Guide to the Human Genome
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Name: NPSR1 Sequence: fasta or formatted (377aa) NCBI GI: 46391085
Description:

G protein-coupled receptor for asthma susceptibility isoform B

Referenced in:

Peptide and Protein G-coupled Signals

Other entries for this name:
alt prot [371aa] G protein-coupled receptor for asthma susceptibility isoform A
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.0         19           2
 C cysteine            2.7         10           2
 D aspartate           3.4         13           2
 E glutamate           3.2         12           1
 F phenylalanine       6.9         26           2
 G glycine             4.2         16           1
 H histidine           0.3          1           1
 I isoleucine          9.8         37           4
 K lysine              4.2         16           3
 L leucine            10.1         38           2
 M methionine          1.6          6           1
 N asparagine          3.4         13           1
 P proline             4.5         17           1
 Q glutamine           3.2         12           1
 R arginine            4.5         17           2
 S serine              9.3         35           3
 T threonine           7.7         29           1
 V valine              8.0         30           2
 W tryptophan          3.4         13           1
 Y tyrosine            4.5         17           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   G protein-coupled receptor for asthma susceptibility... 
NPSR1                 0.898   G protein-coupled receptor for asthma susceptibility...
OXTR                  0.188   oxytocin receptor 
AVPR1B                0.175   arginine vasopressin receptor 1B 
AVPR1A                0.171   arginine vasopressin receptor 1A 
AVPR2                 0.159   arginine vasopressin receptor 2 isoform 1 
AVPR2                 0.133   arginine vasopressin receptor 2 isoform 2 
TACR3                 0.124   tachykinin receptor 3 
GPR19                 0.120   G protein-coupled receptor 19 
TACR1                 0.109   tachykinin receptor 1 isoform short 
TACR1                 0.109   tachykinin receptor 1 isoform long 
NPFFR2                0.102   neuropeptide FF receptor 2 isoform 2 
NPFFR2                0.102   neuropeptide FF receptor 2 isoform 1 
NPFFR2                0.102   neuropeptide FF receptor 2 isoform 3 
SSTR2                 0.101   somatostatin receptor 2 
PROKR2                0.100   prokineticin receptor 2 
PROKR1                0.098   G protein-coupled receptor 73 
TACR2                 0.098   tachykinin receptor 2 
HCRTR2                0.097   orexin receptor 2 
GNRHR                 0.097   gonadotropin-releasing hormone receptor isoform 1 [Ho...
RXFP3                 0.093   relaxin/insulin-like family peptide receptor 3 
OPRK1                 0.089   opioid receptor, kappa 1 
NPFFR1                0.087   neuropeptide FF receptor 1 
HCRTR1                0.087   orexin receptor 1 
GALR1                 0.086   galanin receptor 1 
OPRL1                 0.085   opiate receptor-like 1 
OPRL1                 0.085   opiate receptor-like 1 
GALR2                 0.085   galanin receptor 2 
GPR83                 0.082   G protein-coupled receptor 83 
NPY2R                 0.082   neuropeptide Y receptor Y2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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