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Search of human proteins with 40354197
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|40354197 THAP domain containing 11 [Homo sapiens]
(314 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|40354197 THAP domain containing 11 [Homo sapiens] 619 e-177
gi|4507379 TATA box binding protein [Homo sapiens] 77 3e-14
gi|33286444 mastermind-like 2 [Homo sapiens] 74 2e-13
gi|56549696 E1A binding protein p400 [Homo sapiens] 69 4e-12
gi|17017963 forkhead box P2 isoform I [Homo sapiens] 68 9e-12
gi|22538413 forkhead box P2 isoform III [Homo sapiens] 68 9e-12
gi|149999352 forkhead box P2 isoform II [Homo sapiens] 68 9e-12
gi|33457336 chromosome 14 open reading frame 4 [Homo sapiens] 68 1e-11
gi|110347429 mediator complex subunit 12 [Homo sapiens] 67 3e-11
gi|48255900 SWI/SNF-related matrix-associated actin-dependent re... 65 1e-10
gi|48255898 SWI/SNF-related matrix-associated actin-dependent re... 65 1e-10
gi|32307124 nuclear receptor coactivator 3 isoform b [Homo sapiens] 64 2e-10
gi|239757877 PREDICTED: FERM and PDZ domain containing 3 [Homo s... 64 2e-10
gi|89060961 PREDICTED: FERM and PDZ domain containing 3 [Homo sa... 64 2e-10
gi|89059963 PREDICTED: FERM and PDZ domain containing 3 [Homo sa... 64 2e-10
gi|55956910 meningioma 1 [Homo sapiens] 64 2e-10
gi|38787935 BMP-2 inducible kinase isoform a [Homo sapiens] 63 4e-10
gi|38787904 BMP-2 inducible kinase isoform b [Homo sapiens] 63 4e-10
gi|32307126 nuclear receptor coactivator 3 isoform a [Homo sapiens] 62 5e-10
gi|32307128 nuclear receptor coactivator 6 [Homo sapiens] 62 9e-10
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 60 3e-09
gi|21322252 androgen receptor isoform 1 [Homo sapiens] 60 3e-09
gi|122937189 family with sequence similarity 155, member A [Homo... 58 1e-08
gi|189491748 ataxin 1 [Homo sapiens] 57 2e-08
gi|51479158 ataxin 1 [Homo sapiens] 57 2e-08
gi|171543895 ataxin 2 [Homo sapiens] 57 2e-08
gi|226442791 runt-related transcription factor 2 isoform b [Homo... 56 4e-08
gi|226442783 runt-related transcription factor 2 isoform a [Homo... 56 4e-08
gi|66934969 runt-related transcription factor 2 isoform c [Homo ... 56 4e-08
gi|38158015 mastermind-like 3 [Homo sapiens] 56 4e-08
>gi|40354197 THAP domain containing 11 [Homo sapiens]
Length = 314
Score = 619 bits (1596), Expect = e-177
Identities = 314/314 (100%), Positives = 314/314 (100%)
Query: 1 MPGFTCCVPGCYNNSHRDKALHFYTFPKDAELRRLWLKNVSRAGVSGCFSTFQPTTGHRL 60
MPGFTCCVPGCYNNSHRDKALHFYTFPKDAELRRLWLKNVSRAGVSGCFSTFQPTTGHRL
Sbjct: 1 MPGFTCCVPGCYNNSHRDKALHFYTFPKDAELRRLWLKNVSRAGVSGCFSTFQPTTGHRL 60
Query: 61 CSVHFQGGRKTYTVRVPTIFPLRGVNERKVARRPAGAAAARRRQQQQQQQQQQQQQQQQQ 120
CSVHFQGGRKTYTVRVPTIFPLRGVNERKVARRPAGAAAARRRQQQQQQQQQQQQQQQQQ
Sbjct: 61 CSVHFQGGRKTYTVRVPTIFPLRGVNERKVARRPAGAAAARRRQQQQQQQQQQQQQQQQQ 120
Query: 121 QQQQQQQQQQQQSSPSASTAQTAQLQPNLVSASAAVLLTLQATVDSSQAPGSVQPAPITP 180
QQQQQQQQQQQQSSPSASTAQTAQLQPNLVSASAAVLLTLQATVDSSQAPGSVQPAPITP
Sbjct: 121 QQQQQQQQQQQQSSPSASTAQTAQLQPNLVSASAAVLLTLQATVDSSQAPGSVQPAPITP 180
Query: 181 TGEDVKPIDLTVQVEFAAAEGAAAAAAASELQAATAGLEAAECPMGPQLVVVGEEGFPDT 240
TGEDVKPIDLTVQVEFAAAEGAAAAAAASELQAATAGLEAAECPMGPQLVVVGEEGFPDT
Sbjct: 181 TGEDVKPIDLTVQVEFAAAEGAAAAAAASELQAATAGLEAAECPMGPQLVVVGEEGFPDT 240
Query: 241 GSDHSYSLSSGTTEEELLRKLNEQRDILALMEVKMKEMKGSIRHLRLTEAKLREELREKD 300
GSDHSYSLSSGTTEEELLRKLNEQRDILALMEVKMKEMKGSIRHLRLTEAKLREELREKD
Sbjct: 241 GSDHSYSLSSGTTEEELLRKLNEQRDILALMEVKMKEMKGSIRHLRLTEAKLREELREKD 300
Query: 301 RLLAMAVIRKKHGM 314
RLLAMAVIRKKHGM
Sbjct: 301 RLLAMAVIRKKHGM 314
>gi|4507379 TATA box binding protein [Homo sapiens]
Length = 339
Score = 76.6 bits (187), Expect = 3e-14
Identities = 41/82 (50%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 101 RRRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSPSASTAQTAQLQPNLVSASAAVLLTL 160
+++QQQQQQQQQQQQQQQQQQQQQQQQQQQQQ+ +A+ Q+ Q ++ A L
Sbjct: 64 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQAVAAAAVQQSTSQQATQGTSGQAPQLFH 123
Query: 161 QATVDSSQAPGS--VQPAPITP 180
T+ ++ PG+ + P+P+TP
Sbjct: 124 SQTLTTAPLPGTTPLYPSPMTP 145
Score = 40.8 bits (94), Expect = 0.002
Identities = 31/87 (35%), Positives = 37/87 (42%), Gaps = 10/87 (11%)
Query: 94 PAGAAAARRRQQQQQQQQQQQQQQQQQQQQQ--------QQQQQQQQSSPSASTAQTAQL 145
P G + Q ++QQ+QQQQQQ QQQQQQQQ Q Q
Sbjct: 33 PYGTGLTPQPIQNTNSLSILEEQQRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ 92
Query: 146 QPNLVSASAAVLLTLQATVD--SSQAP 170
Q V+A+A T Q S QAP
Sbjct: 93 QQQAVAAAAVQQSTSQQATQGTSGQAP 119
>gi|33286444 mastermind-like 2 [Homo sapiens]
Length = 1156
Score = 73.9 bits (180), Expect = 2e-13
Identities = 44/115 (38%), Positives = 65/115 (56%), Gaps = 11/115 (9%)
Query: 38 KNVSRAGVSGCFSTFQPTTGHRLCSVHFQGGRKTYTVRVPTIFPLRGVNERKVARRPAGA 97
+++SR+ ++ +P G+ HF + ++P++ P ++
Sbjct: 535 QDLSRSFINNPHPAMEPRQGNTKPLFHFNSDQANQ--QMPSVLP---------SQNKPSL 583
Query: 98 AAARRRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSPSASTAQTAQLQPNLVSA 152
++QQQQQQQQQQQQQQQQQQQQQQQQQQQQQ S+ +AQ Q Q + +SA
Sbjct: 584 LHYTQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSISAQQQQQQQSSISA 638
Score = 69.7 bits (169), Expect = 3e-12
Identities = 38/70 (54%), Positives = 50/70 (71%), Gaps = 5/70 (7%)
Query: 87 ERKVARRPAGAAAARRRQQQQ-----QQQQQQQQQQQQQQQQQQQQQQQQQSSPSASTAQ 141
+++ ++ + +A+++QQQQ QQQQQQQQQQQQQQQQQQQQQQQQQ PS+ AQ
Sbjct: 613 QQQQQQQQQSSISAQQQQQQQSSISAQQQQQQQQQQQQQQQQQQQQQQQQQQQPSSQPAQ 672
Query: 142 TAQLQPNLVS 151
+ QP L S
Sbjct: 673 SLPSQPLLRS 682
Score = 30.4 bits (67), Expect = 2.1
Identities = 17/54 (31%), Positives = 27/54 (50%)
Query: 95 AGAAAARRRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSPSASTAQTAQLQPN 148
+GA+ A Q+ QQ +Q +QQ + QQ QQQ P+ +A + P+
Sbjct: 418 SGASRALPSWQEVSHAQQLKQIAANRQQHARMQQHQQQHQPTNWSALPSSAGPS 471
Score = 29.3 bits (64), Expect = 4.7
Identities = 38/159 (23%), Positives = 52/159 (32%), Gaps = 20/159 (12%)
Query: 43 AGVSGCFSTFQPTTGHRLCSVHFQGGRK---TYTVRVPTIFPLRGVNERKVA------RR 93
AG G +P H + S+ Q T P G ++++ A R
Sbjct: 927 AGSVGNSQQLRPNLTHSMASMPPQRTSNVMITSNTTAPNWASQEGTSKQQEALTSAGVRF 986
Query: 94 PAGAAAARRRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSPSASTAQTAQ--------- 144
P G AA Q QQ QQ Q+ Q Q P +QT
Sbjct: 987 PTGTPAAYTPNQSLQQAVGSQQFSQRAVAPPNQLTPAVQMRPMNQMSQTLNGQTMGPLRG 1046
Query: 145 --LQPNLVSASAAVLLTLQATVDSSQAPGSVQPAPITPT 181
L+PN +S L T + G QP +TP+
Sbjct: 1047 LNLRPNQLSTQILPNLNQSGTGLNQSRTGINQPPSLTPS 1085
>gi|56549696 E1A binding protein p400 [Homo sapiens]
Length = 3122
Score = 69.3 bits (168), Expect = 4e-12
Identities = 45/125 (36%), Positives = 59/125 (47%), Gaps = 1/125 (0%)
Query: 76 VPTIFPLRGVNERKVARRPAGAAAARRRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSP 135
VP + GV PA R++QQQQQQQQQQQQQQQQQQQQQQQQQQQ ++
Sbjct: 2693 VPQVSQATGVQLPGKTITPAHFQLLRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQTTTTS 2752
Query: 136 SASTAQTAQLQPNLVSASAAVLLTLQATVDSSQAPGSVQPAPITPTGEDVKPIDLTVQVE 195
Q + A LT + + + + P P P + P T QV+
Sbjct: 2753 QVQVPQIQGQAQSPAQIKAVGKLTPEHLIKMQKQKLQMPPQPPPPQAQSAPP-QPTAQVQ 2811
Query: 196 FAAAE 200
++
Sbjct: 2812 VQTSQ 2816
Score = 37.0 bits (84), Expect = 0.023
Identities = 48/225 (21%), Positives = 71/225 (31%), Gaps = 43/225 (19%)
Query: 38 KNVSRAGVSGCFSTFQPTTGHRLCSVHFQGGRKTYTVRVPTIFPLRGVNERK-------- 89
KN S ++ + T +L + HF + T R P I PL G+N +
Sbjct: 2401 KNNRPLRTSQIYAQDENATHTQLYTSHFDLMKMTAGKRSPPIKPLLGMNPFQKNPKHASV 2460
Query: 90 ----------------VARRPAGAAAARRRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQS 133
VA A A ++ QQ+ QQ Q Q Q QQ
Sbjct: 2461 LAESGINYDKPLPPIQVASLRAERIAKEKKALADQQKAQQPAVAQPPPPQPQPPPPPQQP 2520
Query: 134 SPSASTAQTAQLQPNLVSASAAVLLTLQATVDSSQAPGSVQPAPITPTGEDVKPIDLTVQ 193
P Q A QP P +VQP P +P+ +
Sbjct: 2521 PPPLPQPQAAGSQP-------------------PAGPPAVQPQPQPQPQTQPQPVQAPAK 2561
Query: 194 VEFAAAEGAAAAAAASELQAATAGLEAAECPMGPQLVVVGEEGFP 238
+ A G +AA A ++ + G + ++V G P
Sbjct: 2562 AQPAITTGGSAAVLAGTIKTSVTGTSMPTGAVSGNVIVNTIAGVP 2606
Score = 32.7 bits (73), Expect = 0.43
Identities = 31/124 (25%), Positives = 49/124 (39%), Gaps = 3/124 (2%)
Query: 102 RRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSPSASTAQTAQLQPNLVSASAAVLLT-L 160
++Q QQQ+ Q Q Q QQ+ QQ ++P A QP L + ++
Sbjct: 2933 KQQAVQQQKAIQPQAAQGPAAVQQKITAQQITTPGAQQKVAYAAQPALKTQFLTTPISQA 2992
Query: 161 QATVDSSQAPGSVQPAPITPTGEDVKPIDLTVQVEFAAAEGAAAAAAASELQAATAGLEA 220
Q + Q +Q A + + P+ QV A+A A+ + QA AG +
Sbjct: 2993 QKLAGAQQVQTQIQVAKLPQVVQQQTPVASIQQV--ASASQQASPQTVALTQATAAGQQV 3050
Query: 221 AECP 224
P
Sbjct: 3051 QMIP 3054
Score = 30.0 bits (66), Expect = 2.8
Identities = 32/118 (27%), Positives = 44/118 (37%), Gaps = 1/118 (0%)
Query: 104 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSPSASTAQTAQLQPNLVSASAAVLLTLQAT 163
QQ + +QQ QQQ+ Q Q Q Q +A T Q + A+ L T T
Sbjct: 2927 QQLLKLKQQAVQQQKAIQPQAAQGPAAVQQKITAQQITTPGAQQKVAYAAQPALKTQFLT 2986
Query: 164 VDSSQAPGSVQPAPITPTGEDVKPIDLTVQVEFAAAEGAAAAAAASELQAATAGLEAA 221
