Guide to the Human Genome
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Search of human proteins with 40288286

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|40288286 nudix-type motif 1 isoform p22 [Homo sapiens]
         (179 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|40288286 nudix-type motif 1 isoform p22 [Homo sapiens]             377   e-105
gi|40288282 nudix-type motif 1 isoform p22 [Homo sapiens]             377   e-105
gi|40288278 nudix-type motif 1 isoform p22 [Homo sapiens]             377   e-105
gi|40288284 nudix-type motif 1 isoform p18 [Homo sapiens]             328   2e-90
gi|40288280 nudix-type motif 1 isoform p18 [Homo sapiens]             328   2e-90
gi|40288276 nudix-type motif 1 isoform p18 [Homo sapiens]             328   2e-90
gi|40288274 nudix-type motif 1 isoform p18 [Homo sapiens]             328   2e-90
gi|8922792 nudix-type motif 15 [Homo sapiens]                          45   3e-05
gi|13899267 nudix-type motif 12 [Homo sapiens]                         43   1e-04
gi|50593112 nudix-type motif 13 [Homo sapiens]                         36   0.015
gi|118026927 nudix (nucleoside diphosphate linked moiety X)-type...    34   0.077
gi|62543567 nudix (nucleoside diphosphate linked moiety X)-type ...    30   1.1  
gi|45505137 podocan [Homo sapiens]                                     30   1.1  
gi|89111135 ATP-binding cassette protein C12 [Homo sapiens]            29   2.5  
gi|37594464 nudix-type motif 5 [Homo sapiens]                          28   4.2  
gi|115583677 sodium channel, voltage-gated, type I, alpha [Homo ...    28   5.5  
gi|46395496 G protein-coupled receptor for asthma susceptibility...    28   5.5  
gi|46391085 G protein-coupled receptor for asthma susceptibility...    28   5.5  
gi|154689817 beta 1,3-galactosyltransferase-like [Homo sapiens]        28   5.5  
gi|45505130 TAO kinase 2 isoform 2 [Homo sapiens]                      28   5.5  
gi|156071456 serpin peptidase inhibitor, clade B, member 11 [Hom...    28   5.5  
gi|19923855 SYAP1 protein [Homo sapiens]                               27   7.2  
gi|4758822 nephrin precursor [Homo sapiens]                            27   9.4  

>gi|40288286 nudix-type motif 1 isoform p22 [Homo sapiens]
          Length = 179

 Score =  377 bits (968), Expect = e-105
 Identities = 179/179 (100%), Positives = 179/179 (100%)

Query: 1   MSGISPQQMGEPEGSWSGKNPGTMGASRLYTLVLVLQPQRVLLGMKKRGFGAGRWNGFGG 60
           MSGISPQQMGEPEGSWSGKNPGTMGASRLYTLVLVLQPQRVLLGMKKRGFGAGRWNGFGG
Sbjct: 1   MSGISPQQMGEPEGSWSGKNPGTMGASRLYTLVLVLQPQRVLLGMKKRGFGAGRWNGFGG 60

Query: 61  KVQEGETIEDGARRELQEESGLTVDALHKVGQIVFEFVGEPELMDVHVFCTDSIQGTPVE 120
           KVQEGETIEDGARRELQEESGLTVDALHKVGQIVFEFVGEPELMDVHVFCTDSIQGTPVE
Sbjct: 61  KVQEGETIEDGARRELQEESGLTVDALHKVGQIVFEFVGEPELMDVHVFCTDSIQGTPVE 120

Query: 121 SDEMRPCWFQLDQIPFKDMWPDDSYWFPLLLQKKKFHGYFKFQGQDTILDYTLREVDTV 179
           SDEMRPCWFQLDQIPFKDMWPDDSYWFPLLLQKKKFHGYFKFQGQDTILDYTLREVDTV
Sbjct: 121 SDEMRPCWFQLDQIPFKDMWPDDSYWFPLLLQKKKFHGYFKFQGQDTILDYTLREVDTV 179


