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Search of human proteins with 41152091
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|41152091 zinc finger protein 644 isoform 2 [Homo sapiens]
(105 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|41152095 zinc finger protein 644 isoform 2 [Homo sapiens] 210 2e-55
gi|41152091 zinc finger protein 644 isoform 2 [Homo sapiens] 210 2e-55
gi|41152093 zinc finger protein 644 isoform 1 [Homo sapiens] 197 1e-51
gi|151301215 widely-interspaced zinc finger motifs [Homo sapiens] 59 8e-10
gi|58761535 zinc finger protein 518B [Homo sapiens] 34 0.028
gi|16579828 zinc finger protein 91 [Homo sapiens] 29 0.90
gi|57242807 zinc finger protein 518 [Homo sapiens] 28 1.5
gi|219555736 zinc finger protein 438 isoform b [Homo sapiens] 28 2.0
gi|219555734 zinc finger protein 438 isoform b [Homo sapiens] 28 2.0
gi|219555732 zinc finger protein 438 isoform c [Homo sapiens] 28 2.0
gi|219555729 zinc finger protein 438 isoform a [Homo sapiens] 28 2.0
gi|219555727 zinc finger protein 438 isoform a [Homo sapiens] 28 2.0
gi|219555725 zinc finger protein 438 isoform a [Homo sapiens] 28 2.0
gi|33300651 zinc finger protein 438 isoform a [Homo sapiens] 28 2.0
gi|45439359 triple functional domain (PTPRF interacting) [Homo s... 28 2.0
gi|211058421 zinc finger protein 844 [Homo sapiens] 28 2.0
gi|210031154 zinc finger protein 541 [Homo sapiens] 28 2.0
gi|19743569 TRAF interacting protein TANK isoform a [Homo sapiens] 27 3.4
gi|15559211 RE1-silencing transcription factor [Homo sapiens] 27 3.4
gi|62821787 COBL-like 1 [Homo sapiens] 27 3.4
gi|19743801 zinc finger protein 274 isoform c [Homo sapiens] 27 4.5
gi|7706507 zinc finger protein 274 isoform a [Homo sapiens] 27 4.5
gi|19743798 zinc finger protein 274 isoform b [Homo sapiens] 27 4.5
gi|239787787 kin of IRRE like 3 isoform 2 [Homo sapiens] 26 5.9
gi|26006461 kin of IRRE like 3 isoform 1 [Homo sapiens] 26 5.9
gi|40255145 zinc finger protein 555 [Homo sapiens] 26 5.9
gi|46397390 pogo transposable element with ZNF domain isoform 1 ... 26 7.7
gi|46397394 pogo transposable element with ZNF domain isoform 2 ... 26 7.7
gi|28626504 fermitin family homolog 3 short form [Homo sapiens] 26 7.7
gi|41281905 fermitin family homolog 3 long form [Homo sapiens] 26 7.7
>gi|41152095 zinc finger protein 644 isoform 2 [Homo sapiens]
Length = 105
Score = 210 bits (534), Expect = 2e-55
Identities = 105/105 (100%), Positives = 105/105 (100%)
Query: 1 MLIRQNLALDCKQKKSRSRSGSKKKMLTLPHGADEVYILRCRFCGLVFRGPLSVQEDWIK 60
MLIRQNLALDCKQKKSRSRSGSKKKMLTLPHGADEVYILRCRFCGLVFRGPLSVQEDWIK
Sbjct: 1 MLIRQNLALDCKQKKSRSRSGSKKKMLTLPHGADEVYILRCRFCGLVFRGPLSVQEDWIK 60
Query: 61 HLQRHIVNANLPRTGAGMVEVTSLLKKPASITETSFSLLMAEAAS 105
HLQRHIVNANLPRTGAGMVEVTSLLKKPASITETSFSLLMAEAAS
Sbjct: 61 HLQRHIVNANLPRTGAGMVEVTSLLKKPASITETSFSLLMAEAAS 105
