200

Query: 335 PATTPLASAPRPAAPANNPPPPSLMSTTQSRPPWMNSGPSESRPYH------GMHGGGPG 388
           P  TP    P P   A   PP    S T S+ P     P+   P+        +H   P 
Sbjct: 201 PPGTPQLPTPGPTPSATAVPPQG--SPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRPP 258

Query: 389 GPGGGPHSFPHPLPSLTGGHGGHPMQHNPNGPPPPWMQPPPP------PMNQGPHPPGHH 442
            P   PH  PHP      G  G P   +   PP     PP P      P+ Q P PP   
Sbjct: 259 SPHPPPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHGQGPPGPHSLQAGPLLQHPGPPQPF 318

Query: 443 GPPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPMGMMP--------PPPPPPSGQP--PPP 492
           G PP     G  P+G+     +    +  P     +         P PP P   P   PP
Sbjct: 319 GLPPQASQ-GQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQPLPPAPLAMPHIKPP 377

Query: 493 PSGPLPPWQQQQQQPPPP----PPPSSSMASSTPLPWQQNTTTTTTSAGTGSIPPWQQ-- 546
           P+ P+P     Q    PP    P P S  A+  P P  +  ++ +T     + PP  Q  
Sbjct: 378 PTTPIPQLPAPQAHKHPPHLSGPSPFSMNANLPPPPALKPLSSLSTHHPPSAHPPPLQLM 437

Query: 547 -QQAAAAASPGAPQMQGNPTMVPLPPGVQPPLPPGAPPPPPPPPPGSAGMMYAPPPPPPP 605
            Q     +SP  P        +P PP   PP   G     P PP      +   PPP  P
Sbjct: 438 PQSQPLPSSPAQPPGLTQSQNLPPPPASHPPT--GLHQVAPQPPFAQHPFVPGGPPPITP 495

Query: 606 PMDPSNFVTMMGMGVAGMPP 625
           P  PS      G G +  PP
Sbjct: 496 PTCPSTSTPPAGPGTSAQPP 515



 Score = 57.0 bits (136), Expect = 5e-08
 Identities = 58/193 (30%), Positives = 70/193 (36%), Gaps = 38/193 (19%)

Query: 444 PPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPMGMMPPPPPPPSGQPPPPPSGPLPPWQQQ 503
           P P D    S    S   ++ Q +      P G+ P P   P G P  P  GP P     
Sbjct: 162 PSPQDNESDSD--SSAQQQMLQAQPPALQAPTGVTPAPSSAPPGTPQLPTPGPTP----S 215

Query: 504 QQQPPPPPPPSSSMASSTPLPWQQNTTTTTTSAGTGSIPPWQQQQAAAAASPGAPQMQGN 563
               PP   P++S A + P             A T  +P    QQA A      PQ    
Sbjct: 216 ATAVPPQGSPTASQAPNQP------------QAPTAPVPHTHIQQAPALH----PQR--- 256

Query: 564 PTMVPLPPGVQPPLPPGAPPPPPPPPPGSAGMMYAPPPPPPP-----PMDPSNFVTMMGM 618
                 PP   PP P  +P PP  P  GSAG   AP    PP     P  P +      +
Sbjct: 257 ------PPSPHPP-PHPSPHPPLQPLTGSAGQPSAPSHAQPPLHGQGPPGPHSLQAGPLL 309

Query: 619 GVAGMP-PFGMPP 630
              G P PFG+PP
Sbjct: 310 QHPGPPQPFGLPP 322


>gi|112382224 atrophin-1 like protein isoform a [Homo sapiens]
          Length = 1566

 Score =  115 bits (289), Expect = 9e-26
 Identities = 124/500 (24%), Positives = 179/500 (35%), Gaps = 58/500 (11%)

Query: 178  RGKGSVKEGKVGRK------DGQMLP--------GEDEPLHALVTANTM--ENVKKAVEQ 221
            R +GS+   + GRK      DG+  P        G + P  A  ++N    E VKK+ ++
Sbjct: 576  RSRGSMSTLRSGRKKQPASPDGRTSPINEDIRSSGRNSPSAASTSSNDSKAETVKKSAKK 635

Query: 222  IRNILKQGIETPEDQNDLRKMQLRELARLNGTLREDDNRILRPWQSSETRSITNTTVCTK 281
            ++      +++ + Q +       E  R +   +     I RP   SE    ++ +    
Sbjct: 636  VKEEASSPLKSNKRQREKVASDTEEADRTSSK-KTKTQEISRPNSPSEGEGESSDSRSVN 694

Query: 282  CGGAGH---IASDCKFQRPGDPQSAQDKARMD----KEYLSLMAELGEAPVPASVGSTSG 334
              G+     I  D +   P  P    +++  D    ++ L       +AP   +   +S 
Sbjct: 695  DEGSSDPKDIDQDNRSTSPSIPSPQDNESDSDSSAQQQMLQAQPPALQAPTGVTPAPSSA 754

Query: 335  PATTPLASAPRPAAPANNPPPPSLMSTTQSRPPWMNSGPSESRPYH------GMHGGGPG 388
            P  TP    P P   A   PP    S T S+ P     P+   P+        +H   P 
Sbjct: 755  PPGTPQLPTPGPTPSATAVPPQG--SPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRPP 812

Query: 389  GPGGGPHSFPHPLPSLTGGHGGHPMQHNPNGPPPPWMQPPPP------PMNQGPHPPGHH 442
             P   PH  PHP      G  G P   +   PP     PP P      P+ Q P PP   
Sbjct: 813  SPHPPPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHGQGPPGPHSLQAGPLLQHPGPPQPF 872

Query: 443  GPPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPMGMMP--------PPPPPPSGQP--PPP 492
            G PP     G  P+G+     +    +  P     +         P PP P   P   PP
Sbjct: 873  GLPPQASQ-GQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQPLPPAPLAMPHIKPP 931

Query: 493  PSGPLPPWQQQQQQPPPP----PPPSSSMASSTPLPWQQNTTTTTTSAGTGSIPPWQQ-- 546
            P+ P+P     Q    PP    P P S  A+  P P  +  ++ +T     + PP  Q  
Sbjct: 932  PTTPIPQLPAPQAHKHPPHLSGPSPFSMNANLPPPPALKPLSSLSTHHPPSAHPPPLQLM 991

Query: 547  -QQAAAAASPGAPQMQGNPTMVPLPPGVQPPLPPGAPPPPPPPPPGSAGMMYAPPPPPPP 605
             Q     +SP  P        +P PP   PP   G     P PP      +   PPP  P
Sbjct: 992  PQSQPLPSSPAQPPGLTQSQNLPPPPASHPPT--GLHQVAPQPPFAQHPFVPGGPPPITP 1049

Query: 606  PMDPSNFVTMMGMGVAGMPP 625
            P  PS      G G +  PP
Sbjct: 1050 PTCPSTSTPPAGPGTSAQPP 1069



 Score = 57.0 bits (136), Expect = 5e-08
 Identities = 58/193 (30%), Positives = 70/193 (36%), Gaps = 38/193 (19%)

Query: 444 PPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPMGMMPPPPPPPSGQPPPPPSGPLPPWQQQ 503
           P P D    S    S   ++ Q +      P G+ P P   P G P  P  GP P     
Sbjct: 716 PSPQDNESDSD--SSAQQQMLQAQPPALQAPTGVTPAPSSAPPGTPQLPTPGPTP----S 769

Query: 504 QQQPPPPPPPSSSMASSTPLPWQQNTTTTTTSAGTGSIPPWQQQQAAAAASPGAPQMQGN 563
               PP   P++S A + P             A T  +P    QQA A      PQ    
Sbjct: 770 ATAVPPQGSPTASQAPNQP------------QAPTAPVPHTHIQQAPALH----PQR--- 810

Query: 564 PTMVPLPPGVQPPLPPGAPPPPPPPPPGSAGMMYAPPPPPPP-----PMDPSNFVTMMGM 618
                 PP   PP P  +P PP  P  GSAG   AP    PP     P  P +      +
Sbjct: 811 ------PPSPHPP-PHPSPHPPLQPLTGSAGQPSAPSHAQPPLHGQGPPGPHSLQAGPLL 863

Query: 619 GVAGMP-PFGMPP 630
              G P PFG+PP
Sbjct: 864 QHPGPPQPFGLPP 876


>gi|112382216 atrophin-1 like protein isoform a [Homo sapiens]
          Length = 1566

 Score =  115 bits (289), Expect = 9e-26
 Identities = 124/500 (24%), Positives = 179/500 (35%), Gaps = 58/500 (11%)

Query: 178  RGKGSVKEGKVGRK------DGQMLP--------GEDEPLHALVTANTM--ENVKKAVEQ 221
            R +GS+   + GRK      DG+  P        G + P  A  ++N    E VKK+ ++
Sbjct: 576  RSRGSMSTLRSGRKKQPASPDGRTSPINEDIRSSGRNSPSAASTSSNDSKAETVKKSAKK 635

Query: 222  IRNILKQGIETPEDQNDLRKMQLRELARLNGTLREDDNRILRPWQSSETRSITNTTVCTK 281
            ++      +++ + Q +       E  R +   +     I RP   SE    ++ +    
Sbjct: 636  VKEEASSPLKSNKRQREKVASDTEEADRTSSK-KTKTQEISRPNSPSEGEGESSDSRSVN 694

Query: 282  CGGAGH---IASDCKFQRPGDPQSAQDKARMD----KEYLSLMAELGEAPVPASVGSTSG 334
              G+     I  D +   P  P    +++  D    ++ L       +AP   +   +S 
Sbjct: 695  DEGSSDPKDIDQDNRSTSPSIPSPQDNESDSDSSAQQQMLQAQPPALQAPTGVTPAPSSA 754

Query: 335  PATTPLASAPRPAAPANNPPPPSLMSTTQSRPPWMNSGPSESRPYH------GMHGGGPG 388
            P  TP    P P   A   PP    S T S+ P     P+   P+        +H   P 
Sbjct: 755  PPGTPQLPTPGPTPSATAVPPQG--SPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRPP 812

Query: 389  GPGGGPHSFPHPLPSLTGGHGGHPMQHNPNGPPPPWMQPPPP------PMNQGPHPPGHH 442
             P   PH  PHP      G  G P   +   PP     PP P      P+ Q P PP   
Sbjct: 813  SPHPPPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHGQGPPGPHSLQAGPLLQHPGPPQPF 872

Query: 443  GPPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPMGMMP--------PPPPPPSGQP--PPP 492
            G PP     G  P+G+     +    +  P     +         P PP P   P   PP
Sbjct: 873  GLPPQASQ-GQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQPLPPAPLAMPHIKPP 931

Query: 493  PSGPLPPWQQQQQQPPPP----PPPSSSMASSTPLPWQQNTTTTTTSAGTGSIPPWQQ-- 546
            P+ P+P     Q    PP    P P S  A+  P P  +  ++ +T     + PP  Q  
Sbjct: 932  PTTPIPQLPAPQAHKHPPHLSGPSPFSMNANLPPPPALKPLSSLSTHHPPSAHPPPLQLM 991

Query: 547  -QQAAAAASPGAPQMQGNPTMVPLPPGVQPPLPPGAPPPPPPPPPGSAGMMYAPPPPPPP 605
             Q     +SP  P        +P PP   PP   G     P PP      +   PPP  P
Sbjct: 992  PQSQPLPSSPAQPPGLTQSQNLPPPPASHPPT--GLHQVAPQPPFAQHPFVPGGPPPITP 1049

Query: 606  PMDPSNFVTMMGMGVAGMPP 625
            P  PS      G G +  PP
Sbjct: 1050 PTCPSTSTPPAGPGTSAQPP 1069



 Score = 57.0 bits (136), Expect = 5e-08
 Identities = 58/193 (30%), Positives = 70/193 (36%), Gaps = 38/193 (19%)

Query: 444 PPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPMGMMPPPPPPPSGQPPPPPSGPLPPWQQQ 503
           P P D    S    S   ++ Q +      P G+ P P   P G P  P  GP P     
Sbjct: 716 PSPQDNESDSD--SSAQQQMLQAQPPALQAPTGVTPAPSSAPPGTPQLPTPGPTP----S 769

Query: 504 QQQPPPPPPPSSSMASSTPLPWQQNTTTTTTSAGTGSIPPWQQQQAAAAASPGAPQMQGN 563
               PP   P++S A + P             A T  +P    QQA A      PQ    
Sbjct: 770 ATAVPPQGSPTASQAPNQP------------QAPTAPVPHTHIQQAPALH----PQR--- 810

Query: 564 PTMVPLPPGVQPPLPPGAPPPPPPPPPGSAGMMYAPPPPPPP-----PMDPSNFVTMMGM 618
                 PP   PP P  +P PP  P  GSAG   AP    PP     P  P +      +
Sbjct: 811 ------PPSPHPP-PHPSPHPPLQPLTGSAGQPSAPSHAQPPLHGQGPPGPHSLQAGPLL 863

Query: 619 GVAGMP-PFGMPP 630
              G P PFG+PP
Sbjct: 864 QHPGPPQPFGLPP 876


>gi|42544127 splicing factor 1 isoform 4 [Homo sapiens]
          Length = 80

 Score =  112 bits (281), Expect = 8e-25
 Identities = 56/68 (82%), Positives = 59/68 (86%), Gaps = 6/68 (8%)

Query: 1  MATGANATPLDFPSKKRKRSRWNQDTMEQKTVIPGMPTVIPPGLTREQERAYI------V 54
          MATGANATPLDFPSKKRKRSRWNQDTMEQKTVIPGMPTVIPPGLTREQERAYI      +
Sbjct: 1  MATGANATPLDFPSKKRKRSRWNQDTMEQKTVIPGMPTVIPPGLTREQERAYIGKYTFCI 60

Query: 55 QLQIEDLT 62
          Q+  E +T
Sbjct: 61 QMHFEIVT 68


>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
           sapiens]
          Length = 1124

 Score =  112 bits (279), Expect = 1e-24
 Identities = 110/369 (29%), Positives = 135/369 (36%), Gaps = 77/369 (20%)

Query: 327 ASVGSTSGPATTPLASAPRPAAPANNPPPPSLMSTTQSRPPWMNSGPSESRPYHGMHGGG 386
           AS+ S S PA+TP  S P  A  +    PP   S + +  P   S P    P   +    
Sbjct: 439 ASLTSPSRPASTPPDSPPLQAPLSLPASPPLQTSLSPAVSPL--SSPLTIHPLQALSSLA 496

Query: 387 PGGPGG----------------GPHSFPHPLPSLTGGHGGHPMQHNPN-GPPP------- 422
              P                   P S   P  SLT      P+++ P+  PPP       
Sbjct: 497 SHSPQAPLSSLIMPPLETQSSLAPPSLQTPPASLT----TPPLENLPSLAPPPLQTASAP 552

Query: 423 ---PWMQPPPPPMN---QGPHPPGHHGPPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPMG 476
              P ++ PP P     Q P  P    PP     + + P         Q    +  PP+ 
Sbjct: 553 LTTPHLETPPCPAPCPLQAPPSPLTTPPPETPSSIATPP--------PQAPPALASPPLQ 604

Query: 477 MMPPPPPPPSGQPPP--PPSGPLPPWQQQQQQPPPPP--PPSSSMASSTPLPWQQNTTTT 532
            +P PP  P   PPP  PP   LPP     Q PP PP  PP S +A  TP P   N    
Sbjct: 605 GLPSPPLSPLATPPPQAPPXLALPP----LQAPPSPPASPPLSPLA--TPSPQAPNALAV 658

Query: 533 TTSAGTGSIPPWQQQQA-------------AAAASPGAPQMQGNPTMVPLPPGVQPPLPP 579
                  S PP    QA             A   S   P +   P  VP  P   PP+ P
Sbjct: 659 HLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSP 718

Query: 580 GAPPPPPPPPPGSAGMMYAPP-PPPPPPMDPSNFVTMMGMGVAGMPPFGMPPAPP----- 633
            A PPP  PPP +A  +  PP PP  PPM PS         +   PP  +PP+PP     
Sbjct: 719 SATPPPQAPPPLAAPPLQVPPSPPASPPMSPSATPPPRVPPLLAAPPLQVPPSPPASLPM 778

Query: 634 ----PPPPQ 638
                PPPQ
Sbjct: 779 SPLAKPPPQ 787



 Score =  103 bits (256), Expect = 6e-22
 Identities = 98/352 (27%), Positives = 123/352 (34%), Gaps = 45/352 (12%)

Query: 326 PASVGSTSGPATTPLASAPRPAAPANNPPPPSLMSTTQSRPPWMNSGPSESRPYHGMHGG 385
           P  + + S P TTP    P   AP     PPS ++T     P   + P    P       
Sbjct: 543 PPPLQTASAPLTTPHLETPPCPAPCPLQAPPSPLTTPPPETPSSIATPPPQAPPALASPP 602

Query: 386 GPGGPGGGPHSFPHPLPSLTGGHGGHPMQHNPNGPPPPWMQPPPPPMNQGPHPPGHH--- 442
             G P         P P         P+Q  P+ P  P + P   P  Q P+    H   
Sbjct: 603 LQGLPSPPLSPLATPPPQAPPXLALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQ 662

Query: 443 ---GPPPMDQYLG------STPVGSGVYRLHQGKGMMPPPPMGMMPPPP--PPPSGQPPP 491
               PPP            S PV        Q    +  PP+ + P PP  PP S    P
Sbjct: 663 APFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATP 722

Query: 492 PPSGPLPPWQQQQQQPPPPPPPSSSMA-SSTPLPWQQNTTTTTTSAGTGSIPPWQQQQAA 550
           PP  P PP      Q PP PP S  M+ S+TP P               S P        
Sbjct: 723 PPQAP-PPLAAPPLQVPPSPPASPPMSPSATPPPRVPPLLAAPPLQVPPSPPASLPMSPL 781

Query: 551 AAASPGAPQMQGNPTMVPLP------PGVQP-------PLPPGAPPPPPPPPPGSAGMMY 597
           A   P AP     P +  LP      PG  P       P+ P A PPP  PP  +A ++ 
Sbjct: 782 AKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQ 841

Query: 598 APPPPP----------PPPMDPSNFVTMMGMGVAGMPPFGMPPAPPPPPPQN 639
            PP PP          PP   P   V+   + +A      + P PPPPP ++
Sbjct: 842 VPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLA------LAPGPPPPPSRS 887



 Score = 92.0 bits (227), Expect = 1e-18
 Identities = 97/338 (28%), Positives = 129/338 (38%), Gaps = 63/338 (18%)

Query: 326 PASVGSTSGPATTPLASAPRPAAPANNPPPPSLMSTTQSRPPWMNSGPSESRPYHGMHGG 385
           P+S+ +    A   LAS P    P+  PP   L +     PP +   P ++ P       
Sbjct: 584 PSSIATPPPQAPPALASPPLQGLPS--PPLSPLATPPPQAPPXLALPPLQAPP------S 635

Query: 386 GPGGPGGGPHSFPHP-LPSLTGGHGGHPMQHNPNGPPP------PWMQPPPPPMNQGPHP 438
            P  P   P + P P  P+    H    +   P  PPP      P+  P  PP++    P
Sbjct: 636 PPASPPLSPLATPSPQAPNALAVH----LLQAPFSPPPSPPVQAPFSPPASPPVSPSATP 691

Query: 439 PGHHGP----PPMD---QYLGSTPVGSGVYRLHQGKGMMPPPPMGMMPPPP--PP--PSG 487
           P    P    PP+        S P+        Q    +  PP+ + P PP  PP  PS 
Sbjct: 692 PSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQVPPSPPASPPMSPSA 751

Query: 488 QPPP--PPSGPLPPWQQQQQQPPPP----------PPPSSSMASSTPLPWQQNTTTTTTS 535
            PPP  PP    PP Q     P PP          PPP +  A +TP P Q   +   + 
Sbjct: 752 TPPPRVPPLLAAPPLQVP---PSPPASLPMSPLAKPPPQAPPALATP-PLQALPSPPASF 807

Query: 536 AGTGSIPPWQQQQAAAAASPGAPQMQGNPTMVPLPPGVQPPLPPGAP-------PPPPPP 588
            G     P     A+   SP A      P ++  P    PP PP +P       PP P P
Sbjct: 808 PGQAPFSP----SASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGP 863

Query: 589 PPGSAG----MMYAPPPPPPPPMDPSNFVTMMGMGVAG 622
               +G    +  AP PPPPP   PS+  T+ G  +AG
Sbjct: 864 DTSVSGPRLTLALAPGPPPPPSRSPSS--TLSGPDLAG 899



 Score = 77.0 bits (188), Expect = 5e-14
 Identities = 86/307 (28%), Positives = 112/307 (36%), Gaps = 46/307 (14%)

Query: 324 PVPASVGSTSGPATTPLASAPRPAAPANNPPPPSLMSTTQSRPPWMNSG-------PSES 376
           PV A     + P  +P A+ P  A P+   PP  +  +  + PP   S        P  +
Sbjct: 672 PVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLA 731

Query: 377 RPYHGMHGGGPGGPGGGPHSFPHP-LPSLTGGHGGHPMQHNPNGPPPPWMQPPPPPMNQG 435
            P   +    P  P   P + P P +P L       P+Q  P+   PP   P  P     
Sbjct: 732 APPLQVPPSPPASPPMSPSATPPPRVPPLLAAP---PLQVPPS---PPASLPMSPLAKPP 785

