Guide to the Human Genome
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Search of human proteins with 39932581

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|39932581 hypothetical protein LOC55051 isoform 2 [Homo
sapiens]
         (933 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|39932581 hypothetical protein LOC55051 isoform 2 [Homo sapiens]   1900   0.0  
gi|39932583 hypothetical protein LOC55051 isoform 1 [Homo sapiens]   1900   0.0  
gi|124256489 crooked neck-like 1 protein [Homo sapiens]                38   0.050
gi|19718769 engulfment and cell motility 2 [Homo sapiens]              36   0.19 
gi|33469947 engulfment and cell motility 2 [Homo sapiens]              36   0.19 
gi|239744307 PREDICTED: similar to hCG1991922 [Homo sapiens]           33   0.95 
gi|70980549 programmed cell death 11 [Homo sapiens]                    33   1.2  
gi|7661952 squamous cell carcinoma antigen recognized by T cells...    33   1.6  
gi|212275945 male-specific lethal 3-like 1 isoform a [Homo sapiens]    33   1.6  
gi|17975759 male-specific lethal 3-like 1 isoform b [Homo sapiens]     33   1.6  
gi|17975755 male-specific lethal 3-like 1 isoform d [Homo sapiens]     33   1.6  
gi|51243065 zinc finger CCHC-type and RNA binding motif 1 [Homo ...    32   2.1  
gi|22758136 MAP7 domain containing 2 [Homo sapiens]                    32   2.1  
gi|239749996 PREDICTED: similar to hCG1991922 [Homo sapiens]           32   2.8  
gi|169172639 PREDICTED: similar to U5 snRNP-associated 102 kDa p...    32   2.8  
gi|40807485 PRP6 pre-mRNA processing factor 6 homolog [Homo sapi...    32   2.8  
gi|38348298 ankyrin repeat domain 45 [Homo sapiens]                    32   2.8  
gi|239752551 PREDICTED: hypothetical protein [Homo sapiens]            32   3.6  
gi|115648142 centrosomal protein 164kDa [Homo sapiens]                 32   3.6  
gi|4504867 ring finger protein 8 isoform 1 [Homo sapiens]              31   4.7  
gi|47132591 protein kinase N1 isoform 1 [Homo sapiens]                 31   4.7  
gi|47132589 protein kinase N1 isoform 2 [Homo sapiens]                 31   4.7  
gi|222418637 golgi autoantigen, golgin subfamily a-like [Homo sa...    31   6.1  
gi|90819233 myeloid/lymphoid or mixed-lineage leukemia (trithora...    31   6.1  
gi|17865632 mitochondrial tumor suppressor 1 isoform 5 [Homo sap...    31   6.1  
gi|50348611 mitochondrial tumor suppressor 1 isoform 1 [Homo sap...    31   6.1  
gi|50348617 mitochondrial tumor suppressor 1 isoform 2 [Homo sap...    31   6.1  
gi|50348626 mitochondrial tumor suppressor 1 isoform 4 [Homo sap...    31   6.1  
gi|45331217 zinc finger protein 526 [Homo sapiens]                     31   6.1  
gi|148839346 seizure related 6 homolog isoform 2 [Homo sapiens]        31   6.1  

>gi|39932581 hypothetical protein LOC55051 isoform 2 [Homo sapiens]
          Length = 933

 Score = 1900 bits (4923), Expect = 0.0
 Identities = 933/933 (100%), Positives = 933/933 (100%)

Query: 1   MNIDGVAISSKTEPPSSEPISFIPVKDLEDAAPVTTWLNPLGIYDQSTTHWLQGQGPPEQ 60
           MNIDGVAISSKTEPPSSEPISFIPVKDLEDAAPVTTWLNPLGIYDQSTTHWLQGQGPPEQ
Sbjct: 1   MNIDGVAISSKTEPPSSEPISFIPVKDLEDAAPVTTWLNPLGIYDQSTTHWLQGQGPPEQ 60

Query: 61  ESKQPDAQPDSESAALKAKVEEFNRRVRENPRDTQLWMAFVAFQDEVMKSPGLYAIEEGE 120
           ESKQPDAQPDSESAALKAKVEEFNRRVRENPRDTQLWMAFVAFQDEVMKSPGLYAIEEGE
Sbjct: 61  ESKQPDAQPDSESAALKAKVEEFNRRVRENPRDTQLWMAFVAFQDEVMKSPGLYAIEEGE 120

