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Search of human proteins with 41282051
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|41282051 pyrin and HIN domain family, member 1 beta 2
isoform [Homo sapiens]
(452 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|41282051 pyrin and HIN domain family, member 1 beta 2 isoform... 894 0.0
gi|41282056 pyrin and HIN domain family, member 1 beta 1 isoform... 886 0.0
gi|41282048 pyrin and HIN domain family, member 1 alpha 2 isofor... 878 0.0
gi|39540514 pyrin and HIN domain family, member 1 alpha 1 isofor... 870 0.0
gi|112789562 interferon, gamma-inducible protein 16 [Homo sapiens] 594 e-170
gi|4505227 myeloid cell nuclear differentiation antigen [Homo sa... 393 e-109
gi|4757734 absent in melanoma 2 [Homo sapiens] 172 6e-43
gi|169161845 PREDICTED: similar to hCG2041495 [Homo sapiens] 134 2e-31
gi|169162310 PREDICTED: similar to hCG2041495 [Homo sapiens] 132 5e-31
gi|169162679 PREDICTED: hypothetical protein LOC646377 [Homo sap... 132 5e-31
gi|71044479 death inducer-obliterator 1 isoform c [Homo sapiens] 43 5e-04
gi|197276602 microtubule-associated protein 4 isoform 5 [Homo sa... 41 0.003
gi|197276600 microtubule-associated protein 4 isoform 4 [Homo sa... 41 0.003
gi|47519675 microtubule-associated protein 4 isoform 2 [Homo sap... 41 0.003
gi|47519639 microtubule-associated protein 4 isoform 1 [Homo sap... 41 0.003
gi|50409756 SRp25 nuclear protein isoform 1 [Homo sapiens] 40 0.006
gi|6912458 calcineurin binding protein 1 [Homo sapiens] 38 0.016
gi|5174573 myeloid/lymphoid or mixed-lineage leukemia trithorax ... 38 0.022
gi|239740773 PREDICTED: similar to diffuse panbronchiolitis crit... 37 0.048
gi|95147555 microtubule-associated protein 1A [Homo sapiens] 37 0.048
gi|71979937 sialophorin [Homo sapiens] 37 0.048
gi|4507181 sialophorin [Homo sapiens] 37 0.048
gi|50409691 SRp25 nuclear protein isoform 4 [Homo sapiens] 36 0.063
gi|50409707 SRp25 nuclear protein isoform 2 [Homo sapiens] 36 0.063
gi|238624188 diffuse panbronchiolitis critical region 1 protein ... 36 0.082
gi|27436933 orthodenticle homeobox 2 isoform b [Homo sapiens] 35 0.11
gi|11119420 orthodenticle homeobox 2 isoform a [Homo sapiens] 35 0.11
gi|115298682 HBxAg transactivated protein 2 [Homo sapiens] 35 0.11
gi|13259510 dynactin 1 isoform 1 [Homo sapiens] 35 0.14
gi|121114302 cullin 4B isoform 2 [Homo sapiens] 35 0.14
>gi|41282051 pyrin and HIN domain family, member 1 beta 2 isoform
[Homo sapiens]
Length = 452
Score = 894 bits (2309), Expect = 0.0
Identities = 452/452 (100%), Positives = 452/452 (100%)
Query: 1 MANNYKKIVLLKGLEVINDYHFRIVKSLLSNDLKLNPKMKEEYDKIQIADLMEEKFPGDA 60
MANNYKKIVLLKGLEVINDYHFRIVKSLLSNDLKLNPKMKEEYDKIQIADLMEEKFPGDA
Sbjct: 1 MANNYKKIVLLKGLEVINDYHFRIVKSLLSNDLKLNPKMKEEYDKIQIADLMEEKFPGDA 60
Query: 61 GLGKLIEFFKEIPTLGDLAETLKREKLKVKGIIPSKKTKQKEVYPATPACTPSNRLTAKG 120
GLGKLIEFFKEIPTLGDLAETLKREKLKVKGIIPSKKTKQKEVYPATPACTPSNRLTAKG
Sbjct: 61 GLGKLIEFFKEIPTLGDLAETLKREKLKVKGIIPSKKTKQKEVYPATPACTPSNRLTAKG 120
Query: 121 AEETLGPQKRKKPSEEETGTKRSKMSKEQTRPSCSAGASTSTAMGRSPPPQTSSSAPPNT 180
AEETLGPQKRKKPSEEETGTKRSKMSKEQTRPSCSAGASTSTAMGRSPPPQTSSSAPPNT
Sbjct: 121 AEETLGPQKRKKPSEEETGTKRSKMSKEQTRPSCSAGASTSTAMGRSPPPQTSSSAPPNT 180
Query: 181 SSTESLKPLANRHATASKNIFREDPIIAMVLNATKVFKYESSENEQRRMFHATVATQTQF 240
SSTESLKPLANRHATASKNIFREDPIIAMVLNATKVFKYESSENEQRRMFHATVATQTQF
Sbjct: 181 SSTESLKPLANRHATASKNIFREDPIIAMVLNATKVFKYESSENEQRRMFHATVATQTQF 240
Query: 241 FHVKVLNINLKRKFIKKRIIIISNYSKRNSLLEVNEASSVSEAGPDQTFEVPKDIIRRAK 300
FHVKVLNINLKRKFIKKRIIIISNYSKRNSLLEVNEASSVSEAGPDQTFEVPKDIIRRAK
Sbjct: 241 FHVKVLNINLKRKFIKKRIIIISNYSKRNSLLEVNEASSVSEAGPDQTFEVPKDIIRRAK 300
Query: 301 KIPKINILHKQTSGYIVYGLFMLHTKIVNRKTTIYEIQDKTGSMAVVGKGECHNIPCEKG 360
KIPKINILHKQTSGYIVYGLFMLHTKIVNRKTTIYEIQDKTGSMAVVGKGECHNIPCEKG
Sbjct: 301 KIPKINILHKQTSGYIVYGLFMLHTKIVNRKTTIYEIQDKTGSMAVVGKGECHNIPCEKG 360
Query: 361 DKLRLFCFRLRKRENMSKLMSEMHSFIQIQKNTNQRSHDSRSMALPQEQSQHPKPSEAST 420
DKLRLFCFRLRKRENMSKLMSEMHSFIQIQKNTNQRSHDSRSMALPQEQSQHPKPSEAST
Sbjct: 361 DKLRLFCFRLRKRENMSKLMSEMHSFIQIQKNTNQRSHDSRSMALPQEQSQHPKPSEAST 420
Query: 421 TLPESHLKTPQMPPTTPSSSSFTKVTKDKDIK 452
