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Search of human proteins with 40255005
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|40255005 plexin domain containing 2 precursor [Homo sapiens]
(529 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|40255005 plexin domain containing 2 precursor [Homo sapiens] 1083 0.0
gi|15011862 plexin domain containing 1 precursor [Homo sapiens] 499 e-141
gi|34013528 zinc finger protein 512B [Homo sapiens] 38 0.026
gi|113722116 plexin A2 [Homo sapiens] 35 0.17
gi|5032223 plexin C1 [Homo sapiens] 34 0.38
gi|169167859 PREDICTED: hypothetical protein, partial [Homo sapi... 32 1.1
gi|49355818 plexin A1 [Homo sapiens] 32 1.1
gi|215422425 CD164 molecule, sialomucin isoform 4 [Homo sapiens] 32 1.9
gi|21361274 CD164 molecule, sialomucin isoform 1 [Homo sapiens] 32 1.9
gi|42741655 met proto-oncogene isoform b precursor [Homo sapiens] 31 2.5
gi|188595716 met proto-oncogene isoform a precursor [Homo sapiens] 31 2.5
gi|194272180 plexin B1 [Homo sapiens] 31 2.5
gi|40254442 plexin B1 [Homo sapiens] 31 2.5
gi|100913218 transmembrane protein 123 precursor [Homo sapiens] 31 2.5
gi|133930786 egf-like module-containing mucin-like receptor 3 [H... 31 2.5
gi|40254891 hypothetical protein FLJ20674 [Homo sapiens] 31 3.2
gi|239740773 PREDICTED: similar to diffuse panbronchiolitis crit... 31 3.2
gi|4504777 integrin, beta 7 [Homo sapiens] 31 3.2
gi|215422421 CD164 molecule, sialomucin isoform 2 [Homo sapiens] 31 3.2
gi|32967601 ankyrin 3 isoform 1 [Homo sapiens] 31 3.2
gi|59710104 plexin A3 [Homo sapiens] 31 3.2
gi|91982772 mucin 17 [Homo sapiens] 30 4.2
gi|74048554 cancer susceptibility candidate 5 isoform 2 [Homo sa... 30 5.5
gi|74048514 cancer susceptibility candidate 5 isoform 1 [Homo sa... 30 5.5
gi|169214154 PREDICTED: hypothetical protein [Homo sapiens] 30 5.5
gi|169213511 PREDICTED: hypothetical protein [Homo sapiens] 30 5.5
gi|150010558 myosin, heavy polypeptide 15 [Homo sapiens] 30 5.5
gi|153946393 macrophage stimulating 1 receptor precursor [Homo s... 30 7.1
gi|113417084 PREDICTED: hypothetical protein [Homo sapiens] 30 7.1
gi|13375695 cysteinyl-tRNA synthetase 2, mitochondrial [Homo sap... 30 7.1
>gi|40255005 plexin domain containing 2 precursor [Homo sapiens]
Length = 529
Score = 1083 bits (2800), Expect = 0.0
Identities = 529/529 (100%), Positives = 529/529 (100%)
Query: 1 MARFPKADLAAAGVMLLCHFFTDQFQFADGKPGDQILDWQYGVTQAFPHTEEEVEVDSHA 60
MARFPKADLAAAGVMLLCHFFTDQFQFADGKPGDQILDWQYGVTQAFPHTEEEVEVDSHA
Sbjct: 1 MARFPKADLAAAGVMLLCHFFTDQFQFADGKPGDQILDWQYGVTQAFPHTEEEVEVDSHA 60
Query: 61 YSHRWKRNLDFLKAVDTNRASVGQDSPEPRSFTDLLLDDGQDNNTQIEEDTDHNYYISRI 120