SQA + A T V + VQ + A A+A+ + T L A
Sbjct: 2987 TPISQAQ-KLAGAQQVQTQIQVAKLPQVVQQQTPVASIQQVASASQQASPQTVALTQA 3043
>gi|17017963 forkhead box P2 isoform I [Homo sapiens]
Length = 715
Score = 68.2 bits (165), Expect = 9e-12
Identities = 36/68 (52%), Positives = 43/68 (63%)
Query: 101 RRRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSPSASTAQTAQLQPNLVSASAAVLLTL 160
+++QQQQQQQQQQQQQQQQQQQQQQQQQQQQQ P + Q Q +A L+
Sbjct: 159 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHPGKQAKEQQQQQQQQQQLAAQQLVFQ 218
Query: 161 QATVDSSQ 168
Q + Q
Sbjct: 219 QQLLQMQQ 226
Score = 66.2 bits (160), Expect = 3e-11
Identities = 36/61 (59%), Positives = 40/61 (65%)
Query: 101 RRRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSPSASTAQTAQLQPNLVSASAAVLLTL 160
+++QQQQQQQQQQQQQQQQQQQQQQQQQQQQQ A+ Q Q AA L
Sbjct: 158 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHPGKQAKEQQQQQQQQQQLAAQQLVF 217
Query: 161 Q 161
Q
Sbjct: 218 Q 218
Score = 63.2 bits (152), Expect = 3e-10
Identities = 45/111 (40%), Positives = 56/111 (50%), Gaps = 11/111 (9%)
Query: 101 RRRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQS------SPSASTAQTAQLQPNLVSASA 154
+++QQQQQQQQQQQQQQQQQQQQQQQQQQQQQ A Q Q Q ++A
Sbjct: 155 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHPGKQAKEQQQQQQQQQQLAAQQ 214
Query: 155 AV----LLTLQATVDSSQAPGSVQPAPIT-PTGEDVKPIDLTVQVEFAAAE 200
V LL +Q + I+ P G+ P+ Q + AE
Sbjct: 215 LVFQQQLLQMQQLQQQQHLLSLQRQGLISIPPGQAALPVQSLPQAGLSPAE 265
Score = 61.6 bits (148), Expect = 9e-10
Identities = 30/40 (75%), Positives = 32/40 (80%)
Query: 102 RRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSPSASTAQ 141
++QQQQQQQQQQQQQQQQQQQQQQQQQQQQQ Q
Sbjct: 152 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ 191
Score = 57.8 bits (138), Expect = 1e-08
Identities = 30/43 (69%), Positives = 30/43 (69%)
Query: 104 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSPSASTAQTAQLQ 146
Q QQQQQQQQQQQQQQQQQQQQQQQQQQ Q Q Q
Sbjct: 149 QLLQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ 191
Score = 52.8 bits (125), Expect = 4e-07
Identities = 29/48 (60%), Positives = 32/48 (66%), Gaps = 3/48 (6%)
Query: 102 RRQQQQ---QQQQQQQQQQQQQQQQQQQQQQQQQSSPSASTAQTAQLQ 146
++QQ+Q Q QQQQQQQQQQQQQQQQQQQQQQ Q Q Q
Sbjct: 140 KKQQEQLHLQLLQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ 187
Score = 51.2 bits (121), Expect = 1e-06
Identities = 26/46 (56%), Positives = 30/46 (65%)
Query: 101 RRRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSPSASTAQTAQLQ 146
+++Q+Q Q QQQQQQQQQQQQQQQQQQQQ Q Q Q
Sbjct: 140 KKQQEQLHLQLLQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ 185
Score = 41.2 bits (95), Expect = 0.001
Identities = 24/48 (50%), Positives = 28/48 (58%), Gaps = 6/48 (12%)
Query: 105 QQQQQQQQQQQQQQQ------QQQQQQQQQQQQQSSPSASTAQTAQLQ 146
QQQQ Q+ ++QQ+Q QQQQQQQQQQQQQ Q Q Q
Sbjct: 131 QQQQLQEFYKKQQEQLHLQLLQQQQQQQQQQQQQQQQQQQQQQQQQQQ 178
Score = 40.0 bits (92), Expect = 0.003
Identities = 27/88 (30%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 87 ERKVARRPAGAAAARRRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSPSASTAQTAQLQ 146
+++ + P A +++QQQQQQQ QQ QQQ Q QQ QQQQ S +
Sbjct: 186 QQQQQQHPGKQAKEQQQQQQQQQQLAAQQLVFQQQLLQMQQLQQQQHLLSLQRQGLISIP 245
Query: 147 PNLVSASAAVLLTLQATVDSSQAPGSVQ 174
P + L +Q+ + +P +Q
Sbjct: 246 PGQAA------LPVQSLPQAGLSPAEIQ 267
Score = 39.7 bits (91), Expect = 0.004
Identities = 24/47 (51%), Positives = 26/47 (55%), Gaps = 4/47 (8%)
Query: 104 QQQQQQQ----QQQQQQQQQQQQQQQQQQQQQQSSPSASTAQTAQLQ 146
QQQQ Q+ QQ+Q Q QQQQQQQQQQQQ Q Q Q
Sbjct: 131 QQQQLQEFYKKQQEQLHLQLLQQQQQQQQQQQQQQQQQQQQQQQQQQ 177
Score = 38.1 bits (87), Expect = 0.010
Identities = 21/49 (42%), Positives = 27/49 (55%)
Query: 98 AAARRRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSPSASTAQTAQLQ 146
A ++QQ Q+ ++QQ+Q Q QQQQQQQQQQ Q Q Q
Sbjct: 127 AVMLQQQQLQEFYKKQQEQLHLQLLQQQQQQQQQQQQQQQQQQQQQQQQ 175
>gi|22538413 forkhead box P2 isoform III [Homo sapiens]
Length = 623
Score = 68.2 bits (165), Expect = 9e-12
Identities = 36/68 (52%), Positives = 43/68 (63%)
Query: 101 RRRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSPSASTAQTAQLQPNLVSASAAVLLTL 160
+++QQQQQQQQQQQQQQQQQQQQQQQQQQQQQ P + Q Q +A L+
Sbjct: 67 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHPGKQAKEQQQQQQQQQQLAAQQLVFQ 126
Query: 161 QATVDSSQ 168
Q + Q
Sbjct: 127 QQLLQMQQ 134
Score = 66.2 bits (160), Expect = 3e-11
Identities = 36/61 (59%), Positives = 40/61 (65%)
Query: 101 RRRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSPSASTAQTAQLQPNLVSASAAVLLTL 160
+++QQQQQQQQQQQQQQQQQQQQQQQQQQQQQ A+ Q Q AA L
Sbjct: 66 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHPGKQAKEQQQQQQQQQQLAAQQLVF 125
Query: 161 Q 161
Q
Sbjct: 126 Q 126
Score = 63.2 bits (152), Expect = 3e-10
Identities = 45/111 (40%), Positives = 56/111 (50%), Gaps = 11/111 (9%)
Query: 101 RRRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQS------SPSASTAQTAQLQPNLVSASA 154
+++QQQQQQQQQQQQQQQQQQQQQQQQQQQQQ A Q Q Q ++A
Sbjct: 63 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHPGKQAKEQQQQQQQQQQLAAQQ 122
Query: 155 AV----LLTLQATVDSSQAPGSVQPAPIT-PTGEDVKPIDLTVQVEFAAAE 200
V LL +Q + I+ P G+ P+ Q + AE
Sbjct: 123 LVFQQQLLQMQQLQQQQHLLSLQRQGLISIPPGQAALPVQSLPQAGLSPAE 173
Score = 61.6 bits (148), Expect = 9e-10
Identities = 30/40 (75%), Positives = 32/40 (80%)
Query: 102 RRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSPSASTAQ 141
++QQQQQQQQQQQQQQQQQQQQQQQQQQQQQ Q
Sbjct: 60 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ 99
Score = 57.8 bits (138), Expect = 1e-08
Identities = 30/43 (69%), Positives = 30/43 (69%)
Query: 104 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSPSASTAQTAQLQ 146
Q QQQQQQQQQQQQQQQQQQQQQQQQQQ Q Q Q
Sbjct: 57 QLLQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ 99
Score = 52.8 bits (125), Expect = 4e-07
Identities = 29/48 (60%), Positives = 32/48 (66%), Gaps = 3/48 (6%)
Query: 102 RRQQQQ---QQQQQQQQQQQQQQQQQQQQQQQQQSSPSASTAQTAQLQ 146
++QQ+Q Q QQQQQQQQQQQQQQQQQQQQQQ Q Q Q
Sbjct: 48 KKQQEQLHLQLLQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ 95
Score = 51.2 bits (121), Expect = 1e-06
Identities = 26/46 (56%), Positives = 30/46 (65%)
Query: 101 RRRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSPSASTAQTAQLQ 146
+++Q+Q Q QQQQQQQQQQQQQQQQQQQQ Q Q Q
Sbjct: 48 KKQQEQLHLQLLQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ 93
Score = 41.2 bits (95), Expect = 0.001
Identities = 24/48 (50%), Positives = 28/48 (58%), Gaps = 6/48 (12%)
Query: 105 QQQQQQQQQQQQQQQ------QQQQQQQQQQQQQSSPSASTAQTAQLQ 146
QQQQ Q+ ++QQ+Q QQQQQQQQQQQQQ Q Q Q
Sbjct: 39 QQQQLQEFYKKQQEQLHLQLLQQQQQQQQQQQQQQQQQQQQQQQQQQQ 86
Score = 40.0 bits (92), Expect = 0.003
Identities = 27/88 (30%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 87 ERKVARRPAGAAAARRRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSPSASTAQTAQLQ 146
+++ + P A +++QQQQQQQ QQ QQQ Q QQ QQQQ S +
Sbjct: 94 QQQQQQHPGKQAKEQQQQQQQQQQLAAQQLVFQQQLLQMQQLQQQQHLLSLQRQGLISIP 153
Query: 147 PNLVSASAAVLLTLQATVDSSQAPGSVQ 174
P + L +Q+ + +P +Q
Sbjct: 154 PGQAA------LPVQSLPQAGLSPAEIQ 175
Score = 39.7 bits (91), Expect = 0.004
Identities = 24/47 (51%), Positives = 26/47 (55%), Gaps = 4/47 (8%)
Query: 104 QQQQQQQ----QQQQQQQQQQQQQQQQQQQQQQSSPSASTAQTAQLQ 146
QQQQ Q+ QQ+Q Q QQQQQQQQQQQQ Q Q Q
Sbjct: 39 QQQQLQEFYKKQQEQLHLQLLQQQQQQQQQQQQQQQQQQQQQQQQQQ 85
Score = 38.1 bits (87), Expect = 0.010
Identities = 21/49 (42%), Positives = 27/49 (55%)
Query: 98 AAARRRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSPSASTAQTAQLQ 146
A ++QQ Q+ ++QQ+Q Q QQQQQQQQQQ Q Q Q
Sbjct: 35 AVMLQQQQLQEFYKKQQEQLHLQLLQQQQQQQQQQQQQQQQQQQQQQQQ 83
>gi|149999352 forkhead box P2 isoform II [Homo sapiens]
Length = 740
Score = 68.2 bits (165), Expect = 9e-12
Identities = 36/68 (52%), Positives = 43/68 (63%)
Query: 101 RRRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSPSASTAQTAQLQPNLVSASAAVLLTL 160
+++QQQQQQQQQQQQQQQQQQQQQQQQQQQQQ P + Q Q +A L+
Sbjct: 184 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHPGKQAKEQQQQQQQQQQLAAQQLVFQ 243
Query: 161 QATVDSSQ 168
Q + Q
Sbjct: 244 QQLLQMQQ 251
Score = 66.2 bits (160), Expect = 3e-11
Identities = 36/61 (59%), Positives = 40/61 (65%)
Query: 101 RRRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSPSASTAQTAQLQPNLVSASAAVLLTL 160
+++QQQQQQQQQQQQQQQQQQQQQQQQQQQQQ A+ Q Q AA L
Sbjct: 183 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHPGKQAKEQQQQQQQQQQLAAQQLVF 242
Query: 161 Q 161
Q
Sbjct: 243 Q 243
Score = 63.2 bits (152), Expect = 3e-10
Identities = 45/111 (40%), Positives = 56/111 (50%), Gaps = 11/111 (9%)
Query: 101 RRRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQS------SPSASTAQTAQLQPNLVSASA 154
+++QQQQQQQQQQQQQQQQQQQQQQQQQQQQQ A Q Q Q ++A
Sbjct: 180 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHPGKQAKEQQQQQQQQQQLAAQQ 239
Query: 155 AV----LLTLQATVDSSQAPGSVQPAPIT-PTGEDVKPIDLTVQVEFAAAE 200
