Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: NPSR1 Sequence: fasta or formatted (371aa) NCBI GI: 46395496
Description:

G protein-coupled receptor for asthma susceptibility isoform A

Referenced in:

Peptide and Protein G-coupled Signals

Other entries for this name:
alt prot [377aa] G protein-coupled receptor for asthma susceptibility isoform B
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.3         16           1
 C cysteine            2.4          9           2
 D aspartate           3.8         14           2
 E glutamate           4.0         15           1
 F phenylalanine       7.5         28           2
 G glycine             3.8         14           1
 H histidine           0.5          2           1
 I isoleucine         10.2         38           4
 K lysine              4.3         16           3
 L leucine             9.2         34           2
 M methionine          1.9          7           1
 N asparagine          3.2         12           1
 P proline             3.8         14           1
 Q glutamine           3.2         12           1
 R arginine            4.9         18           2
 S serine             10.0         37           3
 T threonine           8.1         30           1
 V valine              7.5         28           2
 W tryptophan          2.7         10           1
 Y tyrosine            4.6         17           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   G protein-coupled receptor for asthma susceptibility... 
NPSR1                 0.921   G protein-coupled receptor for asthma susceptibility...
OXTR                  0.193   oxytocin receptor 
AVPR1B                0.180   arginine vasopressin receptor 1B 
AVPR1A                0.175   arginine vasopressin receptor 1A 
AVPR2                 0.162   arginine vasopressin receptor 2 isoform 1 
AVPR2                 0.137   arginine vasopressin receptor 2 isoform 2 
TACR3                 0.127   tachykinin receptor 3 
GPR19                 0.124   G protein-coupled receptor 19 
TACR1                 0.112   tachykinin receptor 1 isoform short 
TACR1                 0.112   tachykinin receptor 1 isoform long 
SSTR2                 0.104   somatostatin receptor 2 
PROKR2                0.102   prokineticin receptor 2 
NPFFR2                0.102   neuropeptide FF receptor 2 isoform 2 
NPFFR2                0.102   neuropeptide FF receptor 2 isoform 1 
NPFFR2                0.102   neuropeptide FF receptor 2 isoform 3 
PROKR1                0.101   G protein-coupled receptor 73 
TACR2                 0.099   tachykinin receptor 2 
GNRHR                 0.099   gonadotropin-releasing hormone receptor isoform 1 [Ho...
HCRTR2                0.098   orexin receptor 2 
RXFP3                 0.095   relaxin/insulin-like family peptide receptor 3 
OPRK1                 0.091   opioid receptor, kappa 1 
OPRL1                 0.091   opiate receptor-like 1 
OPRL1                 0.091   opiate receptor-like 1 
NPFFR1                0.090   neuropeptide FF receptor 1 
HCRTR1                0.090   orexin receptor 1 
GALR1                 0.088   galanin receptor 1 
GALR2                 0.087   galanin receptor 2 
SSTR3                 0.086   somatostatin receptor 3 
OPRM1                 0.084   opioid receptor, mu 1 isoform MOR-1H 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press