YSHRWKRNLDFLKAVDTNRASVGQDSPEPRSFTDLLLDDGQDNNTQIEEDTDHNYYISRI
Sbjct: 61 YSHRWKRNLDFLKAVDTNRASVGQDSPEPRSFTDLLLDDGQDNNTQIEEDTDHNYYISRI 120
Query: 121 YGPSDSASRDLWVNIDQMEKDKVKIHGILSNTHRQAARVNLSFDFPFYGHFLREITVATG 180
YGPSDSASRDLWVNIDQMEKDKVKIHGILSNTHRQAARVNLSFDFPFYGHFLREITVATG
Sbjct: 121 YGPSDSASRDLWVNIDQMEKDKVKIHGILSNTHRQAARVNLSFDFPFYGHFLREITVATG 180
Query: 181 GFIYTGEVVHRMLTATQYIAPLMANFDPSVSRNSTVRYFDNGTALVVQWDHVHLQDNYNL 240
GFIYTGEVVHRMLTATQYIAPLMANFDPSVSRNSTVRYFDNGTALVVQWDHVHLQDNYNL
Sbjct: 181 GFIYTGEVVHRMLTATQYIAPLMANFDPSVSRNSTVRYFDNGTALVVQWDHVHLQDNYNL 240
Query: 241 GSFTFQATLLMDGRIIFGYKEIPVLVTQISSTNHPVKVGLSDAFVVVHRIQQIPNVRRRT 300
GSFTFQATLLMDGRIIFGYKEIPVLVTQISSTNHPVKVGLSDAFVVVHRIQQIPNVRRRT
Sbjct: 241 GSFTFQATLLMDGRIIFGYKEIPVLVTQISSTNHPVKVGLSDAFVVVHRIQQIPNVRRRT 300
Query: 301 IYEYHRVELQMSKITNISAVEMTPLPTCLQFNRCGPCVSSQIGFNCSWCSKLQRCSSGFD 360
IYEYHRVELQMSKITNISAVEMTPLPTCLQFNRCGPCVSSQIGFNCSWCSKLQRCSSGFD
Sbjct: 301 IYEYHRVELQMSKITNISAVEMTPLPTCLQFNRCGPCVSSQIGFNCSWCSKLQRCSSGFD 360
Query: 361 RHRQDWVDSGCPEESKEKMCENTEPVETSSRTTTTVGATTTQFRVLTTTRRAVTSQFPTS 420
RHRQDWVDSGCPEESKEKMCENTEPVETSSRTTTTVGATTTQFRVLTTTRRAVTSQFPTS
Sbjct: 361 RHRQDWVDSGCPEESKEKMCENTEPVETSSRTTTTVGATTTQFRVLTTTRRAVTSQFPTS 420
Query: 421 LPTEDDTKIALHLKDNGASTDDSAAEKKGGTLHAGLIIGILILVLIVATAILVTVYMYHH 480
LPTEDDTKIALHLKDNGASTDDSAAEKKGGTLHAGLIIGILILVLIVATAILVTVYMYHH
Sbjct: 421 LPTEDDTKIALHLKDNGASTDDSAAEKKGGTLHAGLIIGILILVLIVATAILVTVYMYHH 480
Query: 481 PTSAASIFFIERRPSRWPAMKFRRGSGHPAYAEVEPVGEKEGFIVSEQC 529
PTSAASIFFIERRPSRWPAMKFRRGSGHPAYAEVEPVGEKEGFIVSEQC
Sbjct: 481 PTSAASIFFIERRPSRWPAMKFRRGSGHPAYAEVEPVGEKEGFIVSEQC 529
>gi|15011862 plexin domain containing 1 precursor [Homo sapiens]
Length = 500
Score = 499 bits (1285), Expect = e-141
Identities = 249/436 (57%), Positives = 322/436 (73%), Gaps = 8/436 (1%)
Query: 95 LLLDDGQDNNTQIEEDTDHNYYISRIYGPSDSASRDLWVNIDQMEKDKVKIHGILSNTHR 154
L +D DN T++ ED +H+YY+SR+YGPS+ SR+LWV++ + + +VKIH ILSNTHR
Sbjct: 72 LAMDTLPDNRTRVVED-NHSYYVSRLYGPSEPHSRELWVDVAEANRSQVKIHTILSNTHR 130
Query: 155 QAARVNLSFDFPFYGHFLREITVATGGFIYTGEVVHRMLTATQYIAPLMANFDPSVSRNS 214
QA+RV LSFDFPFYGH LR+IT+ATGGFI+ G+V+HRMLTATQY+APLMANF+P S NS
Sbjct: 131 QASRVVLSFDFPFYGHPLRQITIATGGFIFMGDVIHRMLTATQYVAPLMANFNPGYSDNS 190
Query: 215 TVRYFDNGTALVVQWDHVHLQDNYNLGSFTFQATLLMDGRIIFGYKEIPVLVTQISSTNH 274
TV YFDNGT VVQWDHV+LQ + GSFTFQA L DGRI+F YKEIP+ V +ISS+ H
Sbjct: 191 TVVYFDNGTVFVVQWDHVYLQGWEDKGSFTFQAALHHDGRIVFAYKEIPMSVPEISSSQH 250
Query: 275 PVKVGLSDAFVVVHRIQQIPNVRRRTIYEYHRVELQMSKITNISAVEMTPLPTCLQFNRC 334
PVK GLSDAF++++ +P RRR+I+EYHR+EL SK+T++SAVE TPLPTCLQ C
Sbjct: 251 PVKTGLSDAFMILNPSPDVPESRRRSIFEYHRIELDPSKVTSMSAVEFTPLPTCLQHRSC 310
