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Search of human proteins with 40288276
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|40288276 nudix-type motif 1 isoform p18 [Homo sapiens]
(156 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|40288286 nudix-type motif 1 isoform p22 [Homo sapiens] 328 1e-90
gi|40288284 nudix-type motif 1 isoform p18 [Homo sapiens] 328 1e-90
gi|40288282 nudix-type motif 1 isoform p22 [Homo sapiens] 328 1e-90
gi|40288280 nudix-type motif 1 isoform p18 [Homo sapiens] 328 1e-90
gi|40288278 nudix-type motif 1 isoform p22 [Homo sapiens] 328 1e-90
gi|40288276 nudix-type motif 1 isoform p18 [Homo sapiens] 328 1e-90
gi|40288274 nudix-type motif 1 isoform p18 [Homo sapiens] 328 1e-90
gi|8922792 nudix-type motif 15 [Homo sapiens] 45 2e-05
gi|13899267 nudix-type motif 12 [Homo sapiens] 43 9e-05
gi|50593112 nudix-type motif 13 [Homo sapiens] 36 0.012
gi|118026927 nudix (nucleoside diphosphate linked moiety X)-type... 34 0.057
gi|62543567 nudix (nucleoside diphosphate linked moiety X)-type ... 29 1.4
gi|89111135 ATP-binding cassette protein C12 [Homo sapiens] 29 1.8
gi|37594464 nudix-type motif 5 [Homo sapiens] 28 3.2
gi|115583677 sodium channel, voltage-gated, type I, alpha [Homo ... 28 4.1
gi|46395496 G protein-coupled receptor for asthma susceptibility... 28 4.1
gi|46391085 G protein-coupled receptor for asthma susceptibility... 28 4.1
gi|154689817 beta 1,3-galactosyltransferase-like [Homo sapiens] 28 4.1
gi|45505130 TAO kinase 2 isoform 2 [Homo sapiens] 28 4.1
gi|156071456 serpin peptidase inhibitor, clade B, member 11 [Hom... 28 4.1
gi|19923855 SYAP1 protein [Homo sapiens] 27 5.4
gi|4758822 nephrin precursor [Homo sapiens] 27 7.0
gi|11968023 zinc finger protein 106 homolog [Homo sapiens] 27 9.2
>gi|40288286 nudix-type motif 1 isoform p22 [Homo sapiens]
Length = 179
Score = 328 bits (840), Expect = 1e-90
Identities = 156/156 (100%), Positives = 156/156 (100%)
Query: 1 MGASRLYTLVLVLQPQRVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLT 60
MGASRLYTLVLVLQPQRVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLT
Sbjct: 24 MGASRLYTLVLVLQPQRVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLT 83
Query: 61 VDALHKVGQIVFEFVGEPELMDVHVFCTDSIQGTPVESDEMRPCWFQLDQIPFKDMWPDD 120
VDALHKVGQIVFEFVGEPELMDVHVFCTDSIQGTPVESDEMRPCWFQLDQIPFKDMWPDD
Sbjct: 84 VDALHKVGQIVFEFVGEPELMDVHVFCTDSIQGTPVESDEMRPCWFQLDQIPFKDMWPDD 143
Query: 121 SYWFPLLLQKKKFHGYFKFQGQDTILDYTLREVDTV 156
SYWFPLLLQKKKFHGYFKFQGQDTILDYTLREVDTV
Sbjct: 144 SYWFPLLLQKKKFHGYFKFQGQDTILDYTLREVDTV 179
>gi|40288284 nudix-type motif 1 isoform p18 [Homo sapiens]
Length = 156
Score = 328 bits (840), Expect = 1e-90
Identities = 156/156 (100%), Positives = 156/156 (100%)
Query: 1 MGASRLYTLVLVLQPQRVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLT 60
MGASRLYTLVLVLQPQRVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLT
Sbjct: 1 MGASRLYTLVLVLQPQRVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLT 60
Query: 61 VDALHKVGQIVFEFVGEPELMDVHVFCTDSIQGTPVESDEMRPCWFQLDQIPFKDMWPDD 120
VDALHKVGQIVFEFVGEPELMDVHVFCTDSIQGTPVESDEMRPCWFQLDQIPFKDMWPDD
Sbjct: 61 VDALHKVGQIVFEFVGEPELMDVHVFCTDSIQGTPVESDEMRPCWFQLDQIPFKDMWPDD 120
Query: 121 SYWFPLLLQKKKFHGYFKFQGQDTILDYTLREVDTV 156
SYWFPLLLQKKKFHGYFKFQGQDTILDYTLREVDTV
Sbjct: 121 SYWFPLLLQKKKFHGYFKFQGQDTILDYTLREVDTV 156
>gi|40288282 nudix-type motif 1 isoform p22 [Homo sapiens]
Length = 179
Score = 328 bits (840), Expect = 1e-90
Identities = 156/156 (100%), Positives = 156/156 (100%)
Query: 1 MGASRLYTLVLVLQPQRVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLT 60
MGASRLYTLVLVLQPQRVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLT
Sbjct: 24 MGASRLYTLVLVLQPQRVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLT 83
Query: 61 VDALHKVGQIVFEFVGEPELMDVHVFCTDSIQGTPVESDEMRPCWFQLDQIPFKDMWPDD 120
VDALHKVGQIVFEFVGEPELMDVHVFCTDSIQGTPVESDEMRPCWFQLDQIPFKDMWPDD
Sbjct: 84 VDALHKVGQIVFEFVGEPELMDVHVFCTDSIQGTPVESDEMRPCWFQLDQIPFKDMWPDD 143
Query: 121 SYWFPLLLQKKKFHGYFKFQGQDTILDYTLREVDTV 156
SYWFPLLLQKKKFHGYFKFQGQDTILDYTLREVDTV
Sbjct: 144 SYWFPLLLQKKKFHGYFKFQGQDTILDYTLREVDTV 179
>gi|40288280 nudix-type motif 1 isoform p18 [Homo sapiens]
Length = 156
Score = 328 bits (840), Expect = 1e-90
Identities = 156/156 (100%), Positives = 156/156 (100%)
Query: 1 MGASRLYTLVLVLQPQRVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLT 60
MGASRLYTLVLVLQPQRVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLT
Sbjct: 1 MGASRLYTLVLVLQPQRVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLT 60
Query: 61 VDALHKVGQIVFEFVGEPELMDVHVFCTDSIQGTPVESDEMRPCWFQLDQIPFKDMWPDD 120
VDALHKVGQIVFEFVGEPELMDVHVFCTDSIQGTPVESDEMRPCWFQLDQIPFKDMWPDD
Sbjct: 61 VDALHKVGQIVFEFVGEPELMDVHVFCTDSIQGTPVESDEMRPCWFQLDQIPFKDMWPDD 120
Query: 121 SYWFPLLLQKKKFHGYFKFQGQDTILDYTLREVDTV 156
SYWFPLLLQKKKFHGYFKFQGQDTILDYTLREVDTV
Sbjct: 121 SYWFPLLLQKKKFHGYFKFQGQDTILDYTLREVDTV 156
>gi|40288278 nudix-type motif 1 isoform p22 [Homo sapiens]
Length = 179
Score = 328 bits (840), Expect = 1e-90
Identities = 156/156 (100%), Positives = 156/156 (100%)
Query: 1 MGASRLYTLVLVLQPQRVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLT 60
MGASRLYTLVLVLQPQRVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLT
Sbjct: 24 MGASRLYTLVLVLQPQRVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLT 83
Query: 61 VDALHKVGQIVFEFVGEPELMDVHVFCTDSIQGTPVESDEMRPCWFQLDQIPFKDMWPDD 120
VDALHKVGQIVFEFVGEPELMDVHVFCTDSIQGTPVESDEMRPCWFQLDQIPFKDMWPDD
Sbjct: 84 VDALHKVGQIVFEFVGEPELMDVHVFCTDSIQGTPVESDEMRPCWFQLDQIPFKDMWPDD 143
Query: 121 SYWFPLLLQKKKFHGYFKFQGQDTILDYTLREVDTV 156
SYWFPLLLQKKKFHGYFKFQGQDTILDYTLREVDTV