V LL +Q + I+ P G+ P+ Q + AE
Sbjct: 240 LVFQQQLLQMQQLQQQQHLLSLQRQGLISIPPGQAALPVQSLPQAGLSPAE 290
Score = 61.6 bits (148), Expect = 9e-10
Identities = 30/40 (75%), Positives = 32/40 (80%)
Query: 102 RRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSPSASTAQ 141
++QQQQQQQQQQQQQQQQQQQQQQQQQQQQQ Q
Sbjct: 177 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ 216
Score = 57.8 bits (138), Expect = 1e-08
Identities = 30/43 (69%), Positives = 30/43 (69%)
Query: 104 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSPSASTAQTAQLQ 146
Q QQQQQQQQQQQQQQQQQQQQQQQQQQ Q Q Q
Sbjct: 174 QLLQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ 216
Score = 52.8 bits (125), Expect = 4e-07
Identities = 29/48 (60%), Positives = 32/48 (66%), Gaps = 3/48 (6%)
Query: 102 RRQQQQ---QQQQQQQQQQQQQQQQQQQQQQQQQSSPSASTAQTAQLQ 146
++QQ+Q Q QQQQQQQQQQQQQQQQQQQQQQ Q Q Q
Sbjct: 165 KKQQEQLHLQLLQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ 212
Score = 51.2 bits (121), Expect = 1e-06
Identities = 26/46 (56%), Positives = 30/46 (65%)
Query: 101 RRRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSPSASTAQTAQLQ 146
+++Q+Q Q QQQQQQQQQQQQQQQQQQQQ Q Q Q
Sbjct: 165 KKQQEQLHLQLLQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ 210
Score = 41.2 bits (95), Expect = 0.001
Identities = 24/48 (50%), Positives = 28/48 (58%), Gaps = 6/48 (12%)
Query: 105 QQQQQQQQQQQQQQQ------QQQQQQQQQQQQQSSPSASTAQTAQLQ 146
QQQQ Q+ ++QQ+Q QQQQQQQQQQQQQ Q Q Q
Sbjct: 156 QQQQLQEFYKKQQEQLHLQLLQQQQQQQQQQQQQQQQQQQQQQQQQQQ 203
Score = 40.0 bits (92), Expect = 0.003
Identities = 27/88 (30%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 87 ERKVARRPAGAAAARRRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSPSASTAQTAQLQ 146
+++ + P A +++QQQQQQQ QQ QQQ Q QQ QQQQ S +
Sbjct: 211 QQQQQQHPGKQAKEQQQQQQQQQQLAAQQLVFQQQLLQMQQLQQQQHLLSLQRQGLISIP 270
Query: 147 PNLVSASAAVLLTLQATVDSSQAPGSVQ 174
P + L +Q+ + +P +Q
Sbjct: 271 PGQAA------LPVQSLPQAGLSPAEIQ 292
Score = 39.7 bits (91), Expect = 0.004
Identities = 24/47 (51%), Positives = 26/47 (55%), Gaps = 4/47 (8%)
Query: 104 QQQQQQQ----QQQQQQQQQQQQQQQQQQQQQQSSPSASTAQTAQLQ 146
QQQQ Q+ QQ+Q Q QQQQQQQQQQQQ Q Q Q
Sbjct: 156 QQQQLQEFYKKQQEQLHLQLLQQQQQQQQQQQQQQQQQQQQQQQQQQ 202
Score = 38.1 bits (87), Expect = 0.010
Identities = 21/49 (42%), Positives = 27/49 (55%)
Query: 98 AAARRRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSPSASTAQTAQLQ 146
A ++QQ Q+ ++QQ+Q Q QQQQQQQQQQ Q Q Q
Sbjct: 152 AVMLQQQQLQEFYKKQQEQLHLQLLQQQQQQQQQQQQQQQQQQQQQQQQ 200
>gi|33457336 chromosome 14 open reading frame 4 [Homo sapiens]
Length = 796
Score = 67.8 bits (164), Expect = 1e-11
Identities = 68/203 (33%), Positives = 88/203 (43%), Gaps = 30/203 (14%)
Query: 56 TGHRLCSVH--FQGGRKTYT---VRVPTIFPLRGVNERKVARRPAGAAAARRRQQQQQQQ 110
T +L H FQ GR V V T+ L A A AAAA ++QQQQQQQ
Sbjct: 53 TARQLKRAHGCFQDGRSPGPPPPVGVKTV-ALSAKEAAAAAAAAAAAAAAAQQQQQQQQQ 111
Query: 111 QQQQQQQQQQQQQQQQQQQQQQSSPSASTAQTAQLQPNLVSASAAVLLTLQATVDSSQAP 170
QQQQQQQQQQQQQQQQ SS A A + L+ +SA+AA A V+ ++
Sbjct: 112 QQQQQQQQQQQQQQQQLNHVDGSSKPAVLAAPSGLERYGLSAAAAAAAAAAAAVE-QRSR 170
Query: 171 GSVQPAPIT----------------------PTGEDVKPIDLTVQVEFAAAEGAAAAAAA 208
P P++ PT E+ P +L Q +++ A+ A+
Sbjct: 171 FEYPPPPVSLGSSSHTARLPNGLGGPNGFPKPTPEEGPP-ELNRQSPNSSSAAASVASRR 229
Query: 209 SELQAATAGLEAAECPMGPQLVV 231
GL GPQL V
Sbjct: 230 GTHGGLVTGLPNPGGGGGPQLTV 252
>gi|110347429 mediator complex subunit 12 [Homo sapiens]
Length = 2177
Score = 66.6 bits (161), Expect = 3e-11
Identities = 40/83 (48%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Query: 101 RRRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSPSASTAQTAQLQPNLVSASAAVLLTL 160
R++QQQQQQQQQQQQQQQQQQQQQQQQ QQQQ +A Q QP
Sbjct: 2089 RQQQQQQQQQQQQQQQQQQQQQQQQQQHQQQQQQQAAPPQPQPQSQPQFQRQGLQQTQQQ 2148
Query: 161 QATV----DSSQAPGSVQPAPIT 179
Q T Q + QP P T
Sbjct: 2149 QQTAALVRQLQQQLSNTQPQPST 2171
Score = 64.7 bits (156), Expect = 1e-10
Identities = 50/136 (36%), Positives = 58/136 (42%), Gaps = 4/136 (2%)
Query: 46 SGCFSTFQPTTGHRLCSVH-FQGGRKTYTVRVPTIFPLRGVNERKVARRPAGAAAARRRQ 104
SG PT GH L S F T + T+ P+ + R A +++Q
Sbjct: 1996 SGYVHQQAPTYGHGLTSTQRFSHQTLQQTPMISTMTPMSAQGVQAGVRSTAILPEQQQQQ 2055
Query: 105 QQQQQQQQQQQQQQQQQQQQQ---QQQQQQQSSPSASTAQTAQLQPNLVSASAAVLLTLQ 161
QQQQQQQQQQQQQQQQQQQQQ +QQQQQQ Q Q Q Q
Sbjct: 2056 QQQQQQQQQQQQQQQQQQQQQYHIRQQQQQQILRQQQQQQQQQQQQQQQQQQQQQQQQQQ 2115
Query: 162 ATVDSSQAPGSVQPAP 177
Q QP P
Sbjct: 2116 HQQQQQQQAAPPQPQP 2131
Score = 63.9 bits (154), Expect = 2e-10
Identities = 40/77 (51%), Positives = 43/77 (55%), Gaps = 3/77 (3%)
Query: 101 RRRQQQQ---QQQQQQQQQQQQQQQQQQQQQQQQQSSPSASTAQTAQLQPNLVSASAAVL 157
R++QQQQ QQQQQQQQQQQQQQQQQQQQQQQQQ Q A QP S
Sbjct: 2080 RQQQQQQILRQQQQQQQQQQQQQQQQQQQQQQQQQQHQQQQQQQAAPPQPQPQSQPQFQR 2139
Query: 158 LTLQATVDSSQAPGSVQ 174
LQ T Q V+
Sbjct: 2140 QGLQQTQQQQQTAALVR 2156
Score = 58.2 bits (139), Expect = 1e-08
Identities = 36/92 (39%), Positives = 52/92 (56%), Gaps = 5/92 (5%)
Query: 80 FPLRGVNERKVARRPAGAAAARRRQQQQQQQQQQQQQQQQQQQQQQQ---QQQQQQSSPS 136
+ +R ++++ R+ +++QQQQQQQQQQQQQQQ QQQQQQQ Q Q QS P
Sbjct: 2077 YHIRQQQQQQILRQQQQQQQQQQQQQQQQQQQQQQQQQQHQQQQQQQAAPPQPQPQSQPQ 2136
Query: 137 ASTAQTAQLQPNLVSASAAVLLTLQATVDSSQ 168
Q Q +AA++ LQ + ++Q
Sbjct: 2137 FQRQGLQQTQQQ--QQTAALVRQLQQQLSNTQ 2166
Score = 30.0 bits (66), Expect = 2.8
Identities = 16/35 (45%), Positives = 19/35 (54%)
Query: 104 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSPSAS 138
Q+Q QQ QQQQQ +Q QQQ Q PS +
Sbjct: 2138 QRQGLQQTQQQQQTAALVRQLQQQLSNTQPQPSTN 2172
Score = 28.5 bits (62), Expect = 8.1
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 102 RRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSPSASTA-QTAQ 144
R+QQ Q Q+ +QQ QQ Q Q Q +PS+S QT+Q
Sbjct: 1899 RQQQPAVPQGQRLRQQLQQSQGMLGQSSVHQMTPSSSYGLQTSQ 1942
>gi|48255900 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a2 isoform a [Homo sapiens]
Length = 1590
Score = 64.7 bits (156), Expect = 1e-10
Identities = 74/243 (30%), Positives = 99/243 (40%), Gaps = 47/243 (19%)
Query: 107 QQQQQQQQQQQQQQQQQQQQQQQQQQSSPSASTAQTAQLQPNLVSASAAVLLTLQATVDS 166
QQQQQQQQQQQQQQQQQQQQQQQ QQ P T Q Q QP LV+ +
Sbjct: 216 QQQQQQQQQQQQQQQQQQQQQQQPQQQPPQPQTQQ--QQQPALVNYNRP-----SGPGPE 268
Query: 167 SQAPGSVQPAPI-TPTGEDVKPIDLTVQVEFAAAEGAAAAAAAS-------ELQAATAGL 218
P + Q P+ P G Q AA G + A +LQ + +
Sbjct: 269 LSGPSTPQKLPVPAPGGRPSPAPPAAAQPPAAAVPGPSVPQPAPGQPSPVLQLQQKQSRI 328
Query: 219 EAAECPMGPQLVVVGE-----------------EGFPDTGSDHSYSLSSGTTEEELLRKL 261
+ P G V + + E P GS + T E + LR L
Sbjct: 329 SPIQKPQGLDPVEILQEREYRLQARIAHRIQELENLP--GSLPPDLRTKATVELKALRLL 386
Query: 262 NEQR----DILALME--------VKMKEMKGSIRHLRLTEAKLREELREKDRLLAMAVIR 309
N QR +++A M + K K S R L EA++ E+L ++ ++ R
Sbjct: 387 NFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQ-TLREARMTEKLEKQQKIEQERKRR 445
Query: 310 KKH 312
+KH
Sbjct: 446 QKH 448
>gi|48255898 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a2 isoform b [Homo sapiens]
Length = 1572
Score = 64.7 bits (156), Expect = 1e-10
Identities = 74/243 (30%), Positives = 99/243 (40%), Gaps = 47/243 (19%)
Query: 107 QQQQQQQQQQQQQQQQQQQQQQQQQQSSPSASTAQTAQLQPNLVSASAAVLLTLQATVDS 166
QQQQQQQQQQQQQQQQQQQQQQQ QQ P T Q Q QP LV+ +
Sbjct: 216 QQQQQQQQQQQQQQQQQQQQQQQPQQQPPQPQTQQ--QQQPALVNYNRP-----SGPGPE 268
Query: 167 SQAPGSVQPAPI-TPTGEDVKPIDLTVQVEFAAAEGAAAAAAAS-------ELQAATAGL 218
P + Q P+ P G Q AA G + A +LQ + +
Sbjct: 269 LSGPSTPQKLPVPAPGGRPSPAPPAAAQPPAAAVPGPSVPQPAPGQPSPVLQLQQKQSRI 328
Query: 219 EAAECPMGPQLVVVGE-----------------EGFPDTGSDHSYSLSSGTTEEELLRKL 261
+ P G V + + E P GS + T E + LR L
Sbjct: 329 SPIQKPQGLDPVEILQEREYRLQARIAHRIQELENLP--GSLPPDLRTKATVELKALRLL 386
Query: 262 NEQR----DILALME--------VKMKEMKGSIRHLRLTEAKLREELREKDRLLAMAVIR 309
N QR +++A M + K K S R L EA++ E+L ++ ++ R
Sbjct: 387 NFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQ-TLREARMTEKLEKQQKIEQERKRR 445
Query: 310 KKH 312
+KH
Sbjct: 446 QKH 448
>gi|32307124 nuclear receptor coactivator 3 isoform b [Homo sapiens]
Length = 1420
Score = 63.9 bits (154), Expect = 2e-10
Identities = 39/81 (48%), Positives = 49/81 (60%), Gaps = 8/81 (9%)
Query: 77 PTIFPLRG-VNERKVARRPAGAAAARRRQQ-------QQQQQQQQQQQQQQQQQQQQQQQ 128
P + P +G +N + VA+R + RQQ QQQQQQQQQQQQQQQQQQQQQQQ
Sbjct: 1208 PMMQPQQGFLNAQMVAQRSRELLSHHFRQQRVAMMMQQQQQQQQQQQQQQQQQQQQQQQQ 1267
Query: 129 QQQQSSPSASTAQTAQLQPNL 149
QQQQ + + S P++
Sbjct: 1268 QQQQQTQAFSPPPNVTASPSM 1288
Score = 50.4 bits (119), Expect = 2e-06
Identities = 26/45 (57%), Positives = 32/45 (71%)
Query: 101 RRRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSPSASTAQTAQL 145
+++QQQQQQQQQQQQQQQQQQQQQQ Q + +AS + L
Sbjct: 1248 QQQQQQQQQQQQQQQQQQQQQQQQQTQAFSPPPNVTASPSMDGLL 1292
Score = 45.1 bits (105), Expect = 8e-05
Identities = 40/138 (28%), Positives = 46/138 (33%), Gaps = 65/138 (47%)
Query: 80 FPLRGVNERKVARRP-------------------------------------AGAAAARR 102