Query: 335 GPCVSSQIGFNCSWCSKLQRCSSGFDRHRQDWVDSGCPEESKEKMCENTEPVETSSRTTT 394
C+SS + FNCSWC LQRCSSGFDR+RQ+W+D GC +E++ +MCE+ + + S +
Sbjct: 311 DACMSSDLTFNCSWCHVLQRCSSGFDRYRQEWMDYGCAQEAEGRMCEDFQDEDHDSASPD 370
Query: 395 TVGATTTQFRVLTTTRRAVTSQFPTSLPTEDDTKIALHLKDNGASTDDSAAEKKGGTLHA 454
T + + LTTT +S F SL TEDDTK+ + +G ++ + + KG +H
Sbjct: 371 T--SFSPYDGDLTTTS---SSLFIDSLTTEDDTKLNPYAGGDGLQ-NNLSPKTKGTPVHL 424
Query: 455 GLIIGILILVLIVATAILVTVYMYHHPTSAASIFFIERRPSRWPAMKFRRGSGHPAYAEV 514
G I+GI++ VL+VA IL +Y+ HPTS A++FFIERRP WPAMKFR H YAEV
Sbjct: 425 GTIVGIVLAVLLVAAIILAGIYINGHPTSNAALFFIERRPHHWPAMKFRSHPDHSTYAEV 484
Query: 515 EPVG-EKEGFIVSEQC 529
EP G EKEGF+ +EQC
Sbjct: 485 EPSGHEKEGFMEAEQC 500
>gi|34013528 zinc finger protein 512B [Homo sapiens]
Length = 892
Score = 37.7 bits (86), Expect = 0.026
Identities = 23/75 (30%), Positives = 32/75 (42%), Gaps = 2/75 (2%)
Query: 333 RCG--PCVSSQIGFNCSWCSKLQRCSSGFDRHRQDWVDSGCPEESKEKMCENTEPVETSS 390
RCG PC F C+ C K R +G D H + + PEE +K E +P+
Sbjct: 617 RCGKPPCEVDSPSFPCTHCGKTYRSKAGHDYHVRSEHTAPPPEEPTDKSPEAEDPLGVER 676
Query: 391 RTTTTVGATTTQFRV 405
+ V T+ Q V
Sbjct: 677 TPSGRVRRTSAQVAV 691
>gi|113722116 plexin A2 [Homo sapiens]
Length = 1894
Score = 35.0 bits (79), Expect = 0.17
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Query: 320 VEMTPLPTCLQFNRCGPCVSSQIGFNCSWCSKLQRCSSGFDRHRQDW 366
V P+ +C Q+ CG C+SS +C WC+ CS D+ +Q W
Sbjct: 503 VTRVPVESCEQYTTCGECLSSG-DPHCGWCALHNMCSRR-DKCQQAW 547
Score = 31.2 bits (69), Expect = 2.5
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 330 QFNRCGPCVSSQIGFNCSWCSKLQRCS 356
Q CG C+ + F C WCS +RC+
Sbjct: 807 QRESCGLCLKADRKFECGWCSGERRCT 833
>gi|5032223 plexin C1 [Homo sapiens]
Length = 1568
Score = 33.9 bits (76), Expect = 0.38
Identities = 17/67 (25%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Query: 328 CLQFNRCGPCVSSQIGFNCSWCSKLQRCSSGFDRHRQDWVDSGCPEESKEKMCENTEPVE 387
C + C C+++ +C WC LQRC+ D + +++ S K C + +
Sbjct: 455 CNKHKSCSECLTATDP-HCGWCHSLQRCTFQGDCVHSENLENWLDISSGAKKCPKIQIIR 513
Query: 388 TSSRTTT 394
+S TT
Sbjct: 514 SSKEKTT 520
>gi|169167859 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 214
Score = 32.3 bits (72), Expect = 1.1
Identities = 15/40 (37%), Positives = 23/40 (57%)
Query: 388 TSSRTTTTVGATTTQFRVLTTTRRAVTSQFPTSLPTEDDT 427
T++ TTTT+ TTT +TTT +T+ T++ T T
Sbjct: 60 TTTTTTTTITTTTTTTTTITTTTTTITTTTTTTITTTTTT 99
Score = 31.2 bits (69), Expect = 2.5
Identities = 15/41 (36%), Positives = 22/41 (53%)
Query: 383 TEPVETSSRTTTTVGATTTQFRVLTTTRRAVTSQFPTSLPT 423
T + T++ TTTT+ TTT TTT T+ T++ T
Sbjct: 65 TTTITTTTTTTTTITTTTTTITTTTTTTITTTTTTTTTITT 105
Score = 29.6 bits (65), Expect = 7.1
Identities = 15/41 (36%), Positives = 21/41 (51%)