TLPESHLKTPQMPPTTPSSSSFTKVTKDKDIK
Sbjct: 421 TLPESHLKTPQMPPTTPSSSSFTKVTKDKDIK 452
>gi|41282056 pyrin and HIN domain family, member 1 beta 1 isoform
[Homo sapiens]
Length = 461
Score = 886 bits (2289), Expect = 0.0
Identities = 452/461 (98%), Positives = 452/461 (98%), Gaps = 9/461 (1%)
Query: 1 MANNYKKIVLLKGLEVINDYHFRIVKSLLSNDLKLNPKMKEEYDKIQIADLMEEKFPGDA 60
MANNYKKIVLLKGLEVINDYHFRIVKSLLSNDLKLNPKMKEEYDKIQIADLMEEKFPGDA
Sbjct: 1 MANNYKKIVLLKGLEVINDYHFRIVKSLLSNDLKLNPKMKEEYDKIQIADLMEEKFPGDA 60
Query: 61 GLGKLIEFFKEIPTLGDLAETLKREKLKV---------KGIIPSKKTKQKEVYPATPACT 111
GLGKLIEFFKEIPTLGDLAETLKREKLKV KGIIPSKKTKQKEVYPATPACT
Sbjct: 61 GLGKLIEFFKEIPTLGDLAETLKREKLKVANKIESIPVKGIIPSKKTKQKEVYPATPACT 120
Query: 112 PSNRLTAKGAEETLGPQKRKKPSEEETGTKRSKMSKEQTRPSCSAGASTSTAMGRSPPPQ 171
PSNRLTAKGAEETLGPQKRKKPSEEETGTKRSKMSKEQTRPSCSAGASTSTAMGRSPPPQ
Sbjct: 121 PSNRLTAKGAEETLGPQKRKKPSEEETGTKRSKMSKEQTRPSCSAGASTSTAMGRSPPPQ 180
Query: 172 TSSSAPPNTSSTESLKPLANRHATASKNIFREDPIIAMVLNATKVFKYESSENEQRRMFH 231
TSSSAPPNTSSTESLKPLANRHATASKNIFREDPIIAMVLNATKVFKYESSENEQRRMFH
Sbjct: 181 TSSSAPPNTSSTESLKPLANRHATASKNIFREDPIIAMVLNATKVFKYESSENEQRRMFH 240
Query: 232 ATVATQTQFFHVKVLNINLKRKFIKKRIIIISNYSKRNSLLEVNEASSVSEAGPDQTFEV 291
ATVATQTQFFHVKVLNINLKRKFIKKRIIIISNYSKRNSLLEVNEASSVSEAGPDQTFEV
Sbjct: 241 ATVATQTQFFHVKVLNINLKRKFIKKRIIIISNYSKRNSLLEVNEASSVSEAGPDQTFEV 300
Query: 292 PKDIIRRAKKIPKINILHKQTSGYIVYGLFMLHTKIVNRKTTIYEIQDKTGSMAVVGKGE 351
PKDIIRRAKKIPKINILHKQTSGYIVYGLFMLHTKIVNRKTTIYEIQDKTGSMAVVGKGE
Sbjct: 301 PKDIIRRAKKIPKINILHKQTSGYIVYGLFMLHTKIVNRKTTIYEIQDKTGSMAVVGKGE 360
Query: 352 CHNIPCEKGDKLRLFCFRLRKRENMSKLMSEMHSFIQIQKNTNQRSHDSRSMALPQEQSQ 411
CHNIPCEKGDKLRLFCFRLRKRENMSKLMSEMHSFIQIQKNTNQRSHDSRSMALPQEQSQ
Sbjct: 361 CHNIPCEKGDKLRLFCFRLRKRENMSKLMSEMHSFIQIQKNTNQRSHDSRSMALPQEQSQ 420
Query: 412 HPKPSEASTTLPESHLKTPQMPPTTPSSSSFTKVTKDKDIK 452
HPKPSEASTTLPESHLKTPQMPPTTPSSSSFTKVTKDKDIK
Sbjct: 421 HPKPSEASTTLPESHLKTPQMPPTTPSSSSFTKVTKDKDIK 461
>gi|41282048 pyrin and HIN domain family, member 1 alpha 2 isoform
[Homo sapiens]
Length = 483
Score = 878 bits (2269), Expect = 0.0
Identities = 444/444 (100%), Positives = 444/444 (100%)
Query: 1 MANNYKKIVLLKGLEVINDYHFRIVKSLLSNDLKLNPKMKEEYDKIQIADLMEEKFPGDA 60
MANNYKKIVLLKGLEVINDYHFRIVKSLLSNDLKLNPKMKEEYDKIQIADLMEEKFPGDA
Sbjct: 1 MANNYKKIVLLKGLEVINDYHFRIVKSLLSNDLKLNPKMKEEYDKIQIADLMEEKFPGDA 60
Query: 61 GLGKLIEFFKEIPTLGDLAETLKREKLKVKGIIPSKKTKQKEVYPATPACTPSNRLTAKG 120
GLGKLIEFFKEIPTLGDLAETLKREKLKVKGIIPSKKTKQKEVYPATPACTPSNRLTAKG
Sbjct: 61 GLGKLIEFFKEIPTLGDLAETLKREKLKVKGIIPSKKTKQKEVYPATPACTPSNRLTAKG 120
Query: 121 AEETLGPQKRKKPSEEETGTKRSKMSKEQTRPSCSAGASTSTAMGRSPPPQTSSSAPPNT 180
AEETLGPQKRKKPSEEETGTKRSKMSKEQTRPSCSAGASTSTAMGRSPPPQTSSSAPPNT
Sbjct: 121 AEETLGPQKRKKPSEEETGTKRSKMSKEQTRPSCSAGASTSTAMGRSPPPQTSSSAPPNT 180
Query: 181 SSTESLKPLANRHATASKNIFREDPIIAMVLNATKVFKYESSENEQRRMFHATVATQTQF 240
SSTESLKPLANRHATASKNIFREDPIIAMVLNATKVFKYESSENEQRRMFHATVATQTQF
Sbjct: 181 SSTESLKPLANRHATASKNIFREDPIIAMVLNATKVFKYESSENEQRRMFHATVATQTQF 240
Query: 241 FHVKVLNINLKRKFIKKRIIIISNYSKRNSLLEVNEASSVSEAGPDQTFEVPKDIIRRAK 300
FHVKVLNINLKRKFIKKRIIIISNYSKRNSLLEVNEASSVSEAGPDQTFEVPKDIIRRAK
Sbjct: 241 FHVKVLNINLKRKFIKKRIIIISNYSKRNSLLEVNEASSVSEAGPDQTFEVPKDIIRRAK 300
Query: 301 KIPKINILHKQTSGYIVYGLFMLHTKIVNRKTTIYEIQDKTGSMAVVGKGECHNIPCEKG 360
KIPKINILHKQTSGYIVYGLFMLHTKIVNRKTTIYEIQDKTGSMAVVGKGECHNIPCEKG
Sbjct: 301 KIPKINILHKQTSGYIVYGLFMLHTKIVNRKTTIYEIQDKTGSMAVVGKGECHNIPCEKG 360
Query: 361 DKLRLFCFRLRKRENMSKLMSEMHSFIQIQKNTNQRSHDSRSMALPQEQSQHPKPSEAST 420
DKLRLFCFRLRKRENMSKLMSEMHSFIQIQKNTNQRSHDSRSMALPQEQSQHPKPSEAST
Sbjct: 361 DKLRLFCFRLRKRENMSKLMSEMHSFIQIQKNTNQRSHDSRSMALPQEQSQHPKPSEAST 420
Query: 421 TLPESHLKTPQMPPTTPSSSSFTK 444
TLPESHLKTPQMPPTTPSSSSFTK
Sbjct: 421 TLPESHLKTPQMPPTTPSSSSFTK 444
>gi|39540514 pyrin and HIN domain family, member 1 alpha 1 isoform
[Homo sapiens]
Length = 492
Score = 870 bits (2249), Expect = 0.0
Identities = 444/453 (98%), Positives = 444/453 (98%), Gaps = 9/453 (1%)
Query: 1 MANNYKKIVLLKGLEVINDYHFRIVKSLLSNDLKLNPKMKEEYDKIQIADLMEEKFPGDA 60
MANNYKKIVLLKGLEVINDYHFRIVKSLLSNDLKLNPKMKEEYDKIQIADLMEEKFPGDA
Sbjct: 1 MANNYKKIVLLKGLEVINDYHFRIVKSLLSNDLKLNPKMKEEYDKIQIADLMEEKFPGDA 60