FPL+G++ R RP AG AA R
Sbjct: 1148 FPLQGMHPRANIMRPRTNTPKQLRMQLQQRLQGQQFLNQSRQALELKMENPTAGGAAVMR 1207
Query: 103 RQQQQQQ----------------------------QQQQQQQQQQQQQQQQQQQQQQQSS 134
Q QQ QQQQQQQQQQQQQQQQQQQQQQ
Sbjct: 1208 PMMQPQQGFLNAQMVAQRSRELLSHHFRQQRVAMMMQQQQQQQQQQQQQQQQQQQQQQQQ 1267
Query: 135 PSASTAQTAQLQPNLVSA 152
Q PN+ ++
Sbjct: 1268 QQQQQTQAFSPPPNVTAS 1285
Score = 43.1 bits (100), Expect = 3e-04
Identities = 28/83 (33%), Positives = 37/83 (44%)
Query: 95 AGAAAARRRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSPSASTAQTAQLQPNLVSASA 154
A A R R+ +QQ+ QQQQQQQQQQQQQ Q Q Q + S
Sbjct: 1219 AQMVAQRSRELLSHHFRQQRVAMMMQQQQQQQQQQQQQQQQQQQQQQQQQQQQQTQAFSP 1278
Query: 155 AVLLTLQATVDSSQAPGSVQPAP 177
+T ++D A ++ AP
Sbjct: 1279 PPNVTASPSMDGLLAGPTMPQAP 1301
>gi|239757877 PREDICTED: FERM and PDZ domain containing 3 [Homo
sapiens]
Length = 1662
Score = 63.5 bits (153), Expect = 2e-10
Identities = 39/67 (58%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 93 RPAGAAAARRRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSPSASTAQTAQLQPNLVSA 152
R A + AR QQQQQQQQQQQQQQQQQQQQQQQQQQQ A+ A A P
Sbjct: 1590 RAAEESTARNLNQQQQQQQQQQQQQQQQQQQQQQQQQQQ----VAAAAGAATEHPPGSPT 1645
Query: 153 SAAVLLT 159
SA V+ T
Sbjct: 1646 SATVMST 1652
Score = 45.8 bits (107), Expect = 5e-05
Identities = 25/56 (44%), Positives = 31/56 (55%)
Query: 87 ERKVARRPAGAAAARRRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSPSASTAQT 142
E AR +++QQQQQQQQQQQQQQQQQQQ + P + T+ T
Sbjct: 1593 EESTARNLNQQQQQQQQQQQQQQQQQQQQQQQQQQQVAAAAGAATEHPPGSPTSAT 1648
Score = 41.6 bits (96), Expect = 0.001
Identities = 22/42 (52%), Positives = 25/42 (59%)
Query: 80 FPLRGVNERKVARRPAGAAAARRRQQQQQQQQQQQQQQQQQQ 121
F LR E +++QQQQQQQQQQQQQQQQQQ
Sbjct: 1587 FLLRAAEESTARNLNQQQQQQQQQQQQQQQQQQQQQQQQQQQ 1628
Score = 29.3 bits (64), Expect = 4.7
Identities = 14/43 (32%), Positives = 25/43 (58%)
Query: 71 TYTVRVPTIFPLRGVNERKVARRPAGAAAARRRQQQQQQQQQQ 113
T+ +R R +N+++ ++ +++QQQQQQQQQQ
Sbjct: 1586 TFLLRAAEESTARNLNQQQQQQQQQQQQQQQQQQQQQQQQQQQ 1628
>gi|89060961 PREDICTED: FERM and PDZ domain containing 3 [Homo
sapiens]
Length = 1810
Score = 63.5 bits (153), Expect = 2e-10
Identities = 39/67 (58%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 93 RPAGAAAARRRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSPSASTAQTAQLQPNLVSA 152
R A + AR QQQQQQQQQQQQQQQQQQQQQQQQQQQ A+ A A P
Sbjct: 1738 RAAEESTARNLNQQQQQQQQQQQQQQQQQQQQQQQQQQQ----VAAAAGAATEHPPGSPT 1793
Query: 153 SAAVLLT 159
SA V+ T
Sbjct: 1794 SATVMST 1800
Score = 45.8 bits (107), Expect = 5e-05
Identities = 25/56 (44%), Positives = 31/56 (55%)
Query: 87 ERKVARRPAGAAAARRRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSPSASTAQT 142
E AR +++QQQQQQQQQQQQQQQQQQQ + P + T+ T
Sbjct: 1741 EESTARNLNQQQQQQQQQQQQQQQQQQQQQQQQQQQVAAAAGAATEHPPGSPTSAT 1796
Score = 41.6 bits (96), Expect = 0.001
Identities = 22/42 (52%), Positives = 25/42 (59%)
Query: 80 FPLRGVNERKVARRPAGAAAARRRQQQQQQQQQQQQQQQQQQ 121
F LR E +++QQQQQQQQQQQQQQQQQQ
Sbjct: 1735 FLLRAAEESTARNLNQQQQQQQQQQQQQQQQQQQQQQQQQQQ 1776
Score = 29.3 bits (64), Expect = 4.7
Identities = 14/43 (32%), Positives = 25/43 (58%)
Query: 71 TYTVRVPTIFPLRGVNERKVARRPAGAAAARRRQQQQQQQQQQ 113
T+ +R R +N+++ ++ +++QQQQQQQQQQ
Sbjct: 1734 TFLLRAAEESTARNLNQQQQQQQQQQQQQQQQQQQQQQQQQQQ 1776
>gi|89059963 PREDICTED: FERM and PDZ domain containing 3 [Homo
sapiens]
Length = 1810
Score = 63.5 bits (153), Expect = 2e-10
Identities = 39/67 (58%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 93 RPAGAAAARRRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSPSASTAQTAQLQPNLVSA 152
R A + AR QQQQQQQQQQQQQQQQQQQQQQQQQQQ A+ A A P
Sbjct: 1738 RAAEESTARNLNQQQQQQQQQQQQQQQQQQQQQQQQQQQ----VAAAAGAATEHPPGSPT 1793
Query: 153 SAAVLLT 159
SA V+ T
Sbjct: 1794 SATVMST 1800
Score = 45.8 bits (107), Expect = 5e-05
Identities = 25/56 (44%), Positives = 31/56 (55%)
Query: 87 ERKVARRPAGAAAARRRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSPSASTAQT 142
E AR +++QQQQQQQQQQQQQQQQQQQ + P + T+ T
Sbjct: 1741 EESTARNLNQQQQQQQQQQQQQQQQQQQQQQQQQQQVAAAAGAATEHPPGSPTSAT 1796
Score = 41.6 bits (96), Expect = 0.001
Identities = 22/42 (52%), Positives = 25/42 (59%)
Query: 80 FPLRGVNERKVARRPAGAAAARRRQQQQQQQQQQQQQQQQQQ 121
F LR E +++QQQQQQQQQQQQQQQQQQ
Sbjct: 1735 FLLRAAEESTARNLNQQQQQQQQQQQQQQQQQQQQQQQQQQQ 1776
Score = 29.3 bits (64), Expect = 4.7
Identities = 14/43 (32%), Positives = 25/43 (58%)
Query: 71 TYTVRVPTIFPLRGVNERKVARRPAGAAAARRRQQQQQQQQQQ 113
T+ +R R +N+++ ++ +++QQQQQQQQQQ
Sbjct: 1734 TFLLRAAEESTARNLNQQQQQQQQQQQQQQQQQQQQQQQQQQQ 1776
>gi|55956910 meningioma 1 [Homo sapiens]
Length = 1320
Score = 63.5 bits (153), Expect = 2e-10
Identities = 42/83 (50%), Positives = 51/83 (61%), Gaps = 10/83 (12%)
Query: 72 YTVRVPTIFPLRGVNERKVARRPAGAAAARRRQQQQQQQQQQQQQQQQQQQQQQQQQQQQ 131
+T VP FP + PA + ++QQQQQQQQQQQQQQQQQQQQQQQQQQ+Q
Sbjct: 498 FTPPVPDSFP-----SGPPLQHPAPDHQSLQQQQQQQQQQQQQQQQQQQQQQQQQQQQRQ 552
Query: 132 QSS----PSASTAQTAQL-QPNL 149
++ AS Q +L QPNL
Sbjct: 553 NAALMIKQMASRNQQQRLRQPNL 575
Score = 51.2 bits (121), Expect = 1e-06
Identities = 48/150 (32%), Positives = 58/150 (38%), Gaps = 13/150 (8%)
Query: 108 QQQQQQQQQQQQQQQQQQQQQQQQQSSPSASTAQTAQLQPNLVSASAAVLLTLQATVDSS 167
Q QQQQQQQQQQQQQQQQQQQQQQ A + + S + L Q +
Sbjct: 520 QSLQQQQQQQQQQQQQQQQQQQQQQQQQQQQRQNAALMIKQMASRNQQQRLR-QPNLAQL 578
Query: 168 QAPGSVQPAPITPTGEDVKPIDLTVQVEFAAAEGAAAAA-------AASELQAATAGLEA 220
PG V + G P+ Q F G+ A A L +A
Sbjct: 579 GHPGDVGQGGLVHGG----PVGGLAQPNFEREGGSTGAGRLGTFEQQAPHLAQESAWFSG 634
Query: 221 AECPMGPQLV-VVGEEGFPDTGSDHSYSLS 249
P G L +G G P H SL+
Sbjct: 635 PHPPPGDLLPRRMGGSGLPADCGPHDPSLA 664
Score = 37.0 bits (84), Expect = 0.023
Identities = 29/100 (29%), Positives = 36/100 (36%)
Query: 94 PAGAAAARRRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSPSASTAQTAQLQPNLVSAS 153
P +A R + Q QQQ QQQQQ QQQQQQ A+ P + S
Sbjct: 271 PGASAMPRAAGMVGLSKMHAQPPQQQPQQQQQPQQQQQQHGVFFERFSGARKMPVGLEPS 330
Query: 154 AAVLLTLQATVDSSQAPGSVQPAPITPTGEDVKPIDLTVQ 193
L + P QP P + P L V+
Sbjct: 331 VGSRHPLMQPPQQAPPPPQQQPPQQPPQQQPPPPPGLLVR 370
Score = 36.6 bits (83), Expect = 0.030
Identities = 27/79 (34%), Positives = 31/79 (39%), Gaps = 10/79 (12%)
Query: 46 SGCFSTFQPTTGHRLCSVHFQGGRKTYTVRVPTIFPLRGVNERKVARRPAGAAAARRRQQ 105
SG F F P+ H+ GR+ P R AG +
Sbjct: 241 SGHFDMFSPSDSEGQLP-HYAAGRQV---------PGGAFPGASAMPRAAGMVGLSKMHA 290
Query: 106 QQQQQQQQQQQQQQQQQQQ 124
Q QQQ QQQQQ QQQQQQ
Sbjct: 291 QPPQQQPQQQQQPQQQQQQ 309
Score = 35.8 bits (81), Expect = 0.051
Identities = 18/41 (43%), Positives = 25/41 (60%)
Query: 101 RRRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSPSASTAQ 141
+++QQQQQQQQQQQ+Q +Q + QQQ + AQ
Sbjct: 537 QQQQQQQQQQQQQQRQNAALMIKQMASRNQQQRLRQPNLAQ 577
>gi|38787935 BMP-2 inducible kinase isoform a [Homo sapiens]
Length = 1161
Score = 62.8 bits (151), Expect = 4e-10
Identities = 62/201 (30%), Positives = 83/201 (41%), Gaps = 14/201 (6%)
Query: 104 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSPSASTAQTAQLQPNLVSASAAVLLTLQAT 163
QQQQQQQQQQQQQQQQQQQQQQQQQQQ Q A +Q + +L Q
Sbjct: 460 QQQQQQQQQQQQQQQQQQQQQQQQQQQHHHHHHHHLLQDAYMQQYQHATQQQQMLQQQFL 519
Query: 164 VDSSQAPGSVQPAPITPTGEDVKPIDLTVQVEFAAAEGAAAAAAASELQAATAGLEAAEC 223
+ S QP P + P Q + A + A Q A+ +
Sbjct: 520 MHS-----VYQPQPSASQYPTMMP-----QYQQAFFQQQMLAQHQPSQQQASPEYLTSPQ 569
Query: 224 PMGPQLVVVGEEGFPDTGS--DHSYSLSSGTTEEELLRKLNEQRDILALMEVKMKEMKGS 281
P LV G+ D SYS + ++E + Q++I ++ G
Sbjct: 570 EFSPALVSYTSSLPAQVGTIMDSSYSANRSVADKEAIANFTNQKNISNPPDMSGWNPFGE 629
Query: 282 IRHLRLTEAKLREELREKDRL 302
+LTE +L + RE D L
Sbjct: 630 DNFSKLTEEELLD--REFDLL 648
Score = 45.1 bits (105), Expect = 8e-05
Identities = 23/40 (57%), Positives = 24/40 (60%)
Query: 102 RRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSPSASTAQ 141
R QQ Q + QQQQQQQQQQQQQQQQQQ Q
Sbjct: 447 RLQQLHLQHRHPHQQQQQQQQQQQQQQQQQQQQQQQQQQQ 486
Score = 39.3 bits (90), Expect = 0.005
Identities = 20/38 (52%), Positives = 21/38 (55%)
Query: 107 QQQQQQQQQQQQQQQQQQQQQQQQQQSSPSASTAQTAQ 144
QQ Q + QQQQQQQQQQQQQQQ Q Q
Sbjct: 449 QQLHLQHRHPHQQQQQQQQQQQQQQQQQQQQQQQQQQQ 486
Score = 37.4 bits (85), Expect = 0.017
Identities = 23/48 (47%), Positives = 24/48 (50%), Gaps = 5/48 (10%)
Query: 104 QQQQQ-----QQQQQQQQQQQQQQQQQQQQQQQQSSPSASTAQTAQLQ 146
QQ QQ QQ Q + QQQQQQQQQQQQQ Q Q Q
Sbjct: 439 QQLQQGDWRLQQLHLQHRHPHQQQQQQQQQQQQQQQQQQQQQQQQQQQ 486
Score = 34.7 bits (78), Expect = 0.11
Identities = 31/110 (28%), Positives = 44/110 (40%), Gaps = 16/110 (14%)
Query: 53 QPTTGHRLCSVHFQGGRKTYTVRVPTIFPLRGVNERKVARRPAGAAAARRRQQQQQQQ-- 110
QP HR+ QG + + + P + +++ ++ +++QQQQQQ
Sbjct: 430 QPPQQHRVLQQLQQGDWRLQQLHLQHRHPHQQQQQQQQQQQQQQQQQQQQQQQQQQQHHH 489
Query: 111 -------QQQQQQQQQQQQQQQQQQQQQ-------QSSPSASTAQTAQLQ 146
Q QQ Q QQQQ QQQ Q PSAS T Q
Sbjct: 490 HHHHHLLQDAYMQQYQHATQQQQMLQQQFLMHSVYQPQPSASQYPTMMPQ 539
>gi|38787904 BMP-2 inducible kinase isoform b [Homo sapiens]
Length = 662
