Search of human proteins with 41349491

Search of human proteins with 41349491

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|41349491 protein phosphatase 2, regulatory subunit B'', beta
isoform 2 [Homo sapiens]
         (176 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|33695078 protein phosphatase 2, regulatory subunit B'', beta ...   363   e-101
gi|41349491 protein phosphatase 2, regulatory subunit B'', beta ...   363   e-101
gi|32967586 protein phosphatase 2, regulatory subunit B'', alpha...   191   4e-49
gi|19923229 protein phosphatase 2, regulatory subunit B'', alpha...   191   4e-49
gi|31542242 serine/threonine-protein phosphatase 2A regulatory s...    45   4e-05
gi|32528297 ribosomal protein S6 kinase, polypeptide 5 isoform b...    34   0.057
gi|32528295 ribosomal protein S6 kinase, polypeptide 5 isoform a...    34   0.057
gi|87240000 5,10-methylenetetrahydrofolate reductase [Homo sapiens]    31   0.49 
gi|183396804 Regulation of nuclear pre-mRNA domain containing 2 ...    30   1.1  
gi|239751284 PREDICTED: hypothetical protein XP_002347797 [Homo ...    29   1.8  
gi|146229340 mutated in colorectal cancers isoform 1 [Homo sapiens]    29   1.8  
gi|93352554 GPR158-like 1 [Homo sapiens]                               29   1.8  
gi|153946409 calbindin 2 isoform 1 [Homo sapiens]                      28   3.1  
gi|6031162 calbindin 2 isoform 22k [Homo sapiens]                      28   3.1  
gi|74229011 2',5'-oligoadenylate synthetase 1 isoform 2 [Homo sa...    28   3.1  
gi|134276943 separase [Homo sapiens]                                   28   3.1  
gi|187937179 apoptosis-associated tyrosine kinase [Homo sapiens]       28   3.1  
gi|139394646 iroquois homeobox protein 5 [Homo sapiens]                28   3.1  
gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens]     28   4.1  
gi|19923599 calmin [Homo sapiens]                                      28   4.1  
gi|120432044 vav 3 guanine nucleotide exchange factor isoform 1 ...    28   5.4  
gi|169216384 PREDICTED: similar to hCG1805148 [Homo sapiens]           27   7.0  
gi|169216638 PREDICTED: similar to hCG1805148 [Homo sapiens]           27   7.0  
gi|155030232 proline, glutamic acid and leucine rich protein 1 [...    27   7.0  
gi|20270349 MIT, microtubule interacting and transport, domain c...    27   7.0  
gi|117968621 MACRO domain containing 2 isoform 1 [Homo sapiens]        27   9.2  
gi|74325776 MACRO domain containing 2 isoform 2 [Homo sapiens]         27   9.2  
gi|145553976 zinc finger, CW type with coiled-coil domain 2 isof...    27   9.2  
gi|145553971 zinc finger, CW type with coiled-coil domain 2 isof...    27   9.2  

>gi|33695078 protein phosphatase 2, regulatory subunit B'', beta
           isoform 1 [Homo sapiens]
          Length = 575

 Score =  363 bits (931), Expect = e-101
 Identities = 176/176 (100%), Positives = 176/176 (100%)

Query: 1   MDLDGDGALSMFELEYFYEEQCRRLDSMAIEALPFQDCLCQMLDLVKPRTEGKITLQDLK 60
           MDLDGDGALSMFELEYFYEEQCRRLDSMAIEALPFQDCLCQMLDLVKPRTEGKITLQDLK
Sbjct: 400 MDLDGDGALSMFELEYFYEEQCRRLDSMAIEALPFQDCLCQMLDLVKPRTEGKITLQDLK 459

Query: 61  RCKLANVFFDTFFNIEKYLDHEQKEQISLLRDGDSGGPELSDWEKYAAEEYDILVAEETA 120
           RCKLANVFFDTFFNIEKYLDHEQKEQISLLRDGDSGGPELSDWEKYAAEEYDILVAEETA
Sbjct: 460 RCKLANVFFDTFFNIEKYLDHEQKEQISLLRDGDSGGPELSDWEKYAAEEYDILVAEETA 519