>gi|41152091 zinc finger protein 644 isoform 2 [Homo sapiens]
Length = 105
Score = 210 bits (534), Expect = 2e-55
Identities = 105/105 (100%), Positives = 105/105 (100%)
Query: 1 MLIRQNLALDCKQKKSRSRSGSKKKMLTLPHGADEVYILRCRFCGLVFRGPLSVQEDWIK 60
MLIRQNLALDCKQKKSRSRSGSKKKMLTLPHGADEVYILRCRFCGLVFRGPLSVQEDWIK
Sbjct: 1 MLIRQNLALDCKQKKSRSRSGSKKKMLTLPHGADEVYILRCRFCGLVFRGPLSVQEDWIK 60
Query: 61 HLQRHIVNANLPRTGAGMVEVTSLLKKPASITETSFSLLMAEAAS 105
HLQRHIVNANLPRTGAGMVEVTSLLKKPASITETSFSLLMAEAAS
Sbjct: 61 HLQRHIVNANLPRTGAGMVEVTSLLKKPASITETSFSLLMAEAAS 105
>gi|41152093 zinc finger protein 644 isoform 1 [Homo sapiens]
Length = 1327
Score = 197 bits (502), Expect = 1e-51
Identities = 99/105 (94%), Positives = 101/105 (96%)
Query: 1 MLIRQNLALDCKQKKSRSRSGSKKKMLTLPHGADEVYILRCRFCGLVFRGPLSVQEDWIK 60
M + + ALDCKQKKSRSRSGSKKKMLTLPHGADEVYILRCRFCGLVFRGPLSVQEDWIK
Sbjct: 1223 MDLTMHSALDCKQKKSRSRSGSKKKMLTLPHGADEVYILRCRFCGLVFRGPLSVQEDWIK 1282
Query: 61 HLQRHIVNANLPRTGAGMVEVTSLLKKPASITETSFSLLMAEAAS 105
HLQRHIVNANLPRTGAGMVEVTSLLKKPASITETSFSLLMAEAAS
Sbjct: 1283 HLQRHIVNANLPRTGAGMVEVTSLLKKPASITETSFSLLMAEAAS 1327
>gi|151301215 widely-interspaced zinc finger motifs [Homo sapiens]
Length = 794
Score = 58.9 bits (141), Expect = 8e-10
Identities = 21/38 (55%), Positives = 31/38 (81%)
Query: 36 VYILRCRFCGLVFRGPLSVQEDWIKHLQRHIVNANLPR 73
+Y L+CRFC + F+GPLS+QE+W++HLQRHI+ N +
Sbjct: 736 IYTLKCRFCEVEFQGPLSIQEEWVRHLQRHILEMNFSK 773
>gi|58761535 zinc finger protein 518B [Homo sapiens]
Length = 1074
Score = 33.9 bits (76), Expect = 0.028
Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
Query: 12 KQKKSRSRSGSKKKMLTLPHGADEVYILRCRFCGLVFRGPLSVQEDWIKHLQRHIVNA 69
K K + + + + +LP + + + +C FCG ++ QE+W+ H QRH++ A
Sbjct: 1010 KMKLKKVHKNNYQVVDSLPDDSSQC-VFKCWFCGRLYED----QEEWMSHGQRHLIEA 1062
>gi|16579828 zinc finger protein 91 [Homo sapiens]
Length = 570
Score = 28.9 bits (63), Expect = 0.90
Identities = 26/86 (30%), Positives = 32/86 (37%), Gaps = 8/86 (9%)
Query: 11 CKQKKSRSRSGSKKKMLTLPHGADEVYILRCRFCGLVFRGPLSVQEDWIK-HLQRHIVNA 69
C+QK S + K H AD Y C CG F SV K H + I A
Sbjct: 409 CRQKASLNWHMKK-------HDADSFYQFSCNICGKKFEKKDSVVAHKAKSHPEVLIAEA 461
Query: 70 NLPRTGAGMVEVTSLLKKPASITETS 95
GA + L P S+T+ S
Sbjct: 462 LAANAGALITSTDILGTNPESLTQPS 487
>gi|57242807 zinc finger protein 518 [Homo sapiens]
Length = 1483
Score = 28.1 bits (61), Expect = 1.5
Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 4/29 (13%)
Query: 41 CRFCGLVFRGPLSVQEDWIKHLQRHIVNA 69
C FCG VF Q+ W H QRH++ A
Sbjct: 1451 CWFCGRVFDN----QDTWAGHGQRHLMEA 1475
>gi|219555736 zinc finger protein 438 isoform b [Homo sapiens]
Length = 818
Score = 27.7 bits (60), Expect = 2.0
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 14 KKSRSRSGSKKKMLTLPHGADEV-YILRCRFCGLVFRGPLSVQEDWIKHLQRHIVN 68
+KS R GS + L HG + + ++ C FC VF G + V +K + R +++
