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Search of human proteins with 40556376
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|40556376 cytokine-like nuclear factor n-pac [Homo sapiens]
(553 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|40556376 cytokine-like nuclear factor n-pac [Homo sapiens] 1107 0.0
gi|23308751 3-hydroxyisobutyrate dehydrogenase [Homo sapiens] 110 4e-24
gi|7705320 hepatoma-derived growth factor, related protein 3 [Ho... 71 3e-12
gi|4758516 hepatoma-derived growth factor isoform a [Homo sapiens] 69 1e-11
gi|48255931 hepatoma-derived growth factor-related protein 2 iso... 57 4e-08
gi|14249158 hepatoma-derived growth factor-related protein 2 iso... 57 4e-08
gi|190014588 PC4 and SFRS1 interacting protein 1 isoform 2 [Homo... 56 1e-07
gi|190014586 PC4 and SFRS1 interacting protein 1 isoform 1 [Homo... 56 1e-07
gi|19923653 PC4 and SFRS1 interacting protein 1 isoform 2 [Homo ... 56 1e-07
gi|13699811 WHSC1L1 protein isoform long [Homo sapiens] 51 3e-06
gi|13699813 WHSC1L1 protein isoform short [Homo sapiens] 51 3e-06
gi|110681712 hepatoma derived growth factor-like 1 [Homo sapiens] 50 5e-06
gi|186928819 hepatoma-derived growth factor isoform b [Homo sapi... 49 2e-05
gi|186928821 hepatoma-derived growth factor isoform c [Homo sapi... 48 3e-05
gi|4504191 mutS homolog 6 [Homo sapiens] 47 5e-05
gi|42741684 zinc finger protein 265 isoform 1 [Homo sapiens] 46 8e-05
gi|42741682 zinc finger protein 265 isoform 2 [Homo sapiens] 46 8e-05
gi|19913358 Wolf-Hirschhorn syndrome candidate 1 protein isoform... 45 2e-04
gi|19913350 Wolf-Hirschhorn syndrome candidate 1 protein isoform... 45 2e-04
gi|19913348 Wolf-Hirschhorn syndrome candidate 1 protein isoform... 45 2e-04
gi|109633019 Wolf-Hirschhorn syndrome candidate 1 protein isofor... 45 2e-04
gi|27477095 nuclear receptor binding SET domain protein 1 isofor... 45 2e-04
gi|19923586 nuclear receptor binding SET domain protein 1 isofor... 45 2e-04
gi|89276756 serine/threonine-protein kinase PRP4K [Homo sapiens] 44 3e-04
gi|116812577 LUC7-like 2 [Homo sapiens] 44 5e-04
gi|117935038 cylicin, basic protein of sperm head cytoskeleton 1... 43 9e-04
gi|21040326 SON DNA-binding protein isoform F [Homo sapiens] 43 9e-04
gi|21040314 SON DNA-binding protein isoform B [Homo sapiens] 43 9e-04
gi|19913356 Wolf-Hirschhorn syndrome candidate 1 protein isoform... 42 0.002
gi|6594683 Wolf-Hirschhorn syndrome candidate 1 protein isoform ... 42 0.002
>gi|40556376 cytokine-like nuclear factor n-pac [Homo sapiens]
Length = 553
Score = 1107 bits (2863), Expect = 0.0
Identities = 553/553 (100%), Positives = 553/553 (100%)
Query: 1 MAAVSLRLGDLVWGKLGRYPPWPGKIVNPPKDLKKPRGKKCFFVKFFGTEDHAWIKVEQL 60
MAAVSLRLGDLVWGKLGRYPPWPGKIVNPPKDLKKPRGKKCFFVKFFGTEDHAWIKVEQL
Sbjct: 1 MAAVSLRLGDLVWGKLGRYPPWPGKIVNPPKDLKKPRGKKCFFVKFFGTEDHAWIKVEQL 60
Query: 61 KPYHAHKEEMIKINKGKRFQQAVDAVEEFLRRAKGKDQTSSHNSSDDKNRRNSSEERSRP 120
KPYHAHKEEMIKINKGKRFQQAVDAVEEFLRRAKGKDQTSSHNSSDDKNRRNSSEERSRP
Sbjct: 61 KPYHAHKEEMIKINKGKRFQQAVDAVEEFLRRAKGKDQTSSHNSSDDKNRRNSSEERSRP 120
Query: 121 NSGDEKRKLSLSEGKVKKNMGEGKKRVSSGSSERGSKSPLKRAQEQSPRKRGRPPKDEKD 180
NSGDEKRKLSLSEGKVKKNMGEGKKRVSSGSSERGSKSPLKRAQEQSPRKRGRPPKDEKD
Sbjct: 121 NSGDEKRKLSLSEGKVKKNMGEGKKRVSSGSSERGSKSPLKRAQEQSPRKRGRPPKDEKD 180
Query: 181 LTIPESSTVKGMMAGPMAAFKWQPTASEPVKDADPHFHHFLLSQTEKPAVCYQAITKKLK 240
LTIPESSTVKGMMAGPMAAFKWQPTASEPVKDADPHFHHFLLSQTEKPAVCYQAITKKLK
Sbjct: 181 LTIPESSTVKGMMAGPMAAFKWQPTASEPVKDADPHFHHFLLSQTEKPAVCYQAITKKLK 240
Query: 241 ICEEETGSTSIQAADSTAVNGSITPTDKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTA 300
ICEEETGSTSIQAADSTAVNGSITPTDKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTA
Sbjct: 241 ICEEETGSTSIQAADSTAVNGSITPTDKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTA 300
Query: 301 EKCDLFIQEGARLGRTPAEVVSTCDITFACVSDPKAAKDLVLGPSGVLQGIRPGKCYVDM 360
EKCDLFIQEGARLGRTPAEVVSTCDITFACVSDPKAAKDLVLGPSGVLQGIRPGKCYVDM
Sbjct: 301 EKCDLFIQEGARLGRTPAEVVSTCDITFACVSDPKAAKDLVLGPSGVLQGIRPGKCYVDM 360
Query: 361 STVDADTVTELAQVIVSRGGRFLEAPVSGNQQLSNDGMLVILAAGDRGLYEDCSSCFQAM 420
STVDADTVTELAQVIVSRGGRFLEAPVSGNQQLSNDGMLVILAAGDRGLYEDCSSCFQAM
Sbjct: 361 STVDADTVTELAQVIVSRGGRFLEAPVSGNQQLSNDGMLVILAAGDRGLYEDCSSCFQAM 420
Query: 421 GKTSFFLGEVGNAAKMMLIVNMVQGSFMATIAEGLTLAQVTGQSQQTLLDILNQGQLASI 480
GKTSFFLGEVGNAAKMMLIVNMVQGSFMATIAEGLTLAQVTGQSQQTLLDILNQGQLASI
Sbjct: 421 GKTSFFLGEVGNAAKMMLIVNMVQGSFMATIAEGLTLAQVTGQSQQTLLDILNQGQLASI 480
Query: 481 FLDQKCQNILQGNFKPDFYLKYIQKDLRLAIALGDAVNHPTPMAAAANEVYKRAKALDQS 540
FLDQKCQNILQGNFKPDFYLKYIQKDLRLAIALGDAVNHPTPMAAAANEVYKRAKALDQS
Sbjct: 481 FLDQKCQNILQGNFKPDFYLKYIQKDLRLAIALGDAVNHPTPMAAAANEVYKRAKALDQS 540
Query: 541 DNDMSAVYRAYIH 553
DNDMSAVYRAYIH
Sbjct: 541 DNDMSAVYRAYIH 553