Query: 121 GEPWEDGFEAELSPVEQKLSALRSPLAQRPFFEAPSPLGAVDLYEYACGDEDLEPL 176
           GEPWEDGFEAELSPVEQKLSALRSPLAQRPFFEAPSPLGAVDLYEYACGDEDLEPL
Sbjct: 520 GEPWEDGFEAELSPVEQKLSALRSPLAQRPFFEAPSPLGAVDLYEYACGDEDLEPL 575


>gi|41349491 protein phosphatase 2, regulatory subunit B'', beta
           isoform 2 [Homo sapiens]
          Length = 176

 Score =  363 bits (931), Expect = e-101
 Identities = 176/176 (100%), Positives = 176/176 (100%)

Query: 1   MDLDGDGALSMFELEYFYEEQCRRLDSMAIEALPFQDCLCQMLDLVKPRTEGKITLQDLK 60
           MDLDGDGALSMFELEYFYEEQCRRLDSMAIEALPFQDCLCQMLDLVKPRTEGKITLQDLK
Sbjct: 1   MDLDGDGALSMFELEYFYEEQCRRLDSMAIEALPFQDCLCQMLDLVKPRTEGKITLQDLK 60

Query: 61  RCKLANVFFDTFFNIEKYLDHEQKEQISLLRDGDSGGPELSDWEKYAAEEYDILVAEETA 120
           RCKLANVFFDTFFNIEKYLDHEQKEQISLLRDGDSGGPELSDWEKYAAEEYDILVAEETA
Sbjct: 61  RCKLANVFFDTFFNIEKYLDHEQKEQISLLRDGDSGGPELSDWEKYAAEEYDILVAEETA 120

Query: 121 GEPWEDGFEAELSPVEQKLSALRSPLAQRPFFEAPSPLGAVDLYEYACGDEDLEPL 176
           GEPWEDGFEAELSPVEQKLSALRSPLAQRPFFEAPSPLGAVDLYEYACGDEDLEPL
Sbjct: 121 GEPWEDGFEAELSPVEQKLSALRSPLAQRPFFEAPSPLGAVDLYEYACGDEDLEPL 176


>gi|32967586 protein phosphatase 2, regulatory subunit B'', alpha
           isoform 2 [Homo sapiens]
          Length = 529

 Score =  191 bits (484), Expect = 4e-49
 Identities = 83/129 (64%), Positives = 111/129 (86%)

Query: 1   MDLDGDGALSMFELEYFYEEQCRRLDSMAIEALPFQDCLCQMLDLVKPRTEGKITLQDLK 60
           MD+DGDG LSM+ELEYFYEEQC R+++M IE LPF D LCQMLDLVKP  +GKITL+DLK
Sbjct: 363 MDVDGDGVLSMYELEYFYEEQCERMEAMGIEPLPFHDLLCQMLDLVKPAVDGKITLRDLK 422

Query: 61  RCKLANVFFDTFFNIEKYLDHEQKEQISLLRDGDSGGPELSDWEKYAAEEYDILVAEETA 120
           RC++A++F+DTFFN+EKYLDHEQ++  ++ +D ++ GPE SDW+++AAEEY+ LVAEE+A
Sbjct: 423 RCRMAHIFYDTFFNLEKYLDHEQRDPFAVQKDVENDGPEPSDWDRFAAEEYETLVAEESA 482

Query: 121 GEPWEDGFE 129
              +++GFE
Sbjct: 483 QAQFQEGFE 491


>gi|19923229 protein phosphatase 2, regulatory subunit B'', alpha
            isoform 1 [Homo sapiens]
          Length = 1150

 Score =  191 bits (484), Expect = 4e-49
 Identities = 83/129 (64%), Positives = 111/129 (86%)

Query: 1    MDLDGDGALSMFELEYFYEEQCRRLDSMAIEALPFQDCLCQMLDLVKPRTEGKITLQDLK 60
            MD+DGDG LSM+ELEYFYEEQC R+++M IE LPF D LCQMLDLVKP  +GKITL+DLK
Sbjct: 984  MDVDGDGVLSMYELEYFYEEQCERMEAMGIEPLPFHDLLCQMLDLVKPAVDGKITLRDLK 1043