Query: 61 GLGKLIEFFKEIPTLGDLAETLKREKLKV---------KGIIPSKKTKQKEVYPATPACT 111
GLGKLIEFFKEIPTLGDLAETLKREKLKV KGIIPSKKTKQKEVYPATPACT
Sbjct: 61 GLGKLIEFFKEIPTLGDLAETLKREKLKVANKIESIPVKGIIPSKKTKQKEVYPATPACT 120
Query: 112 PSNRLTAKGAEETLGPQKRKKPSEEETGTKRSKMSKEQTRPSCSAGASTSTAMGRSPPPQ 171
PSNRLTAKGAEETLGPQKRKKPSEEETGTKRSKMSKEQTRPSCSAGASTSTAMGRSPPPQ
Sbjct: 121 PSNRLTAKGAEETLGPQKRKKPSEEETGTKRSKMSKEQTRPSCSAGASTSTAMGRSPPPQ 180
Query: 172 TSSSAPPNTSSTESLKPLANRHATASKNIFREDPIIAMVLNATKVFKYESSENEQRRMFH 231
TSSSAPPNTSSTESLKPLANRHATASKNIFREDPIIAMVLNATKVFKYESSENEQRRMFH
Sbjct: 181 TSSSAPPNTSSTESLKPLANRHATASKNIFREDPIIAMVLNATKVFKYESSENEQRRMFH 240
Query: 232 ATVATQTQFFHVKVLNINLKRKFIKKRIIIISNYSKRNSLLEVNEASSVSEAGPDQTFEV 291
ATVATQTQFFHVKVLNINLKRKFIKKRIIIISNYSKRNSLLEVNEASSVSEAGPDQTFEV
Sbjct: 241 ATVATQTQFFHVKVLNINLKRKFIKKRIIIISNYSKRNSLLEVNEASSVSEAGPDQTFEV 300
Query: 292 PKDIIRRAKKIPKINILHKQTSGYIVYGLFMLHTKIVNRKTTIYEIQDKTGSMAVVGKGE 351
PKDIIRRAKKIPKINILHKQTSGYIVYGLFMLHTKIVNRKTTIYEIQDKTGSMAVVGKGE
Sbjct: 301 PKDIIRRAKKIPKINILHKQTSGYIVYGLFMLHTKIVNRKTTIYEIQDKTGSMAVVGKGE 360
Query: 352 CHNIPCEKGDKLRLFCFRLRKRENMSKLMSEMHSFIQIQKNTNQRSHDSRSMALPQEQSQ 411
CHNIPCEKGDKLRLFCFRLRKRENMSKLMSEMHSFIQIQKNTNQRSHDSRSMALPQEQSQ
Sbjct: 361 CHNIPCEKGDKLRLFCFRLRKRENMSKLMSEMHSFIQIQKNTNQRSHDSRSMALPQEQSQ 420
Query: 412 HPKPSEASTTLPESHLKTPQMPPTTPSSSSFTK 444
HPKPSEASTTLPESHLKTPQMPPTTPSSSSFTK
Sbjct: 421 HPKPSEASTTLPESHLKTPQMPPTTPSSSSFTK 453
>gi|112789562 interferon, gamma-inducible protein 16 [Homo sapiens]
Length = 729
Score = 594 bits (1532), Expect = e-170
Identities = 308/448 (68%), Positives = 363/448 (81%), Gaps = 1/448 (0%)
Query: 1 MANNYKKIVLLKGLEVINDYHFRIVKSLLSNDLKLNPKMKEEYDKIQIADLMEEKFPGDA 60
M YK IVLLKGLEVINDYHFR+VKSLLSNDLKLN KM+EEYDKIQIADLMEEKF GDA
Sbjct: 1 MGKKYKNIVLLKGLEVINDYHFRMVKSLLSNDLKLNLKMREEYDKIQIADLMEEKFRGDA 60
Query: 61 GLGKLIEFFKEIPTLGDLAETLKREKLKVKGIIPSKKTKQKEVYPATPACTPSNRLTAKG 120
GLGKLI+ F++IPTL DLAETLK+EKLKVKG S+K K KEV +PA + S+ + +G
Sbjct: 61 GLGKLIKIFEDIPTLEDLAETLKKEKLKVKGPALSRKRK-KEVDATSPAPSTSSTVKTEG 119
Query: 121 AEETLGPQKRKKPSEEETGTKRSKMSKEQTRPSCSAGASTSTAMGRSPPPQTSSSAPPNT 180
AE T G QKRKK ++E+ G K SK+S+EQT+P AGA STAMGRSP P+TS SAPPN+
Sbjct: 120 AEATPGAQKRKKSTKEKAGPKGSKVSEEQTQPPSPAGAGMSTAMGRSPSPKTSLSAPPNS 179
Query: 181 SSTESLKPLANRHATASKNIFREDPIIAMVLNATKVFKYESSENEQRRMFHATVATQTQF 240
SSTE+ K +A T +N+ ++ P+I VL+ TK F+YE+ E E++ MFHATVATQTQF
Sbjct: 180 SSTENPKTVAKCQVTPRRNVLQKRPVIVKVLSTTKPFEYETPEMEKKIMFHATVATQTQF 239
Query: 241 FHVKVLNINLKRKFIKKRIIIISNYSKRNSLLEVNEASSVSEAGPDQTFEVPKDIIRRAK 300
FHVKVLN +LK KF K+IIIIS+Y + +SLLEVNE S+VSEAGP+QTFEVP II RAK
Sbjct: 240 FHVKVLNTSLKEKFNGKKIIIISDYLEYDSLLEVNEESTVSEAGPNQTFEVPNKIINRAK 299
Query: 301 KIPKINILHKQTSGYIVYGLFMLHTKIVNRKTTIYEIQDKTGSMAVVGKGECHNIPCEKG 360
+ KI+ILHKQ SG IVYG+FMLH K VN+KTTIYEIQD G M VVG G+CHNIPCE+G
Sbjct: 300 ETLKIDILHKQASGNIVYGVFMLHKKTVNQKTTIYEIQDDRGKMDVVGTGQCHNIPCEEG 359
Query: 361 DKLRLFCFRLRKRENMSKLMSEMHSFIQIQKNTNQRSHDSRSMALPQEQSQHPKPSEAST 420
DKL+LFCFRLRK+ MSKL+SEMHSFIQI+K TN R++D +SM LPQEQ Q P PSEAST
Sbjct: 360 DKLQLFCFRLRKKNQMSKLISEMHSFIQIKKKTNPRNNDPKSMKLPQEQRQLPYPSEAST 419
Query: 421 TLPESHLKTPQMPPTTPSSSSFTKVTKD 448
T PESHL+TPQMPPTTPSSS FTK ++D
Sbjct: 420 TFPESHLRTPQMPPTTPSSSFFTKKSED 447
Score = 177 bits (449), Expect = 2e-44
Identities = 118/298 (39%), Positives = 154/298 (51%), Gaps = 21/298 (7%)
Query: 105 PATPACTPSNRLTAKGAEETLGPQKRKKPSEEETGTKRSKMSKEQTRPSCSAGASTSTAM 164
P P TPS+ K +E+T+ R ++ KE + S A
Sbjct: 429 PQMPPTTPSSSFFTKKSEDTISKMN---------DFMRMQILKEGSHFPGPFMTSIGPAE 479
Query: 165 GRSPPPQTSSSAPPNTSSTESLKPLANRHATASKNIFREDPIIA-----MVLNATKVFKY 219
PQ PP+T S+ L L R T + + ED + MVLNAT+ F Y
Sbjct: 480 SHPHTPQM----PPSTPSSSFLTTLKPRLKTEPEEVSIEDSAQSDLKEVMVLNATESFVY 535
Query: 220 ESSENEQRRMFHATVATQTQFFHVKVLNINLKRKFIKKRIIIISNYSKRNSLLEVNEASS 279
E E Q++MFHATVAT+ + F VKV NI+LK KF K+II I+NY RN LEV +
Sbjct: 536 EPKE--QKKMFHATVATENEVFRVKVFNIDLKEKFTPKKIIAIANYVCRNGFLEVYPFTL 593
Query: 280 VSEAGPDQTFEVPKDIIRRAKKIPKINILHKQTSGYIVYGLFMLHTKIVNRKTTIYEIQD 339
V++ D+ E+PK +IR A PKIN L QT G V G+F +H K V + T YEIQD
Sbjct: 594 VADVNADRNMEIPKGLIRSASVTPKINQLCSQTKGSFVNGVFEVHKKNVRGEFTYYEIQD 653