>gi|40288282 nudix-type motif 1 isoform p22 [Homo sapiens]
          Length = 179

 Score =  377 bits (968), Expect = e-105
 Identities = 179/179 (100%), Positives = 179/179 (100%)

Query: 1   MSGISPQQMGEPEGSWSGKNPGTMGASRLYTLVLVLQPQRVLLGMKKRGFGAGRWNGFGG 60
           MSGISPQQMGEPEGSWSGKNPGTMGASRLYTLVLVLQPQRVLLGMKKRGFGAGRWNGFGG
Sbjct: 1   MSGISPQQMGEPEGSWSGKNPGTMGASRLYTLVLVLQPQRVLLGMKKRGFGAGRWNGFGG 60

Query: 61  KVQEGETIEDGARRELQEESGLTVDALHKVGQIVFEFVGEPELMDVHVFCTDSIQGTPVE 120
           KVQEGETIEDGARRELQEESGLTVDALHKVGQIVFEFVGEPELMDVHVFCTDSIQGTPVE
Sbjct: 61  KVQEGETIEDGARRELQEESGLTVDALHKVGQIVFEFVGEPELMDVHVFCTDSIQGTPVE 120

Query: 121 SDEMRPCWFQLDQIPFKDMWPDDSYWFPLLLQKKKFHGYFKFQGQDTILDYTLREVDTV 179
           SDEMRPCWFQLDQIPFKDMWPDDSYWFPLLLQKKKFHGYFKFQGQDTILDYTLREVDTV
Sbjct: 121 SDEMRPCWFQLDQIPFKDMWPDDSYWFPLLLQKKKFHGYFKFQGQDTILDYTLREVDTV 179


>gi|40288278 nudix-type motif 1 isoform p22 [Homo sapiens]
          Length = 179

 Score =  377 bits (968), Expect = e-105
 Identities = 179/179 (100%), Positives = 179/179 (100%)

Query: 1   MSGISPQQMGEPEGSWSGKNPGTMGASRLYTLVLVLQPQRVLLGMKKRGFGAGRWNGFGG 60
           MSGISPQQMGEPEGSWSGKNPGTMGASRLYTLVLVLQPQRVLLGMKKRGFGAGRWNGFGG
Sbjct: 1   MSGISPQQMGEPEGSWSGKNPGTMGASRLYTLVLVLQPQRVLLGMKKRGFGAGRWNGFGG 60

Query: 61  KVQEGETIEDGARRELQEESGLTVDALHKVGQIVFEFVGEPELMDVHVFCTDSIQGTPVE 120
           KVQEGETIEDGARRELQEESGLTVDALHKVGQIVFEFVGEPELMDVHVFCTDSIQGTPVE
Sbjct: 61  KVQEGETIEDGARRELQEESGLTVDALHKVGQIVFEFVGEPELMDVHVFCTDSIQGTPVE 120

Query: 121 SDEMRPCWFQLDQIPFKDMWPDDSYWFPLLLQKKKFHGYFKFQGQDTILDYTLREVDTV 179
           SDEMRPCWFQLDQIPFKDMWPDDSYWFPLLLQKKKFHGYFKFQGQDTILDYTLREVDTV
Sbjct: 121 SDEMRPCWFQLDQIPFKDMWPDDSYWFPLLLQKKKFHGYFKFQGQDTILDYTLREVDTV 179


>gi|40288284 nudix-type motif 1 isoform p18 [Homo sapiens]
          Length = 156

 Score =  328 bits (840), Expect = 2e-90
 Identities = 156/156 (100%), Positives = 156/156 (100%)

Query: 24  MGASRLYTLVLVLQPQRVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLT 83
           MGASRLYTLVLVLQPQRVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLT
Sbjct: 1   MGASRLYTLVLVLQPQRVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLT 60