Query: 61   RCKLANVFFDTFFNIEKYLDHEQKEQISLLRDGDSGGPELSDWEKYAAEEYDILVAEETA 120
            RC++A++F+DTFFN+EKYLDHEQ++  ++ +D ++ GPE SDW+++AAEEY+ LVAEE+A
Sbjct: 1044 RCRMAHIFYDTFFNLEKYLDHEQRDPFAVQKDVENDGPEPSDWDRFAAEEYETLVAEESA 1103

Query: 121  GEPWEDGFE 129
               +++GFE
Sbjct: 1104 QAQFQEGFE 1112


>gi|31542242 serine/threonine-protein phosphatase 2A regulatory
           subunit B'' gamma subunit [Homo sapiens]
          Length = 453

 Score = 44.7 bits (104), Expect = 4e-05
 Identities = 25/102 (24%), Positives = 49/102 (48%), Gaps = 2/102 (1%)

Query: 1   MDLDGDGALSMFELEYFYEEQCRRLDSMAIEALPFQDCLCQMLDLVKPRTEGKITLQDLK 60
           +D++  G L++F L YF+      +     + + FQD   ++ D+VKP+   KI+LQDL 
Sbjct: 353 LDIENKGYLNVFSLNYFFRAIQELMKIHGQDPVSFQDVKDEIFDMVKPKDPLKISLQDLI 412

Query: 61  RCKLANVFFDTFFNIEKYLDHEQKEQISLLRDGDSGGPELSD 102
                +       ++  +  +E +E  +L+ +      +L D
Sbjct: 413 NSNQGDTVTTILIDLNGFWTYENRE--ALVANDSENSADLDD 452


>gi|32528297 ribosomal protein S6 kinase, polypeptide 5 isoform b
           [Homo sapiens]
          Length = 549

 Score = 34.3 bits (77), Expect = 0.057
 Identities = 25/96 (26%), Positives = 37/96 (38%), Gaps = 15/96 (15%)

Query: 89  LLRDGDSGGPELSDWEKYAAEEYDILVAEETAGEPWEDGFEAELS--------PVEQKLS 140
           ++R GDSG  +  DW       Y++L          E   +AE+S        P  Q++S
Sbjct: 224 IVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMS 283

Query: 141 ALRSPLAQRPFFEAPSPLGAVDLYEYACGDEDLEPL 176
           AL   L QR   + P            CG  D + +
Sbjct: 284 ALAKDLIQRLLMKDPKK-------RLGCGPRDADEI 312


>gi|32528295 ribosomal protein S6 kinase, polypeptide 5 isoform a
           [Homo sapiens]
          Length = 802

 Score = 34.3 bits (77), Expect = 0.057
 Identities = 25/96 (26%), Positives = 37/96 (38%), Gaps = 15/96 (15%)

Query: 89  LLRDGDSGGPELSDWEKYAAEEYDILVAEETAGEPWEDGFEAELS--------PVEQKLS 140
           ++R GDSG  +  DW       Y++L          E   +AE+S        P  Q++S
Sbjct: 224 IVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMS 283

Query: 141 ALRSPLAQRPFFEAPSPLGAVDLYEYACGDEDLEPL 176
           AL   L QR   + P            CG  D + +
Sbjct: 284 ALAKDLIQRLLMKDPKK-------RLGCGPRDADEI 312


>gi|87240000 5,10-methylenetetrahydrofolate reductase [Homo sapiens]
          Length = 656

 Score = 31.2 bits (69), Expect = 0.49
 Identities = 17/44 (38%), Positives = 25/44 (56%)

Query: 111 YDILVAEETAGEPWEDGFEAELSPVEQKLSALRSPLAQRPFFEA 154
           +DI VA    G P    FEA+L  +++K+SA    +  + FFEA
Sbjct: 190 FDICVAGYPKGHPEAGSFEADLKHLKEKVSAGADFIITQLFFEA 233


>gi|183396804 Regulation of nuclear pre-mRNA domain containing 2
           [Homo sapiens]
          Length = 1461

 Score = 30.0 bits (66), Expect = 1.1
 Identities = 33/160 (20%), Positives = 64/160 (40%), Gaps = 29/160 (18%)