Sbjct: 531 RKSYVRPGSLSTHMKLHHGENRLKKLMCCEFCAKVF-GHIRVYFGHLKEVHRVVIS 585
>gi|219555734 zinc finger protein 438 isoform b [Homo sapiens]
Length = 818
Score = 27.7 bits (60), Expect = 2.0
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 14 KKSRSRSGSKKKMLTLPHGADEV-YILRCRFCGLVFRGPLSVQEDWIKHLQRHIVN 68
+KS R GS + L HG + + ++ C FC VF G + V +K + R +++
Sbjct: 531 RKSYVRPGSLSTHMKLHHGENRLKKLMCCEFCAKVF-GHIRVYFGHLKEVHRVVIS 585
>gi|219555732 zinc finger protein 438 isoform c [Homo sapiens]
Length = 779
Score = 27.7 bits (60), Expect = 2.0
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 14 KKSRSRSGSKKKMLTLPHGADEV-YILRCRFCGLVFRGPLSVQEDWIKHLQRHIVN 68
+KS R GS + L HG + + ++ C FC VF G + V +K + R +++
Sbjct: 492 RKSYVRPGSLSTHMKLHHGENRLKKLMCCEFCAKVF-GHIRVYFGHLKEVHRVVIS 546
>gi|219555729 zinc finger protein 438 isoform a [Homo sapiens]
Length = 828
Score = 27.7 bits (60), Expect = 2.0
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 14 KKSRSRSGSKKKMLTLPHGADEV-YILRCRFCGLVFRGPLSVQEDWIKHLQRHIVN 68
+KS R GS + L HG + + ++ C FC VF G + V +K + R +++
Sbjct: 541 RKSYVRPGSLSTHMKLHHGENRLKKLMCCEFCAKVF-GHIRVYFGHLKEVHRVVIS 595
>gi|219555727 zinc finger protein 438 isoform a [Homo sapiens]
Length = 828
Score = 27.7 bits (60), Expect = 2.0
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 14 KKSRSRSGSKKKMLTLPHGADEV-YILRCRFCGLVFRGPLSVQEDWIKHLQRHIVN 68
+KS R GS + L HG + + ++ C FC VF G + V +K + R +++
Sbjct: 541 RKSYVRPGSLSTHMKLHHGENRLKKLMCCEFCAKVF-GHIRVYFGHLKEVHRVVIS 595
>gi|219555725 zinc finger protein 438 isoform a [Homo sapiens]
Length = 828
Score = 27.7 bits (60), Expect = 2.0
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 14 KKSRSRSGSKKKMLTLPHGADEV-YILRCRFCGLVFRGPLSVQEDWIKHLQRHIVN 68
+KS R GS + L HG + + ++ C FC VF G + V +K + R +++
Sbjct: 541 RKSYVRPGSLSTHMKLHHGENRLKKLMCCEFCAKVF-GHIRVYFGHLKEVHRVVIS 595
>gi|33300651 zinc finger protein 438 isoform a [Homo sapiens]
Length = 828
Score = 27.7 bits (60), Expect = 2.0
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 14 KKSRSRSGSKKKMLTLPHGADEV-YILRCRFCGLVFRGPLSVQEDWIKHLQRHIVN 68
+KS R GS + L HG + + ++ C FC VF G + V +K + R +++
Sbjct: 541 RKSYVRPGSLSTHMKLHHGENRLKKLMCCEFCAKVF-GHIRVYFGHLKEVHRVVIS 595
>gi|45439359 triple functional domain (PTPRF interacting) [Homo
sapiens]
Length = 3097
Score = 27.7 bits (60), Expect = 2.0
Identities = 28/99 (28%), Positives = 40/99 (40%), Gaps = 21/99 (21%)
Query: 10 DCKQKKSRSRSGSKKKMLTLPHGADE-VYILRCRFCGLVFRGPLSV------------QE 56
+ K RS+ K K+ T G E V C+F V R P S ++
Sbjct: 1521 EVKDSSGRSKYLYKSKLFTSELGVTEHVEGDPCKFALWVGRTPTSDNKIVLKASSIENKQ 1580
Query: 57 DWIKHLQRHIVNANLPRTGAGMVEVTSLLKKPASITETS 95
DWIKH++ I + GA LK+P I +T+
Sbjct: 1581 DWIKHIREVIQERTIHLKGA--------LKEPIHIPKTA 1611
>gi|211058421 zinc finger protein 844 [Homo sapiens]
Length = 666
Score = 27.7 bits (60), Expect = 2.0
Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Query: 11 CKQKKSRSRSGSKKKMLTLPHGADEVYILRCRFCGLVFRGPLSVQEDWIKH 61
C+Q+K R +M H +++Y C+ CG F S+Q I H
Sbjct: 143 CQQRKKAFRCHPSFQMQEKAHTGEKLY--DCKECGKTFISHSSIQRHMIMH 191
>gi|210031154 zinc finger protein 541 [Homo sapiens]
Length = 1365
Score = 27.7 bits (60), Expect = 2.0
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 17 RSRSGSKKKMLTLPHGADEVYILRCRFCGLVFRGPLSVQEDWIKHLQ 63
R+ SGS +K H + + +L C CG VF S+ + ++ H Q
Sbjct: 119 RATSGSARKGKR-QHSSPQNPLLDCSLCGKVFSSASSLSKHYLTHSQ 164
>gi|19743569 TRAF interacting protein TANK isoform a [Homo sapiens]
Length = 425
Score = 26.9 bits (58), Expect = 3.4
Identities = 12/32 (37%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 35 EVYILR-CRFCGLVFRGPLSVQEDWIKHLQRH 65
E++I R C FC VF ++ + D+++HL H
Sbjct: 389 ELHIPRVCEFCQAVFPPSITSRGDFLRHLNSH 420
>gi|15559211 RE1-silencing transcription factor [Homo sapiens]
Length = 1097
Score = 26.9 bits (58), Expect = 3.4
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 8/51 (15%)
Query: 18 SRSGSKKKMLTLPHGADEVYILRCRFCGLVFRGPLSVQEDWIKHLQRHIVN 68
SR +K+ + D V C FC FR +D+ KHL RH+VN
Sbjct: 1043 SRKNAKEALAVKAAKGDFV----CIFCDRSFRKG----KDYSKHLNRHLVN 1085
>gi|62821787 COBL-like 1 [Homo sapiens]
Length = 1166
Score = 26.9 bits (58), Expect = 3.4
Identities = 19/61 (31%), Positives = 25/61 (40%), Gaps = 2/61 (3%)
Query: 28 TLPHGADEVYILRCRFCGLVFRGPLSVQEDWIKHLQRHIVNANLPRTGAGMVEVTSLLKK 87
T HG+ + L C P S D + Q HI P T GM+EV ++ K
Sbjct: 72 TTVHGSKPMMDLLIFLCAQYHLNPSSYTIDLLSAEQNHIKFK--PNTPIGMLEVEKVILK 129
Query: 88 P 88
P
Sbjct: 130 P 130
>gi|19743801 zinc finger protein 274 isoform c [Homo sapiens]
Length = 653
Score = 26.6 bits (57), Expect = 4.5
Identities = 13/47 (27%), Positives = 23/47 (48%), Gaps = 6/47 (12%)
Query: 11 CKQKKSRSRSGSKK------KMLTLPHGADEVYILRCRFCGLVFRGP 51
C+++K++ +G +K K +T + RC CG +FR P
Sbjct: 473 CERQKAKEGNGCRKTFSRSTKQITFIRIHKGSQVCRCSECGKIFRNP 519
>gi|7706507 zinc finger protein 274 isoform a [Homo sapiens]
Length = 621
Score = 26.6 bits (57), Expect = 4.5
Identities = 13/47 (27%), Positives = 23/47 (48%), Gaps = 6/47 (12%)
Query: 11 CKQKKSRSRSGSKK------KMLTLPHGADEVYILRCRFCGLVFRGP 51
C+++K++ +G +K K +T + RC CG +FR P
Sbjct: 441 CERQKAKEGNGCRKTFSRSTKQITFIRIHKGSQVCRCSECGKIFRNP 487
>gi|19743798 zinc finger protein 274 isoform b [Homo sapiens]
Length = 548
Score = 26.6 bits (57), Expect = 4.5
Identities = 13/47 (27%), Positives = 23/47 (48%), Gaps = 6/47 (12%)
Query: 11 CKQKKSRSRSGSKK------KMLTLPHGADEVYILRCRFCGLVFRGP 51
C+++K++ +G +K K +T + RC CG +FR P
Sbjct: 368 CERQKAKEGNGCRKTFSRSTKQITFIRIHKGSQVCRCSECGKIFRNP 414
>gi|239787787 kin of IRRE like 3 isoform 2 [Homo sapiens]
Length = 600
Score = 26.2 bits (56), Expect = 5.9
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 4/40 (10%)
Query: 55 QEDWIKHLQRHIVNANLPRTGAGMVEVTSLLKKPASITET 94
QED K++ R +V PR GAG EVT + P I+ T