Sbjct: 144 SYWFPLLLQKKKFHGYFKFQGQDTILDYTLREVDTV 179
>gi|40288276 nudix-type motif 1 isoform p18 [Homo sapiens]
Length = 156
Score = 328 bits (840), Expect = 1e-90
Identities = 156/156 (100%), Positives = 156/156 (100%)
Query: 1 MGASRLYTLVLVLQPQRVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLT 60
MGASRLYTLVLVLQPQRVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLT
Sbjct: 1 MGASRLYTLVLVLQPQRVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLT 60
Query: 61 VDALHKVGQIVFEFVGEPELMDVHVFCTDSIQGTPVESDEMRPCWFQLDQIPFKDMWPDD 120
VDALHKVGQIVFEFVGEPELMDVHVFCTDSIQGTPVESDEMRPCWFQLDQIPFKDMWPDD
Sbjct: 61 VDALHKVGQIVFEFVGEPELMDVHVFCTDSIQGTPVESDEMRPCWFQLDQIPFKDMWPDD 120
Query: 121 SYWFPLLLQKKKFHGYFKFQGQDTILDYTLREVDTV 156
SYWFPLLLQKKKFHGYFKFQGQDTILDYTLREVDTV
Sbjct: 121 SYWFPLLLQKKKFHGYFKFQGQDTILDYTLREVDTV 156
>gi|40288274 nudix-type motif 1 isoform p18 [Homo sapiens]
Length = 156
Score = 328 bits (840), Expect = 1e-90
Identities = 156/156 (100%), Positives = 156/156 (100%)
Query: 1 MGASRLYTLVLVLQPQRVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLT 60
MGASRLYTLVLVLQPQRVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLT
Sbjct: 1 MGASRLYTLVLVLQPQRVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLT 60
Query: 61 VDALHKVGQIVFEFVGEPELMDVHVFCTDSIQGTPVESDEMRPCWFQLDQIPFKDMWPDD 120
VDALHKVGQIVFEFVGEPELMDVHVFCTDSIQGTPVESDEMRPCWFQLDQIPFKDMWPDD
Sbjct: 61 VDALHKVGQIVFEFVGEPELMDVHVFCTDSIQGTPVESDEMRPCWFQLDQIPFKDMWPDD 120
Query: 121 SYWFPLLLQKKKFHGYFKFQGQDTILDYTLREVDTV 156
SYWFPLLLQKKKFHGYFKFQGQDTILDYTLREVDTV
Sbjct: 121 SYWFPLLLQKKKFHGYFKFQGQDTILDYTLREVDTV 156
>gi|8922792 nudix-type motif 15 [Homo sapiens]
Length = 164
Score = 45.4 bits (106), Expect = 2e-05
Identities = 39/130 (30%), Positives = 64/130 (49%), Gaps = 11/130 (8%)
Query: 15 PQRVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLTVDALHKVGQIVFEF 74
P+ VLLG +K GAG + GG ++ GET E+ A+RE EE+ L + +H +V F
Sbjct: 26 PRCVLLGKRKGSVGAGSFQLPGGHLEFGETWEECAQRETWEEAALHLKNVH-FASVVNSF 84
Query: 75 VGEPE------LMDVHVFCTDSIQGTPVESDEMRPCWFQLDQIPFKDMWPDDSYWFPLLL 128
+ + LM V T + VE E W + +P++++ P D ++ L
Sbjct: 85 IEKENYHYVTILMKGEVDVTHDSEPKNVE-PEKNESW---EWVPWEELPPLDQLFWGLRC 140
Query: 129 QKKKFHGYFK 138
K++ + FK
Sbjct: 141 LKEQGYDPFK 150
>gi|13899267 nudix-type motif 12 [Homo sapiens]
Length = 462
Score = 43.1 bits (100), Expect = 9e-05
Identities = 24/55 (43%), Positives = 35/55 (63%), Gaps = 3/55 (5%)
Query: 9 LVLVLQPQ--RVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLTV 61
++ V+ P + LLG +KR F G + G ++ GETIED RRE++EESG+ V
Sbjct: 326 IMQVIHPDGTKCLLGRQKR-FPPGMFTCLAGFIEPGETIEDAVRREVEEESGVKV 379
>gi|50593112 nudix-type motif 13 [Homo sapiens]
Length = 352
Score = 36.2 bits (82), Expect = 0.012
Identities = 27/104 (25%), Positives = 44/104 (42%), Gaps = 2/104 (1%)