Query: 23  RRLDSMAIEALPFQDCLCQMLDLVKPRTEGKITLQDLKRCKLANVFFDTFFNIEKYLDHE 82
           ++L +M ++      C  + L  +K +T GK         K +  F +    +E++++  
Sbjct: 212 KQLSTMRVDV-----CSTETLKCLKDKTGGK---------KFSKEFEEASSKLEEFVNGL 257

Query: 83  QKEQISLLRDGDSGGPELSDWEKYAAEEYDILVAEETAGEPWEDGFEAELSPVEQKLSAL 142
            K+           GP L++  + A   Y+    E          F   ++ +++KL  L
Sbjct: 258 DKQV--------KNGPSLTEALENAGIFYEAQYKEVKVVANAYKTFANRVNNLKKKLDQL 309

Query: 143 RSPLAQ-------RPFFEAPSPLGAVDLYEYACGDEDLEP 175
           +S L          P  +APSP G+   ++   G+E   P
Sbjct: 310 KSTLPDPEESPVPSPSMDAPSPTGSESPFQGMGGEESQSP 349


>gi|239751284 PREDICTED: hypothetical protein XP_002347797 [Homo
            sapiens]
          Length = 1674

 Score = 29.3 bits (64), Expect = 1.8
 Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 2/69 (2%)

Query: 95   SGGPELSDWEKYA-AEEYDILVAEETAGEPWEDG-FEAELSPVEQKLSALRSPLAQRPFF 152
            +G  E+  WE  A A E   L AE     P + G   A+L P E+ ++A   P    P +
Sbjct: 1006 AGKAEICPWEVGAGAGEERALGAEAIRKSPNDTGKVSADLGPRERAVTAPEKPQKPTPEW 1065

Query: 153  EAPSPLGAV 161
            E   P G+V
Sbjct: 1066 EVACPWGSV 1074


>gi|146229340 mutated in colorectal cancers isoform 1 [Homo sapiens]
          Length = 1019

 Score = 29.3 bits (64), Expect = 1.8
 Identities = 40/158 (25%), Positives = 63/158 (39%), Gaps = 46/158 (29%)

Query: 2   DLDGDGALSMFELEYFYEEQCRRLDSMAIEALPFQDCLCQMLDLVKPRTEGKITLQDLKR 61
           D DGDG +S  +L       CR+L+         ++ + ++++ +     GKI+ QD  R
Sbjct: 48  DGDGDGYISRNDLLMV----CRQLN--------MEESVAEIMNQLGADENGKISFQDFTR 95

Query: 62  CKLANVFFDTFFNIEKYLDHEQKEQISL-----------LRDGDSGGPELSDWEKYAAEE 110
           C++            + +   +KE++ L           LRD  +  P  SD        
Sbjct: 96  CRM------------QLVREIRKEEVDLSAKSDNSCTKKLRDRIASWPTSSD-------- 135

Query: 111 YDILVAEETAGEPWE--DGFEAELSPVEQKLSALRSPL 146
            + L A   A E WE   G     SP  Q  SAL+  L
Sbjct: 136 -NSLGALSAARESWEYDSGARDLQSPDVQSQSALQKLL 172


>gi|93352554 GPR158-like 1 [Homo sapiens]
          Length = 2367

 Score = 29.3 bits (64), Expect = 1.8
 Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 2/69 (2%)

Query: 95   SGGPELSDWEKYA-AEEYDILVAEETAGEPWEDG-FEAELSPVEQKLSALRSPLAQRPFF 152
            +G  E+  WE  A A E   L AE     P + G   A+L P E+ ++A   P    P +
Sbjct: 1699 AGKAEICPWEVGAGAGEERALGAEAIRKSPNDTGKVSADLGPRERAVTAPEKPQKPTPEW 1758

Query: 153  EAPSPLGAV 161
            E   P G+V
Sbjct: 1759 EVACPWGSV 1767


>gi|153946409 calbindin 2 isoform 1 [Homo sapiens]
          Length = 271

 Score = 28.5 bits (62), Expect = 3.1
 Identities = 25/122 (20%), Positives = 48/122 (39%), Gaps = 18/122 (14%)