>gi|23308751 3-hydroxyisobutyrate dehydrogenase [Homo sapiens]
Length = 336
Score = 110 bits (274), Expect = 4e-24
Identities = 77/304 (25%), Positives = 130/304 (42%), Gaps = 7/304 (2%)
Query: 253 AADSTAVNGSITPTDKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAEKCDLFIQEGAR 312
A AV + +GF+GLG MG+ + NL+K G+ + +++ + C F G +
Sbjct: 25 AGSFAAVCSRSVASKTPVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFPDACKEFQDAGEQ 84
Query: 313 LGRTPAEVVSTCDITFACVSDPKAAKDLVLGPSGVLQGIRPGKCYVDMSTVDADTVTELA 372
+ +PA+V D + A + G +G+L+ ++ G +D ST+D ELA
Sbjct: 85 VVSSPADVAEKADRIITMLPTSINAIEAYSGANGILKKVKKGSLLIDSSTIDPAVSKELA 144
Query: 373 QVIVSRGGRFLEAPVSGNQQLSNDGMLVILAAGDRGLYEDCSSCFQAMGKTSFFLGEVGN 432
+ + G F++APVSG + G L + G + MG + G VG
Sbjct: 145 KEVEKMGAVFMDAPVSGGVGAARSGNLTFMVGGVEDEFAAAQELLGCMGSNVVYCGAVGT 204
Query: 433 AAKMMLIVNMVQGSFMATIAEGLTLAQVTGQSQQTLLDILN--QGQLASIFLDQKCQNIL 490
+ NM+ M AE + L G + L ILN G+ S ++
Sbjct: 205 GQAAKICNNMLLAISMIGTAEAMNLGIRLGLDPKLLAKILNMSSGRCWSSDTYNPVPGVM 264
Query: 491 QG-----NFKPDFYLKYIQKDLRLAIALGDAVNHPTPMAAAANEVYKRAKALDQSDNDMS 545
G N++ F + KDL LA + P + + A+++Y+ A S D S
Sbjct: 265 DGVPSANNYQGGFGTTLMAKDLGLAQDSATSTKSPILLGSLAHQIYRMMCAKGYSKKDFS 324
Query: 546 AVYR 549
+V++
Sbjct: 325 SVFQ 328
>gi|7705320 hepatoma-derived growth factor, related protein 3 [Homo
sapiens]
Length = 203
Score = 70.9 bits (172), Expect = 3e-12
Identities = 55/195 (28%), Positives = 92/195 (47%), Gaps = 24/195 (12%)
Query: 7 RLGDLVWGKLGRYPPWPGKIVNPPKDLKKPRGKKCFFVKFFGTEDHAWIKVEQLKPYHAH 66
+ GDLV+ K+ YP WP +I P+ KP K + + FFGT + A++ + L PY +
Sbjct: 10 KAGDLVFAKMKGYPHWPARIDELPEGAVKPPANK-YPIFFFGTHETAFLGPKDLFPYKEY 68
Query: 67 KEEMIKINKGKRFQQAVDAVE-----EFLRRAKGKDQTSSHNSSDDKNRRNSSEERSRPN 121
K++ K NK K F + + +E +F + Q+SS + N ++S E
Sbjct: 69 KDKFGKSNKRKGFNEGLWEIENNPGVKFTGYQAIQQQSSSETEGEGGNTADASSE----- 123
Query: 122 SGDEKRKLSLSEGKVKKNMGEGKKRVSSGSSERGSKSPLKRAQEQSPRKRGRPPKDEKDL 181
EG + G+GK++ S+R K++ +QS + G +D+KD
Sbjct: 124 ----------EEGDRVEEDGKGKRKNEKAGSKRKKSYTSKKSSKQSRKSPG--DEDDKDC 171
Query: 182 TIPES-STVKGMMAG 195
E+ S+ +G AG
Sbjct: 172 KEEENKSSSEGGDAG 186
>gi|4758516 hepatoma-derived growth factor isoform a [Homo sapiens]
Length = 240
Score = 68.9 bits (167), Expect = 1e-11
Identities = 64/215 (29%), Positives = 94/215 (43%), Gaps = 21/215 (9%)
Query: 7 RLGDLVWGKLGRYPPWPGKIVNPPKDLKKPRGKKCFFVKFFGTEDHAWIKVEQLKPYHAH 66
+ GDLV+ K+ YP WP +I P+ K K + V FFGT + A++ + L PY
Sbjct: 11 KCGDLVFAKMKGYPHWPARIDEMPEAAVKSTANK-YQVFFFGTHETAFLGPKDLFPYEES 69
Query: 67 KEEMIKINKGKRFQQAVDAVEEFLRRAKGKDQTSSHNSSDDKNRRNSSEERSRPNSGDEK 126
KE+ K NK K F + + +E + S + SS K+ E GD
Sbjct: 70 KEKFGKPNKRKGFSEGLWEIEN-----NPTVKASGYQSSQKKSCVEEPEPEPEAAEGDGD 124
Query: 127 RKLSLSEGKVKKNMGEGKKRVSSGSSERGSKSPLKRAQ----EQSPR--KRGRPPKDEKD 180
+K +EG + EGK + + E+ K LKR E SP+ K P+ E+
Sbjct: 125 KK-GNAEGSSDE---EGKLVIDEPAKEKNEKGALKRRAGDLLEDSPKRPKEAENPEGEE- 179
Query: 181 LTIPESSTVKGMMAGPMAAFKWQPTASEPVKDADP 215
E++T++ PM K T SEP P
Sbjct: 180 ---KEAATLEVERPLPMEVEK-NSTPSEPGSGRGP 210
>gi|48255931 hepatoma-derived growth factor-related protein 2
isoform 1 [Homo sapiens]
Length = 671
Score = 57.0 bits (136), Expect = 4e-08
Identities = 60/241 (24%), Positives = 98/241 (40%), Gaps = 44/241 (18%)
Query: 9 GDLVWGKLGRYPPWPGKIVNPPKDLKKPRGKKCFFVKFFGTEDHAWIKVEQLKPYHAHKE 68
GDLV+ K+ YP WP +I + KP K + + FFGT + A++ + L PY K+
Sbjct: 8 GDLVFAKMKGYPHWPARIDDIADGAVKPPPNK-YPIFFFGTHETAFLGPKDLFPYDKCKD 66
Query: 69 EMIKINKGKRFQQAV---------------------------------DAVEEFLRRAKG 95
+ K NK K F + + DA E+ R
Sbjct: 67 KYGKPNKRKGFNEGLWEIQNNPHASYSAPPPVSSSDSEAPEANPADGSDADEDDEDRGVM 126
Query: 96 KDQTSSHNSSDDKNRRNSSEERSRPNSGDEKRKLSLSEGKVKKNMGEGKKRVSSGSSERG 155
+ ++ D+ +S ++S NSG KRK + V K + R +S ++
Sbjct: 127 AVTAVTATAASDRMESDSDSDKSSDNSG-LKRKTPALKMSVSK-----RARKASSDLDQA 180
Query: 156 SKSPLKRAQEQSPRKRGRPPKDEKDLTIPESSTVKGMMAGPMAAFKWQ--PTASEPVKDA 213
S SP + +E S ++D T + + V+ GP+ K + P+AS+ A
Sbjct: 181 SVSPSE--EENSESSSESEKTSDQDFTPEKKAAVRAPRRGPLGGRKKKKAPSASDSDSKA 238
Query: 214 D 214
D
Sbjct: 239 D 239
Score = 30.4 bits (67), Expect = 4.4
Identities = 34/148 (22%), Positives = 61/148 (41%), Gaps = 29/148 (19%)
Query: 67 KEEMIKINKGKRFQQAVDAVEEFLRRAKGKDQTSSHNSSDDKNRRNSSEE--------RS 118
K +K++ KR ++A +++ ++ + S + S+ + ++ + E R
Sbjct: 158 KTPALKMSVSKRARKASSDLDQASVSPSEEENSESSSESEKTSDQDFTPEKKAAVRAPRR 217
Query: 119 RPNSGDEKRKLSLSEGKVKKNMGEGKK-------RVSSGSSERGSKSPL----------- 160
P G +K+K + K +G K R +S SS S S
Sbjct: 218 GPLGGRKKKKAPSASDSDSKADSDGAKPEPVAMARSASSSSSSSSSSDSDVSVKKPPRGR 277
Query: 161 KRAQEQSPRKRGRPPKDEKDLTIPESST 188
K A++ P+ RGR PK E+ P SS+
Sbjct: 278 KPAEKPLPKPRGRKPKPERP---PSSSS 302
Score = 30.4 bits (67), Expect = 4.4
Identities = 31/129 (24%), Positives = 52/129 (40%), Gaps = 13/129 (10%)
Query: 83 VDAVEEFLRRAKGKDQTSSHNSSDDKNRRNSSEERSRPNSGDEKRKLSLSEGKVKKNMGE 142