Query: 340 KTGSMAVVGKGECHNIPCEKGDKLRLFCFRLR-KRENMSKLMSEMHSFIQIQKNTNQR 396
TG M VV G I CE+GDKL+L CF L K N +L S +HS I++ K +
Sbjct: 654 NTGKMEVVVHGRLTTINCEEGDKLKLTCFELAPKSGNTGELRSVIHSHIKVIKTRKNK 711
>gi|4505227 myeloid cell nuclear differentiation antigen [Homo
sapiens]
Length = 407
Score = 393 bits (1009), Expect = e-109
Identities = 212/397 (53%), Positives = 277/397 (69%), Gaps = 8/397 (2%)
Query: 1 MANNYKKIVLLKGLEVINDYHFRIVKSLLSNDLKLNPKMKEEYDKIQIADLMEEKFPGDA 60
M N YKKI+LLKG E+++DYHF +KSLL+ DL L KM+EEY++I+I DLME+KF G A
Sbjct: 1 MVNEYKKILLLKGFELMDDYHFTSIKSLLAYDLGLTTKMQEEYNRIKITDLMEKKFQGVA 60
Query: 61 GLGKLIEFFKEIPTLGDLAETLKREKLKVKGII------PSKKTKQKEVYPATPACTPSN 114
L KLIE K++P+L +L L++EK KV I P KK Q+EV A PA T N
Sbjct: 61 CLDKLIELAKDMPSLKNLVNNLRKEKSKVAKKIKTQEKAPVKKINQEEVGLAAPAPTARN 120
Query: 115 RLTAKGAEETLGPQKRKKPSEEETGTKRSKMSKEQTRPSCSAGASTSTAMGRSPPPQTSS 174
+LT++ QKRK P++E+T KR+K+S+EQ++P +GASTS A+ P PQTSS
Sbjct: 121 KLTSEARGRIPVAQKRKTPNKEKTEAKRNKVSQEQSKPPGPSGASTSAAVDHPPLPQTSS 180
Query: 175 SAPPNTSSTESLKPLANRHATASKNIFREDPIIAMVLNATKVFKYESSENEQRRMFHATV 234
S P NTS T + + A R A +N+ + DP+ +VL AT FKYES EN + MFHATV
Sbjct: 181 STPSNTSFTPNQETQAQRQVDARRNVPQNDPVTVVVLKATAPFKYESPENGKSTMFHATV 240
Query: 235 ATQTQFFHVKVLNINLKRKFIKKRIIIISNYSKRNSLLEVNEASSVSEAGPDQTFEVPKD 294
A++TQ+FHVKV +INLK KF++K++I IS+YS+ ++E+ EASSVS+ +Q FEVP
Sbjct: 241 ASKTQYFHVKVFDINLKEKFVRKKVITISDYSECKGVMEIKEASSVSDF--NQNFEVPNR 298
Query: 295 IIRRAKKIPKINILHKQTSGYIVYGLFMLHTKIVNRKTTIYEIQDKTGSMAVVGKGECHN 354
II A K PKI+ L+KQ SG +VYGLFML K V++K TIYEIQD TGSM VVG G+ HN
Sbjct: 299 IIEIANKTPKISQLYKQASGTMVYGLFMLQKKSVHKKNTIYEIQDNTGSMDVVGSGKWHN 358
Query: 355 IPCEKGDKLRLFCFRLRKRENMSKLMSEMHSFIQIQK 391
I CEKGDKLRLFC +LR + KL+ HSFI++ K
Sbjct: 359 IKCEKGDKLRLFCLQLRTVDRKLKLVCGSHSFIKVIK 395
Score = 45.1 bits (105), Expect = 1e-04
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 377 SKLMSEMHSFIQI---QKNTNQRSHDSRSMALPQEQSQHPKPSEASTTLPESHLKTPQMP 433
+KL SE I + +K N+ +++ + QEQS+ P PS AST+ H PQ
Sbjct: 120 NKLTSEARGRIPVAQKRKTPNKEKTEAKRNKVSQEQSKPPGPSGASTSAAVDHPPLPQTS 179
Query: 434 PTTPSSSSFT 443
+TPS++SFT
Sbjct: 180 SSTPSNTSFT 189
>gi|4757734 absent in melanoma 2 [Homo sapiens]
Length = 343
Score = 172 bits (436), Expect = 6e-43
Identities = 125/391 (31%), Positives = 189/391 (48%), Gaps = 53/391 (13%)
Query: 1 MANNYKKIVLLKGLEVINDYHFRIVKSLLSNDLKLNPKMKEEYDKIQIADLMEEKFPGDA 60
M + YK+I+LL GL+ I D K LS++ + ++IQ+A LM + +
Sbjct: 1 MESKYKEILLLTGLDNITDEELDRFKFFLSDEFNIATGKLHTANRIQVATLMIQNAGAVS 60
Query: 61 GLGKLIEFFKEIPTLGDLAETLKREKLKVKGIIPSKKTKQKEVYPATPACTPSNRLTAKG 120
+ K I F+++ + L AK
Sbjct: 61 AVMKTIRIFQKLNYM----------------------------------------LLAKR 80
Query: 121 AEETLGPQKRKKPSEEETGTKRSKMSKEQTRPSCSAGASTSTAMGRSPPPQTSSSAPPNT 180
+E +K K + ++ TK +S+ + P+ SA A R+ P + P
Sbjct: 81 LQE----EKEKVDKQYKSVTKPKPLSQAEMSPAASAAIRNDVAKQRAAPKVSPHVKP--- 133
Query: 181 SSTESLKPLANRHATASKNIFREDPIIAMVLNATKVFKYESSENEQRRMFHATVATQTQF 240
E + +A + + + F++ + MVL A K F +E+ E +Q MFHATVAT+ +F
Sbjct: 134 ---EQKQMVAQQESI--REGFQKRCLPVMVLKAKKPFTFETQEGKQE-MFHATVATEKEF 187
Query: 241 FHVKVLNINLKRKFIKKRIIIISNYSKRNSLLEVNEASSVSEAGPDQTFEVPKDIIRRAK 300
F VKV N LK KFI KRIIII+ Y + + LEVN AS V +A DQ VP +IIR+A
Sbjct: 188 FFVKVFNTLLKDKFIPKRIIIIARYYRHSGFLEVNSASRVLDAESDQKVNVPLNIIRKAG 247
Query: 301 KIPKINILHKQTSGYIVYGLFMLHTKIVNRKTTIYEIQDKTGSMAVVGKGECHNIPCEKG 360
+ PKIN L Q G IV GLF++ +K ++++ D TG M V+G + C++G
Sbjct: 248 ETPKINTLQTQPLGTIVNGLFVVQKVTEKKKNILFDLSDNTGKMEVLGVRNEDTMKCKEG 307
Query: 361 DKLRLFCFRLRKRENMSKLMSEMHSFIQIQK 391
DK+RL F L K +L S +HS I++ K
Sbjct: 308 DKVRLTFFTLSKNGEKLQLTSGVHSTIKVIK 338
>gi|169161845 PREDICTED: similar to hCG2041495 [Homo sapiens]
Length = 196
Score = 134 bits (337), Expect = 2e-31
Identities = 79/156 (50%), Positives = 92/156 (58%), Gaps = 23/156 (14%)
Query: 1 MANNYKKIVLLKGLEVINDYHFRIVKSLLSNDLKLNPKMKEEYDKIQIADLMEEKFPGDA 60
M + YK VLLKGLE INDYHF I+ SLL NDLKLN ++EYDKIQIADLMEEKFPGDA
Sbjct: 41 MVSKYKNNVLLKGLEAINDYHFSIINSLLINDLKLNSTRRDEYDKIQIADLMEEKFPGDA 100
Query: 61 GLGKLIEFFKEIPT-LGDLAETLKREK----------------------LKVKGIIPSKK 97
GLGKL + T GDLAETL++ K + KG SKK
Sbjct: 101 GLGKLRTLQRNTNTGRGDLAETLRKVKRSSALGLDVLLFSLLVVNKIKSIPAKGKTSSKK 160