Query: 2   DLDGDGALSMFELEYFYE--EQCRRLDSMAIEALPFQDCLCQMLDLVKPRTEGKITLQDL 59
           D DG+G +   ELE F++  E+ R+   M  ++  F + + + +      ++GKI + +L
Sbjct: 29  DADGNGYIEGKELENFFQELEKARKGSGMMSKSDNFGEKMKEFMQKYDKNSDGKIEMAEL 88

Query: 60  KRCKLANVFFDTFFNIEKYLDHEQKEQISLLRDGDSGGPELSDWEKYAAEEYDILVAEET 119
                            + L  E+   +   +   S    +  W KY  +    + A E 
Sbjct: 89  ----------------AQILPTEENFLLCFRQHVGSSAEFMEAWRKYDTDRSGYIEANEL 132

Query: 120 AG 121
            G
Sbjct: 133 KG 134


>gi|6031162 calbindin 2 isoform 22k [Homo sapiens]
          Length = 192

 Score = 28.5 bits (62), Expect = 3.1
 Identities = 25/122 (20%), Positives = 48/122 (39%), Gaps = 18/122 (14%)

Query: 2   DLDGDGALSMFELEYFYE--EQCRRLDSMAIEALPFQDCLCQMLDLVKPRTEGKITLQDL 59
           D DG+G +   ELE F++  E+ R+   M  ++  F + + + +      ++GKI + +L
Sbjct: 29  DADGNGYIEGKELENFFQELEKARKGSGMMSKSDNFGEKMKEFMQKYDKNSDGKIEMAEL 88

Query: 60  KRCKLANVFFDTFFNIEKYLDHEQKEQISLLRDGDSGGPELSDWEKYAAEEYDILVAEET 119
                            + L  E+   +   +   S    +  W KY  +    + A E 
Sbjct: 89  ----------------AQILPTEENFLLCFRQHVGSSAEFMEAWRKYDTDRSGYIEANEL 132

Query: 120 AG 121
            G
Sbjct: 133 KG 134


>gi|74229011 2',5'-oligoadenylate synthetase 1 isoform 2 [Homo
           sapiens]
          Length = 364

 Score = 28.5 bits (62), Expect = 3.1
 Identities = 24/86 (27%), Positives = 36/86 (41%), Gaps = 13/86 (15%)

Query: 75  IEKYLDHEQKEQISLLRD-----GDSGGPELSDWEKYAAEEYDILVAEETAGEPWEDGFE 129
           IEKYL  +  +   ++ D     G+ GG +   W + A E      AE     P    ++
Sbjct: 283 IEKYLRRQLTKPRPVILDPADPTGNLGGGDPKGWRQLAQE------AEAWLNYPCFKNWD 336

Query: 130 AELSPVEQKLSALRSPLAQRPFFEAP 155
              SPV   +  +R P +  PF  AP
Sbjct: 337 G--SPVSSWILLVRPPASSLPFIPAP 360


>gi|134276943 separase [Homo sapiens]
          Length = 2120

 Score = 28.5 bits (62), Expect = 3.1
 Identities = 14/32 (43%), Positives = 18/32 (56%)

Query: 31  EALPFQDCLCQMLDLVKPRTEGKITLQDLKRC 62
           EA    + LCQ L LVKP T  ++  + L RC
Sbjct: 475 EACAISEPLCQHLGLVKPGTYPEVPPEKLHRC 506


>gi|187937179 apoptosis-associated tyrosine kinase [Homo sapiens]
          Length = 1374

 Score = 28.5 bits (62), Expect = 3.1
 Identities = 29/114 (25%), Positives = 42/114 (36%), Gaps = 18/114 (15%)

Query: 57   QDLKRCKLANVFFDTFFNIEKYLDHEQ-------------KEQISLLRDGDSGGPELSDW 103
            +DL+R K A  FFD   ++  YL  ++             KE       G  G P   + 
Sbjct: 1223 EDLERKKKAVSFFD---DVTVYLFDQESPTRELGEPFPGAKESPPTFLRGSPGSPSAPNR 1279

Query: 104  EKYAAEEYDILVAEETAGEPWEDGFEAELSPVEQKLSALRSPLAQRPFFEAPSP 157
             + A    +   AEE  G  W+D F   L   +   +    P A  P    P+P
Sbjct: 1280 PQQADGSPNGSTAEEGGGFAWDDDF--PLMTAKAAFAMALDPAAPAPAAPTPTP 1331