Query: 436 PHPPGHHGPPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPMGMMPPPPPPPSGQP--PPPP 493
           P  P     PP+ Q L S P              +P  P+   PP  PP    P    PP
Sbjct: 786 PQAPPALATPPL-QALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPP 844

Query: 494 SGPLPPWQQQQQQPP--------------------PPPPPSSSMAS--STPLPWQQNTTT 531
           S P  P  Q  ++PP                    PPPPPS S +S  S P     +++ 
Sbjct: 845 SPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSA 904

Query: 532 TTTSAGTGSIPPWQQQQAAAAASPGAPQMQGNPTMVPLPPGVQPPL----PPGAPPP-PP 586
           T+T           +  AAA+  P A     +P      P   PPL     PGAP P PP
Sbjct: 905 TSTPEELRGYDSGPEGGAAASPPPDAELAACHPAAWSRGPA--PPLAFRGAPGAPLPWPP 962

Query: 587 PPPPGSA 593
              PGSA
Sbjct: 963 ATGPGSA 969



 Score = 63.9 bits (154), Expect = 4e-10
 Identities = 86/342 (25%), Positives = 112/342 (32%), Gaps = 54/342 (15%)

Query: 322 EAPVPASVGSTSGPATTPLASAPR----PAAPANNPPPPSLMSTTQSRPPWMNSGPSESR 377
           + P   S+ S++ P ++P  S P     P APA+ P  P        RPP +     ++ 
Sbjct: 235 QRPASRSLSSSATPLSSPARSGPSARGTPRAPAH-PSQPKPKGLQALRPPQVTPPRKDAA 293

Query: 378 PYHGMHGGGPGGPGGGPHSFPHPLPSLTGGHGGHPMQHNPNGPPPPWMQPPPPPMNQGPH 437
           P  G     P            P PS T      P   N   P P  + P PP     P 
Sbjct: 294 PALGPLSSSP---------LATPSPSGTKARPVPPPD-NAATPLPATLPPSPPLATPLPL 343

Query: 438 PPGHHGPPPMDQYLGSTPVGSGVYRLHQGKGMMPP---PPMGMMPPPPPPPSGQPPPPPS 494
            P     PP  Q L S P               PP   PP    PP   PPS Q  PP  
Sbjct: 344 APPSPSAPPSLQTLPSPPA-------------TPPSQAPPSMTTPPMQAPPSLQTIPPIQ 390

Query: 495 GPLPPWQQQQQQPPPPPPPSSSMAS-STPLPWQQNTTTTTTSAGTGSIPPWQQQQAAAAA 553
            P        Q PP P   SS  A+ S   P  Q T +  T +     P   Q    + +
Sbjct: 391 VPHSLTSPSLQAPPSPLALSSLQATTSLGSPTLQATHSFLTMS-----PRQTQASLTSPS 445

Query: 554 SPGAPQMQGNPTMVPLPPGVQPPLPPGAPPPPPP-------PPPGSAGMMYAPPPPPP-- 604
            P +      P   PL     PPL     P   P        P  +   + +  P  P  
Sbjct: 446 RPASTPPDSPPLQAPLSLPASPPLQTSLSPAVSPLSSPLTIHPLQALSSLASHSPQAPLS 505

Query: 605 ----PPMDPSNFVTMMGM----GVAGMPPFGMPPAPPPPPPQ 638
               PP++  + +    +         PP    P+  PPP Q
Sbjct: 506 SLIMPPLETQSSLAPPSLQTPPASLTTPPLENLPSLAPPPLQ 547



 Score = 58.9 bits (141), Expect = 1e-08
 Identities = 88/371 (23%), Positives = 122/371 (32%), Gaps = 85/371 (22%)

Query: 336 ATTPLASAP---RPAAPANNPPPPSLMSTTQSRPPWMNSGPSESRPYHGMHGGGPGGPGG 392
           A TP A AP    P  P +  PPP +   T +    + +  +  R       GG GG   
Sbjct: 14  ARTPAARAPGLLTPRPPGSPRPPPPV---TPAALRVLGAAGAVGRKPLAERAGGIGG-AT 69

Query: 393 GPHSFPHPLPSLTGGHGGHPMQHNPNGPPPPWM--QPPPPPMNQGPHP---PGHHGPPPM 447
            P S P   P+ + G        NP   PP     +  PP  N  P P   PG       
Sbjct: 70  IPESAPRAGPTRSAGTSSR----NPASRPPASGRGERAPPAKNTSPGPVSSPGRASGTTR 125

Query: 448 DQYLGSTPVG-SGVYRLHQGKGMMPP---------------PPMGMMPP----------- 480
              LG   +  S    + +GK    P               P  G   P           
Sbjct: 126 PGPLGQKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGT 185

Query: 481 ----PPPPPSGQPPPPPSGPLPPWQQQQQQPPPPPPPSSSMASSTPLPWQQNTTTTTTSA 536
               P P PS +P PP  GP        +     P P++    S     Q+  + + +S+
Sbjct: 186 EVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSS 245

Query: 537 GTGSIPPWQQQQAAAAASPGAPQMQGNPTMVPLPPGVQPPLPPGAPPP------------ 584
            T    P      +  ++ G P+   +P+  P P G+Q   PP   PP            
Sbjct: 246 AT----PLSSPARSGPSARGTPRAPAHPSQ-PKPKGLQALRPPQVTPPRKDAAPALGPLS 300

Query: 585 ---------------PPPPPPGSAGMMYA--PPPPP---PPPMDPSNFVTMMGMGVAGMP 624
                          P PPP  +A  + A  PP PP   P P+ P +      +     P
Sbjct: 301 SSPLATPSPSGTKARPVPPPDNAATPLPATLPPSPPLATPLPLAPPSPSAPPSLQTLPSP 360

Query: 625 PFGMPPAPPPP 635
           P   PP+  PP
Sbjct: 361 P-ATPPSQAPP 370



 Score = 56.6 bits (135), Expect = 7e-08
 Identities = 71/308 (23%), Positives = 101/308 (32%), Gaps = 42/308 (13%)

Query: 324 PVPASVGSTSGPATTPLASAPRPAAPAN-NPPPPSLMSTTQSRPPWMNSGPSESRPYHGM 382
           P PA    +    T      PRPA  A   PP      +  S      + PS +      
Sbjct: 172 PSPAMARRSRAAGTE--VGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPS 229

Query: 383 HGGG---PGGPGGGPHSFPHPLPSLTG--GHGGHPMQHNPNGPPPPWMQPPPPPMNQGPH 437
            GGG   P        + P   P+ +G    G      +P+ P P  +Q   PP    P 
Sbjct: 230 AGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPR 289

Query: 438 PPGHHGPPPMDQYLGSTPVGSGVYRLHQGKGMMPPP-------------------PMGMM 478
                   P+     +TP  SG          +PPP                   P+ + 
Sbjct: 290 KDAAPALGPLSSSPLATPSPSGTKARP-----VPPPDNAATPLPATLPPSPPLATPLPLA 344

Query: 479 PP-PPPPPSGQPPPPPSGPLPPWQQQQQQPPPPPPPSSSMASSTPLPWQQNTTTTTTSAG 537
           PP P  PPS Q  P P    PP Q       PP     S+ +  P+    + T+ +  A 
Sbjct: 345 PPSPSAPPSLQTLPSPPA-TPPSQAPPSMTTPPMQAPPSLQTIPPIQVPHSLTSPSLQAP 403

Query: 538 TGSIPPWQQQQAAAAASPGAPQMQGNPTMVPLPP-----GVQPPLPPGAPPPPPPPPPGS 592
                P       A  S G+P +Q   + + + P      +  P  P + PP  PP    
Sbjct: 404 PS---PLALSSLQATTSLGSPTLQATHSFLTMSPRQTQASLTSPSRPASTPPDSPPLQAP 460

Query: 593 AGMMYAPP 600
             +  +PP
Sbjct: 461 LSLPASPP 468



 Score = 53.5 bits (127), Expect = 6e-07
 Identities = 92/390 (23%), Positives = 124/390 (31%), Gaps = 67/390 (17%)

Query: 297 PGDPQSAQDKARMDKEYLSLMAELGEAPVPASVGSTSG---PATTPLASAPRPAAPANNP 353
           PG P+            L     +G  P+    G   G   P + P A   R A  ++  
Sbjct: 30  PGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATIPESAPRAGPTRSAGTSSRN 89

Query: 354 PP--PSLMSTTQSRPPWMNSGP---SESRPYHGMHGGGPGGPGG-----------GPHSF 397
           P   P      +  PP  N+ P   S      G    GP G  G           G  + 
Sbjct: 90  PASRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRISAEETVARGKATE 149

Query: 398 PHPLPSLTGGHGGHPMQHNPNGPPPPWMQP----------PPPPMNQGPHPPGHHGP--- 444
                +L+ G         P  P P   +           P P  +  P PP   GP   
Sbjct: 150 APKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSARPRPPTE-GPRKS 208

Query: 445 -PPMDQYLGSTPVGSGVYRLHQGKGMMPPP---------PMGMMPPPPPPPSGQPPPP-- 492
                ++  + P  +   R   G G+  P          P+       P   G P  P  
Sbjct: 209 VSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAH 268

Query: 493 PSGPLPPWQQQQQQPPPPPPPSSSMASSTPLPWQQNTTTTTTSAGTGSIPPWQQQQAAAA 552
           PS P P   Q  + P   PP   +  +  PL      T + +      +PP         
Sbjct: 269 PSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSGTKARPVPPPDNAATPLP 328

Query: 553 AS-PGAPQMQGNPTMVPLPPGVQPPLPPGAPP-----PPPPPPPGSAGMMYAPPPPPPPP 606
           A+ P +P     P   PLP  + PP  P APP     P PP  P S     APP    PP
Sbjct: 329 ATLPPSP-----PLATPLP--LAPP-SPSAPPSLQTLPSPPATPPS----QAPPSMTTPP 376

Query: 607 MD-PSNFVTMMGMGV---AGMPPFGMPPAP 632
           M  P +  T+  + V      P    PP+P
Sbjct: 377 MQAPPSLQTIPPIQVPHSLTSPSLQAPPSP 406



 Score = 48.5 bits (114), Expect = 2e-05
 Identities = 70/299 (23%), Positives = 88/299 (29%), Gaps = 93/299 (31%)

Query: 323  APVPASVGSTSGPATTPLASAPRPAAPANNPPPPSLMSTTQSRPPWMNSGPSESRPYHGM 382
            A  P S  +T  P   PL +AP    P +  PP SL  +  ++PP        + P   +
Sbjct: 743  ASPPMSPSATPPPRVPPLLAAPPLQVPPS--PPASLPMSPLAKPPPQAPPALATPPLQAL 800

Query: 383  HGGGPGGPGGGPHSFPHPLPSLTGGHGGHPMQHNPNGPPP----PWMQ-PPPPPMN---Q 434
                   PG  P S    LP         P+   P   PP    P +Q PP PP +   Q
Sbjct: 801  PSPPASFPGQAPFSPSASLPM-------SPLATPPPQAPPVLAAPLLQVPPSPPASPTLQ 853

Query: 435  GPHPPGHHGPPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPMGMMPPPPPPPSGQPP---- 490
             P  P   GP         T V              P   + + P PPPPPS  P     
Sbjct: 854  APRRPPTPGP--------DTSVSG------------PRLTLALAPGPPPPPSRSPSSTLS 893

Query: 491  --------------------------------PPPSGPLPPWQQQQQQPPPPPPPSSSMA 518
                                            PPP   L           P PP +   A
Sbjct: 894  GPDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAACHPAAWSRGPAPPLAFRGA 953

Query: 519  SSTPLPWQ--------------------QNTTTTTTSAGTGSIPPWQQQQAAAAASPGA 557
               PLPW                     ++ T    +   G  P     +AAA A  GA
Sbjct: 954  PGAPLPWPPATGPGSADGLCTIYETEGPESATPAPGALDPGPSPGTSGGKAAAGAGAGA 1012



 Score = 34.3 bits (77), Expect = 0.36
 Identities = 27/92 (29%), Positives = 34/92 (36%), Gaps = 28/92 (30%)

Query: 571 PGVQPPLPPGAPPPPPPPPP------GSAGMMYAPP-------------PPPPPPMDPSN 611
           PG+  P PPG+P PPPP  P      G+AG +   P             P   P   P+ 
Sbjct: 22  PGLLTPRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATIPESAPRAGPTR 81

Query: 612 FVTMMGMGVAGMPPFGMPPA----PPPPPPQN 639
                  G +   P   PPA       PP +N
Sbjct: 82  -----SAGTSSRNPASRPPASGRGERAPPAKN 108


>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
           tract binding protein associated) [Homo sapiens]
          Length = 707

 Score =  108 bits (269), Expect = 2e-23
 Identities = 89/263 (33%), Positives = 99/263 (37%), Gaps = 68/263 (25%)

Query: 381 GMHGGGPGGPGGGPHSFPHPLPSLTGGHGGHPMQHNP--NGPPPPWMQPPPPPMNQGPHP 438
           G H  G GG  GG H F  P P +       PM   P  +GP PP   PPPPP  Q   P
Sbjct: 15  GFHRRGGGGGRGGLHDFRSPPPGMGLNQNRGPMGPGPGQSGPKPPI--PPPPPHQQQQQP 72

Query: 439 PGHHGPPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPMGMMPPPPPPPSGQPPPPPSGPLP 498
           P                                       PPP  PP  QPPP P     
Sbjct: 73  P------------------------------------PQQPPPQQPPPHQPPPHPQ---- 92

Query: 499 PWQQQQQQPPPPPPPSSS-MASSTPLPWQQNTTTTTTSAGTGSIPPWQQQQAAAAASPGA 557
           P QQ  QQPPPPP  SS  + +  P P          + G GS PP     A+++A P  
Sbjct: 93  PHQQ--QQPPPPPQDSSKPVVAQGPGP----------APGVGSAPP-----ASSSAPPAT 135

Query: 558 PQMQGNPT-MVPLPPGVQPPLPPGAPPPPPPPPPGSAGMMYAPP----PPPPPPMDPS-N 611
           P   G P    P P    PP    APP  PPP P S+G+   PP    PPPPP   P   
Sbjct: 136 PPTSGAPPGSGPGPTPTPPPAVTSAPPGAPPPTPPSSGVPTTPPQAGGPPPPPAAVPGPG 195

Query: 612 FVTMMGMGVAGMPPFGMPPAPPP 634
                G G  G     MP  P P
Sbjct: 196 PGPKQGPGPGGPKGGKMPGGPKP 218



 Score = 79.0 bits (193), Expect = 1e-14
 Identities = 66/190 (34%), Positives = 70/190 (36%), Gaps = 46/190 (24%)

Query: 457 GSGVYRLHQGKGMMPPPPMGMMPPPPP--PPSGQPPPPPSGPLPPWQQQQQQPPPPPPPS 514
           G G   LH  +   PPP MG+     P  P  GQ  P P  P PP  QQQQQPPP  PP 
Sbjct: 22  GGGRGGLHDFRS--PPPGMGLNQNRGPMGPGPGQSGPKPPIPPPPPHQQQQQPPPQQPPP 79

Query: 515 SSMASSTPLPWQQNTTTTTTSAGTGSIPPWQQQQAAAAASPGAPQMQGNPTMVPLP---P 571
                  P P  Q               P QQQQ      P  PQ    P +   P   P
Sbjct: 80  QQPPPHQPPPHPQ---------------PHQQQQP-----PPPPQDSSKPVVAQGPGPAP 119

Query: 572 GV--QPPLPPGAPPPPPPPPPGSAGMMYAPPPPPPPPMDPSNFVTMMGMGVAGMPPFGMP 629
           GV   PP    APP  PP      G    P P PPP              V   PP    
Sbjct: 120 GVGSAPPASSSAPPATPPTSGAPPGSGPGPTPTPPP-------------AVTSAPP---- 162

Query: 630 PAPPPPPPQN 639
            APPP PP +
Sbjct: 163 GAPPPTPPSS 172



 Score = 66.2 bits (160), Expect = 9e-11
 Identities = 58/190 (30%), Positives = 67/190 (35%), Gaps = 29/190 (15%)

Query: 344 PRPAAPANNPPPPSLMST------------TQSRPPWMNSGPSESRPYHGMHGGGPGGPG 391
           P+P      PPPP   S               S PP  +S P  + P  G        PG
Sbjct: 91  PQPHQQQQPPPPPQDSSKPVVAQGPGPAPGVGSAPPASSSAPPATPPTSG------APPG 144

Query: 392 GGPHSFPHPLPSLTGGHGGHPMQHNPNG-----PPPPWMQPPPPPMNQGPHPPGHHGPPP 446
            GP   P P P++T    G P    P+      PP     PPPP    GP P    GP P
Sbjct: 145 SGPGPTPTPPPAVTSAPPGAPPPTPPSSGVPTTPPQAGGPPPPPAAVPGPGPGPKQGPGP 204

Query: 447 MDQYLGSTPVGSGVYRLHQGKGMMPPPPMGMMPPPPPPPSGQPPPPPSGPLPPWQQQQQQ 506
                G  P G    +   G G+  P   G  P PP    G+P        P  QQ  Q 
Sbjct: 205 GGPKGGKMPGGP---KPGGGPGLSTP---GGHPKPPHRGGGEPRGGRQHHPPYHQQHHQG 258

Query: 507 PPPPPPPSSS 516
           PPP  P   S
Sbjct: 259 PPPGGPGGRS 268



 Score = 64.7 bits (156), Expect = 2e-10
 Identities = 64/216 (29%), Positives = 72/216 (33%), Gaps = 36/216 (16%)

Query: 324 PVPASVGSTSGPATTPLASAPRPAAPANNPPPPSLMSTTQSRPPWMNSGPSESRPYHGMH 383
           P+P            P    P+   P   PP P      Q  PP  +S    S+P     
Sbjct: 59  PIPPPPPHQQQQQPPPQQPPPQQPPPHQPPPHPQPHQQQQPPPPPQDS----SKPVVAQG 114

Query: 384 GGGPGGPGGGP---HSFPHPLPSLTGGHGGHPMQHNPNGPP-----PPWMQPPPPPMNQG 435
            G   G G  P    S P   P  +G   G      P  PP     PP   PP PP +  
Sbjct: 115 PGPAPGVGSAPPASSSAPPATPPTSGAPPGSGPGPTPTPPPAVTSAPPGAPPPTPPSSGV 174

Query: 436 P-HPPGHHGPPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPMGMMPPPPPP--------PS 486
           P  PP   GPPP    +     G       QG G    P  G MP  P P        P 
Sbjct: 175 PTTPPQAGGPPPPPAAVPGPGPGP-----KQGPG-PGGPKGGKMPGGPKPGGGPGLSTPG 228

Query: 487 GQPPPPPSG---------PLPPWQQQQQQPPPPPPP 513
           G P PP  G           PP+ QQ  Q PPP  P
Sbjct: 229 GHPKPPHRGGGEPRGGRQHHPPYHQQHHQGPPPGGP 264


>gi|117306167 proline-rich protein BstNI subfamily 3 precursor [Homo
           sapiens]
          Length = 309

 Score =  107 bits (267), Expect = 3e-23
 Identities = 101/305 (33%), Positives = 107/305 (35%), Gaps = 66/305 (21%)

Query: 349 PANNPPPPSLMSTTQSRPPWMNSGPSESRPYHGMHGGGPGGPGGGPHSFPHPLPSLTGGH 408
           P   PPPP      + RPP      S+  P       GP   GG     P P P    G 
Sbjct: 47  PQRTPPPPG---KPEGRPP-QGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGQ 102

Query: 409 ---GGHPMQHNPNGPPPPWMQPPPPPMNQGPHPPGHHGPPPMDQYLGSTPVGSGVYRLHQ 465
              GG+  Q  P  P  P   PPP   NQ   PP   G P      G  P G      +Q
Sbjct: 103 PPQGGNQSQGPPPRPGKP-EGPPPQGGNQSQGPPPRPGKPE-----GPPPQGG-----NQ 151

Query: 466 GKGMMPPPPMGMMPPPPPPPSG---QPPPP----PSGPLPPWQQQQQQPPPPP------P 512
            +G   PPP    P  PPP  G   Q PPP    P GP P    Q Q PPP P      P
Sbjct: 152 SQG---PPPRPGKPEGPPPQGGNQSQGPPPHPGKPEGPPPQGGNQSQGPPPRPGKPEGPP 208

Query: 513 PSSSMASSTPLPWQQNTTTTTTSAGTGSIPPWQQQQAAAAASP------GAPQMQGNPTM 566
           P     S  P P            G    PP Q         P      G P  +GN   
Sbjct: 209 PQGGNQSQGPPP----------RPGKPEGPPSQGGNKPQGPPPHPGKPQGPPPQEGNKPQ 258

Query: 567 VPLPPG-VQPPLPPGAPPPPPPPPPGSAGMMYAPPPPPPPPMDPSNFVTMMGMGVAGMPP 625
            P PPG  Q P PPG  P  P PPP  AG    PPPPP               G    PP
Sbjct: 259 RPPPPGRPQGPPPPGGNPQQPLPPP--AGKPQGPPPPPQG-------------GRPHRPP 303