VD + E+ RR + + + + RR EE R EK + + + E
Sbjct: 310 VDRISEWKRRDEARRREL------EARRRREQEEELRRLREQEKEEKERRRERADRGEAE 363
Query: 143 GKKRVSSGSSERGSKSPLKRAQEQSPRKRGRPPKDEKDLTIPESSTVKGMMAGPMAAFKW 202
SSG R P+K+ + + RGR P D + PE+ + +A K
Sbjct: 364 RGSGGSSGDELREDDEPVKK---RGRKGRGRGPPSSSD-SEPEAELER---EAKKSAKKP 416
Query: 203 QPTASEPVK 211
Q +++EP +
Sbjct: 417 QSSSTEPAR 425
>gi|14249158 hepatoma-derived growth factor-related protein 2
isoform 2 [Homo sapiens]
Length = 670
Score = 57.0 bits (136), Expect = 4e-08
Identities = 60/241 (24%), Positives = 98/241 (40%), Gaps = 44/241 (18%)
Query: 9 GDLVWGKLGRYPPWPGKIVNPPKDLKKPRGKKCFFVKFFGTEDHAWIKVEQLKPYHAHKE 68
GDLV+ K+ YP WP +I + KP K + + FFGT + A++ + L PY K+
Sbjct: 8 GDLVFAKMKGYPHWPARIDDIADGAVKPPPNK-YPIFFFGTHETAFLGPKDLFPYDKCKD 66
Query: 69 EMIKINKGKRFQQAV---------------------------------DAVEEFLRRAKG 95
+ K NK K F + + DA E+ R
Sbjct: 67 KYGKPNKRKGFNEGLWEIQNNPHASYSAPPPVSSSDSEAPEANPADGSDADEDDEDRGVM 126
Query: 96 KDQTSSHNSSDDKNRRNSSEERSRPNSGDEKRKLSLSEGKVKKNMGEGKKRVSSGSSERG 155
+ ++ D+ +S ++S NSG KRK + V K + R +S ++
Sbjct: 127 AVTAVTATAASDRMESDSDSDKSSDNSG-LKRKTPALKMSVSK-----RARKASSDLDQA 180
Query: 156 SKSPLKRAQEQSPRKRGRPPKDEKDLTIPESSTVKGMMAGPMAAFKWQ--PTASEPVKDA 213
S SP + +E S ++D T + + V+ GP+ K + P+AS+ A
Sbjct: 181 SVSPSE--EENSESSSESEKTSDQDFTPEKKAAVRAPRRGPLGGRKKKKAPSASDSDSKA 238
Query: 214 D 214
D
Sbjct: 239 D 239
Score = 30.4 bits (67), Expect = 4.4
Identities = 34/148 (22%), Positives = 61/148 (41%), Gaps = 29/148 (19%)
Query: 67 KEEMIKINKGKRFQQAVDAVEEFLRRAKGKDQTSSHNSSDDKNRRNSSEE--------RS 118
K +K++ KR ++A +++ ++ + S + S+ + ++ + E R
Sbjct: 158 KTPALKMSVSKRARKASSDLDQASVSPSEEENSESSSESEKTSDQDFTPEKKAAVRAPRR 217
Query: 119 RPNSGDEKRKLSLSEGKVKKNMGEGKK-------RVSSGSSERGSKSPL----------- 160
P G +K+K + K +G K R +S SS S S
Sbjct: 218 GPLGGRKKKKAPSASDSDSKADSDGAKPEPVAMARSASSSSSSSSSSDSDVSVKKPPRGR 277
Query: 161 KRAQEQSPRKRGRPPKDEKDLTIPESST 188
K A++ P+ RGR PK E+ P SS+
Sbjct: 278 KPAEKPLPKPRGRKPKPERP---PSSSS 302
Score = 30.4 bits (67), Expect = 4.4
Identities = 31/129 (24%), Positives = 52/129 (40%), Gaps = 13/129 (10%)
Query: 83 VDAVEEFLRRAKGKDQTSSHNSSDDKNRRNSSEERSRPNSGDEKRKLSLSEGKVKKNMGE 142
VD + E+ RR + + + + RR EE R EK + + + E
Sbjct: 310 VDRISEWKRRDEARRREL------EARRRREQEEELRRLREQEKEEKERRRERADRGEAE 363
Query: 143 GKKRVSSGSSERGSKSPLKRAQEQSPRKRGRPPKDEKDLTIPESSTVKGMMAGPMAAFKW 202
SSG R P+K+ + + RGR P D + PE+ + +A K
Sbjct: 364 RGSGGSSGDELREDDEPVKK---RGRKGRGRGPPSSSD-SEPEAELER---EAKKSAKKP 416
Query: 203 QPTASEPVK 211
Q +++EP +
Sbjct: 417 QSSSTEPAR 425
>gi|190014588 PC4 and SFRS1 interacting protein 1 isoform 2 [Homo
sapiens]
Length = 530
Score = 55.8 bits (133), Expect = 1e-07
Identities = 48/188 (25%), Positives = 81/188 (43%), Gaps = 14/188 (7%)
Query: 9 GDLVWGKLGRYPPWPGKIVNPPKDLKKPRGKKCFFVKFFGTEDHAWIKVEQLKPYHAHKE 68
GDL++ K+ YP WP ++ P KP K + FFGT + A++ + + PY +KE
Sbjct: 8 GDLIFAKMKGYPHWPARVDEVPDGAVKPPTNK-LPIFFFGTHETAFLGPKDIFPYSENKE 66
Query: 69 EMIKINKGKRFQQAVDAVEE--FLRRAKGKDQTSSHNSSDDKNRRNSSEERSRPNSGDEK 126
+ K NK K F + + ++ ++ + + T N+S D S+ ++ E+
Sbjct: 67 KYGKPNKRKGFNEGLWEIDNNPKVKFSSQQAATKQSNASSDVEVEEKETSVSKEDTDHEE 126
Query: 127 RKLSLSEGK-----VKKNMGEGKKRVSSGSSERGSKSPLKRAQ-----EQSPRKRGRPPK 176
+ + K K G+KR + E + A + SP KRGRP
Sbjct: 127 KASNEDVTKAVDITTPKAARRGRKRKAEKQVETEEAGVVTTATASVNLKVSP-KRGRPAA 185
Query: 177 DEKDLTIP 184
E + P
Sbjct: 186 TEVKIPKP 193
>gi|190014586 PC4 and SFRS1 interacting protein 1 isoform 1 [Homo
sapiens]
Length = 333
Score = 55.8 bits (133), Expect = 1e-07
Identities = 48/188 (25%), Positives = 81/188 (43%), Gaps = 14/188 (7%)
Query: 9 GDLVWGKLGRYPPWPGKIVNPPKDLKKPRGKKCFFVKFFGTEDHAWIKVEQLKPYHAHKE 68
GDL++ K+ YP WP ++ P KP K + FFGT + A++ + + PY +KE
Sbjct: 8 GDLIFAKMKGYPHWPARVDEVPDGAVKPPTNK-LPIFFFGTHETAFLGPKDIFPYSENKE 66
Query: 69 EMIKINKGKRFQQAVDAVEE--FLRRAKGKDQTSSHNSSDDKNRRNSSEERSRPNSGDEK 126
+ K NK K F + + ++ ++ + + T N+S D S+ ++ E+
Sbjct: 67 KYGKPNKRKGFNEGLWEIDNNPKVKFSSQQAATKQSNASSDVEVEEKETSVSKEDTDHEE 126
Query: 127 RKLSLSEGK-----VKKNMGEGKKRVSSGSSERGSKSPLKRAQ-----EQSPRKRGRPPK 176
+ + K K G+KR + E + A + SP KRGRP
Sbjct: 127 KASNEDVTKAVDITTPKAARRGRKRKAEKQVETEEAGVVTTATASVNLKVSP-KRGRPAA 185
Query: 177 DEKDLTIP 184
E + P
Sbjct: 186 TEVKIPKP 193
>gi|19923653 PC4 and SFRS1 interacting protein 1 isoform 2 [Homo
sapiens]
Length = 530
Score = 55.8 bits (133), Expect = 1e-07
Identities = 48/188 (25%), Positives = 81/188 (43%), Gaps = 14/188 (7%)
Query: 9 GDLVWGKLGRYPPWPGKIVNPPKDLKKPRGKKCFFVKFFGTEDHAWIKVEQLKPYHAHKE 68
GDL++ K+ YP WP ++ P KP K + FFGT + A++ + + PY +KE
Sbjct: 8 GDLIFAKMKGYPHWPARVDEVPDGAVKPPTNK-LPIFFFGTHETAFLGPKDIFPYSENKE 66
Query: 69 EMIKINKGKRFQQAVDAVEE--FLRRAKGKDQTSSHNSSDDKNRRNSSEERSRPNSGDEK 126
+ K NK K F + + ++ ++ + + T N+S D S+ ++ E+