Query: 84  VDALHKVGQIVFEFVGEPELMDVHVFCTDSIQGTPVESDEMRPCWFQLDQIPFKDMWPDD 143
           VDALHKVGQIVFEFVGEPELMDVHVFCTDSIQGTPVESDEMRPCWFQLDQIPFKDMWPDD
Sbjct: 61  VDALHKVGQIVFEFVGEPELMDVHVFCTDSIQGTPVESDEMRPCWFQLDQIPFKDMWPDD 120

Query: 144 SYWFPLLLQKKKFHGYFKFQGQDTILDYTLREVDTV 179
           SYWFPLLLQKKKFHGYFKFQGQDTILDYTLREVDTV
Sbjct: 121 SYWFPLLLQKKKFHGYFKFQGQDTILDYTLREVDTV 156


>gi|40288280 nudix-type motif 1 isoform p18 [Homo sapiens]
          Length = 156

 Score =  328 bits (840), Expect = 2e-90
 Identities = 156/156 (100%), Positives = 156/156 (100%)

Query: 24  MGASRLYTLVLVLQPQRVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLT 83
           MGASRLYTLVLVLQPQRVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLT
Sbjct: 1   MGASRLYTLVLVLQPQRVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLT 60

Query: 84  VDALHKVGQIVFEFVGEPELMDVHVFCTDSIQGTPVESDEMRPCWFQLDQIPFKDMWPDD 143
           VDALHKVGQIVFEFVGEPELMDVHVFCTDSIQGTPVESDEMRPCWFQLDQIPFKDMWPDD
Sbjct: 61  VDALHKVGQIVFEFVGEPELMDVHVFCTDSIQGTPVESDEMRPCWFQLDQIPFKDMWPDD 120

Query: 144 SYWFPLLLQKKKFHGYFKFQGQDTILDYTLREVDTV 179
           SYWFPLLLQKKKFHGYFKFQGQDTILDYTLREVDTV
Sbjct: 121 SYWFPLLLQKKKFHGYFKFQGQDTILDYTLREVDTV 156


>gi|40288276 nudix-type motif 1 isoform p18 [Homo sapiens]
          Length = 156

 Score =  328 bits (840), Expect = 2e-90
 Identities = 156/156 (100%), Positives = 156/156 (100%)

Query: 24  MGASRLYTLVLVLQPQRVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLT 83
           MGASRLYTLVLVLQPQRVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLT
Sbjct: 1   MGASRLYTLVLVLQPQRVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLT 60

Query: 84  VDALHKVGQIVFEFVGEPELMDVHVFCTDSIQGTPVESDEMRPCWFQLDQIPFKDMWPDD 143
           VDALHKVGQIVFEFVGEPELMDVHVFCTDSIQGTPVESDEMRPCWFQLDQIPFKDMWPDD
Sbjct: 61  VDALHKVGQIVFEFVGEPELMDVHVFCTDSIQGTPVESDEMRPCWFQLDQIPFKDMWPDD 120

Query: 144 SYWFPLLLQKKKFHGYFKFQGQDTILDYTLREVDTV 179
           SYWFPLLLQKKKFHGYFKFQGQDTILDYTLREVDTV
Sbjct: 121 SYWFPLLLQKKKFHGYFKFQGQDTILDYTLREVDTV 156


>gi|40288274 nudix-type motif 1 isoform p18 [Homo sapiens]
          Length = 156

 Score =  328 bits (840), Expect = 2e-90
 Identities = 156/156 (100%), Positives = 156/156 (100%)

Query: 24  MGASRLYTLVLVLQPQRVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLT 83
           MGASRLYTLVLVLQPQRVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLT
Sbjct: 1   MGASRLYTLVLVLQPQRVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLT 60

Query: 84  VDALHKVGQIVFEFVGEPELMDVHVFCTDSIQGTPVESDEMRPCWFQLDQIPFKDMWPDD 143
           VDALHKVGQIVFEFVGEPELMDVHVFCTDSIQGTPVESDEMRPCWFQLDQIPFKDMWPDD
Sbjct: 61  VDALHKVGQIVFEFVGEPELMDVHVFCTDSIQGTPVESDEMRPCWFQLDQIPFKDMWPDD 120