Query: 626 FGMPP 630
            G PP
Sbjct: 304 QGQPP 308



 Score =  104 bits (259), Expect = 3e-22
 Identities = 104/323 (32%), Positives = 117/323 (36%), Gaps = 56/323 (17%)

Query: 336 ATTPLASAPRPAAPANNPPPPSLMS-TTQSRPPWMNSGPSESRPYHGMHGGGPGGPGGGP 394
           A   L+SA       +    PS++S   + R P   + P  + P  G   G P   GG  
Sbjct: 9   ALLALSSAQSLNEDVSQEESPSVISGKPEGRRPQGGNQPQRTPPPPGKPEGRPP-QGGNQ 67

Query: 395 HSFPHPLPSLTGG---HGGHPMQHNPNGPPPPWMQPPPPP-MNQGPHP-PGH-HGPPPM- 447
              P P P    G    GG+  Q  P  P  P  QPP     +QGP P PG   GPPP  
Sbjct: 68  SQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGQPPQGGNQSQGPPPRPGKPEGPPPQG 127

Query: 448 -DQYLGSTPVGSGVYRLHQGKGMMPPPPMGMMPPPPPPPSGQPPPPPSGPLPPWQQQQQQ 506
            +Q  G  P          GK   PPP  G     PPP  G+P  PP    P    Q Q 
Sbjct: 128 GNQSQGPPP--------RPGKPEGPPPQGGNQSQGPPPRPGKPEGPP----PQGGNQSQG 175

Query: 507 PPPPP------PPSSSMASSTPLPWQQNTTTTTTSAGTGSIPPWQQQQAAAAASPGAPQM 560
           PPP P      PP     S  P P            G    PP Q        S G P  
Sbjct: 176 PPPHPGKPEGPPPQGGNQSQGPPP----------RPGKPEGPPPQ----GGNQSQGPPPR 221

Query: 561 QGNPTMVPLPPGVQPPLPPGAPPPPPPPPPGSAGMMYAPPPP-----PPPPMDPSNFVTM 615
            G P   P   G +P  PP  P  P  PPP        PPPP     PPPP         
Sbjct: 222 PGKPEGPPSQGGNKPQGPPPHPGKPQGPPPQEGNKPQRPPPPGRPQGPPPPG-------- 273

Query: 616 MGMGVAGMPPFGMPPAPPPPPPQ 638
            G     +PP    P  PPPPPQ
Sbjct: 274 -GNPQQPLPPPAGKPQGPPPPPQ 295



 Score = 97.4 bits (241), Expect = 3e-20
 Identities = 88/282 (31%), Positives = 98/282 (34%), Gaps = 66/282 (23%)

Query: 344 PRPAAPANNPP--------PPSLMSTTQSRPPWMNSGPSESRPYHGMHGGGPGGPGGGPH 395
           PRP  P   PP        PP      + +PP      S+  P       GP   GG   
Sbjct: 73  PRPGKPEGPPPQGGNQSQGPPPRPGKPEGQPP-QGGNQSQGPPPRPGKPEGPPPQGGNQS 131

Query: 396 SFPHPLPSLTGG---HGGHPMQHNPNGPPP-PWMQPPPPPM--NQGPHPPGHHGPPPMDQ 449
             P P P    G    GG+  Q    GPPP P     PPP   NQ   PP H G P    
Sbjct: 132 QGPPPRPGKPEGPPPQGGNQSQ----GPPPRPGKPEGPPPQGGNQSQGPPPHPGKPE--- 184

Query: 450 YLGSTPVGSGVYRLHQGKGMMPPPPMGMMPPPPPPPSGQ----PPPPPSGPLPPWQQQQQ 505
             G  P G      +Q +G   PPP    P  PPP  G     PPP P  P  P  Q   
Sbjct: 185 --GPPPQGG-----NQSQG---PPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPSQGGN 234

Query: 506 QPPPPPPPSSSMASSTPLPWQQNTTTTTTSAGTGSIPPWQQQQAAAAASPGAPQMQGNPT 565
           +P  PPP                             PP +  +      PG PQ      
Sbjct: 235 KPQGPPPHPGKPQGP---------------------PPQEGNKPQRPPPPGRPQ------ 267

Query: 566 MVPLPPGVQP--PLPPGAPPPPPPPPPGSAGMMYAPPPPPPP 605
             P PPG  P  PLPP A  P  PPPP   G  + PP   PP
Sbjct: 268 -GPPPPGGNPQQPLPPPAGKPQGPPPPPQGGRPHRPPQGQPP 308



 Score = 91.7 bits (226), Expect = 2e-18
 Identities = 80/246 (32%), Positives = 85/246 (34%), Gaps = 40/246 (16%)

Query: 410 GHPMQHNPNGPPPPWMQPPPPPMNQGPHPPGHH---GPPPMDQYLGSTPVGSGVYRLHQG 466
           G P    P G   P   PPPP   +G  P G +   GPPP        P   G    +Q 
Sbjct: 34  GKPEGRRPQGGNQPQRTPPPPGKPEGRPPQGGNQSQGPPPRPGKPEGPPPQGG----NQS 89

Query: 467 KGMMPPPPMGMMPPPPPPPSG---QPPPP----PSGPLPPWQQQQQQPPPPP------PP 513
           +G   PPP    P   PP  G   Q PPP    P GP P    Q Q PPP P      PP
Sbjct: 90  QG---PPPRPGKPEGQPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPP 146

Query: 514 SSSMASSTPLPWQQNTTTTTTSAGTGSIPPWQQQQAAAAASPGAPQMQGNPTMVPLPPGV 573
                S  P P            G    PP Q        S G P   G P   P   G 
Sbjct: 147 QGGNQSQGPPP----------RPGKPEGPPPQ----GGNQSQGPPPHPGKPEGPPPQGGN 192

Query: 574 QPPLPPGAPPPPPPPPPGSAGMMYAPPPPPPPPMDPSNFVTMMGMGVAGMPPFGMPPAPP 633
           Q   PP  P  P  PPP        PPP P  P  P +     G    G PP    P  P
Sbjct: 193 QSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPS---QGGNKPQGPPPHPGKPQGP 249

Query: 634 PPPPQN 639
           PP   N
Sbjct: 250 PPQEGN 255



 Score = 84.0 bits (206), Expect = 4e-16
 Identities = 78/228 (34%), Positives = 86/228 (37%), Gaps = 50/228 (21%)

Query: 322 EAPVPASVGSTSGPATTPLASAPRPAAPANNPP--------PPSLMSTTQSRPPWMNSGP 373
           E P P     + GP        PRP  P   PP        PP      +  PP      
Sbjct: 79  EGPPPQGGNQSQGPP-------PRPGKPEGQPPQGGNQSQGPPPRPGKPEGPPP-QGGNQ 130

Query: 374 SESRPYHGMHGGGPGGPGGGPHSFPHPLPSLTGG---HGGHPMQHNPNGPPP-PWMQPPP 429
           S+  P       GP   GG     P P P    G    GG+  Q    GPPP P     P
Sbjct: 131 SQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQ----GPPPHPGKPEGP 186

Query: 430 PP----MNQGPHP-PGH-HGPPPM--DQYLG--------STPVGSGVYR-----LHQGKG 468
           PP     +QGP P PG   GPPP   +Q  G          P   G  +      H GK 
Sbjct: 187 PPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPSQGGNKPQGPPPHPGKP 246

Query: 469 MMPPPPMGMMPPPPPPPS-GQPPPPPSG----PLPPWQQQQQQPPPPP 511
             PPP  G  P  PPPP   Q PPPP G    PLPP   + Q PPPPP
Sbjct: 247 QGPPPQEGNKPQRPPPPGRPQGPPPPGGNPQQPLPPPAGKPQGPPPPP 294



 Score = 83.2 bits (204), Expect = 7e-16
 Identities = 71/239 (29%), Positives = 84/239 (35%), Gaps = 46/239 (19%)

Query: 296 RPGDPQSAQDKARMDKEYLSLMAELGEAPVPASVGSTSGPATTPLASAPRPAAPANNPP- 354
           RPG P+    +     +         E P P     + GP        PRP  P   PP 
Sbjct: 95  RPGKPEGQPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPP-------PRPGKPEGPPPQ 147

Query: 355 -------PPSLMSTTQSRPPWMNSGPSESRPYHGMHGGGPGGPGGGPHSFPHPLPSLTGG 407
                  PP      +  PP      S+  P H     GP   GG     P P P    G
Sbjct: 148 GGNQSQGPPPRPGKPEGPPP-QGGNQSQGPPPHPGKPEGPPPQGGNQSQGPPPRPGKPEG 206

Query: 408 ---HGGHPMQHNPNGPPPPWMQPPPPPMNQG-------PHPPGHHGPPPMDQYLGSTPVG 457
               GG+  Q    GPPP   +P  PP   G       PHP    GPPP +      P  
Sbjct: 207 PPPQGGNQSQ----GPPPRPGKPEGPPSQGGNKPQGPPPHPGKPQGPPPQEGNKPQRPPP 262

Query: 458 SGVYRLHQGKGMMPPPPMGMMPPPPPPPSGQ---PPPPPSGPLPPWQQQQQQPPPPPPP 513
            G       +   PPPP G    P PPP+G+   PPPPP G  P       +PP   PP
Sbjct: 263 PG-------RPQGPPPPGGNPQQPLPPPAGKPQGPPPPPQGGRP------HRPPQGQPP 308


>gi|119395760 diaphanous 1 isoform 2 [Homo sapiens]
          Length = 1263

 Score =  105 bits (263), Expect = 1e-22
 Identities = 72/192 (37%), Positives = 84/192 (43%), Gaps = 48/192 (25%)

Query: 471 PPPPM----GMMPPPPPPPSGQPPPPPSGPLPPWQQQQQQPPPPPPPSSSMASSTPLPWQ 526
           P PP+    G + PPPP P     PPP  P PP       PPPP P    ++S   LP  
Sbjct: 575 PAPPLPGDSGTIIPPPPAPGDSTTPPPPPPPPP-------PPPPLPGGVCISSPPSLPGG 627

Query: 527 QNTTTTTTSAGTGSIPPWQQQQAAAAASPGAPQMQGNPTMVPLPPGVQPPLPPGAP---- 582
              +     +G  +IPP           P  P+  G P+   LP G   P PP  P    
Sbjct: 628 TAISPPPPLSGDATIPP----------PPPLPEGVGIPSPSSLPGGTAIPPPPPLPGSAR 677

Query: 583 -PPPPPPPPGSAGMMYAPPP-------PPPPPMDPSNFVTMMGMGVAGMPPF----GMPP 630
            PPPPPP PGSAG+   PPP       PPPPP  P       G G+   PPF    G+PP
Sbjct: 678 IPPPPPPLPGSAGIPPPPPPLPGEAGMPPPPPPLPG------GPGIPPPPPFPGGPGIPP 731

Query: 631 AP-----PPPPP 637
            P     PPPPP
Sbjct: 732 PPPGMGMPPPPP 743



 Score =  101 bits (251), Expect = 2e-21
 Identities = 78/219 (35%), Positives = 97/219 (44%), Gaps = 38/219 (17%)

Query: 428 PPPPMNQGPHPPGHHGPPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPM---GMMPPPPPP 484
           PP   ++ P PP     PP+       P  SG         ++PPPP       PPPPPP
Sbjct: 564 PPSVPSRAPVPPA----PPL-------PGDSGT--------IIPPPPAPGDSTTPPPPPP 604

Query: 485 PSGQPPPPPSGPL---PPWQQQQQQPPPPPPPS--SSMASSTPLPWQQNTTTTTTSAGTG 539
           P   PPP P G     PP         PPPP S  +++    PLP      + ++  G  
Sbjct: 605 PPPPPPPLPGGVCISSPPSLPGGTAISPPPPLSGDATIPPPPPLPEGVGIPSPSSLPGGT 664

Query: 540 SIPPWQQQQAAAAASPGAPQMQGNPTMVPLPPGVQPPLPPGAPPPPPPPP-PGSAGMMYA 598
           +IPP      +A   P  P + G+  + P PP    PLP  A  PPPPPP PG  G+   
Sbjct: 665 AIPPPPPLPGSARIPPPPPPLPGSAGIPPPPP----PLPGEAGMPPPPPPLPGGPGI--- 717

Query: 599 PPPPPPPPMDPSNFVTMMGMGVAGMPP--FGMPPAPPPP 635
            PPPPP P  P       GMG+   PP  FG+P AP  P
Sbjct: 718 -PPPPPFPGGPGIPPPPPGMGMPPPPPFGFGVPAAPVLP 755



 Score = 88.6 bits (218), Expect = 2e-17
 Identities = 102/342 (29%), Positives = 122/342 (35%), Gaps = 127/342 (37%)

Query: 301 QSAQDKARMDKEYLSLMAELGEAPVPASVGSTSGPATTPLASAPRPAAPANN----PPPP 356
           Q   + A++ KE      E+      A     S P+  P+   P P  P ++    PPPP
Sbjct: 534 QLTGEVAKLTKELEDAKKEMASLSAAAITVPPSVPSRAPVP--PAPPLPGDSGTIIPPPP 591

Query: 357 SLMSTTQSRPPWMNSGPSESRPYHGMHGGGPGGPGGGPHSFPHPLPSLTGGHGGHPMQHN 416
           +   +T   PP     P    P        P  PGG   S P   PSL GG         
Sbjct: 592 APGDSTTPPPP-----PPPPPP-------PPPLPGGVCISSP---PSLPGGTA------- 629

Query: 417 PNGPPPPWMQPPPPPMNQGPHPPGHHGPPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPM- 475
                   + PPPP       PP    PPP+ + +G     S    L  G  + PPPP+ 
Sbjct: 630 --------ISPPPPLSGDATIPP----PPPLPEGVGIPSPSS----LPGGTAIPPPPPLP 673

Query: 476 --GMMPPPPPP---PSGQPPPPPSGPLPPWQQQQQQPPPPPPPSSSMASSTPLPWQQNTT 530
               +PPPPPP    +G PPPPP  PLP    +   PPPPP          PLP      
Sbjct: 674 GSARIPPPPPPLPGSAGIPPPPP--PLP---GEAGMPPPPP----------PLP------ 712

Query: 531 TTTTSAGTGSIPPWQQQQAAAAASPGAPQMQGNPTMVPLPPGVQPPLPPGAPPPPPPPPP 590
                                   PG P           PP   PP P G  P  PPPPP
Sbjct: 713 ----------------------GGPGIP-----------PP---PPFPGG--PGIPPPPP 734

Query: 591 GSAGMMYAPPPPPPPPMDPSNFVTMMGMGVAGMP--PFGMPP 630
           G    M  PPPPP             G GV   P  PFG+ P
Sbjct: 735 G----MGMPPPPP------------FGFGVPAAPVLPFGLTP 760



 Score = 75.9 bits (185), Expect = 1e-13
 Identities = 60/178 (33%), Positives = 69/178 (38%), Gaps = 43/178 (24%)

Query: 497 LPPWQQQQQQPPPPPP-PSSSMASSTPLPWQQNTTT-----------------------T 532
           +PP    +   PP PP P  S     P P   ++TT                        
Sbjct: 563 VPPSVPSRAPVPPAPPLPGDSGTIIPPPPAPGDSTTPPPPPPPPPPPPPLPGGVCISSPP 622

Query: 533 TTSAGTG-SIPPWQQQQAAAAASPGAPQMQGNPTMVPLPPGVQPPLPPGAP-----PPPP 586
           +   GT  S PP     A     P  P+  G P+   LP G   P PP  P     PPPP
Sbjct: 623 SLPGGTAISPPPPLSGDATIPPPPPLPEGVGIPSPSSLPGGTAIPPPPPLPGSARIPPPP 682

Query: 587 PPPPGSAGMMYAPPP-------PPPPPMDPSNFVTMMGMGVAGMPPFGMPPAPPPPPP 637
           PP PGSAG+   PPP       PPPPP  P       G G+   PPF   P  PPPPP
Sbjct: 683 PPLPGSAGIPPPPPPLPGEAGMPPPPPPLPG------GPGIPPPPPFPGGPGIPPPPP 734



 Score = 62.8 bits (151), Expect = 9e-10
 Identities = 44/128 (34%), Positives = 51/128 (39%), Gaps = 25/128 (19%)

Query: 535 SAGTGSIPPWQQQQAAAAASPGAPQMQGNPTMVPLPPGVQPPLPPGAPPPPPPPP-PGS- 592
           SA   ++PP    +A    +P  P   G     P  PG     PP  PPPPPPPP PG  
Sbjct: 557 SAAAITVPPSVPSRAPVPPAPPLPGDSGTIIPPPPAPGDSTTPPPPPPPPPPPPPLPGGV 616

Query: 593 ---------AGMMYAPPP--------PPPPPMD-----PSNFVTMMGMGVAGMPPF-GMP 629
                     G   +PPP        PPPPP+      PS      G  +   PP  G  
Sbjct: 617 CISSPPSLPGGTAISPPPPLSGDATIPPPPPLPEGVGIPSPSSLPGGTAIPPPPPLPGSA 676

Query: 630 PAPPPPPP 637
             PPPPPP
Sbjct: 677 RIPPPPPP 684


>gi|119395758 diaphanous 1 isoform 1 [Homo sapiens]
          Length = 1272

 Score =  105 bits (263), Expect = 1e-22
 Identities = 72/192 (37%), Positives = 84/192 (43%), Gaps = 48/192 (25%)

Query: 471 PPPPM----GMMPPPPPPPSGQPPPPPSGPLPPWQQQQQQPPPPPPPSSSMASSTPLPWQ 526
           P PP+    G + PPPP P     PPP  P PP       PPPP P    ++S   LP  
Sbjct: 584 PAPPLPGDSGTIIPPPPAPGDSTTPPPPPPPPP-------PPPPLPGGVCISSPPSLPGG 636

Query: 527 QNTTTTTTSAGTGSIPPWQQQQAAAAASPGAPQMQGNPTMVPLPPGVQPPLPPGAP---- 582
              +     +G  +IPP           P  P+  G P+   LP G   P PP  P    
Sbjct: 637 TAISPPPPLSGDATIPP----------PPPLPEGVGIPSPSSLPGGTAIPPPPPLPGSAR 686

Query: 583 -PPPPPPPPGSAGMMYAPPP-------PPPPPMDPSNFVTMMGMGVAGMPPF----GMPP 630
            PPPPPP PGSAG+   PPP       PPPPP  P       G G+   PPF    G+PP
Sbjct: 687 IPPPPPPLPGSAGIPPPPPPLPGEAGMPPPPPPLPG------GPGIPPPPPFPGGPGIPP 740

Query: 631 AP-----PPPPP 637
            P     PPPPP
Sbjct: 741 PPPGMGMPPPPP 752



 Score =  101 bits (251), Expect = 2e-21
 Identities = 78/219 (35%), Positives = 97/219 (44%), Gaps = 38/219 (17%)

Query: 428 PPPPMNQGPHPPGHHGPPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPM---GMMPPPPPP 484
           PP   ++ P PP     PP+       P  SG         ++PPPP       PPPPPP
Sbjct: 573 PPSVPSRAPVPPA----PPL-------PGDSGT--------IIPPPPAPGDSTTPPPPPP 613

Query: 485 PSGQPPPPPSGPL---PPWQQQQQQPPPPPPPS--SSMASSTPLPWQQNTTTTTTSAGTG 539
           P   PPP P G     PP         PPPP S  +++    PLP      + ++  G  
Sbjct: 614 PPPPPPPLPGGVCISSPPSLPGGTAISPPPPLSGDATIPPPPPLPEGVGIPSPSSLPGGT 673

Query: 540 SIPPWQQQQAAAAASPGAPQMQGNPTMVPLPPGVQPPLPPGAPPPPPPPP-PGSAGMMYA 598
           +IPP      +A   P  P + G+  + P PP    PLP  A  PPPPPP PG  G+   
Sbjct: 674 AIPPPPPLPGSARIPPPPPPLPGSAGIPPPPP----PLPGEAGMPPPPPPLPGGPGI--- 726

Query: 599 PPPPPPPPMDPSNFVTMMGMGVAGMPP--FGMPPAPPPP 635
            PPPPP P  P       GMG+   PP  FG+P AP  P
Sbjct: 727 -PPPPPFPGGPGIPPPPPGMGMPPPPPFGFGVPAAPVLP 764



 Score = 88.6 bits (218), Expect = 2e-17
 Identities = 102/342 (29%), Positives = 122/342 (35%), Gaps = 127/342 (37%)

Query: 301 QSAQDKARMDKEYLSLMAELGEAPVPASVGSTSGPATTPLASAPRPAAPANN----PPPP 356
           Q   + A++ KE      E+      A     S P+  P+   P P  P ++    PPPP
Sbjct: 543 QLTGEVAKLTKELEDAKKEMASLSAAAITVPPSVPSRAPVP--PAPPLPGDSGTIIPPPP 600

Query: 357 SLMSTTQSRPPWMNSGPSESRPYHGMHGGGPGGPGGGPHSFPHPLPSLTGGHGGHPMQHN 416
           +   +T   PP     P    P        P  PGG   S P   PSL GG         
Sbjct: 601 APGDSTTPPPP-----PPPPPP-------PPPLPGGVCISSP---PSLPGGTA------- 638