Sbjct: 67 KYGKPNKRKGFNEGLWEIDNNPKVKFSSQQAATKQSNASSDVEVEEKETSVSKEDTDHEE 126
Query: 127 RKLSLSEGK-----VKKNMGEGKKRVSSGSSERGSKSPLKRAQ-----EQSPRKRGRPPK 176
+ + K K G+KR + E + A + SP KRGRP
Sbjct: 127 KASNEDVTKAVDITTPKAARRGRKRKAEKQVETEEAGVVTTATASVNLKVSP-KRGRPAA 185
Query: 177 DEKDLTIP 184
E + P
Sbjct: 186 TEVKIPKP 193
>gi|13699811 WHSC1L1 protein isoform long [Homo sapiens]
Length = 1437
Score = 50.8 bits (120), Expect = 3e-06
Identities = 33/125 (26%), Positives = 57/125 (45%), Gaps = 24/125 (19%)
Query: 4 VSLRLGDLVWGKLGRYPPWPGKIVNPPK----DLKKPRGKKCFFVKFFGTE-DHAWIKVE 58
V ++GDLVW K+G YP WP + + P+ RG + + V+FF + + AW+ +
Sbjct: 266 VKFQVGDLVWSKVGTYPWWPCMVSSDPQLEVHTKINTRGAREYHVQFFSNQPERAWVHEK 325
Query: 59 QLKPYHAHKEEMIKINKGKRFQQAVDAVEEFLRRAKGKDQTSSHNSSDDKNRRNSSEERS 118
+++ Y HK+ EE L A+ Q S+H+ + ER+
Sbjct: 326 RVREYKGHKQ-----------------YEELL--AEATKQASNHSEKQKIRKPRPQRERA 366
Query: 119 RPNSG 123
+ + G
Sbjct: 367 QWDIG 371
Score = 44.7 bits (104), Expect = 2e-04
Identities = 33/114 (28%), Positives = 49/114 (42%), Gaps = 10/114 (8%)
Query: 2 AAVSLRLGDLVWGKLGRYPPWPGKIVNPPKDLKKPRGKK----CFFVKFFGTEDHAWIKV 57
A L +VW KLG Y WP +I NP +G K F V FFG+ D+ W+
Sbjct: 954 AGKKLHYKQIVWVKLGNYRWWPAEICNPRSVPLNIQGLKHDLGDFPVFFFGSHDYYWVHQ 1013
Query: 58 EQLKPY----HAHKEEMIKINK--GKRFQQAVDAVEEFLRRAKGKDQTSSHNSS 105
++ PY + E INK K ++A +E + + K+ +S
Sbjct: 1014 GRVFPYVEGDKSFAEGQTSINKTFKKALEEAAKRFQELKAQRESKEALEIEKNS 1067
>gi|13699813 WHSC1L1 protein isoform short [Homo sapiens]
Length = 645
Score = 50.8 bits (120), Expect = 3e-06
Identities = 33/125 (26%), Positives = 57/125 (45%), Gaps = 24/125 (19%)
Query: 4 VSLRLGDLVWGKLGRYPPWPGKIVNPPK----DLKKPRGKKCFFVKFFGTE-DHAWIKVE 58
V ++GDLVW K+G YP WP + + P+ RG + + V+FF + + AW+ +
Sbjct: 266 VKFQVGDLVWSKVGTYPWWPCMVSSDPQLEVHTKINTRGAREYHVQFFSNQPERAWVHEK 325
Query: 59 QLKPYHAHKEEMIKINKGKRFQQAVDAVEEFLRRAKGKDQTSSHNSSDDKNRRNSSEERS 118
+++ Y HK+ EE L A+ Q S+H+ + ER+
Sbjct: 326 RVREYKGHKQ-----------------YEELL--AEATKQASNHSEKQKIRKPRPQRERA 366
Query: 119 RPNSG 123
+ + G
Sbjct: 367 QWDIG 371
>gi|110681712 hepatoma derived growth factor-like 1 [Homo sapiens]
Length = 251
Score = 50.1 bits (118), Expect = 5e-06
Identities = 43/169 (25%), Positives = 67/169 (39%), Gaps = 18/169 (10%)
Query: 9 GDLVWGKLGRYPPWPGKIVNPPKDLKKPRGKKCFFVKFFGTEDHAWIKVEQLKPYHAHKE 68
GDLV+ KL Y WP +I + + +P + FF FGT + A++ ++L PY KE
Sbjct: 12 GDLVFAKLKGYAHWPARI----EHMTQPNRYQVFF---FGTHETAFLSPKRLFPYKECKE 64
Query: 69 EMIKINKGKRFQQAVDAVEEFLRRAKGKDQTSSHNSSDDKNRRNSSEERSRPNSGDEKRK 128
+ K NK + F + +E Q S + +K + GDE +
Sbjct: 65 KFGKPNKRRGFSAGLWEIEN-----NPTVQASDCPLASEKGSGDGPWPEPEAAEGDEDKP 119
Query: 129 LSLSEGKVKKNMGEGKKRVSSGSSERGSKSPLKRAQEQSPRKRGRPPKD 177
G G+ + K PLKR+ P + PK+
Sbjct: 120 THAGGG------GDELGKPDDDKPTEEEKGPLKRSAGDPPEDAPKRPKE 162
>gi|186928819 hepatoma-derived growth factor isoform b [Homo
sapiens]
Length = 256
Score = 48.5 bits (114), Expect = 2e-05
Identities = 56/199 (28%), Positives = 82/199 (41%), Gaps = 21/199 (10%)
Query: 23 PGKIVNPPKDLKKPRGKKCFFVKFFGTEDHAWIKVEQLKPYHAHKEEMIKINKGKRFQQA 82
P I P+ K K + V FFGT + A++ + L PY KE+ K NK K F +
Sbjct: 43 PHTIDEMPEAAVKSTANK-YQVFFFGTHETAFLGPKDLFPYEESKEKFGKPNKRKGFSEG 101
Query: 83 VDAVEEFLRRAKGKDQTSSHNSSDDKNRRNSSEERSRPNSGDEKRKLSLSEGKVKKNMGE 142
+ +E + S + SS K+ E GD +K +EG + E
Sbjct: 102 LWEIEN-----NPTVKASGYQSSQKKSCVEEPEPEPEAAEGDGDKK-GNAEGSSDE---E 152
Query: 143 GKKRVSSGSSERGSKSPLKRAQ----EQSPR--KRGRPPKDEKDLTIPESSTVKGMMAGP 196
GK + + E+ K LKR E SP+ K P+ E+ E++T++ P
Sbjct: 153 GKLVIDEPAKEKNEKGALKRRAGDLLEDSPKRPKEAENPEGEE----KEAATLEVERPLP 208
Query: 197 MAAFKWQPTASEPVKDADP 215
M K T SEP P
Sbjct: 209 MEVEK-NSTPSEPGSGRGP 226
>gi|186928821 hepatoma-derived growth factor isoform c [Homo
sapiens]
Length = 233
Score = 47.8 bits (112), Expect = 3e-05
Identities = 51/178 (28%), Positives = 75/178 (42%), Gaps = 20/178 (11%)
Query: 44 VKFFGTEDHAWIKVEQLKPYHAHKEEMIKINKGKRFQQAVDAVEEFLRRAKGKDQTSSHN 103
V FFGT + A++ + L PY KE+ K NK K F + + +E + S +
Sbjct: 40 VFFFGTHETAFLGPKDLFPYEESKEKFGKPNKRKGFSEGLWEIEN-----NPTVKASGYQ 94
Query: 104 SSDDKNRRNSSEERSRPNSGDEKRKLSLSEGKVKKNMGEGKKRVSSGSSERGSKSPLKRA 163
SS K+ E GD +K +EG + EGK + + E+ K LKR
Sbjct: 95 SSQKKSCVEEPEPEPEAAEGDGDKK-GNAEGSSDE---EGKLVIDEPAKEKNEKGALKRR 150
Query: 164 Q----EQSPR--KRGRPPKDEKDLTIPESSTVKGMMAGPMAAFKWQPTASEPVKDADP 215
E SP+ K P+ E+ E++T++ PM K T SEP P
Sbjct: 151 AGDLLEDSPKRPKEAENPEGEE----KEAATLEVERPLPMEVEK-NSTPSEPGSGRGP 203
>gi|4504191 mutS homolog 6 [Homo sapiens]
Length = 1360
Score = 47.0 bits (110), Expect = 5e-05
Identities = 41/167 (24%), Positives = 68/167 (40%), Gaps = 14/167 (8%)
Query: 9 GDLVWGKLGRYPPWPGKIVNPPKD--LKKPRGKKC-FFVKFF-GTEDHAWIKVEQLKPYH 64
GDLVW K+ YP WP + N P D + +GK V+FF + W+ LKPY
Sbjct: 93 GDLVWAKMEGYPWWPCLVYNHPFDGTFIREKGKSVRVHVQFFDDSPTRGWVSKRLLKPYT 152