Query: 383 TEPVETSSRTTTTVGATTTQFRVLTTTRRAVTSQFPTSLPT 423
T T+ TTTT+ TTT + TTT +T+ T+ T
Sbjct: 144 TTTTTTTITTTTTITTTTTTTTITTTTTTTITTSTITTTTT 184
Score = 29.6 bits (65), Expect = 7.1
Identities = 15/41 (36%), Positives = 21/41 (51%)
Query: 383 TEPVETSSRTTTTVGATTTQFRVLTTTRRAVTSQFPTSLPT 423
T + TS+ TTTT T T +TTT T+ T++ T
Sbjct: 171 TTTITTSTITTTTTSTTITTTTTITTTTTITTTTTTTTITT 211
>gi|49355818 plexin A1 [Homo sapiens]
Length = 1873
Score = 32.3 bits (72), Expect = 1.1
Identities = 21/73 (28%), Positives = 29/73 (39%), Gaps = 14/73 (19%)
Query: 334 CGPCVSSQIGFNCSWCSKLQRCSSGFDRHR------QDWV-----DSGCPEESKEKMCEN 382
CG C+ + F C WC +RCS RH W+ S C + K+
Sbjct: 793 CGLCLKADPRFECGWCVAERRCSL---RHHCAADTPASWMHARHGSSRCTDPKILKLSPE 849
Query: 383 TEPVETSSRTTTT 395
T P + +R T T
Sbjct: 850 TGPRQGGTRLTIT 862
>gi|215422425 CD164 molecule, sialomucin isoform 4 [Homo sapiens]
Length = 189
Score = 31.6 bits (70), Expect = 1.9
Identities = 32/132 (24%), Positives = 51/132 (38%), Gaps = 22/132 (16%)
Query: 311 MSKITNISAVEMTPLP--------TCLQFNRCGPCVS-SQIGFNCSW--CSKLQRCSSGF 359
++ I+N+++ +T LP TC N C C + S + C W C CS
Sbjct: 36 LAPISNVTSAPVTSLPLVTTPAPETCEGRNSCVSCFNVSVVNTTCFWIECKDESYCS--- 92
Query: 360 DRHRQDWVDSGCPEESKEKMCE--NTEPVETSSRTT--TTVGATTTQFRVLTTTRRAVTS 415
+ S C + C PV T++ T T + +T + +TT+ +
Sbjct: 93 ----HNSTVSDCQVGNTTDFCSVSTATPVPTANSTAKPTVQPSPSTTSKTVTTSGTTNNT 148
Query: 416 QFPTSLPTEDDT 427
PTS P T
Sbjct: 149 VTPTSQPVRKST 160
>gi|21361274 CD164 molecule, sialomucin isoform 1 [Homo sapiens]
Length = 197
Score = 31.6 bits (70), Expect = 1.9
Identities = 32/132 (24%), Positives = 51/132 (38%), Gaps = 22/132 (16%)
Query: 311 MSKITNISAVEMTPLP--------TCLQFNRCGPCVS-SQIGFNCSW--CSKLQRCSSGF 359
++ I+N+++ +T LP TC N C C + S + C W C CS
Sbjct: 36 LAPISNVTSAPVTSLPLVTTPAPETCEGRNSCVSCFNVSVVNTTCFWIECKDESYCS--- 92
Query: 360 DRHRQDWVDSGCPEESKEKMCE--NTEPVETSSRTT--TTVGATTTQFRVLTTTRRAVTS 415
+ S C + C PV T++ T T + +T + +TT+ +
Sbjct: 93 ----HNSTVSDCQVGNTTDFCSVSTATPVPTANSTAKPTVQPSPSTTSKTVTTSGTTNNT 148
Query: 416 QFPTSLPTEDDT 427
PTS P T
Sbjct: 149 VTPTSQPVRKST 160
>gi|42741655 met proto-oncogene isoform b precursor [Homo sapiens]
Length = 1390
Score = 31.2 bits (69), Expect = 2.5
Identities = 22/85 (25%), Positives = 35/85 (41%), Gaps = 15/85 (17%)
Query: 317 ISAVEMTPLPT----CLQFNRCGPCVSSQIGFNCSWCS----KLQRCSSGFDRHRQDWVD 368
I+ ++T +P C F C C+S+ C WC + + C SG W
Sbjct: 505 ITGKKITKIPLNGLGCRHFQSCSQCLSAPPFVQCGWCHDKCVRSEECLSG------TWTQ 558
Query: 369 SGCPEESKEKMCENTEPVETSSRTT 393
C + K+ N+ P+E +R T
Sbjct: 559 QIC-LPAIYKVFPNSAPLEGGTRLT 582
>gi|188595716 met proto-oncogene isoform a precursor [Homo sapiens]
Length = 1408
Score = 31.2 bits (69), Expect = 2.5