Query: 417 PNGPPPPWMQPPPPPMNQGPHPPGHHGPPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPM- 475
                   + PPPP       PP    PPP+ + +G     S    L  G  + PPPP+ 
Sbjct: 639 --------ISPPPPLSGDATIPP----PPPLPEGVGIPSPSS----LPGGTAIPPPPPLP 682

Query: 476 --GMMPPPPPP---PSGQPPPPPSGPLPPWQQQQQQPPPPPPPSSSMASSTPLPWQQNTT 530
               +PPPPPP    +G PPPPP  PLP    +   PPPPP          PLP      
Sbjct: 683 GSARIPPPPPPLPGSAGIPPPPP--PLP---GEAGMPPPPP----------PLP------ 721

Query: 531 TTTTSAGTGSIPPWQQQQAAAAASPGAPQMQGNPTMVPLPPGVQPPLPPGAPPPPPPPPP 590
                                   PG P           PP   PP P G  P  PPPPP
Sbjct: 722 ----------------------GGPGIP-----------PP---PPFPGG--PGIPPPPP 743

Query: 591 GSAGMMYAPPPPPPPPMDPSNFVTMMGMGVAGMP--PFGMPP 630
           G    M  PPPPP             G GV   P  PFG+ P
Sbjct: 744 G----MGMPPPPP------------FGFGVPAAPVLPFGLTP 769



 Score = 75.9 bits (185), Expect = 1e-13
 Identities = 60/178 (33%), Positives = 69/178 (38%), Gaps = 43/178 (24%)

Query: 497 LPPWQQQQQQPPPPPP-PSSSMASSTPLPWQQNTTT-----------------------T 532
           +PP    +   PP PP P  S     P P   ++TT                        
Sbjct: 572 VPPSVPSRAPVPPAPPLPGDSGTIIPPPPAPGDSTTPPPPPPPPPPPPPLPGGVCISSPP 631

Query: 533 TTSAGTG-SIPPWQQQQAAAAASPGAPQMQGNPTMVPLPPGVQPPLPPGAP-----PPPP 586
           +   GT  S PP     A     P  P+  G P+   LP G   P PP  P     PPPP
Sbjct: 632 SLPGGTAISPPPPLSGDATIPPPPPLPEGVGIPSPSSLPGGTAIPPPPPLPGSARIPPPP 691

Query: 587 PPPPGSAGMMYAPPP-------PPPPPMDPSNFVTMMGMGVAGMPPFGMPPAPPPPPP 637
           PP PGSAG+   PPP       PPPPP  P       G G+   PPF   P  PPPPP
Sbjct: 692 PPLPGSAGIPPPPPPLPGEAGMPPPPPPLPG------GPGIPPPPPFPGGPGIPPPPP 743



 Score = 62.8 bits (151), Expect = 9e-10
 Identities = 44/128 (34%), Positives = 51/128 (39%), Gaps = 25/128 (19%)

Query: 535 SAGTGSIPPWQQQQAAAAASPGAPQMQGNPTMVPLPPGVQPPLPPGAPPPPPPPP-PGS- 592
           SA   ++PP    +A    +P  P   G     P  PG     PP  PPPPPPPP PG  
Sbjct: 566 SAAAITVPPSVPSRAPVPPAPPLPGDSGTIIPPPPAPGDSTTPPPPPPPPPPPPPLPGGV 625

Query: 593 ---------AGMMYAPPP--------PPPPPMD-----PSNFVTMMGMGVAGMPPF-GMP 629
                     G   +PPP        PPPPP+      PS      G  +   PP  G  
Sbjct: 626 CISSPPSLPGGTAISPPPPLSGDATIPPPPPLPEGVGIPSPSSLPGGTAIPPPPPLPGSA 685

Query: 630 PAPPPPPP 637
             PPPPPP
Sbjct: 686 RIPPPPPP 693


>gi|47132519 Ras association and pleckstrin homology domains 1
           isoform 1 [Homo sapiens]
          Length = 1250

 Score =  105 bits (261), Expect = 2e-22
 Identities = 113/429 (26%), Positives = 153/429 (35%), Gaps = 88/429 (20%)

Query: 285 AGHIASDC-------KFQRPGDPQSAQDKARMD---KEYLSLMAELGEAPVPASVGSTSG 334
           AGH+ S         +  + G       KARM+   + Y SL+  L   P   +  + S 
Sbjct: 564 AGHVRSQSIVSSVFSEAWKRGTQLEESSKARMESMNRPYTSLVPPLSPQPKIVTPYTASQ 623

Query: 335 PATTPLASAPRPAAPANNPPPPSLMSTTQSRPPWMNSGPSESRPYHGMHGGGPGGPGGGP 394
           P+       P P  P   PPPP     +QS P         + P    +           
Sbjct: 624 PSPPLPPPPPPPPPPPPPPPPPPPPLPSQSAP-----SAGSAAPMFVKYSTITRLQNASQ 678

Query: 395 HS---FPHPLPSLTGGHGGHP-MQHNPNG--PPPPWMQPPPPPMNQGPHPPGHHGPP--P 446
           HS   F  P P +       P +   PNG  PPPP   PPPPP   G         P  P
Sbjct: 679 HSGALFKPPTPPVMQSQSVKPQILVPPNGVVPPPP---PPPPPPTPGSAMAQLKPAPCAP 735

Query: 447 MDQYLGSTPVGSGVYRLHQGKGMMPPPPMGMMPPPPP-----PPSGQP------------ 489
                 + P    ++++     + PP P    PPPPP     PP   P            
Sbjct: 736 SLPQFSAPPPPLKIHQVQHITQVAPPTP----PPPPPIPAPLPPQAPPKPLVTIPAPTST 791

Query: 490 -----------PPPPSGPLPPWQQQQQQPP---PPPPPSSSMASSTP-LPWQQNTTTTTT 534
                      PP P+ P+PP ++Q   P    PP PP+  +    P LP QQ+      
Sbjct: 792 KTVAPVVTQAAPPTPTPPVPPAKKQPAFPASYIPPSPPTPPVPVPPPTLPKQQSFCAKPP 851

Query: 535 SAGTGSIPPWQQQQAAAAASPGAPQMQGNPTMVPLPPGVQPPLPPG-------------A 581
            +    +P   +Q A+    P  P    +  + P+P  V P  PP               
Sbjct: 852 PSPLSPVPSVVKQIASQFPPPPTPPAMESQPLKPVPANVAPQSPPAVKAKPKWQPSSIPV 911

Query: 582 PPPPPPPPPGSAGMMYAPPPP-----PPPPMDPSNFVTMMGMGVAG------MPPFGMPP 630
           P P  PPPP  + +++ PPPP     PPPP  P+   T    G  G        P G   
Sbjct: 912 PSPDFPPPPPESSLVFPPPPPSPVPAPPPPPPPTASPTPDKSGSPGKKTSKTSSPGG--K 969

Query: 631 APPPPPPQN 639
            PPP P +N
Sbjct: 970 KPPPTPQRN 978



 Score = 74.3 bits (181), Expect = 3e-13
 Identities = 97/378 (25%), Positives = 124/378 (32%), Gaps = 75/378 (19%)

Query: 315  SLMAELGEAPVPASVGSTSGPA-------------TTPLASAPRPAAPANNPPP------ 355
            S MA+L  AP   S+   S P                P    P P  PA  PP       
Sbjct: 723  SAMAQLKPAPCAPSLPQFSAPPPPLKIHQVQHITQVAPPTPPPPPPIPAPLPPQAPPKPL 782

Query: 356  ---PSLMSTTQSRPPWMNSGPSESRPYHGMHGGGPGGPGG----GPHSFPHPLPSLTGGH 408
               P+  ST    P    + P    P        P  P       P + P P+P  T   
Sbjct: 783  VTIPAPTSTKTVAPVVTQAAPPTPTPPVPPAKKQPAFPASYIPPSPPTPPVPVPPPT--- 839

Query: 409  GGHPMQHNPNGPPPPWMQPPPPPM-----NQGPHPPGHHGPPPMD-QYLGSTPVGSGVYR 462
               P Q +    PPP    P P +     +Q P PP    PP M+ Q L   P       
Sbjct: 840  --LPKQQSFCAKPPPSPLSPVPSVVKQIASQFPPPPT---PPAMESQPLKPVPANVAPQS 894

Query: 463  LHQGKG---------------MMPPPPMGMM--PPPPPPPSGQPPPPPSGPLPPWQQQQQ 505
                K                  PPPP   +  PPPPP P   PPPPP     P   +  
Sbjct: 895  PPAVKAKPKWQPSSIPVPSPDFPPPPPESSLVFPPPPPSPVPAPPPPPPPTASPTPDKSG 954

Query: 506  QPPPPPPPSSSMASSTPLPWQQNTTTTTTSAGTGSIPPWQQQQAAAAASPGAPQMQGNPT 565
             P      +SS     P P  Q  ++  +S+G     P +    +  +    P   G+P+
Sbjct: 955  SPGKKTSKTSSPGGKKPPPTPQRNSSIKSSSGAEHPEPKRPSVDSLVSKFTPPAESGSPS 1014

Query: 566  MVPLPPGVQPPLPPGAPPPPPPPPPG--SAGMMYAPPPPPPPPMDPSNFVTMMGMGVAGM 623
               LPP   PP  PG         PG    G + A  P             + G G   +
Sbjct: 1015 KETLPPPAAPP-KPGKLNLSGVNLPGVLQQGCVSAKAP------------VLSGRGKDSV 1061

Query: 624  PPFGMPPAP---PPPPPQ 638
              F  PP+    PPPPP+
Sbjct: 1062 VEFPSPPSDSDFPPPPPE 1079



 Score = 49.3 bits (116), Expect = 1e-05
 Identities = 95/448 (21%), Positives = 117/448 (26%), Gaps = 156/448 (34%)

Query: 324  PVPASVGSTSGPATTPLASAPRPAAPANNP-----------PPPSLMSTTQS-------- 364
            PVP +    + PA+    S P P  P   P           PPPS +S   S        
Sbjct: 809  PVPPAKKQPAFPASYIPPSPPTPPVPVPPPTLPKQQSFCAKPPPSPLSPVPSVVKQIASQ 868

Query: 365  -----RPPWMNSGPSESRPYHGMHGGGPG---GPGGGPHSFPHPLPSLTGGHGGHPMQHN 416
                  PP M S P +  P +      P     P   P S P P P          +   
Sbjct: 869  FPPPPTPPAMESQPLKPVPANVAPQSPPAVKAKPKWQPSSIPVPSPDFPPPPPESSLVFP 928

Query: 417  PNGPPPPWMQPPPPPMNQGPHP---------------PGHHGPPPMDQYLGSTPVGSGVY 461
            P  P P    PPPPP    P P               PG   PPP  Q   S    SG  
Sbjct: 929  PPPPSPVPAPPPPPPPTASPTPDKSGSPGKKTSKTSSPGGKKPPPTPQRNSSIKSSSGAE 988

Query: 462  RLHQ---------------------GKGMMPPPPMGMMP--------------------- 479
                                      K  +PPP     P                     
Sbjct: 989  HPEPKRPSVDSLVSKFTPPAESGSPSKETLPPPAAPPKPGKLNLSGVNLPGVLQQGCVSA 1048

Query: 480  ----------------PPPPPPSGQPPPPPSGPLPPWQQQQQQPPPPPPPSSSMASSTPL 523
                            P PP  S  PPPPP   LP         PP   P+    +++P 
Sbjct: 1049 KAPVLSGRGKDSVVEFPSPPSDSDFPPPPPETELP--------LPPIEIPAVFSGNTSP- 1099

Query: 524  PWQQNTTTTTTSAGTGSIPPWQQQQAAAAASPGAPQMQGNPTMVPLPPGVQPPLPPGAPP 583
                       +        W +     A  P  P+   +  +       QP +    P 
Sbjct: 1100 ---------KVAVVNPQPQQWSKMSVKKAPPPTRPKRNDSTRLTQAEISEQPTMATVVPQ 1150

Query: 584  PPPPP------PPG--------------------SAGMMYAP----------PPPPPPPM 607
             P  P       PG                    S+ M  A           PPPPP  +
Sbjct: 1151 VPTSPKSSLSVQPGFLADLNRTLQRKSITRHGSLSSRMSRAEPTATMDDMALPPPPPELL 1210

Query: 608  DPSNFVTMMGMGVAGMPPF--GMPPAPP 633
                     G  ++G      G PPAPP
Sbjct: 1211 SDQQKAGYGGSHISGYATLRRGPPPAPP 1238


>gi|150417989 cyclin K isoform 1 [Homo sapiens]
          Length = 580

 Score =  105 bits (261), Expect = 2e-22
 Identities = 95/323 (29%), Positives = 124/323 (38%), Gaps = 68/323 (21%)

Query: 349 PANNPPPPSLMSTTQSRPPWMNSGPSESRPYHGMHGGGPGGPGGGPHSFPHPLPS----L 404
           P +  P P +    QS+P   +S PS+ +            P   P   P P PS    +
Sbjct: 276 PPSLQPTPQVPQVQQSQPS-QSSEPSQPQQKDPQQPAQQQQPAQQPKK-PSPQPSSPRQV 333

Query: 405 TGGHGGHPMQHNPNGPPPPWMQPPPPPMNQGPHPPGHHGPPPMDQYLGSTPVGSGVYRLH 464
                  P + N    PPP    P  P  +  HPP     PP D+     P+ + +    
Sbjct: 334 KRAVVVSPKEENKAAEPPP----PKIPKIETTHPPLPPAHPPPDR---KPPLAAAL---- 382

Query: 465 QGKGMMPPP------PMGMMPPPP-PPPSGQPPPPPSGPLPPWQQQQQQPPPPPPPSSSM 517
            G+   P P      P   +PPP  P P  QPPP P              PPPPPPSS M
Sbjct: 383 -GEAEPPGPVDATDLPKVQIPPPAHPAPVHQPPPLP------------HRPPPPPPSSYM 429

Query: 518 ASSTPLPWQQNTTTTTTSAGTGSIPPWQQQQAAAAASPGAPQMQGNPTMVPLPPGVQPPL 577
              +        TT++  +G G        +    +    P   G P  +P  P V PP 
Sbjct: 430 TGMS--------TTSSYMSGEGYQSLQSMMKTEGPSYGALPPAYGPPAHLPYHPHVYPPN 481

Query: 578 PPGAPPPPPPP-------PPGSAGMMYAPP------PPPPPPMDPSNFV---TMMGMGV- 620
           PP  P PPPP        PP + G    PP      PPPPP + P++ V      G+G+ 
Sbjct: 482 PPPPPVPPPPASFPPPAIPPPTPGYPPPPPTYNPNFPPPPPRLPPTHAVPPHPPPGLGLP 541

Query: 621 ------AGMPPFGMPPAPPPPPP 637
                   +PP G PP PPP PP
Sbjct: 542 PASYPPPAVPPGGQPPVPPPIPP 564



 Score = 83.2 bits (204), Expect = 7e-16
 Identities = 82/299 (27%), Positives = 99/299 (33%), Gaps = 66/299 (22%)

Query: 326 PASVGSTSGPATTPLASAPRPAAP----------------ANNPPPPSLMSTTQSRPPWM 369
           P        PA  P   +P+P++P                A  PPPP +     + PP  
Sbjct: 307 PQQPAQQQQPAQQPKKPSPQPSSPRQVKRAVVVSPKEENKAAEPPPPKIPKIETTHPPLP 366

Query: 370 NSGPSESRPYHGMHGGGPGGPGGGPHSFPHPLPSLTGGHGGHPMQHNPNGPPPPWMQPPP 429
            + P   R        G   P G   +   P            +Q  P   P P  QPPP
Sbjct: 367 PAHPPPDRKPPLAAALGEAEPPGPVDATDLP-----------KVQIPPPAHPAPVHQPPP 415

Query: 430 PPMNQGPHPPGHH--GPPPMDQYLGSTPVGSGVYRLHQ-------GKGMMPPP--PMGMM 478
            P    P PP  +  G      Y+     G G   L           G +PP   P   +
Sbjct: 416 LPHRPPPPPPSSYMTGMSTTSSYMS----GEGYQSLQSMMKTEGPSYGALPPAYGPPAHL 471

Query: 479 P------PPPPPPSGQPPPPPSGPLPPWQQQQQQPPPPPPPSSSMASSTPLPWQQNTTTT 532
           P      PP PPP   PPPP S P PP         PPPPP+ +     P P        
Sbjct: 472 PYHPHVYPPNPPPPPVPPPPASFP-PPAIPPPTPGYPPPPPTYNPNFPPPPP-------- 522

Query: 533 TTSAGTGSIPPWQQQQAAAAASPGAPQMQGNPTMVPLPPGVQPPLPPGAPPPPPPPPPG 591
                   +PP            G P     P  VP  PG QPP+PP  PPP  PP  G
Sbjct: 523 -------RLPPTHAVPPHPPPGLGLPPASYPPPAVP--PGGQPPVPPPIPPPGMPPVGG 572



 Score = 78.2 bits (191), Expect = 2e-14
 Identities = 77/220 (35%), Positives = 85/220 (38%), Gaps = 55/220 (25%)

Query: 316 LMAELGEAPVPASVGSTSGPATTPLASAPRPAAPAN-----------NPPPPSLMSTTQS 364
           L A LGEA  P  V +T      P    P PA PA             PPPPS   T  S
Sbjct: 378 LAAALGEAEPPGPVDATD----LPKVQIPPPAHPAPVHQPPPLPHRPPPPPPSSYMTGMS 433

Query: 365 RPPWMNSGPSESRPYHGMHGGGPG----GPGGGPHSFPHPLPSLTGGHGGHPMQHNPNGP 420
                 SG         M   GP      P  GP   P  LP        HP  + PN P
Sbjct: 434 TTSSYMSGEGYQSLQSMMKTEGPSYGALPPAYGP---PAHLPY-------HPHVYPPNPP 483

Query: 421 PPPWMQPPP---PPMNQGPHPPGHHGPPPMDQYLGSTPVGSGVYRLHQGKGMMPP--PPM 475
           PPP + PPP   PP    P  PG+  PPP   Y  + P               PP  PP 
Sbjct: 484 PPP-VPPPPASFPPPAIPPPTPGY--PPPPPTYNPNFPPP-------------PPRLPPT 527

Query: 476 GMMPPPPPPPSGQPP---PPPSGPLPPWQQQQQQPPPPPP 512
             +PP PPP  G PP   PPP+  +PP  Q    PP PPP
Sbjct: 528 HAVPPHPPPGLGLPPASYPPPA--VPPGGQPPVPPPIPPP 565



 Score = 65.9 bits (159), Expect = 1e-10
 Identities = 64/232 (27%), Positives = 81/232 (34%), Gaps = 66/232 (28%)

Query: 465 QGKGMMP-------PPPMGMMPPPPPPPSGQPPPPPSG-PLPPWQQQQQQPPPPPPPSSS 516
           QGK  MP         P  + P P  P   Q  P  S  P  P Q+  QQP     P+  
Sbjct: 260 QGKQQMPHHTPHQLQQPPSLQPTPQVPQVQQSQPSQSSEPSQPQQKDPQQPAQQQQPAQQ 319

Query: 517 MASSTPLPWQQNTTTTTTSAGTGSIPPWQQQQAAAAASPGAPQMQGNPTMVPLPPGVQPP 576
               +P P                + P ++ +AA    P  P+++   T  PLPP   PP
Sbjct: 320 PKKPSPQPSSPRQVKRAV-----VVSPKEENKAAEPPPPKIPKIE--TTHPPLPPAHPPP 372

Query: 577 --LPP-----GAPPPPPP-----------PPPGSAGMMYAPPPPP--PPPMDPSNFVTMM 616
              PP     G   PP P           PPP     ++ PPP P  PPP  PS+++T M
Sbjct: 373 DRKPPLAAALGEAEPPGPVDATDLPKVQIPPPAHPAPVHQPPPLPHRPPPPPPSSYMTGM 432

Query: 617 ----------------------GMGVAGMPPFGMPPA---------PPPPPP 637
                                 G     +PP   PPA         PP PPP
Sbjct: 433 STTSSYMSGEGYQSLQSMMKTEGPSYGALPPAYGPPAHLPYHPHVYPPNPPP 484



 Score = 65.5 bits (158), Expect = 1e-10
 Identities = 58/193 (30%), Positives = 76/193 (39%), Gaps = 50/193 (25%)

Query: 461 YRLHQGKGMMPPPPMGMMPPPPPPPSGQPPPPPS-GPLPPWQQQQ--QQPPPPPPPSSSM 517
           ++L Q   + P P +  +    P  S +P  P    P  P QQQQ  QQP  P P  SS 
Sbjct: 271 HQLQQPPSLQPTPQVPQVQQSQPSQSSEPSQPQQKDPQQPAQQQQPAQQPKKPSPQPSS- 329

Query: 518 ASSTPLPWQQNTTTTTTSAGTGSIPPWQQQQAAAAASPGAPQMQGNPTMVPLPPGVQPPL 577
                 P Q              + P ++ +AA    P  P+++             PPL
Sbjct: 330 ------PRQVKRAVV--------VSPKEENKAAEPPPPKIPKIETT----------HPPL 365

Query: 578 PPGAPPPPPPPPPGSAGMMYAPPPPP-----------PPPMDPSNFVTMMGMGVAGMPPF 626
           PP A PPP   PP +A +  A PP P           PPP  P+         V   PP 
Sbjct: 366 PP-AHPPPDRKPPLAAALGEAEPPGPVDATDLPKVQIPPPAHPAP--------VHQPPP- 415