Sbjct: 390 QEDAGKYVCRAVV----PRVGAGEREVTLTVNGPPIISST 425
>gi|26006461 kin of IRRE like 3 isoform 1 [Homo sapiens]
Length = 778
Score = 26.2 bits (56), Expect = 5.9
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 4/40 (10%)
Query: 55 QEDWIKHLQRHIVNANLPRTGAGMVEVTSLLKKPASITET 94
QED K++ R +V PR GAG EVT + P I+ T
Sbjct: 390 QEDAGKYVCRAVV----PRVGAGEREVTLTVNGPPIISST 425
>gi|40255145 zinc finger protein 555 [Homo sapiens]
Length = 628
Score = 26.2 bits (56), Expect = 5.9
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 8/57 (14%)
Query: 10 DCKQ-KKSRSRSGSKKKMLTLPHGADEVYILRCRFCGLVFRGPLSVQEDWIKHLQRH 65
+CKQ K+ S S ++ + + H D+ Y C+ CG F +S+Q KH++RH
Sbjct: 453 ECKQCGKAFSLSACFREHVRM-HPEDKSY--ECKLCGKAFYCHISLQ----KHMRRH 502
>gi|46397390 pogo transposable element with ZNF domain isoform 1
[Homo sapiens]
Length = 1410
Score = 25.8 bits (55), Expect = 7.7
Identities = 9/32 (28%), Positives = 20/32 (62%)
Query: 39 LRCRFCGLVFRGPLSVQEDWIKHLQRHIVNAN 70
L C +C VF+ + Q+ +++H +R++ + N
Sbjct: 619 LLCPYCLKVFKNGNAFQQHYMRHQKRNVYHCN 650
>gi|46397394 pogo transposable element with ZNF domain isoform 2
[Homo sapiens]
Length = 1357
Score = 25.8 bits (55), Expect = 7.7
Identities = 9/32 (28%), Positives = 20/32 (62%)
Query: 39 LRCRFCGLVFRGPLSVQEDWIKHLQRHIVNAN 70
L C +C VF+ + Q+ +++H +R++ + N
Sbjct: 566 LLCPYCLKVFKNGNAFQQHYMRHQKRNVYHCN 597
>gi|28626504 fermitin family homolog 3 short form [Homo sapiens]
Length = 663
Score = 25.8 bits (55), Expect = 7.7
Identities = 20/71 (28%), Positives = 30/71 (42%), Gaps = 14/71 (19%)
Query: 20 SGSK---KKMLTLPHGADEVYILRCRF----------CGLVFRGPLSVQEDWIKHLQRHI 66
SG K K ++ P G E+Y LRC+ C L +G + +Q +
Sbjct: 412 SGQKFCIKLLVPSPEGMSEIY-LRCQDEQQYARWMAGCRLASKGRTMADSSYTSEVQAIL 470
Query: 67 VNANLPRTGAG 77
+L RTG+G
Sbjct: 471 AFLSLQRTGSG 481
>gi|41281905 fermitin family homolog 3 long form [Homo sapiens]
Length = 667
Score = 25.8 bits (55), Expect = 7.7
Identities = 20/71 (28%), Positives = 30/71 (42%), Gaps = 14/71 (19%)
Query: 20 SGSK---KKMLTLPHGADEVYILRCRF----------CGLVFRGPLSVQEDWIKHLQRHI 66
SG K K ++ P G E+Y LRC+ C L +G + +Q +
Sbjct: 416 SGQKFCIKLLVPSPEGMSEIY-LRCQDEQQYARWMAGCRLASKGRTMADSSYTSEVQAIL 474
Query: 67 VNANLPRTGAG 77
+L RTG+G
Sbjct: 475 AFLSLQRTGSG 485
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.133 0.387
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,850,629
Number of Sequences: 37866
Number of extensions: 156117
Number of successful extensions: 396
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 380
Number of HSP's gapped (non-prelim): 40
length of query: 105
length of database: 18,247,518
effective HSP length: 76
effective length of query: 29
effective length of database: 15,369,702
effective search space: 445721358
effective search space used: 445721358
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.