Identities = 22/85 (25%), Positives = 35/85 (41%), Gaps = 15/85 (17%)
Query: 317 ISAVEMTPLPT----CLQFNRCGPCVSSQIGFNCSWCS----KLQRCSSGFDRHRQDWVD 368
I+ ++T +P C F C C+S+ C WC + + C SG W
Sbjct: 505 ITGKKITKIPLNGLGCRHFQSCSQCLSAPPFVQCGWCHDKCVRSEECLSG------TWTQ 558
Query: 369 SGCPEESKEKMCENTEPVETSSRTT 393
C + K+ N+ P+E +R T
Sbjct: 559 QIC-LPAIYKVFPNSAPLEGGTRLT 582
>gi|194272180 plexin B1 [Homo sapiens]
Length = 2135
Score = 31.2 bits (69), Expect = 2.5
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 5/60 (8%)
Query: 318 SAVEMTPLPTCLQFNRCGPCVSSQIGFNCSWCSKLQRCSSGFDRHR----QDWVDSGCPE 373
S + P+ +C Q C C++ + + C WC L RCS + R + W+ S PE
Sbjct: 472 STLLKVPVASCAQHLDCASCLAHRDPY-CGWCVLLGRCSRRSECSRGQGPEQWLWSFQPE 530
>gi|40254442 plexin B1 [Homo sapiens]
Length = 2135
Score = 31.2 bits (69), Expect = 2.5
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 5/60 (8%)
Query: 318 SAVEMTPLPTCLQFNRCGPCVSSQIGFNCSWCSKLQRCSSGFDRHR----QDWVDSGCPE 373
S + P+ +C Q C C++ + + C WC L RCS + R + W+ S PE
Sbjct: 472 STLLKVPVASCAQHLDCASCLAHRDPY-CGWCVLLGRCSRRSECSRGQGPEQWLWSFQPE 530
>gi|100913218 transmembrane protein 123 precursor [Homo sapiens]
Length = 208
Score = 31.2 bits (69), Expect = 2.5
Identities = 28/112 (25%), Positives = 44/112 (39%), Gaps = 6/112 (5%)
Query: 374 ESKEKMCENTEPVETSSRTT-----TTVGATTTQFRVLTTTRRAVTSQFPTSLPTEDDTK 428
+S +P S+ TT T + +TT + TT+ TSQ TS T
Sbjct: 80 DSSNTTVTTMKPTAASNTTTPGMVSTNMTSTTLKSTPKTTSVSQNTSQISTSTMTVTHNS 139
Query: 429 IALHLKDNGASTDDSAAE-KKGGTLHAGLIIGILILVLIVATAILVTVYMYH 479
+ T +E KKG G +G ++L L V + + + MY+
Sbjct: 140 SVTSAASSVTITTTMHSEAKKGSKFDTGSFVGGIVLTLGVLSILYIGCKMYY 191
>gi|133930786 egf-like module-containing mucin-like receptor 3 [Homo
sapiens]
Length = 652
Score = 31.2 bits (69), Expect = 2.5
Identities = 25/75 (33%), Positives = 34/75 (45%), Gaps = 14/75 (18%)
Query: 324 PLPTCLQFNRCGPCVSSQIGFNCSWCSKLQ-----RCSSGFDRHRQDWVDSGCPEESKEK 378
PL TC N C P S GFN + C ++ +C G+ H + S S E
Sbjct: 61 PLETCNDINECTPPYSVYCGFN-AVCYNVEGSFYCQCVPGYRLHSGNEQFS----NSNEN 115
Query: 379 MCENTEPVETSSRTT 393
C++T TSS+TT
Sbjct: 116 TCQDT----TSSKTT 126
>gi|40254891 hypothetical protein FLJ20674 [Homo sapiens]
Length = 540
Score = 30.8 bits (68), Expect = 3.2
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 7/58 (12%)
Query: 95 LLLDDGQDNNTQIE---EDTDHNYYISRIYGPSDSASRDLWVNIDQMEKDKVKIHGIL 149
L+ DGQ++ I +D D YYI R P ++W+++ K+ + I GI+
Sbjct: 362 LITQDGQNSTLTIHNCSQDLDEGYYICRADSPVGVREMEIWLSV----KEPLNIGGIV 415
>gi|239740773 PREDICTED: similar to diffuse panbronchiolitis critical
region 1 [Homo sapiens]
Length = 1400
Score = 30.8 bits (68), Expect = 3.2