Query: 98 TKQKEVYPATPACTPSNRLTAKGAEETLGPQKRKKP 133
KQ++V P TP T + TA+G EET Q+ P
Sbjct: 161 RKQRKVGPTTPLATTDKKFTAEGGEETPIAQRFHTP 196
>gi|169162310 PREDICTED: similar to hCG2041495 [Homo sapiens]
Length = 196
Score = 132 bits (333), Expect = 5e-31
Identities = 78/156 (50%), Positives = 91/156 (58%), Gaps = 23/156 (14%)
Query: 1 MANNYKKIVLLKGLEVINDYHFRIVKSLLSNDLKLNPKMKEEYDKIQIADLMEEKFPGDA 60
M + YK VLLKGLE INDYHF I+ SLL NDLKLN ++EYDKIQIADLMEEKFPGDA
Sbjct: 41 MVSKYKNNVLLKGLEAINDYHFSIINSLLINDLKLNSTRRDEYDKIQIADLMEEKFPGDA 100
Query: 61 GLGKLIEFFKEIPT-LGDLAETLKREK----------------------LKVKGIIPSKK 97
G GKL + T GDLAETL++ K + KG SKK
Sbjct: 101 GFGKLRTLQRNTNTGRGDLAETLRKVKRSSALGLDVLLFSLLVVNKIKSIPAKGKTSSKK 160
Query: 98 TKQKEVYPATPACTPSNRLTAKGAEETLGPQKRKKP 133
KQ++V P TP T + TA+G EET Q+ P
Sbjct: 161 RKQRKVGPTTPLATTDKKFTAEGGEETPIAQRFHTP 196
>gi|169162679 PREDICTED: hypothetical protein LOC646377 [Homo
sapiens]
Length = 196
Score = 132 bits (333), Expect = 5e-31
Identities = 78/156 (50%), Positives = 91/156 (58%), Gaps = 23/156 (14%)
Query: 1 MANNYKKIVLLKGLEVINDYHFRIVKSLLSNDLKLNPKMKEEYDKIQIADLMEEKFPGDA 60
M + YK VLLKGLE INDYHF I+ SLL NDLKLN ++EYDKIQIADLMEEKFPGDA
Sbjct: 41 MVSKYKNNVLLKGLEAINDYHFSIINSLLINDLKLNSTRRDEYDKIQIADLMEEKFPGDA 100
Query: 61 GLGKLIEFFKEIPT-LGDLAETLKREK----------------------LKVKGIIPSKK 97
G GKL + T GDLAETL++ K + KG SKK
Sbjct: 101 GFGKLRTLQRNTNTGRGDLAETLRKVKRSSALGLDVLLFSLLVVNKIKSIPAKGKTSSKK 160
Query: 98 TKQKEVYPATPACTPSNRLTAKGAEETLGPQKRKKP 133
KQ++V P TP T + TA+G EET Q+ P
Sbjct: 161 RKQRKVGPTTPLATTDKKFTAEGGEETPIAQRFHTP 196
>gi|71044479 death inducer-obliterator 1 isoform c [Homo sapiens]
Length = 2240
Score = 43.1 bits (100), Expect = 5e-04
Identities = 26/73 (35%), Positives = 32/73 (43%)
Query: 125 LGPQKRKKPSEEETGTKRSKMSKEQTRPSCSAGASTSTAMGRSPPPQTSSSAPPNTSSTE 184
L P++ P+ + T K P CSA A+ ST SPPP PP
Sbjct: 1218 LQPEEADVPAYPKVATVPQSEKKPSKYPLCSADAAVSTTPPGSPPPPPPLPEPPVLKVLS 1277
Query: 185 SLKPLANRHATAS 197
SLKP A ATA+
Sbjct: 1278 SLKPAAPSPATAA 1290
>gi|197276602 microtubule-associated protein 4 isoform 5 [Homo
sapiens]
Length = 817
Score = 40.8 bits (94), Expect = 0.003
Identities = 30/115 (26%), Positives = 46/115 (40%), Gaps = 2/115 (1%)
Query: 83 KREKLKVKGIIPSKKTKQKEVYPATPACTPSNRLTAKGAEETLGPQKRKKPSEEETG-TK 141
K+ G++P+ K+ V A P+ PS + K + P+KR PS+ +
Sbjct: 473 KKPMSLASGLVPAAPPKRPAVASARPSILPSKDVKPKPIADAKAPEKRASPSKPASAPAS 532
Query: 142 RSKMSKEQTRPSCSAGASTSTAMGRSPPPQTSSSAPPNTSSTESLKPLANRHATA 196
RS QT + A+ ++ S P T P TE KP + TA
Sbjct: 533 RSGSKSTQTVAKTTTAAAVASTGPSSRSPSTLLPKKPTAIKTEG-KPAEVKKMTA 586
>gi|197276600 microtubule-associated protein 4 isoform 4 [Homo
sapiens]
Length = 1135
Score = 40.8 bits (94), Expect = 0.003
Identities = 30/115 (26%), Positives = 46/115 (40%), Gaps = 2/115 (1%)
Query: 83 KREKLKVKGIIPSKKTKQKEVYPATPACTPSNRLTAKGAEETLGPQKRKKPSEEETG-TK 141
K+ G++P+ K+ V A P+ PS + K + P+KR PS+ +
Sbjct: 738 KKPMSLASGLVPAAPPKRPAVASARPSILPSKDVKPKPIADAKAPEKRASPSKPASAPAS 797
Query: 142 RSKMSKEQTRPSCSAGASTSTAMGRSPPPQTSSSAPPNTSSTESLKPLANRHATA 196
RS QT + A+ ++ S P T P TE KP + TA
Sbjct: 798 RSGSKSTQTVAKTTTAAAVASTGPSSRSPSTLLPKKPTAIKTEG-KPAEVKKMTA 851
>gi|47519675 microtubule-associated protein 4 isoform 2 [Homo
sapiens]
Length = 887
Score = 40.8 bits (94), Expect = 0.003
Identities = 30/115 (26%), Positives = 46/115 (40%), Gaps = 2/115 (1%)
Query: 83 KREKLKVKGIIPSKKTKQKEVYPATPACTPSNRLTAKGAEETLGPQKRKKPSEEETG-TK 141
K+ G++P+ K+ V A P+ PS + K + P+KR PS+ +
Sbjct: 473 KKPMSLASGLVPAAPPKRPAVASARPSILPSKDVKPKPIADAKAPEKRASPSKPASAPAS 532
Query: 142 RSKMSKEQTRPSCSAGASTSTAMGRSPPPQTSSSAPPNTSSTESLKPLANRHATA 196
RS QT + A+ ++ S P T P TE KP + TA
Sbjct: 533 RSGSKSTQTVAKTTTAAAVASTGPSSRSPSTLLPKKPTAIKTEG-KPAEVKKMTA 586
>gi|47519639 microtubule-associated protein 4 isoform 1 [Homo
sapiens]
Length = 1152
Score = 40.8 bits (94), Expect = 0.003
Identities = 30/115 (26%), Positives = 46/115 (40%), Gaps = 2/115 (1%)
Query: 83 KREKLKVKGIIPSKKTKQKEVYPATPACTPSNRLTAKGAEETLGPQKRKKPSEEETG-TK 141
K+ G++P+ K+ V A P+ PS + K + P+KR PS+ +
Sbjct: 738 KKPMSLASGLVPAAPPKRPAVASARPSILPSKDVKPKPIADAKAPEKRASPSKPASAPAS 797
Query: 142 RSKMSKEQTRPSCSAGASTSTAMGRSPPPQTSSSAPPNTSSTESLKPLANRHATA 196