Query: 65 AHKEEMIKINKGKRFQQAVDAVEEFLRRAKGKDQTSSHNSSDDKNRRNSSEERSRPNSGD 124
K + + KG F A + ++RA + DK +R P+ +
Sbjct: 153 GSKSK--EAQKGGHFYSAKPEILRAMQRA-------DEALNKDKIKRLELAVCDEPSEPE 203
Query: 125 EKRKLSLSEGKVKKNMGEGKKRVSSGSSERGSKSPLKRAQEQSPRKR 171
E+ ++ + V + E + S + +R+ Q ++R
Sbjct: 204 EEEEMEVGTTYV-TDKSEEDNEIESEEEVQPKTQGSRRSSRQIKKRR 249
>gi|42741684 zinc finger protein 265 isoform 1 [Homo sapiens]
Length = 330
Score = 46.2 bits (108), Expect = 8e-05
Identities = 46/164 (28%), Positives = 68/164 (41%), Gaps = 24/164 (14%)
Query: 24 GKIVNPPKDLKKPRGKKCFFVKFFGTEDHAWIKVEQ--------LKPYHAHKEEMIKINK 75
GK V P LK+ K+ + ED + K+++ L Y+ E NK
Sbjct: 136 GKAVGPASILKEVEDKESEGEEEDEDEDLSKYKLDEDEDEDDADLSKYNLDASEEEDSNK 195
Query: 76 GKRFQQAVDAVEEFLRRAKGKDQTSSHNSSDDKNRRNSSEERSRPNSGDEKRKLSLSEGK 135
K +++ +++ SS SS + R+ S RSR +S + R S S
Sbjct: 196 KKSNRRSRS-------KSRSSHSRSSSRSSSPSSSRSRSRSRSRSSSSSQSRSRSSSR-- 246
Query: 136 VKKNMGEGKKRVSSGSSERGSKSPLKRAQEQSP------RKRGR 173
+++ G K SS S RGS SP KR+ S RKR R
Sbjct: 247 -ERSRSRGSKSRSSSRSHRGSSSPRKRSYSSSSSSPERNRKRSR 289
Score = 37.4 bits (85), Expect = 0.036
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Query: 92 RAKGKDQTSSHNSSDDKNRRNSSEERSRPNSGDEKRKLSLSEGKVKKNMGEGKKRVSSGS 151
R + S++SS RN RSR +S +++K + + E + R SSGS
Sbjct: 264 RGSSSPRKRSYSSSSSSPERNRKRSRSRSSSSGDRKK-----RRTRSRSPERRHRSSSGS 318
Query: 152 SERGSKSPLKR 162
S GS+S K+
Sbjct: 319 SHSGSRSSSKK 329
>gi|42741682 zinc finger protein 265 isoform 2 [Homo sapiens]
Length = 320
Score = 46.2 bits (108), Expect = 8e-05
Identities = 46/164 (28%), Positives = 68/164 (41%), Gaps = 24/164 (14%)
Query: 24 GKIVNPPKDLKKPRGKKCFFVKFFGTEDHAWIKVEQ--------LKPYHAHKEEMIKINK 75
GK V P LK+ K+ + ED + K+++ L Y+ E NK
Sbjct: 136 GKAVGPASILKEVEDKESEGEEEDEDEDLSKYKLDEDEDEDDADLSKYNLDASEEEDSNK 195
Query: 76 GKRFQQAVDAVEEFLRRAKGKDQTSSHNSSDDKNRRNSSEERSRPNSGDEKRKLSLSEGK 135
K +++ +++ SS SS + R+ S RSR +S + R S S
Sbjct: 196 KKSNRRSRS-------KSRSSHSRSSSRSSSPSSSRSRSRSRSRSSSSSQSRSRSSSR-- 246
Query: 136 VKKNMGEGKKRVSSGSSERGSKSPLKRAQEQSP------RKRGR 173
+++ G K SS S RGS SP KR+ S RKR R
Sbjct: 247 -ERSRSRGSKSRSSSRSHRGSSSPRKRSYSSSSSSPERNRKRSR 289
Score = 30.0 bits (66), Expect = 5.8
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 92 RAKGKDQTSSHNSSDDKNRRNSSEERSR-PNSGDEKRKLSLSEGKVKKNMGEGKKR 146
R + S++SS RN RSR +SGD K++ + S + +GE K+
Sbjct: 264 RGSSSPRKRSYSSSSSSPERNRKRSRSRSSSSGDRKKRRTRSRSPESQVIGENTKQ 319
>gi|19913358 Wolf-Hirschhorn syndrome candidate 1 protein isoform 1
[Homo sapiens]
Length = 1365
Score = 45.1 bits (105), Expect = 2e-04
Identities = 30/123 (24%), Positives = 57/123 (46%), Gaps = 12/123 (9%)
Query: 2 AAVSLRLGDLVWGKLGRYPPWPGKIVNP---PKDLKKPRGKKCFF-VKFFGTEDHAWIKV 57
A L D++W KLG Y WP ++ +P P +++K + + F V FFG++D+ W
Sbjct: 874 AGKKLHFQDIIWVKLGNYRWWPAEVCHPKNVPPNIQKMKHEIGEFPVFFFGSKDYYWTHQ 933
Query: 58 EQLKPYHAHKEEMIKINKGKRFQQAVDAVEEFLRRAKGKDQTSSHNSSDDKNRRNSSEER 117
++ PY ++ ++G R+ Q V + + A + + + R + E
Sbjct: 934 ARVFPY-------MEGDRGSRY-QGVRGIGRVFKNALQEAEARFREIKLQREARETQESE 985
Query: 118 SRP 120
+P
Sbjct: 986 RKP 988
Score = 41.6 bits (96), Expect = 0.002
Identities = 49/186 (26%), Positives = 81/186 (43%), Gaps = 20/186 (10%)
Query: 8 LGDLVWGKLGRYPPWPGKIVNPP--KDLKKPRGKK----CFFVKFFG-TEDHAWIKVEQL 60
+GDLVW K+ YP WP + P K +G+K + V+FFG + AWI + L
Sbjct: 222 VGDLVWSKVSGYPWWPCMVSADPLLHSYTKLKGQKKSARQYHVQFFGDAPERAWIFEKSL 281
Query: 61 KPYHAHKE-EMIKINKGKRFQQAVDAVEEFLRRAKGK--DQTSSHNSSDDKNRRNSSEER 117
+ + E + K+ + + + L+ GK Q ++ S EER
Sbjct: 282 VAFEGEGQFEKLCQESAKQAPTKAEKI-KLLKPISGKLRAQWEMGIVQAEEAASMSVEER 340
Query: 118 SRPNS----GDE---KRKLSLSEGKVKKNMGEGKKRVSSGSSERGSKSPLKRAQEQSPRK 170
+ GD+ +++ G +++GE + SSG SE +++P +E P K
Sbjct: 341 KAKFTFLYVGDQLHLNPQVAKEAGIAAESLGEMAE--SSGVSEEAAENPKSVREECIPMK 398
Query: 171 RGRPPK 176
R R K
Sbjct: 399 RRRRAK 404
>gi|19913350 Wolf-Hirschhorn syndrome candidate 1 protein isoform 1
[Homo sapiens]
Length = 1365
Score = 45.1 bits (105), Expect = 2e-04
Identities = 30/123 (24%), Positives = 57/123 (46%), Gaps = 12/123 (9%)
Query: 2 AAVSLRLGDLVWGKLGRYPPWPGKIVNP---PKDLKKPRGKKCFF-VKFFGTEDHAWIKV 57
A L D++W KLG Y WP ++ +P P +++K + + F V FFG++D+ W
Sbjct: 874 AGKKLHFQDIIWVKLGNYRWWPAEVCHPKNVPPNIQKMKHEIGEFPVFFFGSKDYYWTHQ 933
Query: 58 EQLKPYHAHKEEMIKINKGKRFQQAVDAVEEFLRRAKGKDQTSSHNSSDDKNRRNSSEER 117
++ PY ++ ++G R+ Q V + + A + + + R + E
Sbjct: 934 ARVFPY-------MEGDRGSRY-QGVRGIGRVFKNALQEAEARFREIKLQREARETQESE 985
Query: 118 SRP 120
+P
Sbjct: 986 RKP 988
Score = 41.6 bits (96), Expect = 0.002
Identities = 49/186 (26%), Positives = 81/186 (43%), Gaps = 20/186 (10%)
Query: 8 LGDLVWGKLGRYPPWPGKIVNPP--KDLKKPRGKK----CFFVKFFG-TEDHAWIKVEQL 60
+GDLVW K+ YP WP + P K +G+K + V+FFG + AWI + L
Sbjct: 222 VGDLVWSKVSGYPWWPCMVSADPLLHSYTKLKGQKKSARQYHVQFFGDAPERAWIFEKSL 281