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 383 TEPVETSSRTTTTVGATTTQFRVLTTTRRAVT-SQFPTSLPTEDDTKIALHLKDNGASTD 441
++ + T+S+TTTT T+ V TTT + S+ PT+ T D A+ K +G + +
Sbjct: 1156 SKTMTTASKTTTTSTITSLPTTVFTTTSKITAGSEIPTA-STTDSATTAISTKASGTTVE 1214
Query: 442 DS 443
+
Sbjct: 1215 SA 1216
>gi|4504777 integrin, beta 7 [Homo sapiens]
Length = 798
Score = 30.8 bits (68), Expect = 3.2
Identities = 25/97 (25%), Positives = 40/97 (41%), Gaps = 10/97 (10%)
Query: 322 MTPLPTCLQFNRCGPCVSSQIGFNCSWCSKLQRCSSGFDR-----HRQDWVDSGCPEESK 376
++ L +C C C+ S +C+WC +L +SG R++ + GCP E
Sbjct: 39 LSMLGSCQPAPSCQKCILSHP--SCAWCKQLNFTASGEAEARRCARREELLARGCPLEEL 96
Query: 377 EKMCENTEPVETSSRTTTTVGATTTQF---RVLTTTR 410
E+ E ++ + G TQ RV T R
Sbjct: 97 EEPRGQQEVLQDQPLSQGARGEGATQLAPQRVRVTLR 133
>gi|215422421 CD164 molecule, sialomucin isoform 2 [Homo sapiens]
Length = 184
Score = 30.8 bits (68), Expect = 3.2
Identities = 28/126 (22%), Positives = 46/126 (36%), Gaps = 23/126 (18%)
Query: 311 MSKITNISAVEMTPLP--------TCLQFNRCGPCVS-SQIGFNCSWCSKLQRCSSGFDR 361
++ I+N+++ +T LP TC N C C + S + C W C
Sbjct: 36 LAPISNVTSAPVTSLPLVTTPAPETCEGRNSCVSCFNVSVVNTTCFWIE----CKD---- 87
Query: 362 HRQDWVDSGCPEESKEKMCENTEPVETSSRTTTTVGATTTQFRVLTTTRRAVTSQFPTSL 421
+S C S C+ + S T + +T + +TT+ + PTS
Sbjct: 88 ------ESYCSHNSTVSDCQVGNTTDFCSAKPTVQPSPSTTSKTVTTSGTTNNTVTPTSQ 141
Query: 422 PTEDDT 427
P T
Sbjct: 142 PVRKST 147
>gi|32967601 ankyrin 3 isoform 1 [Homo sapiens]
Length = 4377
Score = 30.8 bits (68), Expect = 3.2
Identities = 19/42 (45%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Query: 370 GCPEESKEKMCENTEPVETSSR--TTTTVGATTTQFRVLTTT 409
G PE+ K K + PV+ S TTTT ATTT TTT
Sbjct: 3936 GQPEKGKAKQLPSKLPVKVRSTCVTTTTTTATTTTTTTTTTT 3977
>gi|59710104 plexin A3 [Homo sapiens]
Length = 1871
Score = 30.8 bits (68), Expect = 3.2
Identities = 10/22 (45%), Positives = 12/22 (54%)
Query: 334 CGPCVSSQIGFNCSWCSKLQRC 355
CG C+ + FNC WC RC
Sbjct: 793 CGLCLKADPRFNCGWCISEHRC 814
>gi|91982772 mucin 17 [Homo sapiens]
Length = 4493
Score = 30.4 bits (67), Expect = 4.2
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 7/62 (11%)
Query: 368 DSGCPEESKEKMCENTEPVETSSRTTTTVGATTTQFRVLTTTRRAVTSQFPTSLPTEDDT 427
DS P S E + PV+TS+ TT+ AT++ TT A + PTS P+E T
Sbjct: 931 DSTTPVVSSEARTLSATPVDTSTPVTTSTEATSSP----TT---AEGTSIPTSTPSEGTT 983
Query: 428 KI 429
+
Sbjct: 984 PL 985
Score = 30.4 bits (67), Expect = 4.2
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 7/62 (11%)
Query: 369 SGCPEESKEKMCENTEPVETSSRTTTTVGATTTQFRVLTTTRRAVTSQFPTSLPTEDDTK 428
S P S E +T PV+TS+ TT+ A+++ TT A + PTS P+E T
Sbjct: 2405 STMPVVSSEASTHSTTPVDTSTPVTTSTEASSSP----TT---AEGTSIPTSPPSEGTTP 2457
Query: 429 IA 430
+A
Sbjct: 2458 LA 2459
Score = 29.6 bits (65), Expect = 7.1
Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 7/62 (11%)
Query: 369 SGCPEESKEKMCENTEPVETSSRTTTTVGATTTQFRVLTTTRRAVTSQFPTSLPTEDDTK 428
S P S E +T PV+TS+ TT+ A+ L+ T TS PTS P+E T
Sbjct: 3348 STTPVVSSEASTLSTTPVDTSTPVTTSTEAS------LSPTTAEGTS-IPTSSPSEGTTP 3400
Query: 429 IA 430
+A
Sbjct: 3401 LA 3402
>gi|74048554 cancer susceptibility candidate 5 isoform 2 [Homo
sapiens]
Length = 2316
Score = 30.0 bits (66), Expect = 5.5
Identities = 48/228 (21%), Positives = 88/228 (38%), Gaps = 38/228 (16%)
Query: 51 EEEVEVDSHAYSHRWKRNLDFLKAVDTNRASVGQDSPEPRSFTDLLLDDGQDN------- 103
E VD + S DF+K + T + S D P+ +F ++ + + N
Sbjct: 198 EVNFSVDQNTSSENKIDFNDFIKRLKTGKCSAFPDVPDKENF-EIPIYSKEPNSASSTHQ 256
Query: 104 -NTQIEEDTDHNYYISRIYGPSDSASRDLWVNIDQMEKDKVKIHGILSNTHRQAARVNLS 162
+ ++ED ++N I+R++ D +N Q I ++ + +R +
Sbjct: 257 MHVSLKED-ENNSNITRLFREKDDG-----MNFTQCH--TANIQTLIPTSSETNSRESKG 308
Query: 163 FDFPFYGHFLREITV--------ATGGFIYTGEVVHRMLTATQYIAPLMANFDPSVSRNS 214
D YG+ ++T ATG F E+ ++ TQ + + S N
Sbjct: 309 NDITIYGNDFMDLTFNHTLQILPATGNF---SEIENQ----TQNAMDVTTGYGTKASGNK 361
Query: 215 TVRYFDNGTAL----VVQWDHVHLQDNYNLGSFT--FQATLLMDGRII 256
TV TA + D +H+ ++ +G+ T T D RI+
Sbjct: 362 TVFKSKQNTAFQDLSINSADKIHITRSHIMGAETHIVSQTCNQDARIL 409
>gi|74048514 cancer susceptibility candidate 5 isoform 1 [Homo
sapiens]
Length = 2342
Score = 30.0 bits (66), Expect = 5.5
Identities = 48/228 (21%), Positives = 88/228 (38%), Gaps = 38/228 (16%)
Query: 51 EEEVEVDSHAYSHRWKRNLDFLKAVDTNRASVGQDSPEPRSFTDLLLDDGQDN------- 103
E VD + S DF+K + T + S D P+ +F ++ + + N
Sbjct: 224 EVNFSVDQNTSSENKIDFNDFIKRLKTGKCSAFPDVPDKENF-EIPIYSKEPNSASSTHQ 282
Query: 104 -NTQIEEDTDHNYYISRIYGPSDSASRDLWVNIDQMEKDKVKIHGILSNTHRQAARVNLS 162
+ ++ED ++N I+R++ D +N Q I ++ + +R +
Sbjct: 283 MHVSLKED-ENNSNITRLFREKDDG-----MNFTQCH--TANIQTLIPTSSETNSRESKG 334
Query: 163 FDFPFYGHFLREITV--------ATGGFIYTGEVVHRMLTATQYIAPLMANFDPSVSRNS 214
D YG+ ++T ATG F E+ ++ TQ + + S N
Sbjct: 335 NDITIYGNDFMDLTFNHTLQILPATGNF---SEIENQ----TQNAMDVTTGYGTKASGNK 387
Query: 215 TVRYFDNGTAL----VVQWDHVHLQDNYNLGSFT--FQATLLMDGRII 256
TV TA + D +H+ ++ +G+ T T D RI+
Sbjct: 388 TVFKSKQNTAFQDLSINSADKIHITRSHIMGAETHIVSQTCNQDARIL 435
>gi|169214154 PREDICTED: hypothetical protein [Homo sapiens]
Length = 737
Score = 30.0 bits (66), Expect = 5.5
Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Query: 382 NTEPVETSSRTTT-TVGATTTQFRVLTTTRRAVTSQFPTSLPTEDDTKIALHLKDNGAST 440
+T TSS +TT TV +T+T T+T + T TS T + + +
Sbjct: 177 STSTTSTSSNSTTSTVTSTSTSTSTSTSTSTSSTFTSTTSTSTTSTSTTSTSTSATSSIR 236
Query: 441 DDSAAEKKGGTLHAGLIIGILILV 464
+ +K+ G L + + G+ +LV
Sbjct: 237 KLTPHQKQCGALASAFLFGLSLLV 260