Query: 144 SYWFPLLLQKKKFHGYFKFQGQDTILDYTLREVDTV 179
           SYWFPLLLQKKKFHGYFKFQGQDTILDYTLREVDTV
Sbjct: 121 SYWFPLLLQKKKFHGYFKFQGQDTILDYTLREVDTV 156


>gi|8922792 nudix-type motif 15 [Homo sapiens]
          Length = 164

 Score = 45.4 bits (106), Expect = 3e-05
 Identities = 39/130 (30%), Positives = 64/130 (49%), Gaps = 11/130 (8%)

Query: 38  PQRVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLTVDALHKVGQIVFEF 97
           P+ VLLG +K   GAG +   GG ++ GET E+ A+RE  EE+ L +  +H    +V  F
Sbjct: 26  PRCVLLGKRKGSVGAGSFQLPGGHLEFGETWEECAQRETWEEAALHLKNVH-FASVVNSF 84

Query: 98  VGEPE------LMDVHVFCTDSIQGTPVESDEMRPCWFQLDQIPFKDMWPDDSYWFPLLL 151
           + +        LM   V  T   +   VE  E    W   + +P++++ P D  ++ L  
Sbjct: 85  IEKENYHYVTILMKGEVDVTHDSEPKNVE-PEKNESW---EWVPWEELPPLDQLFWGLRC 140

Query: 152 QKKKFHGYFK 161
            K++ +  FK
Sbjct: 141 LKEQGYDPFK 150


>gi|13899267 nudix-type motif 12 [Homo sapiens]
          Length = 462

 Score = 43.1 bits (100), Expect = 1e-04
 Identities = 24/55 (43%), Positives = 35/55 (63%), Gaps = 3/55 (5%)

Query: 32  LVLVLQPQ--RVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLTV 84
           ++ V+ P   + LLG +KR F  G +    G ++ GETIED  RRE++EESG+ V
Sbjct: 326 IMQVIHPDGTKCLLGRQKR-FPPGMFTCLAGFIEPGETIEDAVRREVEEESGVKV 379


>gi|50593112 nudix-type motif 13 [Homo sapiens]
          Length = 352

 Score = 36.2 bits (82), Expect = 0.015
 Identities = 27/104 (25%), Positives = 44/104 (42%), Gaps = 2/104 (1%)

Query: 32  LVLVLQPQRVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLTVDALHKVG 91
           + LV    R LL  ++  F  G ++   G    GE++E+  RRE+ EE GL V++L    
Sbjct: 203 ITLVSDGTRCLLA-RQSSFPKGMYSALAGFCDIGESVEETIRREVAEEVGLEVESLQYYA 261

Query: 92  QIVFEFVGEPELMDVHVFCTDSIQGTPVESDEMR-PCWFQLDQI 134
              + F     ++  H           V   E+    WF  D++
Sbjct: 262 SQHWPFPSGSLMIACHATVKPGQTEIQVNLRELETAAWFSHDEV 305


>gi|118026927 nudix (nucleoside diphosphate linked moiety X)-type
           motif 18 [Homo sapiens]
          Length = 323

 Score = 33.9 bits (76), Expect = 0.077
 Identities = 29/112 (25%), Positives = 52/112 (46%), Gaps = 18/112 (16%)

Query: 33  VLVLQPQRVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGL-----TVDAL 87
           V + +   VLL  + +    G W    G+++ GETI +  +RE++EE+GL     T+ ++
Sbjct: 49  VFLSEQDEVLLIQEAKRECRGSWYLPAGRMEPGETIVEALQREVKEEAGLHCEPETLLSV 108