Query: 627 GMPPAPPPPPPQN 639
            +P  PPPPPP +
Sbjct: 416 -LPHRPPPPPPSS 427


>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
           sapiens]
          Length = 816

 Score =  103 bits (258), Expect = 4e-22
 Identities = 97/366 (26%), Positives = 125/366 (34%), Gaps = 60/366 (16%)

Query: 322 EAPVPASVGSTSGPATTPLASAPR----PAAPANNPPPPSLMSTTQSRPPWMNS------ 371
           + P   S+ S++ P ++P  S P     P APA+ P  P        RPP +        
Sbjct: 226 QRPASRSLSSSATPLSSPARSGPSARGTPRAPAH-PSQPKPKGLQALRPPQVTPPRKDAA 284

Query: 372 ---GPSESRPYHGMHGGGPGGPGGGP--HSFPHP-------------LPSLTGGHGGHPM 413
              GP  S P        P  P   P   + P P              P+L   H   P 
Sbjct: 285 PALGPLSSSPLATPSPSAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPS 344

Query: 414 QH-NPNGPPPPWMQPPP----PPMNQGPHPPGHHGPPPMDQYLGSTPVGSGVYRLHQGKG 468
              +P   PPP  Q PP    PP+   P PP     PP+      +P       +H  + 
Sbjct: 345 PPLSPLATPPP--QAPPALALPPLQAPPSPPAS---PPLSPLATPSPQAPNALAVHLLQA 399

Query: 469 MMPPPP----MGMMPPPPPPPSGQPPPPPSGPLPPWQQQQQQPPPPPPPSSSMASSTPLP 524
              PPP         PP  PP      PPS   P       Q PP PP S  M+ S   P
Sbjct: 400 PFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPP 459

Query: 525 WQQNTTTTTTSAGTGSIPPWQQQQAAAAASPGAPQMQGN-PTMVPLPPGVQPPLPPGAPP 583
            Q               PP      A       P    + P   P  P    P+ P A P
Sbjct: 460 PQAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATP 519

Query: 584 PPPPPPPGSAGMMYAPPPPP----------PPPMDPSNFVTMMGMGVAGMPPFGMPPAPP 633
           PP  PP  +A ++  PP PP          PP   P   V+   + +A      + P PP
Sbjct: 520 PPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLA------LAPGPP 573

Query: 634 PPPPQN 639
           PPP ++
Sbjct: 574 PPPSRS 579



 Score = 73.9 bits (180), Expect = 4e-13
 Identities = 89/314 (28%), Positives = 110/314 (35%), Gaps = 60/314 (19%)

Query: 325 VPASVGSTSGPATTPLASAPRPAAPANNPPPPSLMSTTQSRPPWMNSGPSESRPYHGMHG 384
           +P      S PA+ PL+    P+  A N     L+    S PP     P    P+     
Sbjct: 363 LPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPP----SPPVQAPF----- 413

Query: 385 GGPGGPGGGPHSFP--HPLPSLTGGHGGHPMQHNPNGPPPPWMQPPPPPMNQGPHP---- 438
             P  P   P + P     PSL       P+Q  P+ P  P M P   P  Q P P    
Sbjct: 414 SPPASPPVSPSATPPSQAPPSLAAP----PLQVPPSPPASPPMSPSATPPPQAPPPLAAP 469

Query: 439 ------PGHHGPP----PMDQYLGSTPVGSGVYRLHQGKGMMPPPPMGMMPPPPPPPSGQ 488
                 P    PP    P  Q L S P              +P  P+   PP  PP    
Sbjct: 470 PLQLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAA 529

Query: 489 P--PPPPSGPLPPWQQQQQQPP--------------------PPPPPSSSMAS--STPLP 524
           P    PPS P  P  Q  ++PP                    PPPPPS S +S  S P  
Sbjct: 530 PLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDL 589

Query: 525 WQQNTTTTTTSAGTGSIPPWQQQQAAAAASPGAPQMQGNPTMVPLPPGVQPPL----PPG 580
              +++ T+T           +  AAA+  P A     +P      P   PPL     PG
Sbjct: 590 AGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAACHPAAWSRGPA--PPLAFRGAPG 647

Query: 581 APPP-PPPPPPGSA 593
           AP P PP   PGSA
Sbjct: 648 APLPWPPATGPGSA 661



 Score = 63.9 bits (154), Expect = 4e-10
 Identities = 88/377 (23%), Positives = 117/377 (31%), Gaps = 88/377 (23%)

Query: 336 ATTPLASAP---RPAAPANNPPPPSLMSTTQSRPPWMNSGPSESRPYHGMHGGGPGGPGG 392
           A TP A AP    P  P +  PPP +   T +    + +  +  R       GG GG   
Sbjct: 14  ARTPAARAPGLLTPRPPGSPRPPPPV---TPAALRVLGAAGAVGRKPLAERAGGIGG-AT 69

Query: 393 GPHSFPHPLPSLTGGHGGHPMQHNPNGPPPPWMQPPPPPMNQGPHPPGHHGPPPMDQYLG 452
            P S P   P+ T      P         PP     P P++      G   P P+ Q   
Sbjct: 70  IPESAPRAGPTRTS----RPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGL 125

Query: 453 STPVGSGVYRLHQGKGMMPP---------------PPMGMMPP---------------PP 482
                  V R   GK    P               P  G   P               P 
Sbjct: 126 RISAEETVAR---GKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPR 182

Query: 483 PPPSGQPPPPPSGPLPPWQQQQQQPPPPPPPSSSMASSTPLPWQQNTTTTTTSAGTGSIP 542
           P PS +P PP  GP        +     P P++    S     Q+  + + +S+ T    
Sbjct: 183 PAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSS 242

Query: 543 PWQQQQAA-----AAASPGAPQMQGNPTMVPLPPGVQPPLPPGAP--------------- 582
           P +   +A     A A P  P+ +G   +   PP V PP    AP               
Sbjct: 243 PARSGPSARGTPRAPAHPSQPKPKGLQAL--RPPQVTPPRKDAAPALGPLSSSPLATPSP 300

Query: 583 -PPPPPPPPGSAGMMYAPPPPPP---------------------PPMDPSNFVTMMGMGV 620
             PP P  P S   + +PP  PP                     PP+ P           
Sbjct: 301 SAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPA 360

Query: 621 AGMPPFGMPPAPPPPPP 637
             +PP   PP+PP  PP
Sbjct: 361 LALPPLQAPPSPPASPP 377



 Score = 59.7 bits (143), Expect = 8e-09
 Identities = 78/316 (24%), Positives = 100/316 (31%), Gaps = 98/316 (31%)

Query: 320 LGEAPVPASVGSTSGPATTPLASAPRPAAPANNPPPPSLMSTTQSRPPWMNSGPSESRPY 379
           L   P+       + P  +P A+ P  A P    PP  L       PP + + P ++ P 
Sbjct: 435 LAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALATPPLQALP- 493

Query: 380 HGMHGGGPGGPGGGPHSFPHPLP-SLTGGHGGHPMQHNPNGPPP----PWMQ-PPPPPMN 433
                         P SFP   P S +      P+   P   PP    P +Q PP PP +
Sbjct: 494 ------------SPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPAS 541

Query: 434 ---QGPHPPGHHGPPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPMGMMPPPPPPPSGQPP 490
              Q P  P   GP         T V              P   + + P PPPPPS  P 
Sbjct: 542 PTLQAPRRPPTPGP--------DTSVSG------------PRLTLALAPGPPPPPSRSPS 581

Query: 491 PPPSGPLPPWQQQQQQPPP----------------PPPPSSSMASSTPLPWQQNTTTTTT 534
              SGP            P                 PPP + +A+  P  W +       
Sbjct: 582 STLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAACHPAAWSR------- 634

Query: 535 SAGTGSIPPWQQQQAAAAASPGAPQMQGNPTMVPLPPGVQPPL------------PPGAP 582
               G  PP      A   +PGAP        +P PP   P              P  A 
Sbjct: 635 ----GPAPP-----LAFRGAPGAP--------LPWPPATGPGSADGLCTIYETEGPESAT 677

Query: 583 PPP----PPPPPGSAG 594
           P P    P P PG++G
Sbjct: 678 PAPGALDPGPSPGTSG 693


>gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Homo
           sapiens]
          Length = 247

 Score =  103 bits (256), Expect = 6e-22
 Identities = 75/213 (35%), Positives = 85/213 (39%), Gaps = 34/213 (15%)

Query: 410 GHPMQHNPNGPPPPWMQPPPPPMNQGPHPPGHHG----PPPMDQYLGSTPVGSGVYR--- 462
           G P    P G   P   PPPP   QGP P G +     PPP  +  G  P G    +   
Sbjct: 34  GKPEGRRPQGGNQPQRPPPPPGKPQGPPPQGGNQSQGPPPPPGKPEGRPPQGGNQSQGPP 93

Query: 463 LHQGKGMMPPPPMGMMPPPPPPPSGQPPPPPSGPLPPWQQQQQQPPPPP------PPSSS 516
            H GK   PPP  G      PPP G+P  PP    P    Q  +PPPPP      PP   
Sbjct: 94  PHPGKPERPPPQGGNQSQGTPPPPGKPERPP----PQGGNQSHRPPPPPGKPERPPPQGG 149

Query: 517 MASSTPLPWQQNTTTTTTSAGTGSIPPWQQQQAAAAASP-----GAPQMQGNPTMVPLPP 571
             S  P P                 PP +  ++ +A SP     G PQ +GN    P PP
Sbjct: 150 NQSQGPPPHPGKPEGP---------PPQEGNKSRSARSPPGKPQGPPQQEGNKPQGPPPP 200

Query: 572 GV-QPPLPPGAPPPPPPPPPGSAGMMYAPPPPP 603
           G  Q P P G  P  P  PP  AG    PPPPP
Sbjct: 201 GKPQGPPPAGGNPQQPQAPP--AGKPQGPPPPP 231



 Score = 78.2 bits (191), Expect = 2e-14
 Identities = 64/196 (32%), Positives = 65/196 (33%), Gaps = 42/196 (21%)

Query: 463 LHQGKGMMPPPPMGMMPPPPPPPSGQPPPPPSGPLPPWQQQQQQPPPPP------PPSSS 516
           L  GK     P  G  P  PPPP G+P  PP    P    Q Q PPPPP      PP   
Sbjct: 31  LISGKPEGRRPQGGNQPQRPPPPPGKPQGPP----PQGGNQSQGPPPPPGKPEGRPPQGG 86

Query: 517 MASSTPLPWQQNTTTTTTSAGTGSIPPWQQQQAAAAASPGAPQMQGNPTMVPLPPGVQPP 576
             S  P P            G    PP Q        S G P   G P   P   G Q  
Sbjct: 87  NQSQGPPP----------HPGKPERPPPQ----GGNQSQGTPPPPGKPERPPPQGGNQSH 132

Query: 577 LPPGAPPPPPPPPPGSAGMMYAPPP-------PPP-----------PPMDPSNFVTMMGM 618
            PP  P  P  PPP        PPP       PPP           PP  P       G 
Sbjct: 133 RPPPPPGKPERPPPQGGNQSQGPPPHPGKPEGPPPQEGNKSRSARSPPGKPQGPPQQEGN 192

Query: 619 GVAGMPPFGMPPAPPP 634
              G PP G P  PPP
Sbjct: 193 KPQGPPPPGKPQGPPP 208



 Score = 77.8 bits (190), Expect = 3e-14
 Identities = 67/202 (33%), Positives = 76/202 (37%), Gaps = 42/202 (20%)

Query: 345 RPAAPANNPPPPSLMSTTQSRPPWMNSGPSESRPYHGMHGGGPGGPGGGPHSFPHPLPSL 404
           RP  P   P  P      QS+ P    G  E RP  G    G    G  PH      P  
Sbjct: 49  RPPPPPGKPQGPPPQGGNQSQGPPPPPGKPEGRPPQG----GNQSQGPPPHPGKPERPPP 104

Query: 405 TGGH---GGHPMQHNPNGPPPPW----MQPPPPP------------MNQGP--HPPGHHG 443
            GG+   G  P    P  PPP       +PPPPP             +QGP  HP    G
Sbjct: 105 QGGNQSQGTPPPPGKPERPPPQGGNQSHRPPPPPGKPERPPPQGGNQSQGPPPHPGKPEG 164

Query: 444 PPPMD---QYLGSTPVGS--GVYRLHQGKGMMPPPPMGMMPPPPP---------PPSGQP 489
           PPP +        +P G   G  +    K   PPPP     PPP          PP+G+P
Sbjct: 165 PPPQEGNKSRSARSPPGKPQGPPQQEGNKPQGPPPPGKPQGPPPAGGNPQQPQAPPAGKP 224

Query: 490 ---PPPPSGPLPPWQQQQQQPP 508
              PPPP G  PP   Q QQPP
Sbjct: 225 QGPPPPPQGGRPPRPAQGQQPP 246



 Score = 69.7 bits (169), Expect = 8e-12
 Identities = 59/203 (29%), Positives = 70/203 (34%), Gaps = 39/203 (19%)

Query: 322 EAPVPASVGSTSGPATTPLASAPRPAAPANNP------------PPPSLMSTTQSRPPWM 369
           + P P     + GP   P     RP    N              PPP   + +Q  PP  
Sbjct: 58  QGPPPQGGNQSQGPPPPPGKPEGRPPQGGNQSQGPPPHPGKPERPPPQGGNQSQGTPPPP 117

Query: 370 NSGPSESRPYHGMHGGGPGGPGGGPHSFPHPLPSLTGGHGGHPMQHNPNGPPP------- 422
              P    P  G     P  P G P   P    + + G   HP +  P GPPP       
Sbjct: 118 GK-PERPPPQGGNQSHRPPPPPGKPERPPPQGGNQSQGPPPHPGK--PEGPPPQEGNKSR 174

Query: 423 ----PWMQPPPPPMNQGPHPPGHHGPPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPMGMM 478
               P  +P  PP  +G  P    GPPP  +  G  P G        G    P  P    
Sbjct: 175 SARSPPGKPQGPPQQEGNKP---QGPPPPGKPQGPPPAG--------GNPQQPQAPPAGK 223

Query: 479 P--PPPPPPSGQPPPPPSGPLPP 499
           P  PPPPP  G+PP P  G  PP
Sbjct: 224 PQGPPPPPQGGRPPRPAQGQQPP 246



 Score = 43.5 bits (101), Expect = 6e-04
 Identities = 26/67 (38%), Positives = 26/67 (38%), Gaps = 5/67 (7%)

Query: 572 GVQPPLPPGAPPPPPPPPPGSAGMMYAPPPPPPPPMDPSNFVTMMGMGVAGMPPFGMPPA 631
           G QP  PP  P  P  PPP        PPPPP     P       G    G PP   P  
Sbjct: 44  GNQPQRPPPPPGKPQGPPPQGGNQSQGPPPPPG---KPEGRPPQGGNQSQGPPPH--PGK 98

Query: 632 PPPPPPQ 638
           P  PPPQ
Sbjct: 99  PERPPPQ 105



 Score = 43.1 bits (100), Expect = 8e-04
 Identities = 32/83 (38%), Positives = 33/83 (39%), Gaps = 23/83 (27%)

Query: 574 QPPLPPGAP--PPP--------PPPPPGSAGMMYAPPP--------PPPPPMDPSNFVTM 615
           +PP PPG P  PPP        PPPPPG        PP        PPP P  P      
Sbjct: 49  RPPPPPGKPQGPPPQGGNQSQGPPPPPGKPE---GRPPQGGNQSQGPPPHPGKPERPPPQ 105

Query: 616 MGMGVAGMPPFGMPPAPPPPPPQ 638
            G    G PP   P  P  PPPQ
Sbjct: 106 GGNQSQGTPP--PPGKPERPPPQ 126


>gi|162329583 cleavage and polyadenylation specific factor 6, 68 kD
           subunit [Homo sapiens]
          Length = 551

 Score =  102 bits (254), Expect = 1e-21
 Identities = 91/271 (33%), Positives = 98/271 (36%), Gaps = 60/271 (22%)

Query: 382 MHGGGPGGPGGGPHSFPHP--------LPSLTGGHGGHPMQHNPNGPPPPW---MQPPPP 430
           M G G  GP GG      P         P    G    P    P GPPPP+     PP P
Sbjct: 180 MSGEGKAGPPGGSSRAAFPQGGRGRGRFPGAVPGGDRFPGPAGPGGPPPPFPAGQTPPRP 239

Query: 431 PMNQGPHPPGHHGPPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPMGMMPPPPPPPSGQP- 489
           P+   P PPG  GPPP  Q L     G              PP  G  PPPP    GQP 
Sbjct: 240 PLGP-PGPPGPPGPPPPGQVLPPPLAG--------------PPNRGDRPPPPVLFPGQPF 284

Query: 490 PPPPSGPLPPWQQQQQQPPPPPPPSSSMASSTPLPWQQNTTTTTTSAGTGSIPPWQQQQA 549
             PP GPLPP        PPPP P        P P Q            G  PP      
Sbjct: 285 GQPPLGPLPPG-------PPPPVPGYGPPPGPPPPQQ------------GPPPP------ 319

Query: 550 AAAASPGAPQMQGNPTMVPLPPGVQPPLPPGAPPPPPP------PPPGSAGMMYAPPPPP 603
                P  P   G P  +  PP +  P PPGAPPP P       PPP ++GM  +    P
Sbjct: 320 PGPFPPRPPGPLGPPLTLAPPPHLPGP-PPGAPPPAPHVNPAFFPPPTNSGMPTSDSRGP 378

Query: 604 PPPMDPSNFVTMMGMGVAGMPPFGMPPAPPP 634
            PP DP         G  G P   M  A  P
Sbjct: 379 -PPTDPYGRPPPYDRGDYGPPGREMDTARTP 408



 Score = 92.4 bits (228), Expect = 1e-18
 Identities = 72/213 (33%), Positives = 81/213 (38%), Gaps = 48/213 (22%)

Query: 428 PPPPMNQGPHPPGHHGPPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPMGMMPPPPPPPSG 487
           PP   ++   P G  G     ++ G+ P G              P P G   PPPP P+G
Sbjct: 188 PPGGSSRAAFPQGGRG---RGRFPGAVPGGDRF-----------PGPAGPGGPPPPFPAG 233

Query: 488 QPPP-PPSGPLPPWQQQQQQPPPPPPPSSSMASSTPLPWQQNTTTTTTSAGTGSIPPWQQ 546
           Q PP PP GP  P       P PP PP        PL    N          G  PP   
Sbjct: 234 QTPPRPPLGPPGP-------PGPPGPPPPGQVLPPPLAGPPNR---------GDRPP--- 274

Query: 547 QQAAAAASPGAPQMQGNPTMVPLPPGVQPPLPPGAPPPPPPPPPGSAGMMYAPPPPPPPP 606
                   PG P   G P + PLPPG  PP+P   PPP PPPP          PPPPP P
Sbjct: 275 ---PPVLFPGQPF--GQPPLGPLPPGPPPPVPGYGPPPGPPPPQQG-------PPPPPGP 322

Query: 607 MDPSNFVTMMGMGVAGMPPF--GMPPAPPPPPP 637
             P     +        PP   G PP  PPP P
Sbjct: 323 FPPRPPGPLGPPLTLAPPPHLPGPPPGAPPPAP 355



 Score = 82.8 bits (203), Expect = 9e-16
 Identities = 64/188 (34%), Positives = 73/188 (38%), Gaps = 23/188 (12%)

Query: 321 GEAPVPASVGSTSGPATTPLASAPRPAAPANNPPPPSLMSTTQSRPPWMNSGPSESRPYH 380
           G  P P   G T  P   PL   P P  P   PPP  ++    + PP     P     + 
Sbjct: 224 GGPPPPFPAGQT--PPRPPLGP-PGPPGPPGPPPPGQVLPPPLAGPPNRGDRPPPPVLFP 280

Query: 381 GMHGGGPGGPGGGPHSFPHPLPSLTGGHGGHPMQHNPNGPPPPWMQPPPPPMNQGPHPPG 440
           G   G P   G  P   P P+P    G+G  P      GPPPP   PPPPP    P PPG
Sbjct: 281 GQPFGQPP-LGPLPPGPPPPVP----GYGPPP------GPPPPQQGPPPPPGPFPPRPPG 329

Query: 441 HHGPP---PMDQYLGSTPVGSGVYRLHQGKGMMPPPPMGMMP------PPPPPPSGQPPP 491
             GPP       +L   P G+     H      PPP    MP      PPP  P G+PPP
Sbjct: 330 PLGPPLTLAPPPHLPGPPPGAPPPAPHVNPAFFPPPTNSGMPTSDSRGPPPTDPYGRPPP 389

Query: 492 PPSGPLPP 499
              G   P
Sbjct: 390 YDRGDYGP 397



 Score = 82.0 bits (201), Expect = 2e-15
 Identities = 74/226 (32%), Positives = 88/226 (38%), Gaps = 29/226 (12%)

Query: 364 SRPPWMNSGPSESRPYHGMHGG----GPGGPGGGPHSFPH----PLPSLTGGHGGHPMQH 415
           SR  +   G    R    + GG    GP GPGG P  FP     P P L     G P   
Sbjct: 193 SRAAFPQGGRGRGRFPGAVPGGDRFPGPAGPGGPPPPFPAGQTPPRPPL-----GPPGPP 247