>gi|139394646 iroquois homeobox protein 5 [Homo sapiens]
          Length = 483

 Score = 28.5 bits (62), Expect = 3.1
 Identities = 29/97 (29%), Positives = 40/97 (41%), Gaps = 23/97 (23%)

Query: 80  DHEQKEQISLLRD-----------GDSGGPELSDWEKYAAEEYDIL------VAEETAGE 122
           D E++E I L ++           GD  GPE    E+ AA   + L        +ET G 
Sbjct: 187 DEEEEENIDLEKNDEDEPQKPEDKGDPEGPEAGGAEQKAASGCERLQGPPTPAGKETEGS 246

Query: 123 PWEDGFEAELSPVEQKLSALRSPLAQRPFFEAPSPLG 159
             +  F+    P E +L AL+ P    P    PSP G
Sbjct: 247 LSDSDFKE--PPSEGRLDALQGP----PRTGGPSPAG 277


>gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens]
          Length = 2230

 Score = 28.1 bits (61), Expect = 4.1
 Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 4/54 (7%)

Query: 58   DLKRCKLANVFFDTFFNIEKYLDHEQKEQISLLRDGDSGGPELSDWEKYAAEEY 111
            D ++C+L +   D  F +    D   KE+IS L   D    + S+W+K A   +
Sbjct: 1404 DEEKCELLDQVQDLSFKV----DTLSKEKISALEQVDDWSNKFSEWKKKAQSRF 1453


>gi|19923599 calmin [Homo sapiens]
          Length = 1002

 Score = 28.1 bits (61), Expect = 4.1
 Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 3/60 (5%)

Query: 115 VAEETAGEPWEDGFEAELSPVEQKLSALRSPLAQRPFFEAPSPLGAVDLYEYACGDEDLE 174
           V+ ET G   E+G + + SP   K+S +   L   P +E   PL AV L  Y    EDL+
Sbjct: 695 VSLETLGSHSEEGLDFKPSPPLSKVSVIPHDLFYFPHYEV--PLAAV-LEAYVEDPEDLK 751


>gi|120432044 vav 3 guanine nucleotide exchange factor isoform 1
           [Homo sapiens]
          Length = 847

 Score = 27.7 bits (60), Expect = 5.4
 Identities = 30/97 (30%), Positives = 41/97 (42%), Gaps = 13/97 (13%)

Query: 39  LCQMLDLVKPRTEGKI--TLQDLKRCKLANVFFDTFFNIEKYLDHEQKEQISLLRDGDSG 96
           L +  DL   R  GK+  TL  L R  +A       F  E+ ++ E         D   G
Sbjct: 93  LFEAFDLFDVRDFGKVIETLSRLSRTPIALATGIRPFPTEESINDE---------DIYKG 143

Query: 97  GPELSDWEKYAAEE--YDILVAEETAGEPWEDGFEAE 131
            P+L D      EE  YD +  E+  GE +ED  +AE
Sbjct: 144 LPDLIDETLVEDEEDLYDCVYGEDEGGEVYEDLMKAE 180


>gi|169216384 PREDICTED: similar to hCG1805148 [Homo sapiens]
          Length = 476

 Score = 27.3 bits (59), Expect = 7.0
 Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 2/38 (5%)

Query: 108 AEEYDILVAEETAGEPWEDGFEAELSP--VEQKLSALR 143
           AE    L AEETAGE    G  A+  P  V+Q+++A+R
Sbjct: 275 AEVAAFLQAEETAGEVEASGLVAQTLPALVQQRVNAVR 312


>gi|169216638 PREDICTED: similar to hCG1805148 [Homo sapiens]
          Length = 476

 Score = 27.3 bits (59), Expect = 7.0
 Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 2/38 (5%)

Query: 108 AEEYDILVAEETAGEPWEDGFEAELSP--VEQKLSALR 143
           AE    L AEETAGE    G  A+  P  V+Q+++A+R
Sbjct: 275 AEVAAFLQAEETAGEVEASGLVAQTLPALVQQRVNAVR 312