Score = 62.8 bits (151), Expect = 4e-10
Identities = 62/201 (30%), Positives = 83/201 (41%), Gaps = 14/201 (6%)
Query: 104 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSPSASTAQTAQLQPNLVSASAAVLLTLQAT 163
QQQQQQQQQQQQQQQQQQQQQQQQQQQ Q A +Q + +L Q
Sbjct: 460 QQQQQQQQQQQQQQQQQQQQQQQQQQQHHHHHHHHLLQDAYMQQYQHATQQQQMLQQQFL 519
Query: 164 VDSSQAPGSVQPAPITPTGEDVKPIDLTVQVEFAAAEGAAAAAAASELQAATAGLEAAEC 223
+ S QP P + P Q + A + A Q A+ +
Sbjct: 520 MHS-----VYQPQPSASQYPTMMP-----QYQQAFFQQQMLAQHQPSQQQASPEYLTSPQ 569
Query: 224 PMGPQLVVVGEEGFPDTGS--DHSYSLSSGTTEEELLRKLNEQRDILALMEVKMKEMKGS 281
P LV G+ D SYS + ++E + Q++I ++ G
Sbjct: 570 EFSPALVSYTSSLPAQVGTIMDSSYSANRSVADKEAIANFTNQKNISNPPDMSGWNPFGE 629
Query: 282 IRHLRLTEAKLREELREKDRL 302
+LTE +L + RE D L
Sbjct: 630 DNFSKLTEEELLD--REFDLL 648
Score = 45.1 bits (105), Expect = 8e-05
Identities = 23/40 (57%), Positives = 24/40 (60%)
Query: 102 RRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSPSASTAQ 141
R QQ Q + QQQQQQQQQQQQQQQQQQ Q
Sbjct: 447 RLQQLHLQHRHPHQQQQQQQQQQQQQQQQQQQQQQQQQQQ 486
Score = 39.3 bits (90), Expect = 0.005
Identities = 20/38 (52%), Positives = 21/38 (55%)
Query: 107 QQQQQQQQQQQQQQQQQQQQQQQQQQSSPSASTAQTAQ 144
QQ Q + QQQQQQQQQQQQQQQ Q Q
Sbjct: 449 QQLHLQHRHPHQQQQQQQQQQQQQQQQQQQQQQQQQQQ 486
Score = 37.4 bits (85), Expect = 0.017
Identities = 23/48 (47%), Positives = 24/48 (50%), Gaps = 5/48 (10%)
Query: 104 QQQQQ-----QQQQQQQQQQQQQQQQQQQQQQQQSSPSASTAQTAQLQ 146
QQ QQ QQ Q + QQQQQQQQQQQQQ Q Q Q
Sbjct: 439 QQLQQGDWRLQQLHLQHRHPHQQQQQQQQQQQQQQQQQQQQQQQQQQQ 486
Score = 34.7 bits (78), Expect = 0.11
Identities = 31/110 (28%), Positives = 44/110 (40%), Gaps = 16/110 (14%)
Query: 53 QPTTGHRLCSVHFQGGRKTYTVRVPTIFPLRGVNERKVARRPAGAAAARRRQQQQQQQ-- 110
QP HR+ QG + + + P + +++ ++ +++QQQQQQ
Sbjct: 430 QPPQQHRVLQQLQQGDWRLQQLHLQHRHPHQQQQQQQQQQQQQQQQQQQQQQQQQQQHHH 489
Query: 111 -------QQQQQQQQQQQQQQQQQQQQQ-------QSSPSASTAQTAQLQ 146
Q QQ Q QQQQ QQQ Q PSAS T Q
Sbjct: 490 HHHHHLLQDAYMQQYQHATQQQQMLQQQFLMHSVYQPQPSASQYPTMMPQ 539
>gi|32307126 nuclear receptor coactivator 3 isoform a [Homo sapiens]
Length = 1424
Score = 62.4 bits (150), Expect = 5e-10
Identities = 36/72 (50%), Positives = 44/72 (61%), Gaps = 7/72 (9%)
Query: 85 VNERKVARRPAGAAAARRRQQ-------QQQQQQQQQQQQQQQQQQQQQQQQQQQSSPSA 137
+N + VA+R + RQQ QQQQQQQQQQQQQQQQQQQQQQQQQQQ + +
Sbjct: 1221 LNAQMVAQRSRELLSHHFRQQRVAMMMQQQQQQQQQQQQQQQQQQQQQQQQQQQQQTQAF 1280
Query: 138 STAQTAQLQPNL 149
S P++
Sbjct: 1281 SPPPNVTASPSM 1292
Score = 50.4 bits (119), Expect = 2e-06
Identities = 26/45 (57%), Positives = 32/45 (71%)
Query: 101 RRRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSPSASTAQTAQL 145
+++QQQQQQQQQQQQQQQQQQQQQQ Q + +AS + L
Sbjct: 1252 QQQQQQQQQQQQQQQQQQQQQQQQQTQAFSPPPNVTASPSMDGLL 1296
Score = 43.1 bits (100), Expect = 3e-04
Identities = 28/83 (33%), Positives = 37/83 (44%)
Query: 95 AGAAAARRRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSPSASTAQTAQLQPNLVSASA 154
A A R R+ +QQ+ QQQQQQQQQQQQQ Q Q Q + S
Sbjct: 1223 AQMVAQRSRELLSHHFRQQRVAMMMQQQQQQQQQQQQQQQQQQQQQQQQQQQQQTQAFSP 1282
Query: 155 AVLLTLQATVDSSQAPGSVQPAP 177
+T ++D A ++ AP
Sbjct: 1283 PPNVTASPSMDGLLAGPTMPQAP 1305
Score = 32.0 bits (71), Expect = 0.73
Identities = 25/79 (31%), Positives = 28/79 (35%), Gaps = 19/79 (24%)
Query: 87 ERKVARRPAGAAAARRRQQQQQQQQQQQ-------------------QQQQQQQQQQQQQ 127
E K+ AG AA R Q Q QQ +QQ+ QQQQ
Sbjct: 1192 ELKMENPTAGGAAVMRPMMQPQVSSQQGFLNAQMVAQRSRELLSHHFRQQRVAMMMQQQQ 1251
Query: 128 QQQQQSSPSASTAQTAQLQ 146
QQQQQ Q Q Q
Sbjct: 1252 QQQQQQQQQQQQQQQQQQQ 1270
Score = 30.8 bits (68), Expect = 1.6
Identities = 19/72 (26%), Positives = 33/72 (45%), Gaps = 3/72 (4%)
Query: 80 FPLRGVNERKVARRPAGAAAARRRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSPSAST 139
FPL+G++ R RP +Q + Q QQ+ Q QQ Q +Q + + + + +
Sbjct: 1148 FPLQGMHPRANIMRP---RTNTPKQLRMQLQQRLQGQQFLNQSRQALELKMENPTAGGAA 1204
Query: 140 AQTAQLQPNLVS 151
+QP + S
Sbjct: 1205 VMRPMMQPQVSS 1216
>gi|32307128 nuclear receptor coactivator 6 [Homo sapiens]
Length = 2063
Score = 61.6 bits (148), Expect = 9e-10
Identities = 38/75 (50%), Positives = 44/75 (58%), Gaps = 4/75 (5%)
Query: 104 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSPSASTAQTAQLQPNLVSASAAVLLTLQAT 163
Q QQQQQQQQQQQQQQQQQQQQQQQQQ Q+ P Q Q QP + +
Sbjct: 259 QLQQQQQQQQQQQQQQQQQQQQQQQQQLQARP---PQQHQQQQPQGIRPQFTAPTQVPVP 315
Query: 164 VDSSQAP-GSVQPAP 177
+Q P G++QP P
Sbjct: 316 PGWNQLPSGALQPPP 330
Score = 57.8 bits (138), Expect = 1e-08
Identities = 37/86 (43%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 60 LCSVHFQGGRKTYTVRVPTIFPLRGVNERKVARRPAGAAAARRRQQQQQQQQQQQQQQQQ 119
L +H Q P P++ V+ + PA +++QQQQQQQQQQQQQQQQ
Sbjct: 221 LSGLHIQQQSHPSGSLAPPHHPMQPVSVNR-QMNPANFPQLQQQQQQQQQQQQQQQQQQQ 279
Query: 120 QQQQQQQQ----QQQQQSSPSASTAQ 141
QQQQQQ Q QQ QQ P Q
Sbjct: 280 QQQQQQLQARPPQQHQQQQPQGIRPQ 305
Score = 49.7 bits (117), Expect = 3e-06
Identities = 26/46 (56%), Positives = 30/46 (65%)
Query: 101 RRRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSPSASTAQTAQLQ 146
+++QQQQQQQQQQQQQQQQQ Q + QQ QQQ TA Q
Sbjct: 266 QQQQQQQQQQQQQQQQQQQQLQARPPQQHQQQQPQGIRPQFTAPTQ 311
Score = 44.7 bits (104), Expect = 1e-04
Identities = 50/182 (27%), Positives = 70/182 (38%), Gaps = 35/182 (19%)
Query: 77 PTIFPLRGVNERKVARRPAGAA--AARRRQQQQQQQQQQQQQQQQ-----QQQQQQQQQQ 129
P +P + V +R + + P A Q QQQ Q Q QQQQ Q Q QQQQQQ
Sbjct: 970 PPGYPSQPVEQRPLQQMPPQLMQHVAPPPQPPQQQPQPQLPQQQQPPPPSQPQSQQQQQQ 1029
Query: 130 QQQ----------------------SSPSASTAQTAQLQPNLVSASAAVLLTLQATVDSS 167
QQQ P +Q P S S V+++LQ
Sbjct: 1030 QQQMMMMLMMQQDPKSVRLPVSQNVHPPRGPLNPDSQRMPMQQSGSVPVMVSLQGPASVP 1089
Query: 168 QAPGSVQ-PAPI-TPTGEDVKPIDLTVQVEFAAAEGAAAAAAASELQAATAGLEAAECPM 225
+P + P P+ TP G + + + + ++ A A+ E +G EA P
Sbjct: 1090 PSPDKQRMPMPVNTPLGSNSRKMVYQESPQNPSSSPLAEMASLPE----ASGSEAPSVPG 1145
Query: 226 GP 227
GP
Sbjct: 1146 GP 1147
Score = 34.7 bits (78), Expect = 0.11
Identities = 27/94 (28%), Positives = 32/94 (34%), Gaps = 9/94 (9%)
Query: 94 PAGAAAARRRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSPSASTAQTAQLQPNLVSAS 153
P+G+ A Q +Q Q QQQQQQQQQQ Q Q Q
Sbjct: 232 PSGSLAPPHHPMQPVSVNRQMNPANFPQLQQQQQQQQQQQQQQQQQQQQQQQQQ------ 285
Query: 154 AAVLLTLQATVDSSQAPGSVQPAPITPTGEDVKP 187
L Q P ++P PT V P
Sbjct: 286 ---LQARPPQQHQQQQPQGIRPQFTAPTQVPVPP 316
Score = 31.6 bits (70), Expect = 0.96
Identities = 26/83 (31%), Positives = 35/83 (42%), Gaps = 10/83 (12%)
Query: 101 RRRQQQQQQQQQQ---------QQQQQQQQQQQQQQQQQQQSSPSASTAQTAQLQPNLVS 151
+++QQQQQQQQQQ QQQQ Q + Q Q P + + LQP
Sbjct: 273 QQQQQQQQQQQQQLQARPPQQHQQQQPQGIRPQFTAPTQVPVPPGWNQLPSGALQPPPAQ 332
Query: 152 ASAAVLLTLQATVDSSQAPGSVQ 174
S + Q + PG +Q
Sbjct: 333 GSLGTMTANQGW-KKAPLPGPMQ 354
>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
sapiens]
Length = 5537
Score = 60.1 bits (144), Expect = 3e-09
Identities = 44/112 (39%), Positives = 55/112 (49%), Gaps = 17/112 (15%)
Query: 104 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSPSASTAQTAQLQPNLVSASAAVLLTLQ-- 161
QQQQQQQQ QQQQQQQ QQQQQQ QQQQQ Q Q Q L++ S +L Q
Sbjct: 3932 QQQQQQQQLQQQQQQQLQQQQQQLQQQQQQQQQQFQQQQQQQQMGLLNQSRTLLSPQQQQ 3991
Query: 162 ------------ATVDSSQAPGSVQPAPITPTGEDVKPIDLTVQVEFAAAEG 201
+ +PG++ P + TG++ +D V E A EG
Sbjct: 3992 QQQVALGPGMPAKPLQHFSSPGALGPT-LLLTGKEQNTVDPAVSSE--ATEG 4040
Score = 56.6 bits (135), Expect = 3e-08
Identities = 35/76 (46%), Positives = 41/76 (53%)
Query: 101 RRRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSPSASTAQTAQLQPNLVSASAAVLLTL 160
+++ QQQQQQQQ QQQQQQQ QQQQQQ QQQQ Q Q Q + + LL+
Sbjct: 3928 QQQLQQQQQQQQLQQQQQQQLQQQQQQLQQQQQQQQQQFQQQQQQQQMGLLNQSRTLLSP 3987
Query: 161 QATVDSSQAPGSVQPA 176
Q A G PA
Sbjct: 3988 QQQQQQQVALGPGMPA 4003
Score = 55.5 bits (132), Expect = 6e-08
Identities = 32/62 (51%), Positives = 38/62 (61%), Gaps = 4/62 (6%)
Query: 89 KVARRPAGAAAARRRQQQQQQQQQQQQQQ----QQQQQQQQQQQQQQQSSPSASTAQTAQ 144
K++ +P G+ ++QQQ QQQQQ QQQQ QQQQQ QQQQ QQQQ Q Q
Sbjct: 3888 KLSAQPMGSLQQLQQQQQLQQQQQLQQQQQQQLQQQQQLQQQQLQQQQQQQQLQQQQQQQ 3947
Query: 145 LQ 146
LQ
Sbjct: 3948 LQ 3949
Score = 54.3 bits (129), Expect = 1e-07
Identities = 29/44 (65%), Positives = 30/44 (68%)
Query: 103 RQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSPSASTAQTAQLQ 146
+QQQQQQ QQQQQ QQQQ QQQQQQQQ QQ Q QLQ
Sbjct: 3913 QQQQQQQLQQQQQLQQQQLQQQQQQQQLQQQQQQQLQQQQQQLQ 3956
Score = 53.5 bits (127), Expect = 2e-07
Identities = 28/46 (60%), Positives = 31/46 (67%)
Query: 101 RRRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSPSASTAQTAQLQ 146
+++Q QQQQ QQQQQQQQ QQQQQQQ QQQQQ Q Q Q
Sbjct: 3922 QQQQLQQQQLQQQQQQQQLQQQQQQQLQQQQQQLQQQQQQQQQQFQ 3967
Score = 52.8 bits (125), Expect = 4e-07
Identities = 28/46 (60%), Positives = 31/46 (67%)
Query: 101 RRRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSPSASTAQTAQLQ 146
+++QQQQ QQQQQ QQQQ QQQQQQQQ QQQQ Q Q Q
Sbjct: 3913 QQQQQQQLQQQQQLQQQQLQQQQQQQQLQQQQQQQLQQQQQQLQQQ 3958
Score = 52.8 bits (125), Expect = 4e-07