Query: 9 LVLVLQPQRVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLTVDALHKVG 68
+ LV R LL ++ F G ++ G GE++E+ RRE+ EE GL V++L
Sbjct: 203 ITLVSDGTRCLLA-RQSSFPKGMYSALAGFCDIGESVEETIRREVAEEVGLEVESLQYYA 261
Query: 69 QIVFEFVGEPELMDVHVFCTDSIQGTPVESDEMR-PCWFQLDQI 111
+ F ++ H V E+ WF D++
Sbjct: 262 SQHWPFPSGSLMIACHATVKPGQTEIQVNLRELETAAWFSHDEV 305
>gi|118026927 nudix (nucleoside diphosphate linked moiety X)-type
motif 18 [Homo sapiens]
Length = 323
Score = 33.9 bits (76), Expect = 0.057
Identities = 29/112 (25%), Positives = 52/112 (46%), Gaps = 18/112 (16%)
Query: 10 VLVLQPQRVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGL-----TVDAL 64
V + + VLL + + G W G+++ GETI + +RE++EE+GL T+ ++
Sbjct: 49 VFLSEQDEVLLIQEAKRECRGSWYLPAGRMEPGETIVEALQREVKEEAGLHCEPETLLSV 108
Query: 65 HKVGQ--IVFEFVGEPELMDVHVFCTDSIQGTPVESD--EMRPCWFQLDQIP 112
+ G + F F+ P T I T E+D ++ W+ +P
Sbjct: 109 EERGPSWVRFVFLARP---------TGGILKTSKEADAESLQAAWYPRTSLP 151
>gi|62543567 nudix (nucleoside diphosphate linked moiety X)-type
motif 17 [Homo sapiens]
Length = 328
Score = 29.3 bits (64), Expect = 1.4
Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Query: 9 LVLVLQPQRVLLGMKKRGFGAGR--WNGFGGKVQEGETIEDGARRELQEESGL 59
++L + VLL + R W GG V+ E + DG REL EESGL
Sbjct: 97 VILQSSDKTVLLTRRARTLSVSPNLWVPPGGHVELEEELLDGGLRELWEESGL 149
>gi|89111135 ATP-binding cassette protein C12 [Homo sapiens]
Length = 1359
Score = 28.9 bits (63), Expect = 1.8
Identities = 16/62 (25%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 39 VQEGETIEDGARRELQEESGLTVDALHKVGQIVFEFVGEPELMDVHVFCTDSIQGTPVES 98
+++GE E G +EL EE G +H + + F+ +PE + + ++ + +P E
Sbjct: 674 LEDGEICEKGTHKELMEERGRYAKLIHNLRGLQFK---DPEHL-YNAAMVEAFKESPAER 729
Query: 99 DE 100
+E
Sbjct: 730 EE 731
>gi|37594464 nudix-type motif 5 [Homo sapiens]
Length = 219
Score = 28.1 bits (61), Expect = 3.2
Identities = 13/26 (50%), Positives = 17/26 (65%)
Query: 37 GKVQEGETIEDGARRELQEESGLTVD 62
G + +GET E A REL+EE+G D
Sbjct: 97 GLIDDGETPEAAALRELEEETGYKGD 122
>gi|115583677 sodium channel, voltage-gated, type I, alpha [Homo
sapiens]
Length = 1998
Score = 27.7 bits (60), Expect = 4.1
Identities = 18/88 (20%), Positives = 32/88 (36%), Gaps = 9/88 (10%)
Query: 36 GGKVQEGETIEDGARRELQEESGLTVDALHKVGQIVFEFVGEPELMDVHVFCTDSIQGTP 95
G + EG T E R+ +++D L Q M + T++++
Sbjct: 665 GQLLPEGTTTETEMRKRRSSSFHVSMDFLEDPSQ-------RQRAMSIASILTNTVEELE 717
Query: 96 VESDEMRPCWFQLDQIPFKDMWPDDSYW 123
+ PCW++ I +W YW
Sbjct: 718 ESRQKCPPCWYKFSNIFL--IWDCSPYW 743
>gi|46395496 G protein-coupled receptor for asthma susceptibility
isoform A [Homo sapiens]
Length = 371
Score = 27.7 bits (60), Expect = 4.1
Identities = 8/12 (66%), Positives = 10/12 (83%)
Query: 116 MWPDDSYWFPLL 127
+WPDDSYW P +
Sbjct: 200 LWPDDSYWTPYM 211
>gi|46391085 G protein-coupled receptor for asthma susceptibility
