BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|40288284 nudix-type motif 1 isoform p18 [Homo sapiens] (156 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|40288286 nudix-type motif 1 isoform p22 [Homo sapiens] 328 1e-90 gi|40288284 nudix-type motif 1 isoform p18 [Homo sapiens] 328 1e-90 gi|40288282 nudix-type motif 1 isoform p22 [Homo sapiens] 328 1e-90 gi|40288280 nudix-type motif 1 isoform p18 [Homo sapiens] 328 1e-90 gi|40288278 nudix-type motif 1 isoform p22 [Homo sapiens] 328 1e-90 gi|40288276 nudix-type motif 1 isoform p18 [Homo sapiens] 328 1e-90 gi|40288274 nudix-type motif 1 isoform p18 [Homo sapiens] 328 1e-90 gi|8922792 nudix-type motif 15 [Homo sapiens] 45 2e-05 gi|13899267 nudix-type motif 12 [Homo sapiens] 43 9e-05 gi|50593112 nudix-type motif 13 [Homo sapiens] 36 0.012 gi|118026927 nudix (nucleoside diphosphate linked moiety X)-type... 34 0.057 gi|62543567 nudix (nucleoside diphosphate linked moiety X)-type ... 29 1.4 gi|89111135 ATP-binding cassette protein C12 [Homo sapiens] 29 1.8 gi|37594464 nudix-type motif 5 [Homo sapiens] 28 3.2 gi|115583677 sodium channel, voltage-gated, type I, alpha [Homo ... 28 4.1 gi|46395496 G protein-coupled receptor for asthma susceptibility... 28 4.1 gi|46391085 G protein-coupled receptor for asthma susceptibility... 28 4.1 gi|154689817 beta 1,3-galactosyltransferase-like [Homo sapiens] 28 4.1 gi|45505130 TAO kinase 2 isoform 2 [Homo sapiens] 28 4.1 gi|156071456 serpin peptidase inhibitor, clade B, member 11 [Hom... 28 4.1 gi|19923855 SYAP1 protein [Homo sapiens] 27 5.4 gi|4758822 nephrin precursor [Homo sapiens] 27 7.0 gi|11968023 zinc finger protein 106 homolog [Homo sapiens] 27 9.2 >gi|40288286 nudix-type motif 1 isoform p22 [Homo sapiens] Length = 179 Score = 328 bits (840), Expect = 1e-90 Identities = 156/156 (100%), Positives = 156/156 (100%) Query: 1 MGASRLYTLVLVLQPQRVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLT 60 MGASRLYTLVLVLQPQRVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLT Sbjct: 24 MGASRLYTLVLVLQPQRVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLT 83 Query: 61 VDALHKVGQIVFEFVGEPELMDVHVFCTDSIQGTPVESDEMRPCWFQLDQIPFKDMWPDD 120 VDALHKVGQIVFEFVGEPELMDVHVFCTDSIQGTPVESDEMRPCWFQLDQIPFKDMWPDD Sbjct: 84 VDALHKVGQIVFEFVGEPELMDVHVFCTDSIQGTPVESDEMRPCWFQLDQIPFKDMWPDD 143 Query: 121 SYWFPLLLQKKKFHGYFKFQGQDTILDYTLREVDTV 156 SYWFPLLLQKKKFHGYFKFQGQDTILDYTLREVDTV Sbjct: 144 SYWFPLLLQKKKFHGYFKFQGQDTILDYTLREVDTV 179 >gi|40288284 nudix-type motif 1 isoform p18 [Homo sapiens] Length = 156 Score = 328 bits (840), Expect = 1e-90 Identities = 156/156 (100%), Positives = 156/156 (100%) Query: 1 MGASRLYTLVLVLQPQRVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLT 60 MGASRLYTLVLVLQPQRVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLT Sbjct: 1 MGASRLYTLVLVLQPQRVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLT 60 Query: 61 VDALHKVGQIVFEFVGEPELMDVHVFCTDSIQGTPVESDEMRPCWFQLDQIPFKDMWPDD 120 VDALHKVGQIVFEFVGEPELMDVHVFCTDSIQGTPVESDEMRPCWFQLDQIPFKDMWPDD Sbjct: 61 VDALHKVGQIVFEFVGEPELMDVHVFCTDSIQGTPVESDEMRPCWFQLDQIPFKDMWPDD 120 Query: 121 SYWFPLLLQKKKFHGYFKFQGQDTILDYTLREVDTV 156 SYWFPLLLQKKKFHGYFKFQGQDTILDYTLREVDTV Sbjct: 121 SYWFPLLLQKKKFHGYFKFQGQDTILDYTLREVDTV 156 >gi|40288282 nudix-type motif 1 isoform p22 [Homo sapiens] Length = 179 Score = 328 bits (840), Expect = 1e-90 Identities = 156/156 (100%), Positives = 156/156 (100%) Query: 1 MGASRLYTLVLVLQPQRVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLT 60 MGASRLYTLVLVLQPQRVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLT Sbjct: 24 MGASRLYTLVLVLQPQRVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLT 83 Query: 61 VDALHKVGQIVFEFVGEPELMDVHVFCTDSIQGTPVESDEMRPCWFQLDQIPFKDMWPDD 120 VDALHKVGQIVFEFVGEPELMDVHVFCTDSIQGTPVESDEMRPCWFQLDQIPFKDMWPDD Sbjct: 84 VDALHKVGQIVFEFVGEPELMDVHVFCTDSIQGTPVESDEMRPCWFQLDQIPFKDMWPDD 143 Query: 121 SYWFPLLLQKKKFHGYFKFQGQDTILDYTLREVDTV 156 SYWFPLLLQKKKFHGYFKFQGQDTILDYTLREVDTV Sbjct: 144 SYWFPLLLQKKKFHGYFKFQGQDTILDYTLREVDTV 179 >gi|40288280 nudix-type motif 1 isoform p18 [Homo sapiens] Length = 156 Score = 328 bits (840), Expect = 1e-90 Identities = 156/156 (100%), Positives = 156/156 (100%) Query: 1 MGASRLYTLVLVLQPQRVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLT 60 MGASRLYTLVLVLQPQRVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLT Sbjct: 1 MGASRLYTLVLVLQPQRVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLT 60 Query: 61 VDALHKVGQIVFEFVGEPELMDVHVFCTDSIQGTPVESDEMRPCWFQLDQIPFKDMWPDD 120 VDALHKVGQIVFEFVGEPELMDVHVFCTDSIQGTPVESDEMRPCWFQLDQIPFKDMWPDD Sbjct: 61 VDALHKVGQIVFEFVGEPELMDVHVFCTDSIQGTPVESDEMRPCWFQLDQIPFKDMWPDD 120 Query: 121 SYWFPLLLQKKKFHGYFKFQGQDTILDYTLREVDTV 156 SYWFPLLLQKKKFHGYFKFQGQDTILDYTLREVDTV Sbjct: 121 SYWFPLLLQKKKFHGYFKFQGQDTILDYTLREVDTV 156 >gi|40288278 nudix-type motif 1 isoform p22 [Homo sapiens] Length = 179 Score = 328 bits (840), Expect = 1e-90 Identities = 156/156 (100%), Positives = 156/156 (100%) Query: 1 MGASRLYTLVLVLQPQRVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLT 60 MGASRLYTLVLVLQPQRVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLT Sbjct: 24 MGASRLYTLVLVLQPQRVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLT 83 Query: 61 VDALHKVGQIVFEFVGEPELMDVHVFCTDSIQGTPVESDEMRPCWFQLDQIPFKDMWPDD 120 VDALHKVGQIVFEFVGEPELMDVHVFCTDSIQGTPVESDEMRPCWFQLDQIPFKDMWPDD Sbjct: 84 VDALHKVGQIVFEFVGEPELMDVHVFCTDSIQGTPVESDEMRPCWFQLDQIPFKDMWPDD 143 Query: 121 SYWFPLLLQKKKFHGYFKFQGQDTILDYTLREVDTV 156 SYWFPLLLQKKKFHGYFKFQGQDTILDYTLREVDTV Sbjct: 144 SYWFPLLLQKKKFHGYFKFQGQDTILDYTLREVDTV 179 >gi|40288276 nudix-type motif 1 isoform p18 [Homo