Identities = 28/46 (60%), Positives = 31/46 (67%)
Query: 101 RRRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSPSASTAQTAQLQ 146
+++QQQ QQQQQ QQQQ QQQQQQQQ QQQQQ Q Q Q
Sbjct: 3914 QQQQQQLQQQQQLQQQQLQQQQQQQQLQQQQQQQLQQQQQQLQQQQ 3959
Score = 52.8 bits (125), Expect = 4e-07
Identities = 28/46 (60%), Positives = 31/46 (67%)
Query: 101 RRRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSPSASTAQTAQLQ 146
+++Q QQQQQ QQQQ QQQQQQQQ QQQQQQQ Q Q Q
Sbjct: 3916 QQQQLQQQQQLQQQQLQQQQQQQQLQQQQQQQLQQQQQQLQQQQQQ 3961
Score = 52.8 bits (125), Expect = 4e-07
Identities = 28/44 (63%), Positives = 29/44 (65%)
Query: 103 RQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSPSASTAQTAQLQ 146
+QQQQ QQQQ QQQQQQQQ QQQQQQQ QQ Q Q Q
Sbjct: 3921 QQQQQLQQQQLQQQQQQQQLQQQQQQQLQQQQQQLQQQQQQQQQ 3964
Score = 50.8 bits (120), Expect = 2e-06
Identities = 27/46 (58%), Positives = 30/46 (65%)
Query: 101 RRRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSPSASTAQTAQLQ 146
+++ QQQQQ QQQQ QQQQQQQQ QQQQQQQ Q Q Q
Sbjct: 3917 QQQLQQQQQLQQQQLQQQQQQQQLQQQQQQQLQQQQQQLQQQQQQQ 3962
Score = 47.8 bits (112), Expect = 1e-05
Identities = 37/116 (31%), Positives = 51/116 (43%), Gaps = 1/116 (0%)
Query: 53 QPTTGHRLCSVHFQGGRKTYTVRVPTIFPLRGVNERKVARRPAGAAAARRRQQQQQQQQQ 112
Q GHRL + Q ++ + + ++ L + + ++ +A+ QQ QQQ
Sbjct: 3845 QGLMGHRLVTAQQQQQQQQHQQQ-GSMAGLSHLQQSLMSHSGQPKLSAQPMGSLQQLQQQ 3903
Query: 113 QQQQQQQQQQQQQQQQQQQQSSPSASTAQTAQLQPNLVSASAAVLLTLQATVDSSQ 168
QQ QQQQQ QQQQQQQ QQQ Q Q Q L L Q + Q
Sbjct: 3904 QQLQQQQQLQQQQQQQLQQQQQLQQQQLQQQQQQQQLQQQQQQQLQQQQQQLQQQQ 3959
Score = 47.0 bits (110), Expect = 2e-05
Identities = 35/98 (35%), Positives = 45/98 (45%), Gaps = 3/98 (3%)
Query: 84 GVNERKVARRPAGAAAARRRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSPSASTAQTA 143
G + R + R R + Q+ QQQQQQQQQQQ Q QQQQQ P T Q
Sbjct: 3710 GPDSRLLQERQLQLQQQRMQLAQKLQQQQQQQQQQQHLLGQVAIQQQQQQGPGVQTNQAL 3769
Query: 144 QLQPN--LVSASAAVLLTLQATVDSSQAP-GSVQPAPI 178
+P + +S LL Q + Q P G + PA +
Sbjct: 3770 GPKPQGLMPPSSHQGLLVQQLSPQPPQGPQGMLGPAQV 3807
Score = 41.2 bits (95), Expect = 0.001
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 102 RRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSPSASTAQTAQLQPNLVSASAAVLL 158
R+QQ++ + + +QQQQQQQQQQQQQQ SA A + P L++ LL
Sbjct: 3582 RKQQKEHTNLMAEYRNKQQQQQQQQQQQQQQH--SAVLALSPSQSPRLLTKLPGQLL 3636
Score = 40.4 bits (93), Expect = 0.002
Identities = 22/50 (44%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 101 RRRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSPSA-STAQTAQLQPNL 149
R++Q++ + + +QQQQQQQQQQQQQQ S+ A S +Q+ +L L
Sbjct: 3582 RKQQKEHTNLMAEYRNKQQQQQQQQQQQQQQHSAVLALSPSQSPRLLTKL 3631
Score = 38.9 bits (89), Expect = 0.006
Identities = 26/77 (33%), Positives = 39/77 (50%)
Query: 105 QQQQQQQQQQQQQQQQQQQQQQQQQQQQSSPSASTAQTAQLQPNLVSASAAVLLTLQATV 164
++++ Q++QQ Q Q QQQQQQQQQ S SA A P+ S+ + Q ++
Sbjct: 3256 EKKELQKKQQLSAQLQPAQQQQQQQQQHSLLSAPGPAQAMSLPHEGSSPSLAGSQQQLSL 3315
Query: 165 DSSQAPGSVQPAPITPT 181
+ A P P+ PT
Sbjct: 3316 GLAGARQPGLPQPLMPT 3332
Score = 38.1 bits (87), Expect = 0.010
Identities = 31/95 (32%), Positives = 37/95 (38%), Gaps = 31/95 (32%)
Query: 83 RGVNERKVARRPAGAAAARRRQQQQQQQQQQQQQ-------------------------- 116
R ++ ++A++ G R QQQQQQQQ QQ
Sbjct: 3833 RVLSSPQLAQQGQGLMGHRLVTAQQQQQQQQHQQQGSMAGLSHLQQSLMSHSGQPKLSAQ 3892
Query: 117 -----QQQQQQQQQQQQQQQQSSPSASTAQTAQLQ 146
QQ QQQQQ QQQQQ Q Q QLQ
Sbjct: 3893 PMGSLQQLQQQQQLQQQQQLQQQQQQQLQQQQQLQ 3927
Score = 37.7 bits (86), Expect = 0.013
Identities = 20/44 (45%), Positives = 23/44 (52%)
Query: 104 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSPSASTAQTAQLQP 147
+ + +QQQQQQQQQQQQQQ SP T QL P
Sbjct: 3594 EYRNKQQQQQQQQQQQQQQHSAVLALSPSQSPRLLTKLPGQLLP 3637
Score = 32.7 bits (73), Expect = 0.43
Identities = 25/77 (32%), Positives = 33/77 (42%), Gaps = 7/77 (9%)
Query: 76 VPTIFPLRGVNERKVARRPAGAAAARRRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSP 135
+PT+ LR + +A+ P R QQQQQ Q Q+Q QQ Q +Q P
Sbjct: 4191 MPTVGQLRAQLQGVLAKNPQ----LRHLSPQQQQQLQALLMQRQLQQSQAVRQTPPYQEP 4246
Query: 136 SASTAQTAQL---QPNL 149
T+ L QP L
Sbjct: 4247 GTQTSPLQGLLGCQPQL 4263
Score = 32.0 bits (71), Expect = 0.73
Identities = 21/54 (38%), Positives = 26/54 (48%)
Query: 108 QQQQQQQQQQQQQQQQQQQQQQQQQSSPSASTAQTAQLQPNLVSASAAVLLTLQ 161
Q QQ Q + QQQQQQQQ S A + LQ +L+S S L+ Q
Sbjct: 3839 QLAQQGQGLMGHRLVTAQQQQQQQQHQQQGSMAGLSHLQQSLMSHSGQPKLSAQ 3892
Score = 30.8 bits (68), Expect = 1.6
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Query: 86 NERKVARRPAGAAAARRRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSPSASTAQTAQL 145
+E+K ++ +A + QQQQQQQQQ Q + SSPS + +Q QL
Sbjct: 3255 HEKKELQKKQQLSAQLQPAQQQQQQQQQHSLLSAPGPAQAMSLPHEGSSPSLAGSQ-QQL 3313
Query: 146 QPNLVSA 152
L A
Sbjct: 3314 SLGLAGA 3320
Score = 30.0 bits (66), Expect = 2.8
Identities = 29/107 (27%), Positives = 39/107 (36%), Gaps = 14/107 (13%)
Query: 83 RGVNERKVARRPAGAAAARRRQQQQQQQQQQQ--------------QQQQQQQQQQQQQQ 128
R + ER++ + A++ QQQQQQQQQQQ Q Q +
Sbjct: 3714 RLLQERQLQLQQQRMQLAQKLQQQQQQQQQQQHLLGQVAIQQQQQQGPGVQTNQALGPKP 3773
Query: 129 QQQQSSPSASTAQTAQLQPNLVSASAAVLLTLQATVDSSQAPGSVQP 175
Q S QL P +L Q V Q PG++ P
Sbjct: 3774 QGLMPPSSHQGLLVQQLSPQPPQGPQGMLGPAQVAVLQQQHPGALGP 3820
>gi|21322252 androgen receptor isoform 1 [Homo sapiens]
Length = 920
Score = 59.7 bits (143), Expect = 3e-09
Identities = 40/83 (48%), Positives = 48/83 (57%), Gaps = 15/83 (18%)
Query: 70 KTYTVRVPTIFP-LRGVNERKVARRPAGAAAA---------RRRQQQQQQQQQQQQQQQQ 119
KTY +F +R V + R P A+AA +++QQQQQQQQQQQQQQQQ
Sbjct: 17 KTYRGAFQNLFQSVREVIQNPGPRHPEAASAAPPGASLLLLQQQQQQQQQQQQQQQQQQQ 76
Query: 120 QQQQ-----QQQQQQQQQSSPSA 137
QQQQ QQQQQQ + SP A
Sbjct: 77 QQQQETSPRQQQQQQGEDGSPQA 99
Score = 58.9 bits (141), Expect = 6e-09
Identities = 32/51 (62%), Positives = 36/51 (70%), Gaps = 4/51 (7%)
Query: 94 PAGAAAARRRQQQQQQQQQQQQQQQQQQQQQQQ----QQQQQQSSPSASTA 140
P GA+ +QQQQQQQQQQQQQQQQQQQQQQ+ QQQQQQ + A
Sbjct: 49 PPGASLLLLQQQQQQQQQQQQQQQQQQQQQQQETSPRQQQQQQGEDGSPQA 99
>gi|122937189 family with sequence similarity 155, member A [Homo
sapiens]
Length = 458
Score = 57.8 bits (138), Expect = 1e-08
Identities = 32/77 (41%), Positives = 47/77 (61%)
Query: 95 AGAAAARRRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSPSASTAQTAQLQPNLVSASA 154
A A R R ++ QQQQ+QQQQQQQQQ+Q+QQQQQQ++ + A A + + +A A
Sbjct: 60 AEAKLTRARDKEHQQQQRQQQQQQQQQRQRQQQQQQRRQQEPSWPALLASMGESSPAAQA 119
Query: 155 AVLLTLQATVDSSQAPG 171
LL+ ++ +PG
Sbjct: 120 HRLLSASSSPTLPPSPG 136
Score = 48.1 bits (113), Expect = 1e-05
Identities = 30/75 (40%), Positives = 41/75 (54%)
Query: 98 AAARRRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSPSASTAQTAQLQPNLVSASAAVL 157
A A+ + + ++ QQQQ+QQQQQQQQQ+Q+QQQQQ + A L S+ AA
Sbjct: 60 AEAKLTRARDKEHQQQQRQQQQQQQQQRQRQQQQQQRRQQEPSWPALLASMGESSPAAQA 119
Query: 158 LTLQATVDSSQAPGS 172
L + S P S
Sbjct: 120 HRLLSASSSPTLPPS 134
Score = 48.1 bits (113), Expect = 1e-05
Identities = 29/72 (40%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Query: 87 ERKVARRPAGAAAARRRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSPSASTAQTAQLQ 146
E K+ R ++RQQQQQQQQQ+Q+QQQQQQ++QQ+ + ++ AQ
Sbjct: 61 EAKLTRARDKEHQQQQRQQQQQQQQQRQRQQQQQQRRQQEPSWPALLASMGESSPAAQAH 120
Query: 147 PNLVSASAAVLL 158
L+SAS++ L
Sbjct: 121 -RLLSASSSPTL 131
>gi|189491748 ataxin 1 [Homo sapiens]
Length = 815
Score = 57.0 bits (136), Expect = 2e-08
Identities = 28/44 (63%), Positives = 32/44 (72%)
Query: 96 GAAAARRRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSPSAST 139
G A +++QQQQQQQQQ Q QQQQQQQQQQQQQQ +P T
Sbjct: 192 GHKAEQQQQQQQQQQQQHQHQQQQQQQQQQQQQQHLSRAPGLIT 235
Score = 53.9 bits (128), Expect = 2e-07
Identities = 26/43 (60%), Positives = 32/43 (74%)
Query: 86 NERKVARRPAGAAAARRRQQQQQQQQQQQQQQQQQQQQQQQQQ 128
N +++ P A +++QQQQQQQQ Q QQQQQQQQQQQQQQ
Sbjct: 183 NMGSLSQTPGHKAEQQQQQQQQQQQQHQHQQQQQQQQQQQQQQ 225
Score = 53.1 bits (126), Expect = 3e-07
Identities = 26/35 (74%), Positives = 27/35 (77%)
Query: 106 QQQQQQQQQQQQQQQQQQQQQQQQQQQSSPSASTA 140
+QQQQQQQQQQQQ Q QQQQQQQQQQQ S A
Sbjct: 196 EQQQQQQQQQQQQHQHQQQQQQQQQQQQQQHLSRA 230
Score = 50.1 bits (118), Expect = 3e-06
Identities = 24/37 (64%), Positives = 28/37 (75%)
Query: 96 GAAAARRRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ 132
G+ + + +QQQQQQQQQQQQ Q QQQQQQQQQQ
Sbjct: 185 GSLSQTPGHKAEQQQQQQQQQQQQHQHQQQQQQQQQQ 221
Score = 44.3 bits (103), Expect = 1e-04
Identities = 22/47 (46%), Positives = 26/47 (55%)
Query: 105 QQQQQQQQQQQQQQQQQQQQQQQQQQQQSSPSASTAQTAQLQPNLVS 151
Q + +QQQQQQQQQQQQ Q QQQQQ Q P L++
Sbjct: 189 QTPGHKAEQQQQQQQQQQQQHQHQQQQQQQQQQQQQQHLSRAPGLIT 235
Score = 36.2 bits (82), Expect = 0.039
Identities = 24/66 (36%), Positives = 28/66 (42%), Gaps = 12/66 (18%)
Query: 111 QQQQQQQQQQQQQQQQQQQQQQSSPSASTAQTAQLQPNLVSASAAVLLTLQATVDSSQAP 170
Q + +QQQQQQQQQQQQ Q Q Q Q +L A + P
Sbjct: 189 QTPGHKAEQQQQQQQQQQQQHQHQQQQQQQQQQQQQQHLSRAPGLI------------TP 236