Query: 416 NPNGPPPPWMQPPPP---PMNQGPHPPGHHGPPPM--DQYLGSTPVGS---GVYRLHQGK 467
            P GPPPP    PPP   P N+G  PP    PP +   Q  G  P+G    G      G 
Sbjct: 248 GPPGPPPPGQVLPPPLAGPPNRGDRPP----PPVLFPGQPFGQPPLGPLPPGPPPPVPGY 303

Query: 468 GMMP-PPPMGMMPPPPPPPSGQPPPPPSGP---LPPWQQQQQQPPPPPPPSSSMASSTPL 523
           G  P PPP    PPPPP P    PP P GP   L P       PP  PPP+  +  +   
Sbjct: 304 GPPPGPPPPQQGPPPPPGPFPPRPPGPLGPPLTLAPPPHLPGPPPGAPPPAPHVNPAFFP 363

Query: 524 PWQQNTTTTTTSAGTGSIPPWQQQQAAAAASPGAPQMQGNPTMVPL 569
           P   +   T+ S G     P+ +         G P  + +    PL
Sbjct: 364 PPTNSGMPTSDSRGPPPTDPYGRPPPYDRGDYGPPGREMDTARTPL 409



 Score = 50.1 bits (118), Expect = 6e-06
 Identities = 45/155 (29%), Positives = 57/155 (36%), Gaps = 24/155 (15%)

Query: 321 GEAPVPASV--GSTSG-PATTPLASAPRPAAPANNPPP---------PSLMSTTQSRPPW 368
           G+ P P  +  G   G P   PL   P P  P   PPP         P        RPP 
Sbjct: 270 GDRPPPPVLFPGQPFGQPPLGPLPPGPPPPVPGYGPPPGPPPPQQGPPPPPGPFPPRPPG 329

Query: 369 MNSGPSESRPYHGMHGGGPGGPGGGPHSFPHPLPSLTGGHGGHPMQHNPNGPPP--PWMQ 426
               P    P   + G  PG P   PH  P   P  T  + G P   +  GPPP  P+ +
Sbjct: 330 PLGPPLTLAPPPHLPGPPPGAPPPAPHVNPAFFPPPT--NSGMPTSDS-RGPPPTDPYGR 386

Query: 427 PPPPPMNQGPHPPGHHGPPPMDQYLGSTPVGSGVY 461
           PPP       +  G +GPP  +     TP+    +
Sbjct: 387 PPP-------YDRGDYGPPGREMDTARTPLSEAEF 414


>gi|163965366 nascent polypeptide-associated complex alpha subunit
            isoform a [Homo sapiens]
          Length = 2078

 Score =  101 bits (252), Expect = 2e-21
 Identities = 98/343 (28%), Positives = 123/343 (35%), Gaps = 54/343 (15%)

Query: 323  APVPASV------GSTSGPATTPLASAPRPAAPANNPPPPS-----LMSTTQSRPPWMNS 371
            AP P++V      G T  P  TP  S      P   P  P+      +S T S P    +
Sbjct: 864  APTPSAVTPLSPKGVTLPPKETPTPSVVNLPFPKEGPATPAPKQAPALSMTSSSPKKARA 923

Query: 372  GPSESRPYHGMHGGGPGGPGGGPHSFPHPLPSLTGGHGGHPMQHNPNGPPPPWMQPPPPP 431
             P+          G P  P   P   P P  +      G P   +P   P P    PP P
Sbjct: 924  TPAPK--------GIPASPS--PKGAPTPPAATPPSPKGGPATPSPKWAPTPPAATPPSP 973

Query: 432  MNQGPHPPGHHGPPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPMGMMPPPPPPPSGQPPP 491
               GP  P   G P        +P G          G   P P G     P PP+  PP 
Sbjct: 974  KG-GPATPSPKGAPTPPAATPPSPKG----------GPATPSPKG----APTPPAVTPPS 1018

Query: 492  PPSGP-LPPWQQQQQQPPPPPPPS-SSMASSTPLPWQQNTT---TTTTSAGTGSIPPWQQ 546
            P   P   P+ +    PP   PPS     ++TPLP    TT   T  +  G  + P  + 
Sbjct: 1019 PKGSPAATPFPKGASTPPAATPPSPKGSPAATPLPKGAPTTPAATLPSPKGGPATPSLKG 1078

Query: 547  QQAAAAASPGAPQ---MQGNPTMVPLPPGVQPPLP---------PGAPPPPPPPPPGSAG 594
                 AA+P +P+      +P   P+PP   PP P          GAP  P   PP   G
Sbjct: 1079 APTPPAATPPSPKGGPATPSPKGAPMPPAATPPSPKGGLATPPHKGAPTTPAATPPSPKG 1138

Query: 595  MMYAPPPPPPPPMDPSNFVTMMGMGVAGMPPFGMPPAPPPPPP 637
             + A PPP   P  P+        G+A  PP G P  P   PP
Sbjct: 1139 GL-ATPPPKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPP 1180



 Score = 95.1 bits (235), Expect = 2e-19
 Identities = 108/386 (27%), Positives = 131/386 (33%), Gaps = 66/386 (17%)

Query: 298  GDPQSAQDKARMDKEYLSLMAELGEAPVPASVGSTSGPATT-------PLASAPR--PAA 348
            G P S   K        +  +  G    P+   + + PA T       P   +P+  P  
Sbjct: 929  GIPASPSPKGAPTPPAATPPSPKGGPATPSPKWAPTPPAATPPSPKGGPATPSPKGAPTP 988

Query: 349  PANNPPPPSLMSTTQS----------RPPWMNSGPSESRPYHGMH---GGGPGGPGGGPH 395
            PA  PP P     T S           PP     P+ +    G        P  P G P 
Sbjct: 989  PAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPAATPFPKGASTPPAATPPSPKGSPA 1048

Query: 396  SFPHP----------LPSLTGGHGGHPMQHNPNGPPPPWMQPPPPPMNQGPHPPGHHGPP 445
            + P P          LPS  GG    P   +  G P P    PP P   GP  P   G P
Sbjct: 1049 ATPLPKGAPTTPAATLPSPKGG----PATPSLKGAPTPPAATPPSPKG-GPATPSPKGAP 1103

Query: 446  PMDQYLGSTPVGSGVYRLHQG----KGMMPPPPMGMMPPPPP-----PPSGQPPPPPSGP 496
                    +P G      H+G        PP P G +  PPP      P+  PP P  G 
Sbjct: 1104 MPPAATPPSPKGGLATPPHKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGL 1163

Query: 497  LPPWQQQQQQPPPPPPPSSSMASSTPLPWQQNTTTTTTSAGTGSIPPWQQQQAAAAASPG 556
              P  +     P   PPS     +TP P    TT   T       PP  +   A  +  G
Sbjct: 1164 ATPPPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAAT-------PPSPKGGLATPSPKG 1216

Query: 557  APQMQGNPTMVPLPP--GVQPPLPPGAPPPPPPPPPGSAGMMYAPPP---PPPPPMDPSN 611
            AP     P   P  P  G+  P P GAP  P   PP   G    PPP   P PP   P +
Sbjct: 1217 APT---TPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGPATPPPKGAPTPPAATPPS 1273

Query: 612  FVTMMGMGVAGMPPFGMP-PAPPPPP 636
                +  G+A  P  G P PA   PP
Sbjct: 1274 ----LKGGLATPPHKGAPNPAVVTPP 1295



 Score = 93.6 bits (231), Expect = 5e-19
 Identities = 106/396 (26%), Positives = 127/396 (32%), Gaps = 83/396 (20%)

Query: 317  MAELGEAP-VPASVGSTS-GPATTP------------LASAPRPAAPANNPPPPSLMSTT 362
            +A L  AP +P SV S S  PA TP             A AP  ++P   P   S  S T
Sbjct: 721  LATLVLAPEIPKSVPSPSLPPAGTPPGTKKVDGISHTSALAPVASSPKECPTEDSGASAT 780

Query: 363  QSR------------PPWMNSGPSESRPYHGMHGGGPGGPGGGPHSFPHPLP-------- 402
             S             P  ++  P   RP       GP  P G   S   P+         
Sbjct: 781  ASSKGTLTYLADSPSPLGVSVSPQTKRPPTKKGSAGPDTPIGNLSSPVSPVEASFLPENS 840

Query: 403  -SLTGGHGGHPMQHNPNGPPP--------------------PWMQPPPPPMN-----QGP 436
             S  G        H+P  P P                    P   P P  +N     +GP
Sbjct: 841  LSFQGSKDSPATTHSPTPPSPKGAPTPSAVTPLSPKGVTLPPKETPTPSVVNLPFPKEGP 900

Query: 437  HPPGHHGPPPMDQYLGS------TPVGSGVYRLHQGKGMMPPPPMGMMPPP--------- 481
              P     P +     S      TP   G+      KG  P PP    P P         
Sbjct: 901  ATPAPKQAPALSMTSSSPKKARATPAPKGIPASPSPKGA-PTPPAATPPSPKGGPATPSP 959

Query: 482  ---PPPPSGQPPPPPSGPLPPWQQQQQQPPPPPPPSSSMASSTPLPWQQNTTTTTTSAGT 538
               P PP+  PP P  GP  P  +    PP   PPS     +TP P    T    T    
Sbjct: 960  KWAPTPPAATPPSPKGGPATPSPKGAPTPPAATPPSPKGGPATPSPKGAPTPPAVTPPSP 1019

Query: 539  GSIPPWQQQQAAAAASPGA--PQMQGNPTMVPLPPGVQPPLPPGAPPPPPPPPPGSAGMM 596
               P        A+  P A  P  +G+P   PLP G   P  P A  P P   P +  + 
Sbjct: 1020 KGSPAATPFPKGASTPPAATPPSPKGSPAATPLPKGA--PTTPAATLPSPKGGPATPSLK 1077

Query: 597  YAPPPPPPPPMDPSNFVTMMGMGVAGMPPFGMPPAP 632
             AP PP   P  P           A MPP   PP+P
Sbjct: 1078 GAPTPPAATPPSPKGGPATPSPKGAPMPPAATPPSP 1113



 Score = 93.2 bits (230), Expect = 7e-19
 Identities = 97/348 (27%), Positives = 117/348 (33%), Gaps = 50/348 (14%)

Query: 326  PASVGSTSGPATTPLASAPRPAAPANNPPPPSLMSTTQSRPPWMNSGPSESRPYHGMHGG 385
            PA+     G  TTP A+ P P      P      +   + PP    GP+   P      G
Sbjct: 1047 PAATPLPKGAPTTPAATLPSPKGGPATPSLKGAPTPPAATPPSPKGGPATPSPK-----G 1101

Query: 386  GPGGPGGGPHSFPHPLPSL-TGGHGGHPMQHNPNGPPPPWMQPPPPPMNQGPHPPGHHGP 444
             P  P   P   P P   L T  H G P       P P      PPP    P  P    P
Sbjct: 1102 APMPPAATP---PSPKGGLATPPHKGAPTTPAATPPSPKGGLATPPPKG-APTTPAATPP 1157

Query: 445  PPMDQYLGSTPVGSGVYRLHQGKGMMPPPPMGMMPPPPPP-----PSGQPPPPPSGPLPP 499
             P        P G+            PP P G +  P P      P+  PP P  G   P
Sbjct: 1158 SPKGGLATPPPKGAPTT-----PAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATP 1212

Query: 500  WQQQQQQPPPPPPPSSSMASSTPLPWQQNTT---TTTTSAGTGSIPPWQQQQAAAAASPG 556
              +     P   PPS     +TP P    TT   T  +  G  + PP +      AA+P 
Sbjct: 1213 SPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGPATPPPKGAPTPPAATP- 1271

Query: 557  APQMQG-----------NPTMV--PLPPGVQPPLPP-GAPPPPPPPPPGSAGMMYAPPP- 601
             P ++G           NP +V  P P G     PP GAP PP   PP   G    PPP 
Sbjct: 1272 -PSLKGGLATPPHKGAPNPAVVTPPSPKGGPATSPPKGAPTPPAATPPSPKGSPGTPPPK 1330

Query: 602  --PPPPPMDPSN--------FVTMMGMGVAGMPPFGMPPAPPPPPPQN 639
              P PP + P +          T    G    P     P PP   P +
Sbjct: 1331 GAPTPPAVTPPSPKGTPTLPATTPSSKGGPTTPSSKEGPTPPAATPSH 1378



 Score = 88.6 bits (218), Expect = 2e-17
 Identities = 90/331 (27%), Positives = 104/331 (31%), Gaps = 67/331 (20%)

Query: 334  GPATTPLASAPRPAAPANNPPPPSLMSTTQSRPPWMNSGPSESRPYHGMHGGGPGGPGGG 393
            G  TTP A+ P P      PPP    +T  + PP    G +   P      G P  P   
Sbjct: 1124 GAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPPPK-----GAPTTPAAT 1178

Query: 394  PHSFPHPLPSLTGGHGGHPMQHNPNGPPPPWMQPPPPPMNQGPHPPGHHGPPPMDQYLGS 453
            P       PS  GG        +P G P      PP P   G   P   G P        
Sbjct: 1179 P-------PSPKGGLA----TPSPKGAPTTPAATPPSPKG-GLATPSPKGAPTTPAATPP 1226

Query: 454  TPVGSGVYRLHQGKGMMPPPPMGMMPPPPPPPSGQPPPPPSGPLPPWQQQQQQPPPPPPP 513
            +P G          G+  P P G     P  P+  PP P  GP  P  +    PP   PP
Sbjct: 1227 SPKG----------GLATPSPKGA----PTTPAATPPSPKGGPATPPPKGAPTPPAATPP 1272

Query: 514  SSSMASSTP----LPWQQNTTTTTTSAGTGSIPPWQQQQAAAAA------SPGAPQMQGN 563
            S     +TP     P     T  +   G  + PP       AA       SPG P  +G 
Sbjct: 1273 SLKGGLATPPHKGAPNPAVVTPPSPKGGPATSPPKGAPTPPAATPPSPKGSPGTPPPKGA 1332

Query: 564  PTMVPLPPGVQPPLPPGAPP----------------------PPPPPPPGSAGMMYAPPP 601
            PT    PP V PP P G P                       PP   P    G    PP 
Sbjct: 1333 PT----PPAVTPPSPKGTPTLPATTPSSKGGPTTPSSKEGPTPPAATPSHKGGPAMTPPS 1388

Query: 602  PPPPPMDPSNFVTMMGMGVAGMPPFGMPPAP 632
            P   P  PS         V  + P   P  P
Sbjct: 1389 PKRGPAIPSPKGDPTSPAVIPLSPKKAPATP 1419



 Score = 69.3 bits (168), Expect = 1e-11
 Identities = 91/364 (25%), Positives = 118/364 (32%), Gaps = 78/364 (21%)

Query: 323  APVPASVGSTS---GPATTPLASAPRPAA-----PANNP--PPPSLMSTTQSRPPWMNSG 372
            AP PA V   S   GPAT+P   AP P A     P  +P  PPP    T  +  P    G
Sbjct: 1286 APNPAVVTPPSPKGGPATSPPKGAPTPPAATPPSPKGSPGTPPPKGAPTPPAVTPPSPKG 1345

Query: 373  PSESRPYHGMHGGGPGGPGGGPHSFPHPLPSLTGGHGGHPMQH-----------NPNGPP 421
                        GGP  P       P   P+ T  H G P              +P G P
Sbjct: 1346 TPTLPATTPSSKGGPTTPSSKEGPTP---PAATPSHKGGPAMTPPSPKRGPAIPSPKGDP 1402

Query: 422  P--------PWMQPPPPPMNQGPHPP--GHHGPPPMDQY------LGSTPVGSGVYRLHQ 465
                     P   P  P   +G   P  G   PP +           S P G       +
Sbjct: 1403 TSPAVIPLSPKKAPATPVTREGAATPSKGDLTPPAVTPVSLKKAPATSAPKGGPATPSSK 1462

Query: 466  GKGMMPP--PPMGMMPPPP---------------PPPSGQPPPP---PSGPLPPWQQQQQ 505
            G   +P   PP    PP P               P P G P  P   PS P         
Sbjct: 1463 GDPTLPAVTPPSPKEPPAPKQVATSSSPKKAPATPAPMGAPTLPAVIPSSPKEVPATPSS 1522

Query: 506  QPPPPPPPSSSMASSTP---------------LPWQQNTTTTTTSAGTGSIPPWQQQQAA 550
            +  P  P ++ ++  TP               +P  + T    T     + P  ++  + 
Sbjct: 1523 RRDPIAPTATLLSKKTPATLAPKEALIPPAMTVPSPKKTPAIPTPKEAPATPSSKEASSP 1582

Query: 551  AAASPGAPQMQGNPTMVPLPPGVQPPLPPGAPPPPPPPPPGSAGMMYAPPP---PPPPPM 607
             A +P   +   +P  + +PP V  P P  AP PP   PP        P P   P  PP+
Sbjct: 1583 PAVTPSTYKGAPSPKELLIPPAVTSPSPKEAPTPPAVTPPSPEKGPATPAPKGTPTSPPV 1642

Query: 608  DPSN 611
             PS+
Sbjct: 1643 TPSS 1646



 Score = 65.9 bits (159), Expect = 1e-10
 Identities = 87/339 (25%), Positives = 111/339 (32%), Gaps = 50/339 (14%)

Query: 324  PVPASVGSTSGP-ATTPLA-----SAPRPAAPANNPPPPSL----MSTTQSRPPWMNSGP 373
            PV  S  +T  P AT  LA     S P P+ P    PP +     +S T +  P + S P
Sbjct: 709  PVAPSPQNTCAPLATLVLAPEIPKSVPSPSLPPAGTPPGTKKVDGISHTSALAP-VASSP 767

Query: 374  SESRPYHGMHGGGPGGPGGGPHSFPHPLPSLTGGHGGHPMQHNPNGPPPPWMQPPPPPMN 433
             E        G        G  ++    PS  G               P   +PP    +
Sbjct: 768  KECPTEDS--GASATASSKGTLTYLADSPSPLGV-----------SVSPQTKRPPTKKGS 814

Query: 434  QGPHPP-GHHGPPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPMGMMPPPPPPPSGQPPPP 492
             GP  P G+   P         P  S  +   QG       P     P PP P G P P 
Sbjct: 815  AGPDTPIGNLSSPVSPVEASFLPENSLSF---QGS---KDSPATTHSPTPPSPKGAPTPS 868

Query: 493  PSGPLPPWQQQQQQPPPPPPPSSSMASSTPLPWQQNTTTTTTSAGTGSIPPWQQQQAAAA 552
               PL P   +    PP   P+ S+ +  P P +   T     A   S+     ++A A 
Sbjct: 869  AVTPLSP---KGVTLPPKETPTPSVVN-LPFPKEGPATPAPKQAPALSMTSSSPKKARAT 924

Query: 553  ASPGAPQMQGNPTMVPLPPGVQPP---------------LPPGAPPPPPPPPPGSAGMMY 597
             +P       +P   P PP   PP                PP A PP P   P +     
Sbjct: 925  PAPKGIPASPSPKGAPTPPAATPPSPKGGPATPSPKWAPTPPAATPPSPKGGPATPSPKG 984

Query: 598  APPPPPPPPMDPSNFVTMMGMGVAGMPPFGMPPAPPPPP 636
            AP PP   P  P           A  PP   PP+P   P
Sbjct: 985  APTPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSP 1023



 Score = 58.9 bits (141), Expect = 1e-08
 Identities = 78/323 (24%), Positives = 105/323 (32%), Gaps = 19/323 (5%)

Query: 326  PASVGSTSGPATT-----PLASAPRPAAPANNPPPPSLMSTTQSRPPWMNSGPSESRPYH 380
            PA+     GPAT      P   A  P +P   P P  + +++  +       P  +    
Sbjct: 1447 PATSAPKGGPATPSSKGDPTLPAVTPPSPKEPPAPKQVATSSSPKKAPATPAPMGAPTLP 1506

Query: 381  GMHGGGPGGPGGGPHSFPHPL-PSLTGGHGGHPMQHNPNGPP-PPWMQPPPPPMNQGPHP 438
             +    P      P S   P+ P+ T      P    P     PP M  P P        
Sbjct: 1507 AVIPSSPKEVPATPSSRRDPIAPTATLLSKKTPATLAPKEALIPPAMTVPSPKKTPAIPT 1566

Query: 439  PGHHGPPPMDQYLGSTP-VGSGVYRLHQGKGMMPPPPMGMMPPP---PPPPSGQPPPPPS 494
            P      P  +   S P V    Y+       +  PP    P P   P PP+  PP P  
Sbjct: 1567 PKEAPATPSSKEASSPPAVTPSTYKGAPSPKELLIPPAVTSPSPKEAPTPPAVTPPSPEK 1626

Query: 495  GPLPPWQQQQQQPPPPPPPSSSMASSTPLPWQQNTTTTTTSAGTGSIPPWQQQQAAAAAS 554
            GP  P  +     PP  P S   + ++P         T   A  G   P ++   A    
Sbjct: 1627 GPATPAPKGTPTSPPVTPSSLKDSPTSPASVTCKMGATVPQASKGL--PAKKGPTALKEV 1684