Query: 88  HKVGQ--IVFEFVGEPELMDVHVFCTDSIQGTPVESD--EMRPCWFQLDQIP 135
            + G   + F F+  P         T  I  T  E+D   ++  W+    +P
Sbjct: 109 EERGPSWVRFVFLARP---------TGGILKTSKEADAESLQAAWYPRTSLP 151


>gi|62543567 nudix (nucleoside diphosphate linked moiety X)-type
           motif 17 [Homo sapiens]
          Length = 328

 Score = 30.0 bits (66), Expect = 1.1
 Identities = 22/64 (34%), Positives = 28/64 (43%), Gaps = 2/64 (3%)

Query: 21  PGTMGASRLYTLVLVLQPQRVLLGMKKRGFGAGR--WNGFGGKVQEGETIEDGARRELQE 78
           P   G      ++L    + VLL  + R        W   GG V+  E + DG  REL E
Sbjct: 86  PTDRGVDLGVAVILQSSDKTVLLTRRARTLSVSPNLWVPPGGHVELEEELLDGGLRELWE 145

Query: 79  ESGL 82
           ESGL
Sbjct: 146 ESGL 149


>gi|45505137 podocan [Homo sapiens]
          Length = 661

 Score = 30.0 bits (66), Expect = 1.1
 Identities = 24/67 (35%), Positives = 32/67 (47%), Gaps = 5/67 (7%)

Query: 7  QQMGEPEGSWSGKNPGTMGASRLYTLVLVLQPQRVL---LGMKKRGFGAGRWNGFGGKVQ 63
          +Q   P  S S    GTM  SR+  L+L+L PQ  L   L ++  GF  GR  G     +
Sbjct: 32 RQPWRPGASDSAPPAGTMAQSRVLLLLLLLPPQLHLGPVLAVRAPGF--GRSGGHSLSPE 89

Query: 64 EGETIED 70
          E E  E+
Sbjct: 90 ENEFAEE 96


>gi|89111135 ATP-binding cassette protein C12 [Homo sapiens]
          Length = 1359

 Score = 28.9 bits (63), Expect = 2.5
 Identities = 16/62 (25%), Positives = 32/62 (51%), Gaps = 4/62 (6%)

Query: 62  VQEGETIEDGARRELQEESGLTVDALHKVGQIVFEFVGEPELMDVHVFCTDSIQGTPVES 121
           +++GE  E G  +EL EE G     +H +  + F+   +PE +  +    ++ + +P E 
Sbjct: 674 LEDGEICEKGTHKELMEERGRYAKLIHNLRGLQFK---DPEHL-YNAAMVEAFKESPAER 729

Query: 122 DE 123
           +E
Sbjct: 730 EE 731


>gi|37594464 nudix-type motif 5 [Homo sapiens]
          Length = 219

 Score = 28.1 bits (61), Expect = 4.2
 Identities = 13/26 (50%), Positives = 17/26 (65%)

Query: 60  GKVQEGETIEDGARRELQEESGLTVD 85
           G + +GET E  A REL+EE+G   D
Sbjct: 97  GLIDDGETPEAAALRELEEETGYKGD 122


>gi|115583677 sodium channel, voltage-gated, type I, alpha [Homo
           sapiens]
          Length = 1998

 Score = 27.7 bits (60), Expect = 5.5
 Identities = 18/88 (20%), Positives = 32/88 (36%), Gaps = 9/88 (10%)

Query: 59  GGKVQEGETIEDGARRELQEESGLTVDALHKVGQIVFEFVGEPELMDVHVFCTDSIQGTP 118
           G  + EG T E   R+       +++D L    Q           M +    T++++   
Sbjct: 665 GQLLPEGTTTETEMRKRRSSSFHVSMDFLEDPSQ-------RQRAMSIASILTNTVEELE 717

Query: 119 VESDEMRPCWFQLDQIPFKDMWPDDSYW 146
               +  PCW++   I    +W    YW
Sbjct: 718 ESRQKCPPCWYKFSNIFL--IWDCSPYW 743