RS QT + A+ ++ S P T P TE KP + TA
Sbjct: 798 RSGSKSTQTVAKTTTAAAVASTGPSSRSPSTLLPKKPTAIKTEG-KPAEVKKMTA 851
>gi|50409756 SRp25 nuclear protein isoform 1 [Homo sapiens]
Length = 360
Score = 39.7 bits (91), Expect = 0.006
Identities = 27/85 (31%), Positives = 39/85 (45%), Gaps = 7/85 (8%)
Query: 118 AKGAEETLGPQKRKKPSEEETG---TKRSKMSKEQTRPSCSAGASTSTAMGRSPPPQTSS 174
A+GA +G +KR + G KR K S++ T +CSA ST+ GR +
Sbjct: 120 ARGAMAHVGSRKRSRSRSRSRGRGSEKRKKKSRKDTSRNCSA----STSQGRKASTAPGA 175
Query: 175 SAPPNTSSTESLKPLANRHATASKN 199
A P+ TE K A R +S +
Sbjct: 176 EASPSPCITERSKQKARRRTRSSSS 200
Score = 32.3 bits (72), Expect = 0.90
Identities = 26/102 (25%), Positives = 50/102 (49%), Gaps = 7/102 (6%)
Query: 75 LGDLAETLKREKLKVKGIIPSKKTKQKEVYPATPACTPSNRLTAKGAEETLGPQKRKKPS 134
+G + R + + +G S+K K+K + C+ S T++G + + P PS
Sbjct: 127 VGSRKRSRSRSRSRGRG---SEKRKKKSRKDTSRNCSAS---TSQGRKASTAPGAEASPS 180
Query: 135 EEETGTKRSKMSKEQTRPSCSAGASTSTAMGRSPPPQTSSSA 176
T + K ++ +TR S S+ +S+S++ S +SSS+
Sbjct: 181 PCITERSKQK-ARRRTRSSSSSSSSSSSSSSSSSSSSSSSSS 221
>gi|6912458 calcineurin binding protein 1 [Homo sapiens]
Length = 2220
Score = 38.1 bits (87), Expect = 0.016
Identities = 24/87 (27%), Positives = 33/87 (37%), Gaps = 1/87 (1%)
Query: 105 PATPACTPSNRLTAKGAEETLGPQKRKKPSEEETGTKRSKMSKEQTRPSCSAGASTSTAM 164
PA P C P+ GAE T + + +P G + S+ Q S AS+
Sbjct: 2046 PAEPHCWPAEAALGTGAEPTCSQEGKLRPEPRRDGEAQEAASETQPLSSPPTAASSKAPS 2105
Query: 165 GRSPPPQTSSSAPPNTSSTESLKPLAN 191
S P P S +S +PL N
Sbjct: 2106 SGSAQPPEGHPGKPEPSRAKS-RPLPN 2131
>gi|5174573 myeloid/lymphoid or mixed-lineage leukemia trithorax
homolog 2 [Homo sapiens]
Length = 1210
Score = 37.7 bits (86), Expect = 0.022
Identities = 39/169 (23%), Positives = 69/169 (40%), Gaps = 15/169 (8%)
Query: 64 KLIEFFKEIPTLGDLAETLKREKLKVKGIIPSKKTKQKEVYPATPACTPSNR------LT 117
K I KEI + + + +E K K PS ++ +KE+ P P + S +
Sbjct: 825 KKIRLEKEIKSQSSSSSSSHKESSKTKPSRPSSQSSKKEMLPPPPVSSSSQKPAKPALKR 884
Query: 118 AKGAEETLGPQKRKKPSEEETGTKRSKMSKEQ------TRPSCS-AGASTSTAMGRSPPP 170
++ +T G K S ++ K S + K++ +R S G+S TA P
Sbjct: 885 SRREADTCGQDPPKSASSTKSNHKDSSIPKQRRVEGKGSRSSSEHKGSSGDTANPFPVPS 944
Query: 171 QTSSSAPPNTSSTESLKPLANRHATASKNIFREDPIIAMVLNATKVFKY 219
+ ++ P + K A+ H +K + ++ + M K FKY
Sbjct: 945 LPNGNSKPGKPQVKFDKQQADLHMREAKKMKQKAEL--MTDRVGKAFKY 991
>gi|239740773 PREDICTED: similar to diffuse panbronchiolitis
critical region 1 [Homo sapiens]
Length = 1400
Score = 36.6 bits (83), Expect = 0.048
Identities = 48/205 (23%), Positives = 80/205 (39%), Gaps = 37/205 (18%)
Query: 111 TPSNRLTAKGAEETLGPQKRKKPSEEETGTKRSKMSKEQTRPSCSAGASTSTAMGRSPPP 170
TPS + E T + P+E R+ ++ E+T PS + +
Sbjct: 596 TPSPAEPTENRERTANEKTTPSPAEPTENGDRTPLANEKTTPSLAEPTENGQRTPFANEK 655
Query: 171 QTSSSAPP----------NTSSTES-LKPLANRHATASKNIFRE--DPIIAMVLNA---T 214
TSSSA P N ++T S +P NR TA++N P + A T
Sbjct: 656 TTSSSAEPTEHEERTPLANENTTPSPAEPTENRERTANENTTPSPAGPTENREMTANEKT 715
Query: 215 KVFKYESSENEQRRMFHATVAT---------QTQFFHVKVLNINLKRKFIKKRIIIISNY 265
+F E +EN +R T ++ +T F + K + + + + +
Sbjct: 716 TLFPAEPTENRERTANEKTTSSPAEPTENGQRTPFANEKTTSSSAEP----------TEH 765
Query: 266 SKRNSLLEVNEASSVSEAGPDQTFE 290
+R L NE +++S AGP + E
Sbjct: 766 GERTPL--ANENTTLSPAGPTENRE 788
Score = 33.5 bits (75), Expect = 0.41
Identities = 26/104 (25%), Positives = 42/104 (40%), Gaps = 3/104 (2%)
Query: 94 PSKKTKQKEVYPATPACTPSNRLTAKGAEETLGPQKRKKPSEEETGTKRSKMSKEQTRPS 153
P+ T+ +E A TP + E T P++ R+ ++ E+T PS
Sbjct: 780 PAGPTENRE-RTANEKTTPFPAEPTENRERTANENTTPSPAQPTENGDRTPLANEKTTPS 838
Query: 154 CSAGASTSTAMGRSPPPQTSSSAPPNTSSTESLKPLANRHATAS 197
+ + TSSSA P + + PLAN + T+S
Sbjct: 839 LAEPTENGKRTPFANEKTTSSSAEPTEHAERT--PLANENTTSS 880
Score = 30.0 bits (66), Expect = 4.5
Identities = 29/124 (23%), Positives = 43/124 (34%), Gaps = 19/124 (15%)
Query: 325 TKIVNRKTTIYEIQDKTGSMAVVGKGECHNIPCEKGDKLRLFCFRLRKRENMSKLMSEMH 384
+KI RK+T TG V K + P EK + K + H
Sbjct: 226 SKINCRKST-------TGKSTVTRKSDKTGRPLEKS------------MSTLDKTSTSSH 266
Query: 385 SFIQIQKNTNQRSHDSRSMALPQEQSQHPKPSEASTTLPESHLKTPQMPPTTPSSSSFTK 444
N+ +S + P++ + K + +T PE KT T S TK
Sbjct: 267 KTTTSFHNSGNSQTKQKSTSFPEKITAASKTTYKTTGTPEESEKTEDSRTTVASDKLLTK 326
Query: 445 VTKD 448
TK+