Query: 555  PGAPQMQGNPTM-VPLPPGVQPPLPPGAPPPPPPPPP---GSAGMMYAPPPPPPPPMDPS 610
              AP  +  P +  P   G Q        PP  P P    GS G +    P P  P+   
Sbjct: 1685 LVAPAPESTPIITAPTRKGPQTKKSSATSPPICPDPSAKNGSKGPLSTVAPAPLLPVQKD 1744

Query: 611  NFVTMMGMGVAGMPPFGMPPAPP 633
            +  T  G   +  P    P APP
Sbjct: 1745 SSKTAKGKDASHSPK--GPLAPP 1765



 Score = 50.8 bits (120), Expect = 4e-06
 Identities = 76/324 (23%), Positives = 106/324 (32%), Gaps = 36/324 (11%)

Query: 322  EAPV-PASVGSTSGPATTPLASAPRPAAPANNPPPPSLMSTTQSRPPWMNSGPSESRPYH 380
            EAP  P+S  ++S PA TP      P+ P     PP++ S +    P     P    P  
Sbjct: 1569 EAPATPSSKEASSPPAVTPSTYKGAPS-PKELLIPPAVTSPSPKEAPT----PPAVTPPS 1623

Query: 381  GMHGGGPGGPGGGPHSFPHPLPSLTGGHGGHPMQHNPNGPPPPWMQPPPPPMNQGPHPPG 440
               G     P G P S P    SL         + +P  P     +            P 
Sbjct: 1624 PEKGPATPAPKGTPTSPPVTPSSL---------KDSPTSPASVTCKMGATVPQASKGLPA 1674

Query: 441  HHGPPPMDQYL-GSTPVGSGVYRLHQGKGMMPPPPMGMMPPPPPPPS------GQPPPPP 493
              GP  + + L    P  + +      KG          PP  P PS      G      
Sbjct: 1675 KKGPTALKEVLVAPAPESTPIITAPTRKGPQTKKSSATSPPICPDPSAKNGSKGPLSTVA 1734

Query: 494  SGPLPPWQQQQQQPPPPPPPSSSMASSTPLPWQQNTTTTTTSAGTGSIPPWQQQQAAAAA 553
              PL P Q+   +       S S       P  + +T  T +A    +P  +    +AA 
Sbjct: 1735 PAPLLPVQKDSSKTAKGKDASHSPKGPLAPPESKASTPLTAAAFEKVLPKPESASVSAAP 1794

Query: 554  SPGAPQMQGNPTMVPLPPGVQPPLPPGAPPPPPPPPPGSAGMMYAPPPPPPPPMDPSNFV 613
            SP        P  +PL P   P LPP     P  P     G++   P  P  P D    +
Sbjct: 1795 SP--------PVSLPLAPSPVPTLPPKQQFLPSSP-----GLVLESPSKPLAPADEDELL 1841

Query: 614  TMM-GMGVAGMPPFGMPPAPPPPP 636
             ++    ++G  PF       P P
Sbjct: 1842 PLIPPEPISGGVPFQSVLVNMPTP 1865



 Score = 47.8 bits (112), Expect = 3e-05
 Identities = 75/329 (22%), Positives = 106/329 (32%), Gaps = 54/329 (16%)

Query: 326  PASVGSTSGPATTPLASAPRPAAPANNPPPPSLMSTTQSR-------------PPWMNSG 372
            PA +G+ + PA  P +    PA P++   P +  +T  S+             PP M   
Sbjct: 1497 PAPMGAPTLPAVIPSSPKEVPATPSSRRDPIAPTATLLSKKTPATLAPKEALIPPAMTVP 1556

Query: 373  PSESRPYHGMHGGGPGGPGGGPHSFPHPLPSLTGGHGGHPMQ----------HNPNGPPP 422
              +  P        P  P     S P  +   T      P +               P P
Sbjct: 1557 SPKKTPAIPTPKEAPATPSSKEASSPPAVTPSTYKGAPSPKELLIPPAVTSPSPKEAPTP 1616

Query: 423  PWMQPPPPPMNQGPHPPGHHG----PPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPMGMM 478
            P + PP P   +GP  P   G    PP     L  +P          G   +P    G+ 
Sbjct: 1617 PAVTPPSP--EKGPATPAPKGTPTSPPVTPSSLKDSPTSPASVTCKMG-ATVPQASKGLP 1673

Query: 479  PPPPPPPSGQ---PPPPPSGPL--PPWQQQQQ-------QPPPPPPPSSSMASSTPLPWQ 526
                P    +    P P S P+   P ++  Q        PP  P PS+   S  PL   
Sbjct: 1674 AKKGPTALKEVLVAPAPESTPIITAPTRKGPQTKKSSATSPPICPDPSAKNGSKGPL--- 1730

Query: 527  QNTTTTTTSAGTGSIPPWQQQQAAAAASPGAPQMQGNPTMVPLPPGVQPPLPPGAPPPPP 586
                   ++     + P Q+  +  A    A      P + P       PL   A     
Sbjct: 1731 -------STVAPAPLLPVQKDSSKTAKGKDASHSPKGP-LAPPESKASTPLTAAAFEKVL 1782

Query: 587  PPPPGSAGMMYAPPPPPPPPMDPSNFVTM 615
            P P  SA +  AP PP   P+ PS   T+
Sbjct: 1783 PKPE-SASVSAAPSPPVSLPLAPSPVPTL 1810



 Score = 38.5 bits (88), Expect = 0.019
 Identities = 44/146 (30%), Positives = 57/146 (39%), Gaps = 27/146 (18%)

Query: 487 GQPPPPPSGPLPPWQQQ-----QQQPPPPPPPSSSMASSTPLPWQQNTTTTTTSAGTGS- 540
           GQP P    P  P  QQ       Q  P P PS+  ++   +P+ Q+++ T    GT   
Sbjct: 39  GQPGPTLPPPCSPAPQQCPLSAANQASPFPSPSTIASTPLEVPFPQSSSGTALPLGTAPE 98

Query: 541 --------IPPWQQQQAAAAASPG-APQMQGNP-TMVPL------PPGVQ-----PPLPP 579
                   I P     A A ASP  AP ++G P +  PL      P  VQ     PP   
Sbjct: 99  APTFLPNLIGPPISPAALALASPMIAPTLKGTPSSSAPLALVALAPHSVQKSSAFPPNLL 158

Query: 580 GAPPPPPPPPPGSAGMMYAPPPPPPP 605
            +PP       GS   + AP  P  P
Sbjct: 159 TSPPSVAVAESGSVITLSAPIAPSEP 184



 Score = 33.5 bits (75), Expect = 0.62
 Identities = 55/238 (23%), Positives = 81/238 (34%), Gaps = 45/238 (18%)

Query: 324  PVPASVGSTSGPATTPLASAPRPAAPANNPPPPSLMSTTQSRPPWMNSGPSESRPYHGMH 383
            P P++   + GP +T    AP P  P       +      S  P     P ES+    + 
Sbjct: 1718 PDPSAKNGSKGPLSTV---APAPLLPVQKDSSKTAKGKDASHSPKGPLAPPESKASTPLT 1774

Query: 384  GGGPGGPGGGPHSFPHPLPSLTGGHGGHPMQHNPNGPPPPWMQPPPPPMNQGPHPPGHHG 443
                        +F   LP         P   + +  P P   P   P+   P P     
Sbjct: 1775 AA----------AFEKVLPK--------PESASVSAAPSP---PVSLPLAPSPVPT---- 1809

Query: 444  PPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPMGMMPPPPPPPSGQPPPPPSGPLPPWQQQ 503
             PP  Q+L S+P   G+      K + P     ++P  PP P        SG +P    Q
Sbjct: 1810 LPPKQQFLPSSP---GLVLESPSKPLAPADEDELLPLIPPEPI-------SGGVP---FQ 1856

Query: 504  QQQPPPPPPPSSSMASSTPLPWQ----QNTTTTTTSAGTGSIPPWQQQQAAAAASPGA 557
                  P P S+ +   TP   Q     N  + T S    S+P  ++Q +  A +  A
Sbjct: 1857 SVLVNMPTPKSAGIPVPTPSAKQPVTKNNKGSGTESDSDESVPELEEQDSTQATTQQA 1914



 Score = 32.7 bits (73), Expect = 1.1
 Identities = 27/109 (24%), Positives = 38/109 (34%), Gaps = 16/109 (14%)

Query: 543 PWQQQQAAAAASPGAPQMQGNPTMVPLPPGVQPPLPPGAPPPPPPPP--------PGSAG 594
           P +  +   A     PQ Q    ++P+   +      G P P  PPP        P SA 
Sbjct: 2   PGEATETVPATEQELPQPQAETAVLPMSSALSVTAALGQPGPTLPPPCSPAPQQCPLSAA 61

Query: 595 MMYAPPPPPPP--------PMDPSNFVTMMGMGVAGMPPFGMPPAPPPP 635
              +P P P          P   S+  T + +G A   P  +P    PP
Sbjct: 62  NQASPFPSPSTIASTPLEVPFPQSSSGTALPLGTAPEAPTFLPNLIGPP 110


>gi|21361376 splicing factor 3a, subunit 2 [Homo sapiens]
          Length = 464

 Score =  100 bits (250), Expect = 3e-21
 Identities = 103/318 (32%), Positives = 117/318 (36%), Gaps = 98/318 (30%)

Query: 346 PAAPANNP----PPPSLMSTTQSRPPWMNSGPSESRPYHGMHGGGPGGPGGGPHSFPHPL 401
           P+ PA  P    PPP LM+    RPP   S P             P  PGG P     P+
Sbjct: 221 PSLPAGPPGVKRPPPPLMNGLPPRPPLPESLP-------------PPPPGGLPLP---PM 264

Query: 402 PSLTGGHGGHPMQHNPNGPPPPWMQPPPPPMNQGPHPPGHHGPPPMDQYLGSTPVGSGVY 461
           P         P    P+GPP P   PPP P   G HPP     PP     G  P   GV+
Sbjct: 265 P---------PTGPAPSGPPGPPQLPPPAP---GVHPPAPVVHPPAS---GVHPPAPGVH 309

Query: 462 RLHQGKGMMPPPPMGMMPPPP---PPPSGQPPPPPSGPLPPWQQQQQQPPPPPPPSSSMA 518
                     PP  G+ PP P   PP SG  PP P G  PP        P   PP+  + 
Sbjct: 310 ----------PPAPGVHPPAPGVHPPTSGVHPPAP-GVHPPAPGVHPPAPGVHPPAPGVH 358

Query: 519 SSTPLPWQQNTTTTTTSAGTGSIPPWQQQQAAAAASPGAPQMQ-GNPTMVPLPPGVQPPL 577
              P                G  PP      +A   P AP +    P + P  PGV PP 
Sbjct: 359 PPAP----------------GVHPP-----PSAGVHPQAPGVHPAAPAVHPQAPGVHPPA 397

Query: 578 P------PGAPPPPPPPPPGSAGMMYAPPPPPPPPMDPSNFVTMMGMGV---AGMPPFGM 628
           P      PG  P PP   P + G+      P PP + PSN       GV     MPP   
Sbjct: 398 PGMHPQAPGVHPQPPGVHPSAPGV-----HPQPPGVHPSN------PGVHPPTPMPPMLR 446

Query: 629 PPAP-------PPPPPQN 639
           PP P       PPPPP N
Sbjct: 447 PPLPSEGPGNIPPPPPTN 464



 Score = 80.1 bits (196), Expect = 6e-15
 Identities = 71/217 (32%), Positives = 84/217 (38%), Gaps = 38/217 (17%)

Query: 425 MQPPPPPMNQGPHPPGHHGPPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPMG-MMPPPPP 483
           M+ PP P +    PPG   PPP        P+ +G         + P PP+   +PPPPP
Sbjct: 214 MEKPPAPPSLPAGPPGVKRPPP--------PLMNG---------LPPRPPLPESLPPPPP 256

Query: 484 PPSGQPPPPPSGPLPPWQQQQQQPPPPPPPSSSMASSTPLPWQQNTTTTTTSAGTGSIPP 543
                PP PP+GP P       Q PPP P         P P      +       G  PP
Sbjct: 257 GGLPLPPMPPTGPAPSGPPGPPQLPPPAP-----GVHPPAPVVHPPASGVHPPAPGVHPP 311

Query: 544 WQQQQAAAAASPGAPQMQGNPTMV-PLPPGVQPPLPPGAPPPP--PPPPPGSAGMMYAPP 600
                 A    P AP +    + V P  PGV PP P   PP P   PP PG    ++ P 
Sbjct: 312 ------APGVHPPAPGVHPPTSGVHPPAPGVHPPAPGVHPPAPGVHPPAPG----VHPPA 361

Query: 601 PPPPPPMDPSNFVTMMGMGVAGMPPFGMPPAPPPPPP 637
           P   PP  PS  V     GV    P   P AP   PP
Sbjct: 362 PGVHPP--PSAGVHPQAPGVHPAAPAVHPQAPGVHPP 396



 Score = 75.1 bits (183), Expect = 2e-13
 Identities = 66/205 (32%), Positives = 77/205 (37%), Gaps = 36/205 (17%)

Query: 322 EAPVPASVGSTSGPATTPLASAPRPAAPANNPPPPSL--------MSTTQSRPPWMN--- 370
           + P PA       P   P AS   P AP  +PP P +          T+   PP      
Sbjct: 279 QLPPPAPGVHPPAPVVHPPASGVHPPAPGVHPPAPGVHPPAPGVHPPTSGVHPPAPGVHP 338

Query: 371 SGPSESRPYHGMHGGGPGGPGGGPHSFPHPL----PSLTGGHGGHPMQHNPNGPPPPWMQ 426
             P    P  G+H   PG     P   P P     P   G H   P  H    P  P + 
Sbjct: 339 PAPGVHPPAPGVHPPAPGVHPPAPGVHPPPSAGVHPQAPGVHPAAPAVH----PQAPGVH 394

Query: 427 PPPPPMNQGPHPPGHHGPPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPMGMMPPPPPPPS 486
           PP P M+  P  PG H  PP     G  P   GV+   Q  G+ P  P G+ PP P PP 
Sbjct: 395 PPAPGMH--PQAPGVHPQPP-----GVHPSAPGVH--PQPPGVHPSNP-GVHPPTPMPPM 444

Query: 487 GQPPPPPSGPLPPWQQQQQQPPPPP 511
            +PP P  GP          PPPPP
Sbjct: 445 LRPPLPSEGP-------GNIPPPPP 462



 Score = 50.4 bits (119), Expect = 5e-06
 Identities = 29/73 (39%), Positives = 33/73 (45%), Gaps = 15/73 (20%)

Query: 571 PGVQPPLPPGAPPPPPPPPPGSAGMMYAPP-----PPPPPPMDPSNFVTMMGMGVAGMPP 625
           P   P LP G P    PPPP   G+   PP     PPPPP           G+ +  MPP
Sbjct: 217 PPAPPSLPAGPPGVKRPPPPLMNGLPPRPPLPESLPPPPPG----------GLPLPPMPP 266

Query: 626 FGMPPAPPPPPPQ 638
            G  P+ PP PPQ
Sbjct: 267 TGPAPSGPPGPPQ 279



 Score = 49.7 bits (117), Expect = 8e-06
 Identities = 39/126 (30%), Positives = 50/126 (39%), Gaps = 26/126 (20%)

Query: 321 GEAPVPASVGSTSGPATTPLASAPRPAAPANNPPPPSLMSTTQSRPPWMNSGPSESRPYH 380
           G  P P++      P   P A A  P AP  +PP P +      + P ++  P       
Sbjct: 363 GVHPPPSAGVHPQAPGVHPAAPAVHPQAPGVHPPAPGM----HPQAPGVHPQPP------ 412

Query: 381 GMHGGGPGGPGGGPHSFPHPLPSLTGGHGGHPMQHNPNGPPPPWMQPPPPPMNQGPHPPG 440
           G+H   PG          HP P   G H  +P  H P  P PP ++PP P    G  PP 
Sbjct: 413 GVHPSAPG---------VHPQP--PGVHPSNPGVHPPT-PMPPMLRPPLPSEGPGNIPP- 459

Query: 441 HHGPPP 446
              PPP
Sbjct: 460 ---PPP 462


>gi|45827712 quaking homolog, KH domain RNA binding isoform HQK-7B
           [Homo sapiens]
          Length = 319

 Score =  100 bits (248), Expect = 5e-21
 Identities = 64/181 (35%), Positives = 100/181 (55%), Gaps = 21/181 (11%)

Query: 86  IYNSEGKRLNTREFRTRKKLEEERHNLITEMVALNPDFKPPADYKPPATRVSDKVMIPQD 145
           I+N   + L+    R RK +  +  N  TE  +         D   P  ++ +K+ +P  
Sbjct: 37  IFNHLERLLDEEISRVRKDMYNDTLNGSTEKRSAELP-----DAVGPIVQLQEKLYVPVK 91

Query: 146 EYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGKGSVKEGKV-----GRKDGQMLPGED 200
           EYP+ NFVG ++GPRG T K +E E   KIM+RGKGS+++ K      G+ + + L   +
Sbjct: 92  EYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHL---N 148

Query: 201 EPLHALVTANTMEN-----VKKAVEQIRNILKQGIETPEDQNDLRKMQLRELARLNGTLR 255
           E LH L+T    +N     +K+AVE+++ +L   +   E ++ L+KMQL ELA LNGT R
Sbjct: 149 EDLHVLITVEDAQNRAEIKLKRAVEEVKKLL---VPAAEGEDSLKKMQLMELAILNGTYR 205

Query: 256 E 256
           +
Sbjct: 206 D 206


>gi|45827710 quaking homolog, KH domain RNA binding isoform HQK-7
           [Homo sapiens]
          Length = 325

 Score =  100 bits (248), Expect = 5e-21
 Identities = 64/181 (35%), Positives = 100/181 (55%), Gaps = 21/181 (11%)

Query: 86  IYNSEGKRLNTREFRTRKKLEEERHNLITEMVALNPDFKPPADYKPPATRVSDKVMIPQD 145
           I+N   + L+    R RK +  +  N  TE  +         D   P  ++ +K+ +P  
Sbjct: 37  IFNHLERLLDEEISRVRKDMYNDTLNGSTEKRSAELP-----DAVGPIVQLQEKLYVPVK 91

Query: 146 EYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGKGSVKEGKV-----GRKDGQMLPGED 200
           EYP+ NFVG ++GPRG T K +E E   KIM+RGKGS+++ K      G+ + + L   +
Sbjct: 92  EYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHL---N 148

Query: 201 EPLHALVTANTMEN-----VKKAVEQIRNILKQGIETPEDQNDLRKMQLRELARLNGTLR 255
           E LH L+T    +N     +K+AVE+++ +L   +   E ++ L+KMQL ELA LNGT R
Sbjct: 149 EDLHVLITVEDAQNRAEIKLKRAVEEVKKLL---VPAAEGEDSLKKMQLMELAILNGTYR 205

Query: 256 E 256
           +
Sbjct: 206 D 206


>gi|45827708 quaking homolog, KH domain RNA binding isoform HQK-6
           [Homo sapiens]
          Length = 319

 Score =  100 bits (248), Expect = 5e-21
 Identities = 64/181 (35%), Positives = 100/181 (55%), Gaps = 21/181 (11%)

Query: 86  IYNSEGKRLNTREFRTRKKLEEERHNLITEMVALNPDFKPPADYKPPATRVSDKVMIPQD 145
           I+N   + L+    R RK +  +  N  TE  +         D   P  ++ +K+ +P  
Sbjct: 37  IFNHLERLLDEEISRVRKDMYNDTLNGSTEKRSAELP-----DAVGPIVQLQEKLYVPVK 91

Query: 146 EYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGKGSVKEGKV-----GRKDGQMLPGED 200
           EYP+ NFVG ++GPRG T K +E E   KIM+RGKGS+++ K      G+ + + L   +
Sbjct: 92  EYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHL---N 148

Query: 201 EPLHALVTANTMEN-----VKKAVEQIRNILKQGIETPEDQNDLRKMQLRELARLNGTLR 255
           E LH L+T    +N     +K+AVE+++ +L   +   E ++ L+KMQL ELA LNGT R
Sbjct: 149 EDLHVLITVEDAQNRAEIKLKRAVEEVKKLL---VPAAEGEDSLKKMQLMELAILNGTYR 205

Query: 256 E 256
           +
Sbjct: 206 D 206


>gi|45827706 quaking homolog, KH domain RNA binding isoform HQK-5
           [Homo sapiens]
          Length = 341

 Score =  100 bits (248), Expect = 5e-21
 Identities = 64/181 (35%), Positives = 100/181 (55%), Gaps = 21/181 (11%)

Query: 86  IYNSEGKRLNTREFRTRKKLEEERHNLITEMVALNPDFKPPADYKPPATRVSDKVMIPQD 145
           I+N   + L+    R RK +  +  N  TE  +         D   P  ++ +K+ +P  
Sbjct: 37  IFNHLERLLDEEISRVRKDMYNDTLNGSTEKRSAELP-----DAVGPIVQLQEKLYVPVK 91

Query: 146 EYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGKGSVKEGKV-----GRKDGQMLPGED 200
           EYP+ NFVG ++GPRG T K +E E   KIM+RGKGS+++ K      G+ + + L   +
Sbjct: 92  EYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHL---N 148

