Guide to the Human Genome
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Name: ZNF644 Sequence: fasta or formatted (105aa) NCBI GI: 41152091
Description:

zinc finger protein 644 isoform 2

Referenced in:

Kruppel-related Zinc Finger Proteins

Other entries for this name:
alt prot [1327aa] zinc finger protein 644 isoform 1
alt mRNA [105aa] zinc finger protein 644 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.6          8           2
 C cysteine            2.9          3           1
 D aspartate           2.9          3           1
 E glutamate           4.8          5           1
 F phenylalanine       2.9          3           1
 G glycine             5.7          6           1
 H histidine           2.9          3           1
 I isoleucine          4.8          5           1
 K lysine              8.6          9           3
 L leucine            13.3         14           2
 M methionine          3.8          4           1
 N asparagine          2.9          3           1
 P proline             3.8          4           1
 Q glutamine           3.8          4           1
 R arginine            7.6          8           1
 S serine              9.5         10           1
 T threonine           4.8          5           1
 V valine              5.7          6           1
 W tryptophan          1.0          1           1
 Y tyrosine            1.0          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 644 isoform 2 
ZNF644                1.000   zinc finger protein 644 isoform 2 
ZNF644                0.930   zinc finger protein 644 isoform 1 
WIZ                   0.184   widely-interspaced zinc finger motifs 
ZNF518B               0.049   zinc finger protein 518B 
ZFP91                 0.022   zinc finger protein 91 
ZNF518A               0.016   zinc finger protein 518 
ZNF438                0.016   zinc finger protein 438 isoform b 
ZNF438                0.016   zinc finger protein 438 isoform b 
ZNF438                0.016   zinc finger protein 438 isoform c 
ZNF438                0.016   zinc finger protein 438 isoform a 
ZNF438                0.016   zinc finger protein 438 isoform a 
ZNF438                0.016   zinc finger protein 438 isoform a 
ZNF438                0.016   zinc finger protein 438 isoform a 
TRIO                  0.016   triple functional domain (PTPRF interacting) 
ZNF844                0.016   zinc finger protein 844 
ZNF541                0.016   zinc finger protein 541 
TANK                  0.011   TRAF interacting protein TANK isoform a 
REST                  0.011   RE1-silencing transcription factor 
COBLL1                0.011   COBL-like 1 
ZNF274                0.011   zinc finger protein 274 isoform c 
ZNF274                0.011   zinc finger protein 274 isoform a 
ZNF274                0.011   zinc finger protein 274 isoform b 
KIRREL3               0.005   kin of IRRE like 3 isoform 2 
KIRREL3               0.005   kin of IRRE like 3 isoform 1 
ZNF555                0.005   zinc finger protein 555 
POGZ                  0.005   pogo transposable element with ZNF domain isoform 1 ...
POGZ                  0.005   pogo transposable element with ZNF domain isoform 2 ...
FERMT3                0.005   fermitin family homolog 3 short form 
FERMT3                0.005   fermitin family homolog 3 long form 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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