Query: 171 GSVQPA 176
GS PA
Sbjct: 237 GSPPPA 242
>gi|51479158 ataxin 1 [Homo sapiens]
Length = 815
Score = 57.0 bits (136), Expect = 2e-08
Identities = 28/44 (63%), Positives = 32/44 (72%)
Query: 96 GAAAARRRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSPSAST 139
G A +++QQQQQQQQQ Q QQQQQQQQQQQQQQ +P T
Sbjct: 192 GHKAEQQQQQQQQQQQQHQHQQQQQQQQQQQQQQHLSRAPGLIT 235
Score = 53.9 bits (128), Expect = 2e-07
Identities = 26/43 (60%), Positives = 32/43 (74%)
Query: 86 NERKVARRPAGAAAARRRQQQQQQQQQQQQQQQQQQQQQQQQQ 128
N +++ P A +++QQQQQQQQ Q QQQQQQQQQQQQQQ
Sbjct: 183 NMGSLSQTPGHKAEQQQQQQQQQQQQHQHQQQQQQQQQQQQQQ 225
Score = 53.1 bits (126), Expect = 3e-07
Identities = 26/35 (74%), Positives = 27/35 (77%)
Query: 106 QQQQQQQQQQQQQQQQQQQQQQQQQQQSSPSASTA 140
+QQQQQQQQQQQQ Q QQQQQQQQQQQ S A
Sbjct: 196 EQQQQQQQQQQQQHQHQQQQQQQQQQQQQQHLSRA 230
Score = 50.1 bits (118), Expect = 3e-06
Identities = 24/37 (64%), Positives = 28/37 (75%)
Query: 96 GAAAARRRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ 132
G+ + + +QQQQQQQQQQQQ Q QQQQQQQQQQ
Sbjct: 185 GSLSQTPGHKAEQQQQQQQQQQQQHQHQQQQQQQQQQ 221
Score = 44.3 bits (103), Expect = 1e-04
Identities = 22/47 (46%), Positives = 26/47 (55%)
Query: 105 QQQQQQQQQQQQQQQQQQQQQQQQQQQQSSPSASTAQTAQLQPNLVS 151
Q + +QQQQQQQQQQQQ Q QQQQQ Q P L++
Sbjct: 189 QTPGHKAEQQQQQQQQQQQQHQHQQQQQQQQQQQQQQHLSRAPGLIT 235
Score = 36.2 bits (82), Expect = 0.039
Identities = 24/66 (36%), Positives = 28/66 (42%), Gaps = 12/66 (18%)
Query: 111 QQQQQQQQQQQQQQQQQQQQQQSSPSASTAQTAQLQPNLVSASAAVLLTLQATVDSSQAP 170
Q + +QQQQQQQQQQQQ Q Q Q Q +L A + P
Sbjct: 189 QTPGHKAEQQQQQQQQQQQQHQHQQQQQQQQQQQQQQHLSRAPGLI------------TP 236
Query: 171 GSVQPA 176
GS PA
Sbjct: 237 GSPPPA 242
>gi|171543895 ataxin 2 [Homo sapiens]
Length = 1313
Score = 57.0 bits (136), Expect = 2e-08
Identities = 36/68 (52%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 110 QQQQQQQQQQQQQQQQQQQQQQQSSPSASTAQTAQLQPNLVSASAAVLLTLQATVDSS-Q 168
QQQQQQQQQQQQQQQQQQQQQQQ P+A+ + L S +AA + + SS
Sbjct: 166 QQQQQQQQQQQQQQQQQQQQQQQPPPAAANVRKPGGSGLLASPAAAPSPSSSSVSSSSAT 225
Query: 169 APGSVQPA 176
AP SV A
Sbjct: 226 APSSVVAA 233
Score = 43.5 bits (101), Expect = 2e-04
Identities = 27/58 (46%), Positives = 35/58 (60%), Gaps = 3/58 (5%)
Query: 101 RRRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSPS---ASTAQTAQLQPNLVSASAA 155
+++QQQQQQQQQQQQQQQQQQQ ++ S AS A + VS+S+A
Sbjct: 167 QQQQQQQQQQQQQQQQQQQQQQPPPAAANVRKPGGSGLLASPAAAPSPSSSSVSSSSA 224
Score = 33.9 bits (76), Expect = 0.19
Identities = 24/81 (29%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Query: 93 RPAGAAAARRRQQQQQQQQQQQQQQQQQQQQQQQQQ--QQQQSSPSASTAQTAQLQPNLV 150
+P +++QQQQQQQQQQQQQQ ++ +SP+A+ + ++ ++
Sbjct: 164 KPQQQQQQQQQQQQQQQQQQQQQQQPPPAAANVRKPGGSGLLASPAAAPSPSSS---SVS 220
Query: 151 SASAAVLLTLQATVDSSQAPG 171
S+SA ++ A PG
Sbjct: 221 SSSATAPSSVVAATSGGGRPG 241
>gi|226442791 runt-related transcription factor 2 isoform b [Homo
sapiens]
Length = 499
Score = 56.2 bits (134), Expect = 4e-08
Identities = 28/45 (62%), Positives = 33/45 (73%)
Query: 105 QQQQQQQQQQQQQQQQQQQQQQQQQQQQSSPSASTAQTAQLQPNL 149
QQQQQQQQQQQQQQQQQQQQQQQ+ ++ +A+ A A P L
Sbjct: 49 QQQQQQQQQQQQQQQQQQQQQQQEAAAAAAAAAAAAAAAAAVPRL 93
Score = 53.5 bits (127), Expect = 2e-07
Identities = 26/49 (53%), Positives = 36/49 (73%)
Query: 99 AARRRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSPSASTAQTAQLQP 147
AA+++QQQQQQQQQQQQQQQQQQQQ+ ++ +A+ A +L+P
Sbjct: 47 AAQQQQQQQQQQQQQQQQQQQQQQQEAAAAAAAAAAAAAAAAAVPRLRP 95
Score = 46.6 bits (109), Expect = 3e-05
Identities = 23/43 (53%), Positives = 31/43 (72%)
Query: 98 AAARRRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSPSASTA 140
AA +++QQQQQQQQQQQQQQQQQQQ+ ++ +A+ A
Sbjct: 47 AAQQQQQQQQQQQQQQQQQQQQQQQEAAAAAAAAAAAAAAAAA 89
Score = 45.4 bits (106), Expect = 6e-05
Identities = 24/42 (57%), Positives = 26/42 (61%)
Query: 115 QQQQQQQQQQQQQQQQQQSSPSASTAQTAQLQPNLVSASAAV 156
QQQQQQQQQQQQQQQQQQ A A +A+AAV
Sbjct: 49 QQQQQQQQQQQQQQQQQQQQQQQEAAAAAAAAAAAAAAAAAV 90
Score = 44.7 bits (104), Expect = 1e-04
Identities = 23/41 (56%), Positives = 26/41 (63%)
Query: 114 QQQQQQQQQQQQQQQQQQQSSPSASTAQTAQLQPNLVSASA 154
QQQQQQQQQQQQQQQQQQQ + A A +A+A
Sbjct: 49 QQQQQQQQQQQQQQQQQQQQQQQEAAAAAAAAAAAAAAAAA 89
Score = 43.1 bits (100), Expect = 3e-04
Identities = 24/51 (47%), Positives = 29/51 (56%)
Query: 116 QQQQQQQQQQQQQQQQQSSPSASTAQTAQLQPNLVSASAAVLLTLQATVDS 166
QQQQQQQQQQQQQQQQQ A A +A+AA + L+ D+
Sbjct: 49 QQQQQQQQQQQQQQQQQQQQQQQEAAAAAAAAAAAAAAAAAVPRLRPPHDN 99
Score = 32.0 bits (71), Expect = 0.73
Identities = 18/48 (37%), Positives = 22/48 (45%)
Query: 123 QQQQQQQQQQSSPSASTAQTAQLQPNLVSASAAVLLTLQATVDSSQAP 170
QQQQQQQQQQ Q Q + +A+AA A V + P
Sbjct: 49 QQQQQQQQQQQQQQQQQQQQQQQEAAAAAAAAAAAAAAAAAVPRLRPP 96
>gi|226442783 runt-related transcription factor 2 isoform a [Homo
sapiens]
Length = 521
Score = 56.2 bits (134), Expect = 4e-08
Identities = 28/45 (62%), Positives = 33/45 (73%)
Query: 105 QQQQQQQQQQQQQQQQQQQQQQQQQQQQSSPSASTAQTAQLQPNL 149
QQQQQQQQQQQQQQQQQQQQQQQ+ ++ +A+ A A P L
Sbjct: 49 QQQQQQQQQQQQQQQQQQQQQQQEAAAAAAAAAAAAAAAAAVPRL 93
Score = 53.5 bits (127), Expect = 2e-07
Identities = 26/49 (53%), Positives = 36/49 (73%)
Query: 99 AARRRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSPSASTAQTAQLQP 147
AA+++QQQQQQQQQQQQQQQQQQQQ+ ++ +A+ A +L+P
Sbjct: 47 AAQQQQQQQQQQQQQQQQQQQQQQQEAAAAAAAAAAAAAAAAAVPRLRP 95
Score = 46.6 bits (109), Expect = 3e-05
Identities = 23/43 (53%), Positives = 31/43 (72%)
Query: 98 AAARRRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSPSASTA 140
AA +++QQQQQQQQQQQQQQQQQQQ+ ++ +A+ A
Sbjct: 47 AAQQQQQQQQQQQQQQQQQQQQQQQEAAAAAAAAAAAAAAAAA 89
Score = 45.4 bits (106), Expect = 6e-05
Identities = 24/42 (57%), Positives = 26/42 (61%)
Query: 115 QQQQQQQQQQQQQQQQQQSSPSASTAQTAQLQPNLVSASAAV 156
QQQQQQQQQQQQQQQQQQ A A +A+AAV
Sbjct: 49 QQQQQQQQQQQQQQQQQQQQQQQEAAAAAAAAAAAAAAAAAV 90
Score = 44.7 bits (104), Expect = 1e-04
Identities = 23/41 (56%), Positives = 26/41 (63%)
Query: 114 QQQQQQQQQQQQQQQQQQQSSPSASTAQTAQLQPNLVSASA 154
QQQQQQQQQQQQQQQQQQQ + A A +A+A
Sbjct: 49 QQQQQQQQQQQQQQQQQQQQQQQEAAAAAAAAAAAAAAAAA 89
Score = 43.1 bits (100), Expect = 3e-04
Identities = 24/51 (47%), Positives = 29/51 (56%)
Query: 116 QQQQQQQQQQQQQQQQQSSPSASTAQTAQLQPNLVSASAAVLLTLQATVDS 166
QQQQQQQQQQQQQQQQQ A A +A+AA + L+ D+
Sbjct: 49 QQQQQQQQQQQQQQQQQQQQQQQEAAAAAAAAAAAAAAAAAVPRLRPPHDN 99
Score = 32.0 bits (71), Expect = 0.73
Identities = 18/48 (37%), Positives = 22/48 (45%)
Query: 123 QQQQQQQQQQSSPSASTAQTAQLQPNLVSASAAVLLTLQATVDSSQAP 170
QQQQQQQQQQ Q Q + +A+AA A V + P
Sbjct: 49 QQQQQQQQQQQQQQQQQQQQQQQEAAAAAAAAAAAAAAAAAVPRLRPP 96
>gi|66934969 runt-related transcription factor 2 isoform c [Homo
sapiens]
Length = 507
Score = 56.2 bits (134), Expect = 4e-08
Identities = 28/45 (62%), Positives = 33/45 (73%)
Query: 105 QQQQQQQQQQQQQQQQQQQQQQQQQQQQSSPSASTAQTAQLQPNL 149
QQQQQQQQQQQQQQQQQQQQQQQ+ ++ +A+ A A P L
Sbjct: 35 QQQQQQQQQQQQQQQQQQQQQQQEAAAAAAAAAAAAAAAAAVPRL 79
Score = 53.5 bits (127), Expect = 2e-07
Identities = 26/49 (53%), Positives = 36/49 (73%)
Query: 99 AARRRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSPSASTAQTAQLQP 147
AA+++QQQQQQQQQQQQQQQQQQQQ+ ++ +A+ A +L+P
Sbjct: 33 AAQQQQQQQQQQQQQQQQQQQQQQQEAAAAAAAAAAAAAAAAAVPRLRP 81
Score = 46.6 bits (109), Expect = 3e-05
Identities = 23/43 (53%), Positives = 31/43 (72%)
Query: 98 AAARRRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSPSASTA 140
AA +++QQQQQQQQQQQQQQQQQQQ+ ++ +A+ A
Sbjct: 33 AAQQQQQQQQQQQQQQQQQQQQQQQEAAAAAAAAAAAAAAAAA 75
Score = 45.4 bits (106), Expect = 6e-05
Identities = 24/42 (57%), Positives = 26/42 (61%)
Query: 115 QQQQQQQQQQQQQQQQQQSSPSASTAQTAQLQPNLVSASAAV 156
QQQQQQQQQQQQQQQQQQ A A +A+AAV
Sbjct: 35 QQQQQQQQQQQQQQQQQQQQQQQEAAAAAAAAAAAAAAAAAV 76
Score = 44.7 bits (104), Expect = 1e-04
Identities = 23/41 (56%), Positives = 26/41 (63%)
Query: 114 QQQQQQQQQQQQQQQQQQQSSPSASTAQTAQLQPNLVSASA 154
QQQQQQQQQQQQQQQQQQQ + A A +A+A
Sbjct: 35 QQQQQQQQQQQQQQQQQQQQQQQEAAAAAAAAAAAAAAAAA 75
Score = 43.1 bits (100), Expect = 3e-04
Identities = 24/51 (47%), Positives = 29/51 (56%)
Query: 116 QQQQQQQQQQQQQQQQQSSPSASTAQTAQLQPNLVSASAAVLLTLQATVDS 166
QQQQQQQQQQQQQQQQQ A A +A+AA + L+ D+
Sbjct: 35 QQQQQQQQQQQQQQQQQQQQQQQEAAAAAAAAAAAAAAAAAVPRLRPPHDN 85
Score = 32.0 bits (71), Expect = 0.73
Identities = 18/48 (37%), Positives = 22/48 (45%)
Query: 123 QQQQQQQQQQSSPSASTAQTAQLQPNLVSASAAVLLTLQATVDSSQAP 170
QQQQQQQQQQ Q Q + +A+AA A V + P
Sbjct: 35 QQQQQQQQQQQQQQQQQQQQQQQEAAAAAAAAAAAAAAAAAVPRLRPP 82
Score = 29.6 bits (65), Expect = 3.6
Identities = 19/64 (29%), Positives = 24/64 (37%)
Query: 92 RRPAGAAAARRRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSPSASTAQTAQLQPNLVS 151
R P + +RR Q + QQQQQQQQ Q Q Q +
Sbjct: 2 RIPVDPSTSRRFSPPSSSLQPGKMSDVSPVVAAQQQQQQQQQQQQQQQQQQQQQQQEAAA 61
Query: 152 ASAA 155
A+AA
Sbjct: 62 AAAA 65
>gi|38158015 mastermind-like 3 [Homo sapiens]