Query: 201 EPLHALVTANTMEN-----VKKAVEQIRNILKQGIETPEDQNDLRKMQLRELARLNGTLR 255
           E LH L+T    +N     +K+AVE+++ +L   +   E ++ L+KMQL ELA LNGT R
Sbjct: 149 EDLHVLITVEDAQNRAEIKLKRAVEEVKKLL---VPAAEGEDSLKKMQLMELAILNGTYR 205

Query: 256 E 256
           +
Sbjct: 206 D 206


>gi|18959210 WIRE protein [Homo sapiens]
          Length = 440

 Score = 99.8 bits (247), Expect = 7e-21
 Identities = 99/312 (31%), Positives = 120/312 (38%), Gaps = 71/312 (22%)

Query: 341 ASAPRPAAPANNPPPPSLMSTTQSRPPWMNSGPSESRPYHGMHGGGPGGPGGGPHSFPH- 399
           A+APRP   A +  P     ++++  P +   P   RP                 S P  
Sbjct: 120 AAAPRPPVSAASGRPQDDTDSSRASLPEL---PRMQRP-----------------SLPDL 159

Query: 400 PLPSLTGGHGGHPMQHNPNGPPPPWMQPPPPPMNQGPHP-PGHHGPPPMDQYLGSTPVGS 458
             P+ T   G   M+H+ + PPPP   PP    N  P P P H    P        P   
Sbjct: 160 SRPNTTSSTG---MKHSSSAPPPP---PPGRRANAPPTPLPMHSSKAPAYNREKPLPPTP 213

Query: 459 GVYRLHQGKGMMPPPPMGMMPPPPPP------PSGQ---PPPPPSGPLPPWQQQQQQPPP 509
           G  RLH G+   P PP   + PPP P      PSGQ   PPPPP          +Q P  
Sbjct: 214 G-QRLHPGREGPPAPPP--VKPPPSPVNIRTGPSGQSLAPPPPP---------YRQPPGV 261

Query: 510 PPPPSSSMASSTP-LPWQQNTTTTTTSAGTGSIPPWQQQQAAAAASPGAPQMQGNPTMV- 567
           P  PSS    S P LP + N+    T      + P              P    +P+++ 
Sbjct: 262 PNGPSSPTNESAPELPQRHNSLHRKTPGPVRGLAP-------------PPPTSASPSLLS 308

Query: 568 --PLPPGVQPPLPPGAPPPPPPPPPGSAGMMYAPPPPPPPPMDPSNFVTMMGMGVAGMPP 625
             P PP   PP    APPPPPP      G   APPPPPP  M  S        G    PP
Sbjct: 309 NRPPPPARDPPSRGAAPPPPPPVIRN--GARDAPPPPPPYRMHGSE---PPSRGKPPPPP 363

Query: 626 FGMPPAPPPPPP 637
              P  PPPPPP
Sbjct: 364 SRTPAGPPPPPP 375



 Score = 94.7 bits (234), Expect = 2e-19
 Identities = 85/299 (28%), Positives = 109/299 (36%), Gaps = 60/299 (20%)

Query: 298 GDPQSAQDKARMDKEYLSLMAE--LGEAPVPASVGSTSGPATTPLASAPRPAAPANNPPP 355
           G PQ   D +R     L  M    L +   P +  ST    ++     P P   AN PP 
Sbjct: 132 GRPQDDTDSSRASLPELPRMQRPSLPDLSRPNTTSSTGMKHSSSAPPPPPPGRRANAPPT 191

Query: 356 PSLMSTTQSRPPWMNSGPSESRPYHGMHGGGPGGPGGGPHSFPHPLPSLTGGHGGHPMQH 415
           P  M ++++ P +    P    P   +H G  G P   P   P    ++  G  G  +  
Sbjct: 192 PLPMHSSKA-PAYNREKPLPPTPGQRLHPGREGPPAPPPVKPPPSPVNIRTGPSGQSLA- 249

Query: 416 NPNGPPPPWMQPPPPPMNQGPHPPGHHGPPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPM 475
               PPPP+ QPP  P   GP  P +   P + Q   S         LH+     P P  
Sbjct: 250 ---PPPPPYRQPPGVP--NGPSSPTNESAPELPQRHNS---------LHR---KTPGPVR 292

Query: 476 GMMPPPPPPP-----SGQPPPPPSGPLPPWQQQQQQPPPPPPPSSSMASSTPLPWQQNTT 530
           G+ PPPP        S +PPPP   P      +   PPPPPP   + A   P P      
Sbjct: 293 GLAPPPPTSASPSLLSNRPPPPARDP----PSRGAAPPPPPPVIRNGARDAPPP------ 342

Query: 531 TTTTSAGTGSIPPWQQQQAAAAASPGAPQMQGNPTMVPLPPGVQPPLPPGAPPPPPPPP 589
                      PP  +   +   S G P           PP   P   P  PPPPPPPP
Sbjct: 343 -----------PPPYRMHGSEPPSRGKP-----------PP--PPSRTPAGPPPPPPPP 377



 Score = 51.6 bits (122), Expect = 2e-06
 Identities = 71/273 (26%), Positives = 89/273 (32%), Gaps = 75/273 (27%)

Query: 417 PNGPPPPWMQPPPPPMNQGPHPP------------------------------GHHGPPP 446
           P  PPPP   PPPP  +Q                                        P 
Sbjct: 4   PPPPPPPPGPPPPPTFHQANTEQPKLSRDEQRGRGALLQDICKGTKLKKVTNINDRSAPI 63

Query: 447 MDQYLGSTP-VGSGVYRLHQGKGMMPPPPMGMMPPPPPPPSGQPPPPPSGPLPPWQQQQQ 505
           +++  GS+   GSG   L    G+     + + P      S      P+  +P  +    
Sbjct: 64  LEKPKGSSGGYGSGGAALQPKGGLFQGGVLKLRPVGAKDGSENLAGKPALQIPSSRAAAP 123

Query: 506 QPP-------PPPPPSSSMASSTPLPWQQ----------NTTTTTTSAGTGSIPPWQQQQ 548
           +PP       P     SS AS   LP  Q          NTT++T    + S PP     
Sbjct: 124 RPPVSAASGRPQDDTDSSRASLPELPRMQRPSLPDLSRPNTTSSTGMKHSSSAPP----- 178

Query: 549 AAAAASPGAPQMQGN--PTMVPLPPGVQPPLPPGAPPPPPPPP---PGSAGMMYAPPPPP 603
                 P  P  + N  PT +P+     P      P PP P     PG  G   APPP  
Sbjct: 179 ------PPPPGRRANAPPTPLPMHSSKAPAYNREKPLPPTPGQRLHPGREGPP-APPPVK 231

Query: 604 PPPMDPSNFVTMMGMGVAGMPPFGMPPAPPPPP 636
           PPP  P N  T          P G   APPPPP
Sbjct: 232 PPP-SPVNIRT---------GPSGQSLAPPPPP 254



 Score = 40.0 bits (92), Expect = 0.007
 Identities = 57/237 (24%), Positives = 72/237 (30%), Gaps = 82/237 (34%)

Query: 478 MPPPPPPPSGQPPPPPSGPLPPWQQQQQQPPPPPPPS-------SSMASSTPLPWQQNTT 530
           +PPPPPPP G PPPP        Q   +QP                +   T L    N  
Sbjct: 3   IPPPPPPPPGPPPPPTF-----HQANTEQPKLSRDEQRGRGALLQDICKGTKLKKVTNIN 57

Query: 531 TTT---------TSAGTGSIPPWQQQQAA-----------AAASPGAPQMQGNPTM---- 566
             +         +S G GS     Q +               A  G+  + G P +    
Sbjct: 58  DRSAPILEKPKGSSGGYGSGGAALQPKGGLFQGGVLKLRPVGAKDGSENLAGKPALQIPS 117

Query: 567 ----VPLPP----------------GVQPPLP----PGAPPPPPPPPPGSAGMMY--APP 600
                P PP                   P LP    P  P    P    S GM +  + P
Sbjct: 118 SRAAAPRPPVSAASGRPQDDTDSSRASLPELPRMQRPSLPDLSRPNTTSSTGMKHSSSAP 177

Query: 601 PPPPPPMDPSNFVTMMGMGVAGMPPFGM------------------PPAPPP--PPP 637
           PPPPP    +   T + M  +  P +                    PPAPPP  PPP
Sbjct: 178 PPPPPGRRANAPPTPLPMHSSKAPAYNREKPLPPTPGQRLHPGREGPPAPPPVKPPP 234



 Score = 35.8 bits (81), Expect = 0.12
 Identities = 32/111 (28%), Positives = 38/111 (34%), Gaps = 23/111 (20%)

Query: 330 GSTSGPATTPLASAPRPAAPANNPPPPSLMSTTQSRPPWMNSGPSESRPYHGMHGGGPGG 389
           G   G A  P  SA  P+  +N PPPP+        PP   + P    P   +  G    
Sbjct: 289 GPVRGLAPPPPTSAS-PSLLSNRPPPPA------RDPPSRGAAPPPPPPV--IRNGARDA 339

Query: 390 PGGGPHSFPHPLPSLTGGHGGHPMQHNPNGPPPPWM-----QPPPPPMNQG 435
           P         P P     HG  P       PPP         PPPPP+  G
Sbjct: 340 P---------PPPPPYRMHGSEPPSRGKPPPPPSRTPAGPPPPPPPPLRNG 381



 Score = 33.1 bits (74), Expect = 0.81
 Identities = 11/15 (73%), Positives = 12/15 (80%)

Query: 576 PLPPGAPPPPPPPPP 590
           P+PP  PPPP PPPP
Sbjct: 2   PIPPPPPPPPGPPPP 16



 Score = 30.8 bits (68), Expect = 4.0
 Identities = 12/19 (63%), Positives = 14/19 (73%), Gaps = 2/19 (10%)

Query: 567 VPLPPGVQPPLPPGAPPPP 585
           +P+PP   PP PPG PPPP
Sbjct: 1   MPIPP--PPPPPPGPPPPP 17


>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
           sapiens]
          Length = 855

 Score = 99.0 bits (245), Expect = 1e-20
 Identities = 91/338 (26%), Positives = 119/338 (35%), Gaps = 42/338 (12%)

Query: 333 SGPATTPLASAP----RPAAPANNPPPPSLMSTTQSRP-------PWMNSGPSESRPYHG 381
           + PA  PL+S+P     P+A   +  PP+L +T  S         P   + PS S P   
Sbjct: 292 AAPALGPLSSSPLATPSPSAALQSQAPPTLPATPHSSSLTCQLATPLPLAPPSPSAPPSL 351

Query: 382 MHGGGPGGPGGGPHSFPHPLPSLTGGHGGHPMQH-NPNGPPPPWMQPPP----PPMNQGP 436
                P        +     P+L   H   P    +P   PPP  Q PP    PP+   P
Sbjct: 352 QTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPP--QAPPALALPPLQAPP 409

Query: 437 HPPGHHGPPPMDQYLGSTPVGSGVYRLHQGKGMMPPPP----MGMMPPPPPPPSGQPPPP 492
            PP     PP+      +P       +H  +    PPP         PP  PP      P
Sbjct: 410 SPPAS---PPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATP 466

Query: 493 PSGPLPPWQQQQQQPPPPPPPSSSMASSTPLPWQQNTTTTTTSAGTGSIPPWQQQQAAAA 552
           PS   P       Q PP PP S  M+ S   P Q               PP      A  
Sbjct: 467 PSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALATP 526

Query: 553 ASPGAPQMQGN-PTMVPLPPGVQPPLPPGAPPPPPPPPPGSAGMMYAPPPPP-------- 603
                P    + P   P  P    P+ P A PPP  PP  +A ++  PP PP        
Sbjct: 527 PLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAP 586

Query: 604 --PPPMDPSNFVTMMGMGVAGMPPFGMPPAPPPPPPQN 639
             PP   P   V+   + +A      + P PPPPP ++
Sbjct: 587 RRPPTPGPDTSVSGPRLTLA------LAPGPPPPPSRS 618



 Score = 97.4 bits (241), Expect = 3e-20
 Identities = 99/347 (28%), Positives = 122/347 (35%), Gaps = 53/347 (15%)

Query: 322 EAPVPASVGSTSGPATTPLASAPR----PAAPANNPPPPSLMSTTQSRPPWMNSGPSESR 377
           + P   S+ S++ P ++P  S P     P APA+ P  P        RPP +     ++ 
Sbjct: 235 QRPASRSLSSSATPLSSPARSGPSARGTPRAPAH-PSQPKPKGLQALRPPQVTPPRKDAA 293

Query: 378 PYHGMHGGGP---GGPGGGPHSFPHPLPSLTGGHGGHPMQHNPNGPPPPWMQPPPPPMNQ 434
           P  G     P     P     S   P    T        Q     P  P     PP +  
Sbjct: 294 PALGPLSSSPLATPSPSAALQSQAPPTLPATPHSSSLTCQLATPLPLAPPSPSAPPSLQT 353

Query: 435 GPHPPGHHGPPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPMGMMPPPPPPPSGQPPPPPS 494
            P PP     PP      +T +GS    L      +P PP+  +  PPP        PP+
Sbjct: 354 LPSPPA---TPPSQ---ATTSLGSPT--LQATHSFLPSPPLSPLATPPPQA------PPA 399

Query: 495 GPLPPWQQQQQQPPPPP--PPSSSMASSTPLPWQQNTTTTTTSAGTGSIPPWQQQQA--- 549
             LPP Q     PP PP  PP S +A  TP P   N           S PP    QA   
Sbjct: 400 LALPPLQA----PPSPPASPPLSPLA--TPSPQAPNALAVHLLQAPFSPPPSPPVQAPFS 453

Query: 550 ----------AAAASPGAPQMQGNPTMVPLPPGVQPPLPPGAPPPPPPPPPGSA-GMMYA 598
                     A   S   P +   P  VP  P   PP+ P A PPP  PPP +A  +  A
Sbjct: 454 PPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLA 513

Query: 599 PPPPPPPP---MDPSNFVTMMGMGVAGMPPFG------MPPAPPPPP 636
            PPP  PP     P   +        G  PF       M P   PPP
Sbjct: 514 KPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPP 560



 Score = 73.9 bits (180), Expect = 4e-13
 Identities = 89/314 (28%), Positives = 110/314 (35%), Gaps = 60/314 (19%)

Query: 325 VPASVGSTSGPATTPLASAPRPAAPANNPPPPSLMSTTQSRPPWMNSGPSESRPYHGMHG 384
           +P      S PA+ PL+    P+  A N     L+    S PP     P    P+     
Sbjct: 402 LPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPP----SPPVQAPF----- 452

Query: 385 GGPGGPGGGPHSFP--HPLPSLTGGHGGHPMQHNPNGPPPPWMQPPPPPMNQGPHP---- 438
             P  P   P + P     PSL       P+Q  P+ P  P M P   P  Q P P    
Sbjct: 453 SPPASPPVSPSATPPSQAPPSLAAP----PLQVPPSPPASPPMSPSATPPPQAPPPLAAP 508

Query: 439 ------PGHHGPP----PMDQYLGSTPVGSGVYRLHQGKGMMPPPPMGMMPPPPPPPSGQ 488
                 P    PP    P  Q L S P              +P  P+   PP  PP    
Sbjct: 509 PLQLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAA 568

Query: 489 P--PPPPSGPLPPWQQQQQQPP--------------------PPPPPSSSMAS--STPLP 524
           P    PPS P  P  Q  ++PP                    PPPPPS S +S  S P  
Sbjct: 569 PLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDL 628

Query: 525 WQQNTTTTTTSAGTGSIPPWQQQQAAAAASPGAPQMQGNPTMVPLPPGVQPPL----PPG 580
              +++ T+T           +  AAA+  P A     +P      P   PPL     PG
Sbjct: 629 AGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAACHPAAWSRGPA--PPLAFRGAPG 686

Query: 581 APPP-PPPPPPGSA 593
           AP P PP   PGSA
Sbjct: 687 APLPWPPATGPGSA 700



 Score = 59.7 bits (143), Expect = 8e-09
 Identities = 84/342 (24%), Positives = 106/342 (30%), Gaps = 102/342 (29%)

Query: 294 FQRPGDPQSAQDKARMDKEYLSLMAELGEAPVPASVGSTSGPATTPLASAPRPAAPANNP 353
           F  P  P  +       +   SL A   + P          P+ TP   AP P A     
Sbjct: 452 FSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLA----A 507

Query: 354 PPPSLMSTTQSRPPWMNSGPSESRPYHGMHGGGPGGPGGGPHSFPHPLP-SLTGGHGGHP 412
           PP  L       PP + + P ++ P               P SFP   P S +      P
Sbjct: 508 PPLQLAKPPPQAPPALATPPLQALP-------------SPPASFPGQAPFSPSASLPMSP 554

Query: 413 MQHNPNGPPP----PWMQ-PPPPPMN---QGPHPPGHHGPPPMDQYLGSTPVGSGVYRLH 464
           +   P   PP    P +Q PP PP +   Q P  P   GP         T V        
Sbjct: 555 LATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGP--------DTSVSG------ 600

Query: 465 QGKGMMPPPPMGMMPPPPPPPSGQPPPPPSGPLPPWQQQQQQPPP--------------- 509
                 P   + + P PPPPPS  P    SGP            P               
Sbjct: 601 ------PRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAA 654

Query: 510 -PPPPSSSMASSTPLPWQQNTTTTTTSAGTGSIPPWQQQQAAAAASPGAPQMQGNPTMVP 568
             PPP + +A+  P  W +           G  PP      A   +PGAP        +P
Sbjct: 655 ASPPPDAELAACHPAAWSR-----------GPAPP-----LAFRGAPGAP--------LP 690

Query: 569 LPPGVQPPL------------PPGAPPPP----PPPPPGSAG 594
            PP   P              P  A P P    P P PG++G
Sbjct: 691 WPPATGPGSADGLCTIYETEGPESATPAPGALDPGPSPGTSG 732



 Score = 59.3 bits (142), Expect = 1e-08
 Identities = 86/360 (23%), Positives = 118/360 (32%), Gaps = 73/360 (20%)

Query: 336 ATTPLASAP---RPAAPANNPPPPSLMSTTQSRPPWMNSGPSESRPYHGMHGGGPGGPGG 392
           A TP A AP    P  P +  PPP +   T +    + +  +  R       GG GG   
Sbjct: 14  ARTPAARAPGLLTPRPPGSPRPPPPV---TPAALRVLGAAGAVGRKPLAERAGGIGG-AT 69

Query: 393 GPHSFPHPLPSLTGGHGGHPMQHNPNGPPPPWM--QPPPPPMNQGPHP---PGHHGPPPM 447
            P S P   P+ + G        NP   PP     +  PP  N  P P   PG       
Sbjct: 70  IPESAPRAGPTRSAGTSSR----NPASRPPASGRGERAPPAKNTSPGPVSSPGRASGTTR 125

Query: 448 DQYLGSTPVG-SGVYRLHQGKGMMPP---------------PPMGMMPP----------- 480
              LG   +  S    + +GK    P               P  G   P           
Sbjct: 126 PGPLGQKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGT 185

Query: 481 ----PPPPPSGQPPPPPSGPLPPWQQQQQQPPPPPPPSSSMASSTPLPWQQNTTTTTTSA 536
               P P PS +P PP  GP        +     P P++    S     Q+  + + +S+
Sbjct: 186 EVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSS 245

Query: 537 GTGSIPPWQQQQAAAAASPGAPQMQGNPTMVPLPPGVQPPLPPGAPPP------------ 584
            T    P      +  ++ G P+   +P+  P P G+Q   PP   PP            
Sbjct: 246 AT----PLSSPARSGPSARGTPRAPAHPSQ-PKPKGLQALRPPQVTPPRKDAAPALGPLS 300

Query: 585 --PPPPPPGSAGMMYAPPPPPPPPMDPSNFVTMMGMGVAGMPPFGMPPAPP-----PPPP 637
             P   P  SA +    PP  P     S+    +   +   PP   P APP     P PP
Sbjct: 301 SSPLATPSPSAALQSQAPPTLPATPHSSSLTCQLATPLPLAPP--SPSAPPSLQTLPSPP 358



 Score = 34.3 bits (77), Expect = 0.36
 Identities = 27/92 (29%), Positives = 34/92 (36%), Gaps = 28/92 (30%)

Query: 571 PGVQPPLPPGAPPPPPPPPP------GSAGMMYAPP-------------PPPPPPMDPSN 611
           PG+  P PPG+P PPPP  P      G+AG +   P             P   P   P+ 
Sbjct: 22  PGLLTPRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATIPESAPRAGPTR 81

Query: 612 FVTMMGMGVAGMPPFGMPPA----PPPPPPQN 639
                  G +   P   PPA       PP +N
Sbjct: 82  -----SAGTSSRNPASRPPASGRGERAPPAKN 108


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.311    0.134    0.428 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,350,075
Number of Sequences: 37866
Number of extensions: 4410795
Number of successful extensions: 147536
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1522
Number of HSP's successfully gapped in prelim test: 2065
Number of HSP's that attempted gapping in prelim test: 24644
Number of HSP's gapped (non-prelim): 40499
length of query: 639
length of database: 18,247,518
effective HSP length: 109
effective length of query: 530
effective length of database: 14,120,124
effective search space: 7483665720
effective search space used: 7483665720
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 65 (29.6 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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