>gi|155030232 proline, glutamic acid and leucine rich protein 1
           [Homo sapiens]
          Length = 1130

 Score = 27.3 bits (59), Expect = 7.0
 Identities = 15/59 (25%), Positives = 29/59 (49%)

Query: 80  DHEQKEQISLLRDGDSGGPELSDWEKYAAEEYDILVAEETAGEPWEDGFEAELSPVEQK 138
           D E++E+     + +    E  D+E+   +E +    EE   E +E+ FE E   +E++
Sbjct: 887 DEEEEEEEEEEEEEEEEEEEEEDFEEEEEDEEEYFEEEEEEEEEFEEEFEEEEGELEEE 945


>gi|20270349 MIT, microtubule interacting and transport, domain
          containing 1 [Homo sapiens]
          Length = 249

 Score = 27.3 bits (59), Expect = 7.0
 Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 5/51 (9%)

Query: 38 CLCQMLDLVKPRTEGKITLQDLKRCKLA---NVFFDTFFNIEKYLDHEQKE 85
          C  + +DL+    +G  T  + KRC L    + + D   NI+KYLD E+++
Sbjct: 37 CYQEGIDLLLQVLKG--TKDNTKRCNLREKISKYMDRAENIKKYLDQEKED 85


>gi|117968621 MACRO domain containing 2 isoform 1 [Homo sapiens]
          Length = 425

 Score = 26.9 bits (58), Expect = 9.2
 Identities = 13/41 (31%), Positives = 24/41 (58%), Gaps = 6/41 (14%)

Query: 72  FFNIEKYLDHEQKEQISLLRDGDSGGPELSDWEKYAAEEYD 112
           FF+++   ++E++E + +  D D  GPE    EK + EE +
Sbjct: 239 FFSVDD--NNEEEEDVEMKEDSDENGPE----EKQSVEEME 273


>gi|74325776 MACRO domain containing 2 isoform 2 [Homo sapiens]
          Length = 213

 Score = 26.9 bits (58), Expect = 9.2
 Identities = 13/41 (31%), Positives = 24/41 (58%), Gaps = 6/41 (14%)

Query: 72  FFNIEKYLDHEQKEQISLLRDGDSGGPELSDWEKYAAEEYD 112
           FF+++   ++E++E + +  D D  GPE    EK + EE +
Sbjct: 4   FFSVDD--NNEEEEDVEMKEDSDENGPE----EKQSVEEME 38


>gi|145553976 zinc finger, CW type with coiled-coil domain 2 isoform
           a [Homo sapiens]
          Length = 937

 Score = 26.9 bits (58), Expect = 9.2
 Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 4/61 (6%)

Query: 90  LRDGDSGGPELSDWEKYAAEEYDILVAEETAGEPWEDGFEAELSPVEQKLSALRSPLAQR 149
           +R   +G  EL     +  ++YDILV++    E    G  +EL   E  L A    L  +
Sbjct: 223 IRRNKNGKSELD----FDTDQYDILVSDFDTEEKMTGGVTSELPETEYSLRAFCGILYMK 278

Query: 150 P 150
           P
Sbjct: 279 P 279


>gi|145553971 zinc finger, CW type with coiled-coil domain 2 isoform
           b [Homo sapiens]
          Length = 900

 Score = 26.9 bits (58), Expect = 9.2
 Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 4/61 (6%)

Query: 90  LRDGDSGGPELSDWEKYAAEEYDILVAEETAGEPWEDGFEAELSPVEQKLSALRSPLAQR 149
           +R   +G  EL     +  ++YDILV++    E    G  +EL   E  L A    L  +
Sbjct: 223 IRRNKNGKSELD----FDTDQYDILVSDFDTEEKMTGGVTSELPETEYSLRAFCGILYMK 278

Query: 150 P 150
           P
Sbjct: 279 P 279


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.317    0.138    0.413 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,294,070
Number of Sequences: 37866
Number of extensions: 323259
Number of successful extensions: 787
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 775
Number of HSP's gapped (non-prelim): 33
length of query: 176
length of database: 18,247,518
effective HSP length: 95
effective length of query: 81
effective length of database: 14,650,248
effective search space: 1186670088
effective search space used: 1186670088
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.