sapiens] Length = 156 Score = 328 bits (840), Expect = 1e-90 Identities = 156/156 (100%), Positives = 156/156 (100%) Query: 1 MGASRLYTLVLVLQPQRVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLT 60 MGASRLYTLVLVLQPQRVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLT Sbjct: 1 MGASRLYTLVLVLQPQRVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLT 60 Query: 61 VDALHKVGQIVFEFVGEPELMDVHVFCTDSIQGTPVESDEMRPCWFQLDQIPFKDMWPDD 120 VDALHKVGQIVFEFVGEPELMDVHVFCTDSIQGTPVESDEMRPCWFQLDQIPFKDMWPDD Sbjct: 61 VDALHKVGQIVFEFVGEPELMDVHVFCTDSIQGTPVESDEMRPCWFQLDQIPFKDMWPDD 120 Query: 121 SYWFPLLLQKKKFHGYFKFQGQDTILDYTLREVDTV 156 SYWFPLLLQKKKFHGYFKFQGQDTILDYTLREVDTV Sbjct: 121 SYWFPLLLQKKKFHGYFKFQGQDTILDYTLREVDTV 156 >gi|40288274 nudix-type motif 1 isoform p18 [Homo sapiens] Length = 156 Score = 328 bits (840), Expect = 1e-90 Identities = 156/156 (100%), Positives = 156/156 (100%) Query: 1 MGASRLYTLVLVLQPQRVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLT 60 MGASRLYTLVLVLQPQRVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLT Sbjct: 1 MGASRLYTLVLVLQPQRVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLT 60 Query: 61 VDALHKVGQIVFEFVGEPELMDVHVFCTDSIQGTPVESDEMRPCWFQLDQIPFKDMWPDD 120 VDALHKVGQIVFEFVGEPELMDVHVFCTDSIQGTPVESDEMRPCWFQLDQIPFKDMWPDD Sbjct: 61 VDALHKVGQIVFEFVGEPELMDVHVFCTDSIQGTPVESDEMRPCWFQLDQIPFKDMWPDD 120 Query: 121 SYWFPLLLQKKKFHGYFKFQGQDTILDYTLREVDTV 156 SYWFPLLLQKKKFHGYFKFQGQDTILDYTLREVDTV Sbjct: 121 SYWFPLLLQKKKFHGYFKFQGQDTILDYTLREVDTV 156 >gi|8922792 nudix-type motif 15 [Homo sapiens] Length = 164 Score = 45.4 bits (106), Expect = 2e-05 Identities = 39/130 (30%), Positives = 64/130 (49%), Gaps = 11/130 (8%) Query: 15 PQRVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLTVDALHKVGQIVFEF 74 P+ VLLG +K GAG + GG ++ GET E+ A+RE EE+ L + +H +V F Sbjct: 26 PRCVLLGKRKGSVGAGSFQLPGGHLEFGETWEECAQRETWEEAALHLKNVH-FASVVNSF 84 Query: 75 VGEPE------LMDVHVFCTDSIQGTPVESDEMRPCWFQLDQIPFKDMWPDDSYWFPLLL 128 + + LM V T + VE E W + +P++++ P D ++ L Sbjct: 85 IEKENYHYVTILMKGEVDVTHDSEPKNVE-PEKNESW---EWVPWEELPPLDQLFWGLRC 140 Query: 129 QKKKFHGYFK 138 K++ + FK Sbjct: 141 LKEQGYDPFK 150 >gi|13899267 nudix-type motif 12 [Homo sapiens] Length = 462 Score = 43.1 bits (100), Expect = 9e-05 Identities = 24/55 (43%), Positives = 35/55 (63%), Gaps = 3/55 (5%) Query: 9 LVLVLQPQ--RVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLTV 61 ++ V+ P + LLG +KR F G + G ++ GETIED RRE++EESG+ V Sbjct: 326 IMQVIHPDGTKCLLGRQKR-FPPGMFTCLAGFIEPGETIEDAVRREVEEESGVKV 379 >gi|50593112 nudix-type motif 13 [Homo sapiens] Length = 352 Score = 36.2 bits (82), Expect = 0.012 Identities = 27/104 (25%), Positives = 44/104 (42%), Gaps = 2/104 (1%) Query: 9 LVLVLQPQRVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLTVDALHKVG 68 + LV R LL ++ F G ++ G GE++E+ RRE+ EE GL V++L Sbjct: 203 ITLVSDGTRCLLA-RQSSFPKGMYSALAGFCDIGESVEETIRREVAEEVGLEVESLQYYA 261 Query: 69 QIVFEFVGEPELMDVHVFCTDSIQGTPVESDEMR-PCWFQLDQI 111 + F ++ H V E+ WF D++ Sbjct: 262 SQHWPFPSGSLMIACHATVKPGQTEIQVNLRELETAAWFSHDEV 305 >gi|118026927 nudix (nucleoside diphosphate linked moiety X)-type motif 18 [Homo sapiens] Length = 323 Score = 33.9 bits (76), Expect = 0.057 Identities = 29/112 (25%), Positives = 52/112 (46%), Gaps = 18/112 (16%) Query: 10 VLVLQPQRVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGL-----TVDAL 64 V + + VLL + + G W G+++ GETI + +RE++EE+GL T+ ++ Sbjct: 49 VFLSEQDEVLLIQEAKRECRGSWYLPAGRMEPGETIVEALQREVKEEAGLHCEPETLLSV 108 Query: 65 HKVGQ--IVFEFVGEPELMDVHVFCTDSIQGTPVESD--EMRPCWFQLDQIP 112 + G + F F+ P T I T E+D ++ W+ +P Sbjct: 109 EERGPSWVRFVFLARP---------TGGILKTSKEADAESLQAAWYPRTSLP 151 >gi|62543567 nudix (nucleoside diphosphate linked moiety X)-type motif 17 [Homo sapiens] Length = 328 Score = 29.3 bits (64), Expect = 1.4 Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 2/53 (3%) Query: 9 LVLVLQPQRVLLGMKKRGFGAGR--WNGFGGKVQEGETIEDGARRELQEESGL 59 ++L + VLL + R W GG V+ E + DG REL EESGL Sbjct: 97 VILQSSDKTVLLTRRARTLSVSPNLWVPPGGHVELEEELLDGGLRELWEESGL 149 >gi|89111135 ATP-binding cassette protein C12 [Homo sapiens] Length = 1359 Score = 28.9 bits (63), Expect = 1.8 Identities = 16/62 (25%), Positives = 32/62 (51%), Gaps = 4/62 (6%) Query: 39 VQEGETIEDGARRELQEESGLTVDALHKVGQIVFEFVGEPELMDVHVFCTDSIQGTPVES 98 +++GE E G +EL EE G +H + + F+ +PE + + ++ + +P E Sbjct: 674 LEDGEICEKGTHKELMEERGRYAKLIHNLRGLQFK---DPEHL-YNAAMVEAFKESPAER 729 Query: 99 DE 100 +E Sbjct: 730 EE 731 >gi|37594464 nudix-type motif 5 [Homo sapiens] Length = 219 Score = 28.1 bits (61), Expect = 3.2 Identities = 13/26 (50%), Positives = 17/26 (65%) Query: 37 GKVQEGETIEDGARRELQEESGLTVD 62 G + +GET E A REL+EE+G D Sbjct: 97 GLIDDGETPEAAALRELEEETGYKGD 122 >gi|115583677 sodium channel, voltage-gated, type I, alpha [Homo sapiens] Length = 1998 Score = 27.7 bits (60), Expect = 4.1 Identities = 18/88 (20%), Positives = 32/88 (36%), Gaps = 9/88 (10%) Query: 36 GGKVQEGETIEDGARRELQEESGLTVDALHKVGQIVFEFVGEPELMDVHVFCTDSIQGTP 95 G + EG T E R+ +++D L Q M + T++++ Sbjct: 665 GQLLPEGTTTETEMRKRRSSSFHVSMDFLEDPSQ-------RQRAMSIASILTNTVEELE 717 Query: 96 VESDEMRPCWFQLDQIPFKDMWPDDSYW 123 + PCW++ I +W YW Sbjct: 718 ESRQKCPPCWYKFSNIFL--IWDCSPYW 743 >gi|46395496 G protein-coupled receptor for asthma susceptibility isoform A [Homo sapiens] Length = 371 Score = 27.7 bits (60), Expect = 4.1 Identities = 8/12 (66%), Positives = 10/12 (83%) Query: 116 MWPDDSYWFPLL 127 +WPDDSYW P + Sbjct: 200 LWPDDSYWTPYM 211 >gi|46391085 G protein-coupled receptor for asthma susceptibility isoform B [Homo sapiens] Length = 377 Score = 27.7 bits (60), Expect = 4.1 Identities = 8/12 (66%), Positives = 10/12 (83%) Query: 116 MWPDDSYWFPLL 127 +WPDDSYW P + Sbjct: 200 LWPDDSYWTPYM 211 >gi|154689817 beta 1,3-galactosyltransferase-like [Homo sapiens] Length = 498 Score = 27.7 bits (60), Expect = 4.1 Identities = 11/36 (30%), Positives = 20/36 (55%) Query: 56 ESGLTVDALHKVGQIVFEFVGEPELMDVHVFCTDSI 91 +S T+D H++ +++ G P L V FCT+ + Sbjct: 210 KSDFTIDLKHEIALYIWDKGGGPPLTPVPEFCTNDV 245 >gi|45505130 TAO kinase 2 isoform 2 [Homo sapiens] Length = 1235 Score = 27.7 bits (60), Expect = 4.1 Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 6/62 (9%) Query: 19 LLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLTVDALHKVGQIVFEFV-GE 77 +LG ++ G R G +EG T+E +R L EESG + K G +V E V G Sbjct: 788 MLGEEEEAVGERRILG-----KEGATLEPKQQRILGEESGAPSPSPQKHGSLVDEEVWGL 842 Query: 78 PE 79 PE Sbjct: 843 PE 844 >gi|156071456 serpin peptidase inhibitor, clade B, member 11 [Homo sapiens] Length = 392 Score = 27.7 bits (60), Expect = 4.1 Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 5/51 (9%) Query: 30 GRWNGFGGKVQEGETIEDGARRELQEESGLTVDALHKVGQIVFEFVGEPEL 80 G+W K Q ET++ +L E +TV+ ++++G FV EP++ Sbjct: 186 GQWQN---KFQVRETVKSPF--QLSEGKNVTVEMMYQIGTFKLAFVKEPQM 231 >gi|19923855 SYAP1 protein [Homo sapiens] Length = 352 Score = 27.3 bits (59), Expect = 5.4 Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 5/58 (8%) Query: 20 LGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLTVDALHKV---GQIVFEF 74 LG+++ G G+ NG Q ET+ + A ELQ+ + LH+ G +F F Sbjct: 9 LGLQQPVAGGGQPNGDAPPEQPSETVAESAEEELQQAG--DQELLHQAKDFGNYLFNF 64 >gi|4758822 nephrin precursor [Homo sapiens] Length = 1241 Score = 26.9 bits (58), Expect = 7.0 Identities = 15/52 (28%), Positives = 23/52 (44%) Query: 74 FVGEPELMDVHVFCTDSIQGTPVESDEMRPCWFQLDQIPFKDMWPDDSYWFP 125 F GE E M D ++ T S P + ++ P+ WP+D+Y P Sbjct: 1162 FTGEDEDMAFPGHLYDEVERTYPPSGAWGPLYDEVQMGPWDLHWPEDTYQDP 1213 >gi|11968023 zinc finger protein 106 homolog [Homo sapiens] Length = 1883 Score = 26.6 bits (57), Expect = 9.2 Identities = 9/20 (45%), Positives = 15/20 (75%) Query: 96 VESDEMRPCWFQLDQIPFKD 115 + SD+ RP W + D+IP++D Sbjct: 94 INSDDRRPQWRREDRIPYQD 113 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.323 0.142 0.448 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 6,079,683 Number of Sequences: 37866 Number of extensions: 278217 Number of successful extensions: 574 Number of sequences better than 10.0: 23 Number of HSP's better than 10.0 without gapping: 20 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 554 Number of HSP's gapped (non-prelim): 23 length of query: 156 length of database: 18,247,518 effective HSP length: 94 effective length of query: 62 effective length of database: 14,688,114 effective search space: 910663068 effective search space used: 910663068 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.