Query: 61 KPYHAHKE-EMIKINKGKRFQQAVDAVEEFLRRAKGK--DQTSSHNSSDDKNRRNSSEER 117
+ + E + K+ + + + L+ GK Q ++ S EER
Sbjct: 282 VAFEGEGQFEKLCQESAKQAPTKAEKI-KLLKPISGKLRAQWEMGIVQAEEAASMSVEER 340
Query: 118 SRPNS----GDE---KRKLSLSEGKVKKNMGEGKKRVSSGSSERGSKSPLKRAQEQSPRK 170
+ GD+ +++ G +++GE + SSG SE +++P +E P K
Sbjct: 341 KAKFTFLYVGDQLHLNPQVAKEAGIAAESLGEMAE--SSGVSEEAAENPKSVREECIPMK 398
Query: 171 RGRPPK 176
R R K
Sbjct: 399 RRRRAK 404
>gi|19913348 Wolf-Hirschhorn syndrome candidate 1 protein isoform 1
[Homo sapiens]
Length = 1365
Score = 45.1 bits (105), Expect = 2e-04
Identities = 30/123 (24%), Positives = 57/123 (46%), Gaps = 12/123 (9%)
Query: 2 AAVSLRLGDLVWGKLGRYPPWPGKIVNP---PKDLKKPRGKKCFF-VKFFGTEDHAWIKV 57
A L D++W KLG Y WP ++ +P P +++K + + F V FFG++D+ W
Sbjct: 874 AGKKLHFQDIIWVKLGNYRWWPAEVCHPKNVPPNIQKMKHEIGEFPVFFFGSKDYYWTHQ 933
Query: 58 EQLKPYHAHKEEMIKINKGKRFQQAVDAVEEFLRRAKGKDQTSSHNSSDDKNRRNSSEER 117
++ PY ++ ++G R+ Q V + + A + + + R + E
Sbjct: 934 ARVFPY-------MEGDRGSRY-QGVRGIGRVFKNALQEAEARFREIKLQREARETQESE 985
Query: 118 SRP 120
+P
Sbjct: 986 RKP 988
Score = 41.6 bits (96), Expect = 0.002
Identities = 49/186 (26%), Positives = 81/186 (43%), Gaps = 20/186 (10%)
Query: 8 LGDLVWGKLGRYPPWPGKIVNPP--KDLKKPRGKK----CFFVKFFG-TEDHAWIKVEQL 60
+GDLVW K+ YP WP + P K +G+K + V+FFG + AWI + L
Sbjct: 222 VGDLVWSKVSGYPWWPCMVSADPLLHSYTKLKGQKKSARQYHVQFFGDAPERAWIFEKSL 281
Query: 61 KPYHAHKE-EMIKINKGKRFQQAVDAVEEFLRRAKGK--DQTSSHNSSDDKNRRNSSEER 117
+ + E + K+ + + + L+ GK Q ++ S EER
Sbjct: 282 VAFEGEGQFEKLCQESAKQAPTKAEKI-KLLKPISGKLRAQWEMGIVQAEEAASMSVEER 340
Query: 118 SRPNS----GDE---KRKLSLSEGKVKKNMGEGKKRVSSGSSERGSKSPLKRAQEQSPRK 170
+ GD+ +++ G +++GE + SSG SE +++P +E P K
Sbjct: 341 KAKFTFLYVGDQLHLNPQVAKEAGIAAESLGEMAE--SSGVSEEAAENPKSVREECIPMK 398
Query: 171 RGRPPK 176
R R K
Sbjct: 399 RRRRAK 404
>gi|109633019 Wolf-Hirschhorn syndrome candidate 1 protein isoform 1
[Homo sapiens]
Length = 1365
Score = 45.1 bits (105), Expect = 2e-04
Identities = 30/123 (24%), Positives = 57/123 (46%), Gaps = 12/123 (9%)
Query: 2 AAVSLRLGDLVWGKLGRYPPWPGKIVNP---PKDLKKPRGKKCFF-VKFFGTEDHAWIKV 57
A L D++W KLG Y WP ++ +P P +++K + + F V FFG++D+ W
Sbjct: 874 AGKKLHFQDIIWVKLGNYRWWPAEVCHPKNVPPNIQKMKHEIGEFPVFFFGSKDYYWTHQ 933
Query: 58 EQLKPYHAHKEEMIKINKGKRFQQAVDAVEEFLRRAKGKDQTSSHNSSDDKNRRNSSEER 117
++ PY ++ ++G R+ Q V + + A + + + R + E
Sbjct: 934 ARVFPY-------MEGDRGSRY-QGVRGIGRVFKNALQEAEARFREIKLQREARETQESE 985
Query: 118 SRP 120
+P
Sbjct: 986 RKP 988
Score = 41.6 bits (96), Expect = 0.002
Identities = 49/186 (26%), Positives = 81/186 (43%), Gaps = 20/186 (10%)
Query: 8 LGDLVWGKLGRYPPWPGKIVNPP--KDLKKPRGKK----CFFVKFFG-TEDHAWIKVEQL 60
+GDLVW K+ YP WP + P K +G+K + V+FFG + AWI + L
Sbjct: 222 VGDLVWSKVSGYPWWPCMVSADPLLHSYTKLKGQKKSARQYHVQFFGDAPERAWIFEKSL 281
Query: 61 KPYHAHKE-EMIKINKGKRFQQAVDAVEEFLRRAKGK--DQTSSHNSSDDKNRRNSSEER 117
+ + E + K+ + + + L+ GK Q ++ S EER
Sbjct: 282 VAFEGEGQFEKLCQESAKQAPTKAEKI-KLLKPISGKLRAQWEMGIVQAEEAASMSVEER 340
Query: 118 SRPNS----GDE---KRKLSLSEGKVKKNMGEGKKRVSSGSSERGSKSPLKRAQEQSPRK 170
+ GD+ +++ G +++GE + SSG SE +++P +E P K
Sbjct: 341 KAKFTFLYVGDQLHLNPQVAKEAGIAAESLGEMAE--SSGVSEEAAENPKSVREECIPMK 398
Query: 171 RGRPPK 176
R R K
Sbjct: 399 RRRRAK 404
>gi|27477095 nuclear receptor binding SET domain protein 1 isoform a
[Homo sapiens]
Length = 2427
Score = 44.7 bits (104), Expect = 2e-04
Identities = 35/110 (31%), Positives = 50/110 (45%), Gaps = 12/110 (10%)
Query: 10 DLVWGKLGRYPPWPGKIVNP---PKDLKKPRGKKCFF-VKFFGTEDHAWIKVEQLKPY-H 64
++VW K+GRY WP +I +P P ++ K R F V FFG+ D+ W ++ PY
Sbjct: 1489 EIVWVKVGRYRWWPAEICHPRAVPSNIDKMRHDVGEFPVLFFGSNDYLWTHQARVFPYME 1548
Query: 65 AHKEEMIKINKG------KRFQQAVDAVEEFLRRAKGKDQTSSHNSSDDK 108
K+ KG K Q+A EE L+ K Q +D K
Sbjct: 1549 GDVSSKDKMGKGVDGTYKKALQEAAARFEE-LKAQKELRQLQEDRKNDKK 1597
Score = 33.9 bits (76), Expect = 0.40
Identities = 21/82 (25%), Positives = 38/82 (46%), Gaps = 11/82 (13%)
Query: 8 LGDLVWGKLGRYPPWPGKIVNPP-------KDLKKPRGKKCFFVKFFG-TEDHAWI---K 56
+GDL+W K R P WP +I + P + R + ++V+ FG + AW+
Sbjct: 54 VGDLIWAKFKRRPWWPCRICSDPLINTHSKMKVSNRRPYRQYYVEAFGDPSERAWVAGKA 113
Query: 57 VEQLKPYHAHKEEMIKINKGKR 78
+ + H +E + +GK+
Sbjct: 114 IVMFEGRHQFEELPVLRRRGKQ 135
>gi|19923586 nuclear receptor binding SET domain protein 1 isoform b
[Homo sapiens]
Length = 2696
Score = 44.7 bits (104), Expect = 2e-04
Identities = 35/110 (31%), Positives = 50/110 (45%), Gaps = 12/110 (10%)
Query: 10 DLVWGKLGRYPPWPGKIVNP---PKDLKKPRGKKCFF-VKFFGTEDHAWIKVEQLKPY-H 64
++VW K+GRY WP +I +P P ++ K R F V FFG+ D+ W ++ PY
Sbjct: 1758 EIVWVKVGRYRWWPAEICHPRAVPSNIDKMRHDVGEFPVLFFGSNDYLWTHQARVFPYME 1817
Query: 65 AHKEEMIKINKG------KRFQQAVDAVEEFLRRAKGKDQTSSHNSSDDK 108
K+ KG K Q+A EE L+ K Q +D K
Sbjct: 1818 GDVSSKDKMGKGVDGTYKKALQEAAARFEE-LKAQKELRQLQEDRKNDKK 1866