>gi|169213511 PREDICTED: hypothetical protein [Homo sapiens]
Length = 737
Score = 30.0 bits (66), Expect = 5.5
Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Query: 382 NTEPVETSSRTTT-TVGATTTQFRVLTTTRRAVTSQFPTSLPTEDDTKIALHLKDNGAST 440
+T TSS +TT TV +T+T T+T + T TS T + + +
Sbjct: 177 STSTTSTSSNSTTSTVTSTSTSTSTSTSTSTSSTFTSTTSTSTTSTSTTSTSTSATSSIR 236
Query: 441 DDSAAEKKGGTLHAGLIIGILILV 464
+ +K+ G L + + G+ +LV
Sbjct: 237 KLTPHQKQCGALASAFLFGLSLLV 260
>gi|150010558 myosin, heavy polypeptide 15 [Homo sapiens]
Length = 1946
Score = 30.0 bits (66), Expect = 5.5
Identities = 23/103 (22%), Positives = 48/103 (46%), Gaps = 10/103 (9%)
Query: 65 WKRNLDFLKAVDTNRASVGQDSPEPRSFTDLLLDDGQDNNTQIEEDTDHNYYISRIYGPS 124
W + +FL+ ++ A + Q S E +FT + +D Q+E++T S +
Sbjct: 1293 WSESGEFLRRLEEKEALINQLSREKSNFTRQI----EDLRGQLEKETKSQ---SALAHAL 1345
Query: 125 DSASRDLWVNIDQMEKD---KVKIHGILSNTHRQAARVNLSFD 164
A RD + +Q E++ K ++H LS + + + + ++
Sbjct: 1346 QKAQRDCDLLREQYEEEQEVKAELHRTLSKVNAEMVQWRMKYE 1388
>gi|153946393 macrophage stimulating 1 receptor precursor [Homo
sapiens]
Length = 1400
Score = 29.6 bits (65), Expect = 7.1
Identities = 18/72 (25%), Positives = 27/72 (37%), Gaps = 12/72 (16%)
Query: 326 PTCLQFNRCGPCVSSQIGFNCSWCSKL----QRCSSGFDRHRQDWVDSGCPEESKEKMCE 381
P C F CG C+ + C WC + + C W CP + E
Sbjct: 525 PGCRHFLTCGRCLRAWHFMGCGWCGNMCGQQKECPG-------SWQQDHCPPKLTE-FHP 576
Query: 382 NTEPVETSSRTT 393
++ P+ S+R T
Sbjct: 577 HSGPLRGSTRLT 588
>gi|113417084 PREDICTED: hypothetical protein [Homo sapiens]
Length = 194
Score = 29.6 bits (65), Expect = 7.1
Identities = 15/41 (36%), Positives = 22/41 (53%)
Query: 383 TEPVETSSRTTTTVGATTTQFRVLTTTRRAVTSQFPTSLPT 423
T + T++ TTTT TTT + TTT +T+ T+ T
Sbjct: 103 TTTITTTTTTTTTTTTTTTITTITTTTTTTITTTTTTTTIT 143
>gi|13375695 cysteinyl-tRNA synthetase 2, mitochondrial [Homo
sapiens]
Length = 564
Score = 29.6 bits (65), Expect = 7.1
Identities = 17/45 (37%), Positives = 23/45 (51%)
Query: 240 LGSFTFQATLLMDGRIIFGYKEIPVLVTQISSTNHPVKVGLSDAF 284
LGSF A M G++ G +L ++SST VK L+D F
Sbjct: 370 LGSFLEDARAYMKGQLACGSVREAMLWERLSSTKRAVKAALADDF 414
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.134 0.409
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,917,211
Number of Sequences: 37866
Number of extensions: 875617
Number of successful extensions: 3638
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 3357
Number of HSP's gapped (non-prelim): 271
length of query: 529
length of database: 18,247,518
effective HSP length: 107
effective length of query: 422
effective length of database: 14,195,856
effective search space: 5990651232
effective search space used: 5990651232
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.