Length = 1133
Score = 56.2 bits (134), Expect = 4e-08
Identities = 27/42 (64%), Positives = 35/42 (83%)
Query: 97 AAAARRRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSPSAS 138
AA ++R + QQ+QQQQQQQQQQQQQQQQQQQQQ S+ +++
Sbjct: 472 AAQQQQRAKLMQQKQQQQQQQQQQQQQQQQQQQQQHSNQTSN 513
Score = 55.8 bits (133), Expect = 5e-08
Identities = 28/48 (58%), Positives = 35/48 (72%)
Query: 100 ARRRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSPSASTAQTAQLQP 147
A ++QQ+ + QQ+QQQQQQQQQQQQQQQQQQQ S T+ + L P
Sbjct: 472 AAQQQQRAKLMQQKQQQQQQQQQQQQQQQQQQQQQHSNQTSNWSPLGP 519
Score = 54.3 bits (129), Expect = 1e-07
Identities = 28/62 (45%), Positives = 37/62 (59%)
Query: 77 PTIFPLRGVNERKVARRPAGAAAARRRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSPS 136
P P ++ + ++ A R + QQ+QQQQQQQQQQQQQQQQQQQQQ + +
Sbjct: 454 PVAVPSSDMSPAEQLKQMAAQQQQRAKLMQQKQQQQQQQQQQQQQQQQQQQQQHSNQTSN 513
Query: 137 AS 138
S
Sbjct: 514 WS 515
Score = 52.4 bits (124), Expect = 5e-07
Identities = 26/48 (54%), Positives = 33/48 (68%)
Query: 88 RKVARRPAGAAAARRRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSP 135
+++A + A +++QQQQQQQQQQQQQQQQQQQQQ Q SP
Sbjct: 469 KQMAAQQQQRAKLMQQKQQQQQQQQQQQQQQQQQQQQQHSNQTSNWSP 516
Score = 46.6 bits (109), Expect = 3e-05
Identities = 22/38 (57%), Positives = 26/38 (68%)
Query: 101 RRRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSPSAS 138
+++QQQQQQQQQQQQQQQQQQQ Q P +S
Sbjct: 485 KQQQQQQQQQQQQQQQQQQQQQHSNQTSNWSPLGPPSS 522
Score = 44.3 bits (103), Expect = 1e-04
Identities = 26/72 (36%), Positives = 35/72 (48%)
Query: 77 PTIFPLRGVNERKVARRPAGAAAARRRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSPS 136
P + G VA + + A + +Q QQQQ+ + QQ+QQQQQQQQQQQQ
Sbjct: 442 PAAVTVAGSASGPVAVPSSDMSPAEQLKQMAAQQQQRAKLMQQKQQQQQQQQQQQQQQQQ 501
Query: 137 ASTAQTAQLQPN 148
Q + N
Sbjct: 502 QQQQQHSNQTSN 513
Score = 43.5 bits (101), Expect = 2e-04
Identities = 21/33 (63%), Positives = 24/33 (72%)
Query: 109 QQQQQQQQQQQQQQQQQQQQQQQQSSPSASTAQ 141
QQQQQQQQQQQQQQQQQQ Q +P A ++
Sbjct: 629 QQQQQQQQQQQQQQQQQQPPPPQLQAPRAHLSE 661
Score = 43.1 bits (100), Expect = 3e-04
Identities = 22/31 (70%), Positives = 22/31 (70%)
Query: 115 QQQQQQQQQQQQQQQQQQSSPSASTAQTAQL 145
QQQQQQQQQQQQQQQQQQ P A A L
Sbjct: 629 QQQQQQQQQQQQQQQQQQPPPPQLQAPRAHL 659
Score = 41.6 bits (96), Expect = 0.001
Identities = 22/39 (56%), Positives = 25/39 (64%)
Query: 112 QQQQQQQQQQQQQQQQQQQQQSSPSASTAQTAQLQPNLV 150
QQQQQQQQQQQQQQQQQQ A A ++ Q L+
Sbjct: 629 QQQQQQQQQQQQQQQQQQPPPPQLQAPRAHLSEDQKRLL 667
Score = 41.2 bits (95), Expect = 0.001
Identities = 20/26 (76%), Positives = 21/26 (80%)
Query: 108 QQQQQQQQQQQQQQQQQQQQQQQQQS 133
QQQQQQQQQQQQQQQQQQ Q Q+
Sbjct: 629 QQQQQQQQQQQQQQQQQQPPPPQLQA 654
Score = 40.8 bits (94), Expect = 0.002
Identities = 20/25 (80%), Positives = 20/25 (80%)
Query: 104 QQQQQQQQQQQQQQQQQQQQQQQQQ 128
QQQQQQQQQQQQQQQQQQ Q Q
Sbjct: 629 QQQQQQQQQQQQQQQQQQPPPPQLQ 653
Score = 40.8 bits (94), Expect = 0.002
Identities = 20/25 (80%), Positives = 20/25 (80%)
Query: 105 QQQQQQQQQQQQQQQQQQQQQQQQQ 129
QQQQQQQQQQQQQQQQQQ Q Q
Sbjct: 629 QQQQQQQQQQQQQQQQQQPPPPQLQ 653
Score = 40.8 bits (94), Expect = 0.002
Identities = 20/25 (80%), Positives = 20/25 (80%)
Query: 106 QQQQQQQQQQQQQQQQQQQQQQQQQ 130
QQQQQQQQQQQQQQQQQQ Q Q
Sbjct: 629 QQQQQQQQQQQQQQQQQQPPPPQLQ 653
Score = 40.8 bits (94), Expect = 0.002
Identities = 20/25 (80%), Positives = 20/25 (80%)
Query: 107 QQQQQQQQQQQQQQQQQQQQQQQQQ 131
QQQQQQQQQQQQQQQQQQ Q Q
Sbjct: 629 QQQQQQQQQQQQQQQQQQPPPPQLQ 653
Score = 40.0 bits (92), Expect = 0.003
Identities = 23/48 (47%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 101 RRRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSPSASTAQTAQLQPN 148
+++QQQQQQQQQQQQQQQQ Q S A TA+ +PN
Sbjct: 488 QQQQQQQQQQQQQQQQQQQHSNQTSNWSPLGPPSSPYGAAFTAE-KPN 534
Score = 39.3 bits (90), Expect = 0.005
Identities = 19/25 (76%), Positives = 20/25 (80%)
Query: 103 RQQQQQQQQQQQQQQQQQQQQQQQQ 127
+QQQQQQQQQQQQQQQQQ Q Q
Sbjct: 629 QQQQQQQQQQQQQQQQQQPPPPQLQ 653
Score = 38.5 bits (88), Expect = 0.008
Identities = 20/47 (42%), Positives = 25/47 (53%)
Query: 105 QQQQQQQQQQQQQQQQQQQQQQQQQQQQSSPSASTAQTAQLQPNLVS 151
+Q +Q QQQQ+ + QQ+QQQQQQQQ Q Q N S
Sbjct: 466 EQLKQMAAQQQQRAKLMQQKQQQQQQQQQQQQQQQQQQQQQHSNQTS 512
Score = 37.7 bits (86), Expect = 0.013
Identities = 18/25 (72%), Positives = 20/25 (80%)
Query: 102 RRQQQQQQQQQQQQQQQQQQQQQQQ 126
++QQQQQQQQQQQQQQQQ Q Q
Sbjct: 629 QQQQQQQQQQQQQQQQQQPPPPQLQ 653
Score = 37.7 bits (86), Expect = 0.013
Identities = 22/48 (45%), Positives = 29/48 (60%)
Query: 101 RRRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSPSASTAQTAQLQPN 148
+R Q +QQ+QQ ++Q+QQQQQQQQ +QQ S Q Q Q N
Sbjct: 742 QRAQLIEQQKQQFLREQRQQQQQQQQILAEQQLQQSHLPRQHLQPQRN 789
Score = 36.2 bits (82), Expect = 0.039
Identities = 17/25 (68%), Positives = 20/25 (80%)
Query: 101 RRRQQQQQQQQQQQQQQQQQQQQQQ 125
+++QQQQQQQQQQQQQQQ Q Q
Sbjct: 629 QQQQQQQQQQQQQQQQQQPPPPQLQ 653
Score = 35.0 bits (79), Expect = 0.086
Identities = 29/109 (26%), Positives = 42/109 (38%), Gaps = 14/109 (12%)
Query: 119 QQQQQQQQQQQQQQSSPSASTAQTAQLQPNLVSASAAVLLTLQATVDSSQAPGSVQPAPI 178
QQQQQQQQQQQQQQ Q + +L +LL Q V + + P+
Sbjct: 629 QQQQQQQQQQQQQQQQQQPPPPQLQAPRAHLSEDQKRLLLMKQKGVMNQPMAYAALPS-- 686
Query: 179 TPTGEDVKPIDLTVQVEFAAAEGAAAAAAASELQAATAGLEAAECPMGP 227
G++ P+ L S + + G+ + P GP
Sbjct: 687 --HGQEQHPVGLP----------RTTGPMQSSVPPGSGGMVSGASPAGP 723
Score = 34.7 bits (78), Expect = 0.11
Identities = 17/35 (48%), Positives = 22/35 (62%)
Query: 101 RRRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSP 135
R ++QQQQQQQQ +QQ QQ +Q Q Q +P
Sbjct: 756 REQRQQQQQQQQILAEQQLQQSHLPRQHLQPQRNP 790
Score = 34.3 bits (77), Expect = 0.15
Identities = 29/90 (32%), Positives = 41/90 (45%), Gaps = 15/90 (16%)
Query: 102 RRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSPSASTAQTAQLQ--PNLVSA--SAAVL 157
R Q+QQQQQQQQ +QQ QQ +Q Q Q Q Q P ++A S A L
Sbjct: 756 REQRQQQQQQQQILAEQQLQQSHLPRQHLQPQRNPYPVQQVNQFQGSPQDIAAVRSQAAL 815
Query: 158 LTLQAT-----------VDSSQAPGSVQPA 176
+++ + + SQ PG++ A
Sbjct: 816 QSMRTSRLMAQNAGMMGIGPSQNPGTMATA 845
Score = 33.5 bits (75), Expect = 0.25
Identities = 17/39 (43%), Positives = 25/39 (64%)
Query: 93 RPAGAAAARRRQQQQQQQQQQQQQQQQQQQQQQQQQQQQ 131
+P A + Q+ Q +QQ+QQ ++Q+QQQQQQQQ
Sbjct: 729 QPQAAIMKQMLIDQRAQLIEQQKQQFLREQRQQQQQQQQ 767
Score = 33.5 bits (75), Expect = 0.25
Identities = 17/36 (47%), Positives = 25/36 (69%)
Query: 97 AAAARRRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ 132
AA ++ Q+ Q +QQ+QQ ++Q+QQQQQQQQ
Sbjct: 732 AAIMKQMLIDQRAQLIEQQKQQFLREQRQQQQQQQQ 767
Score = 32.7 bits (73), Expect = 0.43
Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 98 AAARRRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSPSASTAQTAQL 145
AA ++ Q+ Q +QQ+QQ ++Q+QQQQQQQ + Q + L
Sbjct: 732 AAIMKQMLIDQRAQLIEQQKQQFLREQRQQQQQQQQILAEQQLQQSHL 779
Score = 32.3 bits (72), Expect = 0.56
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 97 AAAARRRQQQQQQQQQQQQQQQQQQQQQQQQQQ 129
A +++QQ ++Q+QQQQQQQQ +QQ QQ
Sbjct: 744 AQLIEQQKQQFLREQRQQQQQQQQILAEQQLQQ 776
Score = 32.0 bits (71), Expect = 0.73
Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 2/88 (2%)
Query: 81 PLRGVNERKVARRPAGAAAARRRQQQQQQQQQQQQQQQ--QQQQQQQQQQQQQQSSPSAS 138
P + ++ + + A +++Q ++Q+QQQQQQQQ +QQ QQ +Q P +
Sbjct: 730 PQAAIMKQMLIDQRAQLIEQQKQQFLREQRQQQQQQQQILAEQQLQQSHLPRQHLQPQRN 789
Query: 139 TAQTAQLQPNLVSASAAVLLTLQATVDS 166
Q+ S + QA + S
Sbjct: 790 PYPVQQVNQFQGSPQDIAAVRSQAALQS 817
Score = 31.6 bits (70), Expect = 0.96
Identities = 15/32 (46%), Positives = 20/32 (62%)
Query: 101 RRRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ 132
+++QQQQQQQQQQQQ Q Q + + Q
Sbjct: 632 QQQQQQQQQQQQQQQPPPPQLQAPRAHLSEDQ 663
Score = 30.0 bits (66), Expect = 2.8
Identities = 14/32 (43%), Positives = 20/32 (62%)
Query: 101 RRRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ 132
+++QQQQQQQQQQQ Q Q + + Q+
Sbjct: 633 QQQQQQQQQQQQQQPPPPQLQAPRAHLSEDQK 664
Score = 28.5 bits (62), Expect = 8.1
Identities = 13/32 (40%), Positives = 20/32 (62%)
Query: 101 RRRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ 132
+++QQQQQQQQQQ Q Q + + Q++
Sbjct: 634 QQQQQQQQQQQQQPPPPQLQAPRAHLSEDQKR 665
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.126 0.356
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,890,804
Number of Sequences: 37866
Number of extensions: 548564
Number of successful extensions: 29904
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 510
Number of HSP's successfully gapped in prelim test: 212
Number of HSP's that attempted gapping in prelim test: 9299
Number of HSP's gapped (non-prelim): 7797
length of query: 314
length of database: 18,247,518
effective HSP length: 102
effective length of query: 212
effective length of database: 14,385,186
effective search space: 3049659432
effective search space used: 3049659432
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.