Score = 33.9 bits (76), Expect = 0.40
Identities = 21/82 (25%), Positives = 38/82 (46%), Gaps = 11/82 (13%)
Query: 8 LGDLVWGKLGRYPPWPGKIVNPP-------KDLKKPRGKKCFFVKFFG-TEDHAWI---K 56
+GDL+W K R P WP +I + P + R + ++V+ FG + AW+
Sbjct: 323 VGDLIWAKFKRRPWWPCRICSDPLINTHSKMKVSNRRPYRQYYVEAFGDPSERAWVAGKA 382
Query: 57 VEQLKPYHAHKEEMIKINKGKR 78
+ + H +E + +GK+
Sbjct: 383 IVMFEGRHQFEELPVLRRRGKQ 404
>gi|89276756 serine/threonine-protein kinase PRP4K [Homo sapiens]
Length = 1007
Score = 44.3 bits (103), Expect = 3e-04
Identities = 38/144 (26%), Positives = 58/144 (40%), Gaps = 7/144 (4%)
Query: 60 LKPYHAHKEEMIKINK----GKRFQQAVDAVEEFLRRAKGKDQTSSHNSSDDKNRRNSSE 115
L+ Y + EE +I++ G R + + L K T + S K R
Sbjct: 137 LQGYESGSEEEGEIHEKARNGNRSSTRSSSTKGKLELVDNKITTKKRSKSRSKERTRHRS 196
Query: 116 ERSRPNSGDE--KRKLSLSEGKVKKNMGEGKKRVSSGSSERGSKSPLKRAQEQSPRKRGR 173
++ + G E K K + S+ K +K KR S R SKSP R + Q + R
Sbjct: 197 DKKKSKGGIEIVKEKTTRSKSKERKKSKSPSKRSKSQDQARKSKSPTLRRRSQEKIGKAR 256
Query: 174 PPKDEKDLTIPESSTVKGMMAGPM 197
P D+K + I + S K P+
Sbjct: 257 SPTDDK-VKIEDKSKSKDRKKSPI 279
Score = 35.0 bits (79), Expect = 0.18
Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 6/86 (6%)
Query: 91 RRAKGKDQTSSHNSSDDKNRRNSSEERSRPNSGDEKRKLSLSEGKVKKNMGEGKKRVSSG 150
RRAK + S + RR S R+RP R+ S+ N +R S
Sbjct: 390 RRAKSR---SLERKRREPERRRLSSPRTRPRDDILSRR-ERSKDASPINRWSPTRRRSRS 445
Query: 151 SSERGSKSPLKRAQEQSPRKRGRPPK 176
R S+SPL+R+ +SPR+R R P+
Sbjct: 446 PIRRRSRSPLRRS--RSPRRRSRSPR 469
Score = 32.7 bits (73), Expect = 0.89
Identities = 28/97 (28%), Positives = 41/97 (42%), Gaps = 13/97 (13%)
Query: 92 RAKGKDQTSSHNSSDDKNRRNS---SEERSRPNSGDEKRKLSLSEGKVKKNMGEGKKRVS 148
R+ D+ + S K+R+ S +E RSR + + L GK K K+R S
Sbjct: 256 RSPTDDKVKIEDKSKSKDRKKSPIINESRSRDRGKKSRSPVDL-RGKSKDRRSRSKERKS 314
Query: 149 SGSSERGSKSPLKR--------AQEQSPRKR-GRPPK 176
S K P+K + +SP +R GR PK
Sbjct: 315 KRSETDKEKKPIKSPSKDASSGKENRSPSRRPGRSPK 351
Score = 32.0 bits (71), Expect = 1.5
Identities = 31/122 (25%), Positives = 53/122 (43%), Gaps = 23/122 (18%)
Query: 74 NKGKRFQQAVDAVEEFLRRAKGKDQTSSHNSSDDKNRRNSSEERSRP--------NSGDE 125
++GK+ + VD R K KD+ S S + K++R+ +++ +P +SG E
Sbjct: 287 DRGKKSRSPVDL------RGKSKDRRS--RSKERKSKRSETDKEKKPIKSPSKDASSGKE 338
Query: 126 KRKLSLSEGKVKKNMGEGKKRVSSGSSERGSKSPL----KRAQEQSPRKRGRPPKDEKDL 181
R S G+ K K R S+SPL + Q +SP + P + K
Sbjct: 339 NRSPSRRPGRSPKRRSLSPK---PRDKSRRSRSPLLNDRRSKQSKSPSRTLSPGRRAKSR 395
Query: 182 TI 183
++
Sbjct: 396 SL 397
Score = 31.2 bits (69), Expect = 2.6
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Query: 90 LRRAKGKDQTSSHNSSDDKNRRNSSEERSRPNSGDEKRKLSLS---EGKVKKNMGEGKKR 146
LRR++ + S D+ RR+ S R R S +R+ S S E K K ++ EG K
Sbjct: 455 LRRSRSPRRRSRSPRRRDRGRRSRSRLRRRSRSRGGRRRRSRSKVKEDKFKGSLSEGMKV 514
Query: 147 VSSGSSE 153
SS+
Sbjct: 515 EQESSSD 521
>gi|116812577 LUC7-like 2 [Homo sapiens]
Length = 392
Score = 43.5 bits (101), Expect = 5e-04
Identities = 37/128 (28%), Positives = 61/128 (47%), Gaps = 8/128 (6%)
Query: 56 KVEQLKPYHAHKEEMIKINKGKRFQQAVDAVEEFLRRAKGKDQTSSHNSSDDKNR-RNSS 114
K+E+LK A K+E + KR ++ E LRR++ SH+ + ++R R
Sbjct: 224 KLEELKRVVAEKQEKRNQERLKRREEREREEREKLRRSR------SHSKNPKRSRSREHR 277
Query: 115 EERSRPNSGDEKRKL-SLSEGKVKKNMGEGKKRVSSGSSERGSKSPLKRAQEQSPRKRGR 173
RSR S + KR+ S S K ++ R S S +R S R++E+S R+ +
Sbjct: 278 RHRSRSMSRERKRRTRSKSREKRHRHRSRSSSRSRSRSHQRSRHSSRDRSRERSKRRSSK 337
Query: 174 PPKDEKDL 181
++DL
Sbjct: 338 ERFRDQDL 345
Score = 32.0 bits (71), Expect = 1.5
Identities = 19/80 (23%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Query: 92 RAKGKDQTSSHNSSDDKNRRNSSEERSRPNSGDEKRKLSLSEGKVKKNMGEGKKRVSSGS 151
R+K +++ H S R+ S +RSR +S D R+ S ++ + ++S
Sbjct: 293 RSKSREKRHRHRSRSSSRSRSRSHQRSRHSSRDRSRERSKRRSSKERFRDQD---LASCD 349
Query: 152 SERGSKSPLKRAQEQSPRKR 171
+R S+ R +++ +KR
Sbjct: 350 RDRSSRDRSPRDRDRKDKKR 369
>gi|117935038 cylicin, basic protein of sperm head cytoskeleton 1
[Homo sapiens]
Length = 651
Score = 42.7 bits (99), Expect = 9e-04
Identities = 47/208 (22%), Positives = 76/208 (36%), Gaps = 27/208 (12%)
Query: 67 KEEMIKINKGKRFQQAVDAVEEFLRRAKGKDQTSSHNSSDDKNRRNSSEERSRPNSGDEK 126
K++ KI + +++ E K K + + N KN S++ S P +K
Sbjct: 397 KKDAKKITFSTDSESELESKESQKDEKKDKKDSKTDNKKSVKNDEESTDADSEPKGDSKK 456
Query: 127 RKLSLSEGKVKKNMGEGKK--RVSSGSSERGSKSPLKRAQEQSPRKRGRPPKDEKDLTIP 184
K +GK + KK + ++ S+E S LK+ ++ S K+G +KD
Sbjct: 457 GKKDEKKGKKDSKKDDKKKDAKKNAESTEMESDLELKKDKKHSKEKKGSKKDIKKDARKD 516
Query: 185 ESSTVKGMMAGPMAAFKWQPTASEPVKDADPHFHHFLLSQTEKPAVCYQAITKKLKICEE 244
ST FK S +K +D TE Y+ KK
Sbjct: 517 TESTDAEFDESSKTGFK----TSTKIKGSD----------TESEESLYKPGAKK------ 556
Query: 245 ETGSTSIQAADSTAVNGSITPTDKKIGF 272
I +D T+ N + + K GF
Sbjct: 557 -----KIDESDGTSANSKMEGLESKRGF 579
>gi|21040326 SON DNA-binding protein isoform F [Homo sapiens]