isoform B [Homo sapiens]
Length = 377
Score = 27.7 bits (60), Expect = 4.1
Identities = 8/12 (66%), Positives = 10/12 (83%)
Query: 116 MWPDDSYWFPLL 127
+WPDDSYW P +
Sbjct: 200 LWPDDSYWTPYM 211
>gi|154689817 beta 1,3-galactosyltransferase-like [Homo sapiens]
Length = 498
Score = 27.7 bits (60), Expect = 4.1
Identities = 11/36 (30%), Positives = 20/36 (55%)
Query: 56 ESGLTVDALHKVGQIVFEFVGEPELMDVHVFCTDSI 91
+S T+D H++ +++ G P L V FCT+ +
Sbjct: 210 KSDFTIDLKHEIALYIWDKGGGPPLTPVPEFCTNDV 245
>gi|45505130 TAO kinase 2 isoform 2 [Homo sapiens]
Length = 1235
Score = 27.7 bits (60), Expect = 4.1
Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 6/62 (9%)
Query: 19 LLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLTVDALHKVGQIVFEFV-GE 77
+LG ++ G R G +EG T+E +R L EESG + K G +V E V G
Sbjct: 788 MLGEEEEAVGERRILG-----KEGATLEPKQQRILGEESGAPSPSPQKHGSLVDEEVWGL 842
Query: 78 PE 79
PE
Sbjct: 843 PE 844
>gi|156071456 serpin peptidase inhibitor, clade B, member 11 [Homo
sapiens]
Length = 392
Score = 27.7 bits (60), Expect = 4.1
Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
Query: 30 GRWNGFGGKVQEGETIEDGARRELQEESGLTVDALHKVGQIVFEFVGEPEL 80
G+W K Q ET++ +L E +TV+ ++++G FV EP++
Sbjct: 186 GQWQN---KFQVRETVKSPF--QLSEGKNVTVEMMYQIGTFKLAFVKEPQM 231
>gi|19923855 SYAP1 protein [Homo sapiens]
Length = 352
Score = 27.3 bits (59), Expect = 5.4
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 5/58 (8%)
Query: 20 LGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLTVDALHKV---GQIVFEF 74
LG+++ G G+ NG Q ET+ + A ELQ+ + LH+ G +F F
Sbjct: 9 LGLQQPVAGGGQPNGDAPPEQPSETVAESAEEELQQAG--DQELLHQAKDFGNYLFNF 64
>gi|4758822 nephrin precursor [Homo sapiens]
Length = 1241
Score = 26.9 bits (58), Expect = 7.0
Identities = 15/52 (28%), Positives = 23/52 (44%)
Query: 74 FVGEPELMDVHVFCTDSIQGTPVESDEMRPCWFQLDQIPFKDMWPDDSYWFP 125
F GE E M D ++ T S P + ++ P+ WP+D+Y P
Sbjct: 1162 FTGEDEDMAFPGHLYDEVERTYPPSGAWGPLYDEVQMGPWDLHWPEDTYQDP 1213
>gi|11968023 zinc finger protein 106 homolog [Homo sapiens]
Length = 1883
Score = 26.6 bits (57), Expect = 9.2
Identities = 9/20 (45%), Positives = 15/20 (75%)
Query: 96 VESDEMRPCWFQLDQIPFKD 115
+ SD+ RP W + D+IP++D
Sbjct: 94 INSDDRRPQWRREDRIPYQD 113
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.323 0.142 0.448
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,079,683
Number of Sequences: 37866
Number of extensions: 278217
Number of successful extensions: 574
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 554
Number of HSP's gapped (non-prelim): 23
length of query: 156
length of database: 18,247,518
effective HSP length: 94
effective length of query: 62
effective length of database: 14,688,114
effective search space: 910663068
effective search space used: 910663068
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.