Sbjct: 327 TTKN 330
>gi|95147555 microtubule-associated protein 1A [Homo sapiens]
Length = 2803
Score = 36.6 bits (83), Expect = 0.048
Identities = 35/132 (26%), Positives = 57/132 (43%), Gaps = 9/132 (6%)
Query: 56 FPGDAGLGKLIEFFKEIPTLGDLAETLKREKLKVKGIIPSKKTKQKEVYPATPACTPSNR 115
FPG+A K++E +++ L L + +K G +P+ K A S +
Sbjct: 267 FPGNAPQNKILEGLEKLRHLDFLRYPVATQKDLASGAVPTNLKPSKIKQRAD--SKESLK 324
Query: 116 LTAKGAEETLGPQKRKKPSEEETGTKRSKMSKEQTRPSCSAGASTSTAMGRSPPPQTSSS 175
T K A L KR++ EE RS+++KE + A S+ PP + +
Sbjct: 325 ATTKTAVSKLA--KREEVVEEGAKEARSELAKELAKTEKKAKESS-----EKPPEKPAKP 377
Query: 176 APPNTSSTESLK 187
T S+E+LK
Sbjct: 378 ERVKTESSEALK 389
>gi|71979937 sialophorin [Homo sapiens]
Length = 400
Score = 36.6 bits (83), Expect = 0.048
Identities = 48/230 (20%), Positives = 82/230 (35%), Gaps = 24/230 (10%)
Query: 78 LAETLKREKLKVKGIIPSKKTKQKEVYPATPACTPS--NRLTAKGAEETLGPQKRKKPSE 135
L E +++ +K ++T +PA P S + G T P+ + S
Sbjct: 89 LPEPTTYQEVSIKMSSVPQETPHATSHPAVPITANSLGSHTVTGGTITTNSPETSSRTSG 148
Query: 136 EETGTKRSKMSKEQTR---PSCSAGASTSTAMGRSPPP----------QTSSSAPPNTSS 182
T S + + P A S T+ G S PP T ++ PP T +
Sbjct: 149 APVTTAASSLETSRGTSGPPLTMATVSLETSKGTSGPPVTMATDSLETSTGTTGPPVTMT 208
Query: 183 TESLKPLANRHATASKNIFREDPIIAMVLNATKVFKYESSENEQRRMFHATVATQTQFFH 242
T SL+P + ++ + + + + R M V
Sbjct: 209 TGSLEPSSGASGPQVSSVKLSTMMSPTTSTNASTVPFRNPDENSRGMLPVAVLVALLAVI 268
Query: 243 VKVLNINLKRKFIKKR--IIIISNYSKRNSLLEVNEASSVSEAGPDQTFE 290
V V + L R+ K+R +++S KRN +++ + AGP Q E
Sbjct: 269 VLVALLLLWRRRQKRRTGALVLSRGGKRNGVVD-------AWAGPAQVPE 311
>gi|4507181 sialophorin [Homo sapiens]
Length = 400
Score = 36.6 bits (83), Expect = 0.048
Identities = 48/230 (20%), Positives = 82/230 (35%), Gaps = 24/230 (10%)
Query: 78 LAETLKREKLKVKGIIPSKKTKQKEVYPATPACTPS--NRLTAKGAEETLGPQKRKKPSE 135
L E +++ +K ++T +PA P S + G T P+ + S
Sbjct: 89 LPEPTTYQEVSIKMSSVPQETPHATSHPAVPITANSLGSHTVTGGTITTNSPETSSRTSG 148
Query: 136 EETGTKRSKMSKEQTR---PSCSAGASTSTAMGRSPPP----------QTSSSAPPNTSS 182
T S + + P A S T+ G S PP T ++ PP T +
Sbjct: 149 APVTTAASSLETSRGTSGPPLTMATVSLETSKGTSGPPVTMATDSLETSTGTTGPPVTMT 208
Query: 183 TESLKPLANRHATASKNIFREDPIIAMVLNATKVFKYESSENEQRRMFHATVATQTQFFH 242
T SL+P + ++ + + + + R M V
Sbjct: 209 TGSLEPSSGASGPQVSSVKLSTMMSPTTSTNASTVPFRNPDENSRGMLPVAVLVALLAVI 268
Query: 243 VKVLNINLKRKFIKKR--IIIISNYSKRNSLLEVNEASSVSEAGPDQTFE 290
V V + L R+ K+R +++S KRN +++ + AGP Q E
Sbjct: 269 VLVALLLLWRRRQKRRTGALVLSRGGKRNGVVD-------AWAGPAQVPE 311
>gi|50409691 SRp25 nuclear protein isoform 4 [Homo sapiens]
Length = 338
Score = 36.2 bits (82), Expect = 0.063
Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 3/83 (3%)
Query: 118 AKGAEETLGPQKRKKPSEEETGT---KRSKMSKEQTRPSCSAGASTSTAMGRSPPPQTSS 174
A+GA +G +KR + G KR K S++ T +CSA S + ++ SS
Sbjct: 120 ARGAMAHVGSRKRSRSRSRSRGRGSEKRKKKSRKDTSRNCSASTSQERSKQKARRRTRSS 179
Query: 175 SAPPNTSSTESLKPLANRHATAS 197
S+ ++SS+ S ++ +++S
Sbjct: 180 SSSSSSSSSSSSSSSSSSSSSSS 202
>gi|50409707 SRp25 nuclear protein isoform 2 [Homo sapiens]
Length = 341
Score = 36.2 bits (82), Expect = 0.063
Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 3/83 (3%)
Query: 118 AKGAEETLGPQKRKKPSEEETGT---KRSKMSKEQTRPSCSAGASTSTAMGRSPPPQTSS 174
A+GA +G +KR + G KR K S++ T +CSA S + ++ SS
Sbjct: 120 ARGAMAHVGSRKRSRSRSRSRGRGSEKRKKKSRKDTSRNCSASTSQERSKQKARRRTRSS 179
Query: 175 SAPPNTSSTESLKPLANRHATAS 197
S+ ++SS+ S ++ +++S
Sbjct: 180 SSSSSSSSSSSSSSSSSSSSSSS 202
>gi|238624188 diffuse panbronchiolitis critical region 1 protein
[Homo sapiens]
Length = 1393
Score = 35.8 bits (81), Expect = 0.082
Identities = 25/87 (28%), Positives = 36/87 (41%), Gaps = 2/87 (2%)
Query: 111 TPSNRLTAKGAEETLGPQKRKKPSEEETGTKRSKMSKEQTRPSCSAGASTSTAMGRSPPP 170
TPS + E T + P+E R+ ++ E+T PS + +
Sbjct: 534 TPSPAEPTENRERTANEKTTPSPAEPTENGDRTPLANEKTTPSLAEPTENGQRTPFANEK 593
Query: 171 QTSSSAPPNTSSTESLKPLANRHATAS 197
TSSSA P + E PLAN + T S
Sbjct: 594 TTSSSAEP--TEHEERTPLANENTTPS 618
Score = 34.7 bits (78), Expect = 0.18
Identities = 26/104 (25%), Positives = 43/104 (41%), Gaps = 3/104 (2%)
Query: 94 PSKKTKQKEVYPATPACTPSNRLTAKGAEETLGPQKRKKPSEEETGTKRSKMSKEQTRPS 153
P++ T+ +E A TP + E T P++ R+ ++ E+T PS