>gi|46395496 G protein-coupled receptor for asthma susceptibility
           isoform A [Homo sapiens]
          Length = 371

 Score = 27.7 bits (60), Expect = 5.5
 Identities = 8/12 (66%), Positives = 10/12 (83%)

Query: 139 MWPDDSYWFPLL 150
           +WPDDSYW P +
Sbjct: 200 LWPDDSYWTPYM 211


>gi|46391085 G protein-coupled receptor for asthma susceptibility
           isoform B [Homo sapiens]
          Length = 377

 Score = 27.7 bits (60), Expect = 5.5
 Identities = 8/12 (66%), Positives = 10/12 (83%)

Query: 139 MWPDDSYWFPLL 150
           +WPDDSYW P +
Sbjct: 200 LWPDDSYWTPYM 211


>gi|154689817 beta 1,3-galactosyltransferase-like [Homo sapiens]
          Length = 498

 Score = 27.7 bits (60), Expect = 5.5
 Identities = 11/36 (30%), Positives = 20/36 (55%)

Query: 79  ESGLTVDALHKVGQIVFEFVGEPELMDVHVFCTDSI 114
           +S  T+D  H++   +++  G P L  V  FCT+ +
Sbjct: 210 KSDFTIDLKHEIALYIWDKGGGPPLTPVPEFCTNDV 245


>gi|45505130 TAO kinase 2 isoform 2 [Homo sapiens]
          Length = 1235

 Score = 27.7 bits (60), Expect = 5.5
 Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 6/62 (9%)

Query: 42  LLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLTVDALHKVGQIVFEFV-GE 100
           +LG ++   G  R  G     +EG T+E   +R L EESG    +  K G +V E V G 
Sbjct: 788 MLGEEEEAVGERRILG-----KEGATLEPKQQRILGEESGAPSPSPQKHGSLVDEEVWGL 842

Query: 101 PE 102
           PE
Sbjct: 843 PE 844


>gi|156071456 serpin peptidase inhibitor, clade B, member 11 [Homo
           sapiens]
          Length = 392

 Score = 27.7 bits (60), Expect = 5.5
 Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 5/51 (9%)

Query: 53  GRWNGFGGKVQEGETIEDGARRELQEESGLTVDALHKVGQIVFEFVGEPEL 103
           G+W     K Q  ET++     +L E   +TV+ ++++G     FV EP++
Sbjct: 186 GQWQN---KFQVRETVKSPF--QLSEGKNVTVEMMYQIGTFKLAFVKEPQM 231


>gi|19923855 SYAP1 protein [Homo sapiens]
          Length = 352

 Score = 27.3 bits (59), Expect = 7.2
 Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 5/58 (8%)

Query: 43 LGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLTVDALHKV---GQIVFEF 97
          LG+++   G G+ NG     Q  ET+ + A  ELQ+      + LH+    G  +F F
Sbjct: 9  LGLQQPVAGGGQPNGDAPPEQPSETVAESAEEELQQAG--DQELLHQAKDFGNYLFNF 64


>gi|4758822 nephrin precursor [Homo sapiens]
          Length = 1241

 Score = 26.9 bits (58), Expect = 9.4
 Identities = 15/52 (28%), Positives = 23/52 (44%)

Query: 97   FVGEPELMDVHVFCTDSIQGTPVESDEMRPCWFQLDQIPFKDMWPDDSYWFP 148
            F GE E M       D ++ T   S    P + ++   P+   WP+D+Y  P
Sbjct: 1162 FTGEDEDMAFPGHLYDEVERTYPPSGAWGPLYDEVQMGPWDLHWPEDTYQDP 1213


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.140    0.441 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,485,625
Number of Sequences: 37866
Number of extensions: 351547
Number of successful extensions: 746
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 727
Number of HSP's gapped (non-prelim): 23
length of query: 179
length of database: 18,247,518
effective HSP length: 96
effective length of query: 83
effective length of database: 14,612,382
effective search space: 1212827706
effective search space used: 1212827706
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
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