Length = 2426
Score = 42.7 bits (99), Expect = 9e-04
Identities = 30/124 (24%), Positives = 55/124 (44%), Gaps = 2/124 (1%)
Query: 75 KGKRFQQAVDAVEEFLRRAKGKDQTSSHNSSDDKNRRNSSEERSRPNSGDEKRKLSLSEG 134
K K+ + +E R + + ++ SS+ K+R+ +SE RSR K K S+
Sbjct: 1802 KSKKNKNRDKGEKEKKRDSSLRSRSKRSKSSEHKSRKRTSESRSRARKRSSKSKSHRSQT 1861
Query: 135 KVKKNMGEGKKRVSSGSSERGSKSPLKRAQEQSP--RKRGRPPKDEKDLTIPESSTVKGM 192
+ + ++ S S RG +S K +++SP R + R K ++ + TV+
Sbjct: 1862 RSRSRSRRRRRSSRSRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTVRAR 1921
Query: 193 MAGP 196
P
Sbjct: 1922 SRTP 1925
Score = 32.3 bits (72), Expect = 1.2
Identities = 28/121 (23%), Positives = 49/121 (40%), Gaps = 4/121 (3%)
Query: 56 KVEQLKPYHAHKEEMIKINKGKRFQQAVDAVEEFLRRAKGKDQTSSHNS---SDDKNRRN 112
K E+ K + K +K + E R K ++ SH S S ++RR
Sbjct: 1811 KGEKEKKRDSSLRSRSKRSKSSEHKSRKRTSESRSRARKRSSKSKSHRSQTRSRSRSRRR 1870
Query: 113 SSEERSRPNSGDEKRKLSLSEGKVKKNMGEGKKRVSSGSSERGSKSPLKRAQEQSPRKRG 172
RSR S + + K+ + ++R SS R ++ + RA+ ++P +R
Sbjct: 1871 RRSSRSRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTV-RARSRTPSRRS 1929
Query: 173 R 173
R
Sbjct: 1930 R 1930
>gi|21040314 SON DNA-binding protein isoform B [Homo sapiens]
Length = 2303
Score = 42.7 bits (99), Expect = 9e-04
Identities = 30/124 (24%), Positives = 55/124 (44%), Gaps = 2/124 (1%)
Query: 75 KGKRFQQAVDAVEEFLRRAKGKDQTSSHNSSDDKNRRNSSEERSRPNSGDEKRKLSLSEG 134
K K+ + +E R + + ++ SS+ K+R+ +SE RSR K K S+
Sbjct: 1802 KSKKNKNRDKGEKEKKRDSSLRSRSKRSKSSEHKSRKRTSESRSRARKRSSKSKSHRSQT 1861
Query: 135 KVKKNMGEGKKRVSSGSSERGSKSPLKRAQEQSP--RKRGRPPKDEKDLTIPESSTVKGM 192
+ + ++ S S RG +S K +++SP R + R K ++ + TV+
Sbjct: 1862 RSRSRSRRRRRSSRSRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTVRAR 1921
Query: 193 MAGP 196
P
Sbjct: 1922 SRTP 1925
Score = 32.3 bits (72), Expect = 1.2
Identities = 28/121 (23%), Positives = 49/121 (40%), Gaps = 4/121 (3%)
Query: 56 KVEQLKPYHAHKEEMIKINKGKRFQQAVDAVEEFLRRAKGKDQTSSHNS---SDDKNRRN 112
K E+ K + K +K + E R K ++ SH S S ++RR
Sbjct: 1811 KGEKEKKRDSSLRSRSKRSKSSEHKSRKRTSESRSRARKRSSKSKSHRSQTRSRSRSRRR 1870
Query: 113 SSEERSRPNSGDEKRKLSLSEGKVKKNMGEGKKRVSSGSSERGSKSPLKRAQEQSPRKRG 172
RSR S + + K+ + ++R SS R ++ + RA+ ++P +R
Sbjct: 1871 RRSSRSRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTV-RARSRTPSRRS 1929
Query: 173 R 173
R
Sbjct: 1930 R 1930
>gi|19913356 Wolf-Hirschhorn syndrome candidate 1 protein isoform 3
[Homo sapiens]
Length = 647
Score = 41.6 bits (96), Expect = 0.002
Identities = 49/186 (26%), Positives = 81/186 (43%), Gaps = 20/186 (10%)
Query: 8 LGDLVWGKLGRYPPWPGKIVNPP--KDLKKPRGKK----CFFVKFFG-TEDHAWIKVEQL 60
+GDLVW K+ YP WP + P K +G+K + V+FFG + AWI + L
Sbjct: 222 VGDLVWSKVSGYPWWPCMVSADPLLHSYTKLKGQKKSARQYHVQFFGDAPERAWIFEKSL 281
Query: 61 KPYHAHKE-EMIKINKGKRFQQAVDAVEEFLRRAKGK--DQTSSHNSSDDKNRRNSSEER 117
+ + E + K+ + + + L+ GK Q ++ S EER
Sbjct: 282 VAFEGEGQFEKLCQESAKQAPTKAEKI-KLLKPISGKLRAQWEMGIVQAEEAASMSVEER 340
Query: 118 SRPNS----GDE---KRKLSLSEGKVKKNMGEGKKRVSSGSSERGSKSPLKRAQEQSPRK 170
+ GD+ +++ G +++GE + SSG SE +++P +E P K
Sbjct: 341 KAKFTFLYVGDQLHLNPQVAKEAGIAAESLGEMAE--SSGVSEEAAENPKSVREECIPMK 398
Query: 171 RGRPPK 176
R R K
Sbjct: 399 RRRRAK 404
>gi|6594683 Wolf-Hirschhorn syndrome candidate 1 protein isoform 4
[Homo sapiens]
Length = 629
Score = 41.6 bits (96), Expect = 0.002
Identities = 49/186 (26%), Positives = 81/186 (43%), Gaps = 20/186 (10%)
Query: 8 LGDLVWGKLGRYPPWPGKIVNPP--KDLKKPRGKK----CFFVKFFG-TEDHAWIKVEQL 60
+GDLVW K+ YP WP + P K +G+K + V+FFG + AWI + L
Sbjct: 222 VGDLVWSKVSGYPWWPCMVSADPLLHSYTKLKGQKKSARQYHVQFFGDAPERAWIFEKSL 281
Query: 61 KPYHAHKE-EMIKINKGKRFQQAVDAVEEFLRRAKGK--DQTSSHNSSDDKNRRNSSEER 117
+ + E + K+ + + + L+ GK Q ++ S EER
Sbjct: 282 VAFEGEGQFEKLCQESAKQAPTKAEKI-KLLKPISGKLRAQWEMGIVQAEEAASMSVEER 340
Query: 118 SRPNS----GDE---KRKLSLSEGKVKKNMGEGKKRVSSGSSERGSKSPLKRAQEQSPRK 170
+ GD+ +++ G +++GE + SSG SE +++P +E P K
Sbjct: 341 KAKFTFLYVGDQLHLNPQVAKEAGIAAESLGEMAE--SSGVSEEAAENPKSVREECIPMK 398
Query: 171 RGRPPK 176
R R K
Sbjct: 399 RRRRAK 404
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.132 0.383
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,990,466
Number of Sequences: 37866
Number of extensions: 953473
Number of successful extensions: 5219
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 110
Number of HSP's successfully gapped in prelim test: 245
Number of HSP's that attempted gapping in prelim test: 4232
Number of HSP's gapped (non-prelim): 1012
length of query: 553
length of database: 18,247,518
effective HSP length: 107
effective length of query: 446
effective length of database: 14,195,856
effective search space: 6331351776
effective search space used: 6331351776
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.