Sbjct: 718 PAEPTENRE-RTANEKTTPFPAEPTENRERTANENTTPSPAQPTENGDRTPLANEKTTPS 776
Query: 154 CSAGASTSTAMGRSPPPQTSSSAPPNTSSTESLKPLANRHATAS 197
+ + TSSSA P + + PLAN + T+S
Sbjct: 777 LAEPTENGKRTPFANEKTTSSSAEPTEHAERT--PLANENTTSS 818
Score = 30.0 bits (66), Expect = 4.5
Identities = 29/124 (23%), Positives = 43/124 (34%), Gaps = 19/124 (15%)
Query: 325 TKIVNRKTTIYEIQDKTGSMAVVGKGECHNIPCEKGDKLRLFCFRLRKRENMSKLMSEMH 384
+KI RK+T TG V K + P EK + K + H
Sbjct: 164 SKINCRKST-------TGKSTVTRKSDKTGRPLEKS------------MSTLDKTSTSSH 204
Query: 385 SFIQIQKNTNQRSHDSRSMALPQEQSQHPKPSEASTTLPESHLKTPQMPPTTPSSSSFTK 444
N+ +S + P++ + K + +T PE KT T S TK
Sbjct: 205 KTTTSFHNSGNSQTKQKSTSFPEKITAASKTTYKTTGTPEESEKTEDSRTTVASDKLLTK 264
Query: 445 VTKD 448
TK+
Sbjct: 265 TTKN 268
>gi|27436933 orthodenticle homeobox 2 isoform b [Homo sapiens]
Length = 289
Score = 35.4 bits (80), Expect = 0.11
Identities = 21/84 (25%), Positives = 45/84 (53%), Gaps = 6/84 (7%)
Query: 129 KRKKPSEEETGTKRSKMSKEQTRPSCSAGASTSTAMGRSPPPQT------SSSAPPNTSS 182
++++ ++ G + + +K++T P+ + + T+ +PP T SSSAP + S
Sbjct: 94 RQQQQQQQNGGQNKVRPAKKKTSPAREVSSESGTSGQFTPPSSTSVPTIASSSAPVSIWS 153
Query: 183 TESLKPLANRHATASKNIFREDPI 206
S+ PL++ +T+S + R P+
Sbjct: 154 PASISPLSDPLSTSSSCMQRSYPM 177
>gi|11119420 orthodenticle homeobox 2 isoform a [Homo sapiens]
Length = 297
Score = 35.4 bits (80), Expect = 0.11
Identities = 21/84 (25%), Positives = 45/84 (53%), Gaps = 6/84 (7%)
Query: 129 KRKKPSEEETGTKRSKMSKEQTRPSCSAGASTSTAMGRSPPPQT------SSSAPPNTSS 182
++++ ++ G + + +K++T P+ + + T+ +PP T SSSAP + S
Sbjct: 102 RQQQQQQQNGGQNKVRPAKKKTSPAREVSSESGTSGQFTPPSSTSVPTIASSSAPVSIWS 161
Query: 183 TESLKPLANRHATASKNIFREDPI 206
S+ PL++ +T+S + R P+
Sbjct: 162 PASISPLSDPLSTSSSCMQRSYPM 185
>gi|115298682 HBxAg transactivated protein 2 [Homo sapiens]
Length = 2817
Score = 35.4 bits (80), Expect = 0.11
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 83 KREKLKVKGIIPSKKTKQKEVYPATPACTPSNRLTAKGAEETLGPQKRKKPSEEETGTKR 142
K EK+ K ++ +KT++K++ P P P + + + P+ K PS ET T
Sbjct: 1038 KAEKVTEKVVVKPEKTEKKDLPPPPPPPQPPAPIQPQSVPPPIQPEAEKFPS-TETATLA 1096
Query: 143 SKMSKEQTRP 152
K S++ +P
Sbjct: 1097 QKPSQDTEKP 1106
>gi|13259510 dynactin 1 isoform 1 [Homo sapiens]
Length = 1278
Score = 35.0 bits (79), Expect = 0.14
Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 5/90 (5%)
Query: 105 PATPACTPSNRLTAKGAEETLGPQKRK--KPSEEETGTKRSKMSKEQTRPSCSAGASTST 162
P TP + S L +G + T K + KP + T K + + TRP+ + A S+
Sbjct: 106 PETPDSSASKVLKREGTDTTAKTSKLRGLKPKKAPTARKTTTRRPKPTRPASTGVAGASS 165
Query: 163 AMGRS---PPPQTSSSAPPNTSSTESLKPL 189
++G S + SSS P + T P+
Sbjct: 166 SLGPSGSASAGELSSSEPSTPAQTPLAAPI 195
>gi|121114302 cullin 4B isoform 2 [Homo sapiens]
Length = 895
Score = 35.0 bits (79), Expect = 0.14
Identities = 48/202 (23%), Positives = 75/202 (37%), Gaps = 23/202 (11%)
Query: 105 PATPACTPSNRLTAKGAEETLGPQKRKKPSEEETGTKRSKMSKEQTRPSCSAGASTSTAM 164
P+ A R G T P KK + + S S E+ S +S+ST
Sbjct: 11 PSAAAAAQEVRSATDGNTSTTPPTSAKKRKLNSSSSSSSNSSNER-EDFDSTSSSSST-- 67
Query: 165 GRSPPPQTSSSAPPNTSS-TESLKPLANRHATASKNIFREDPIIAMVLNATKVFKYESSE 223
PP Q SA P+TSS + A+ H K + ED + + +A + SS
Sbjct: 68 ---PPLQPRDSASPSTSSFCLGVSVAASSHVPIQKKLRFEDTLEFVGFDAKMAEESSSSS 124
Query: 224 NEQRRMFHATVATQTQFFHVKVLNINLKRKFIKKRIIIISNYSKRNSLLEVNEASSVSEA 283
+ T AT Q ++ K I+I S S ++ +++VS
Sbjct: 125 SSS----SPTAATSQQ------------QQLKNKSILISSVASVHHANGLAKSSTTVSSF 168
Query: 284 GPDQTFEVPKDIIRRAKKIPKI 305
+ K +I+ K PK+
Sbjct: 169 ANSKPGSAKKLVIKNFKDKPKL 190
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.128 0.353
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,965,506
Number of Sequences: 37866
Number of extensions: 778808
Number of successful extensions: 6203
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 81
Number of HSP's successfully gapped in prelim test: 195
Number of HSP's that attempted gapping in prelim test: 5440
Number of HSP's gapped (non-prelim): 890
length of query: 452
length of database: 18,247,518
effective HSP length: 106
effective length of query: 346
effective length of database: 14,233,722
effective search space: 4924867812
effective search space used: 4924867812
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.