Query: 121 QEKRKRSLKLILEKKLAILERAIESNQSSVDLKLAKLKLCTEFWEPSTLVKEWQKLIFLH 180
           QEKRKRSLKLILEKKLAILERAIESNQSSVDLKLAKLKLCTEFWEPSTLVKEWQKLIFLH
Sbjct: 121 QEKRKRSLKLILEKKLAILERAIESNQSSVDLKLAKLKLCTEFWEPSTLVKEWQKLIFLH 180

Query: 181 PNNTALWQKYLLFCQSQFSTFSISKIHSLYGKCLSTLSAVKDGSILSHPALPGTEEAMFA 240
           PNNTALWQKYLLFCQSQFSTFSISKIHSLYGKCLSTLSAVKDGSILSHPALPGTEEAMFA
Sbjct: 181 PNNTALWQKYLLFCQSQFSTFSISKIHSLYGKCLSTLSAVKDGSILSHPALPGTEEAMFA 240

Query: 241 LFLQQCHFLRQAGHSEKAISLFQAMVDFTFFKPDSVKDLPTKGQVEFFEPFWDSGEPRAG 300
           LFLQQCHFLRQAGHSEKAISLFQAMVDFTFFKPDSVKDLPTKGQVEFFEPFWDSGEPRAG
Sbjct: 241 LFLQQCHFLRQAGHSEKAISLFQAMVDFTFFKPDSVKDLPTKGQVEFFEPFWDSGEPRAG 300

Query: 301 EKGARGWKAWMHQQERGGWVVINPDEDDDEPEEDDQEIKDKTLPRWQIWLAAERSRDQRH 360
           EKGARGWKAWMHQQERGGWVVINPDEDDDEPEEDDQEIKDKTLPRWQIWLAAERSRDQRH
Sbjct: 301 EKGARGWKAWMHQQERGGWVVINPDEDDDEPEEDDQEIKDKTLPRWQIWLAAERSRDQRH 360

Query: 361 WRPWRPDKTKKQTEEDCEDPERQVLFDDIGQSLIRLSSHDLQFQLVEAFLQFLGVPSGFT 420
           WRPWRPDKTKKQTEEDCEDPERQVLFDDIGQSLIRLSSHDLQFQLVEAFLQFLGVPSGFT
Sbjct: 361 WRPWRPDKTKKQTEEDCEDPERQVLFDDIGQSLIRLSSHDLQFQLVEAFLQFLGVPSGFT 420

Query: 421 PPASCLYLAMDENSIFDNGLYDEKPLTFFNPLFSGASCVGRMDRLGYPRWTRGQNREGEE 480
           PPASCLYLAMDENSIFDNGLYDEKPLTFFNPLFSGASCVGRMDRLGYPRWTRGQNREGEE
Sbjct: 421 PPASCLYLAMDENSIFDNGLYDEKPLTFFNPLFSGASCVGRMDRLGYPRWTRGQNREGEE 480

Query: 481 FIRNVFHLVMPLFSGKEKSQLCFSWLQYEIAKVIWCLHTKNKKRLKSQGKNCKKLAKNLL 540
           FIRNVFHLVMPLFSGKEKSQLCFSWLQYEIAKVIWCLHTKNKKRLKSQGKNCKKLAKNLL
Sbjct: 481 FIRNVFHLVMPLFSGKEKSQLCFSWLQYEIAKVIWCLHTKNKKRLKSQGKNCKKLAKNLL 540

Query: 541 KEPENCNNFCLWKQYAHLEWLLGNTEDARKVFDTALGMAGSRELKDSDLCELSLLYAELE 600
           KEPENCNNFCLWKQYAHLEWLLGNTEDARKVFDTALGMAGSRELKDSDLCELSLLYAELE
Sbjct: 541 KEPENCNNFCLWKQYAHLEWLLGNTEDARKVFDTALGMAGSRELKDSDLCELSLLYAELE 600

Query: 601 VELSPEVRRAATARAVHILTKLTESSPYGPYTGQVLAVHILKARKAYEHALQDCLGDSCV 660
           VELSPEVRRAATARAVHILTKLTESSPYGPYTGQVLAVHILKARKAYEHALQDCLGDSCV
Sbjct: 601 VELSPEVRRAATARAVHILTKLTESSPYGPYTGQVLAVHILKARKAYEHALQDCLGDSCV 660

Query: 661 SNPAPTDSCSRLISLAKCFMLFQYLTIGIDAAVQIYEQVFAKLNSSVFPEGSGEGDSASS 720
           SNPAPTDSCSRLISLAKCFMLFQYLTIGIDAAVQIYEQVFAKLNSSVFPEGSGEGDSASS
Sbjct: 661 SNPAPTDSCSRLISLAKCFMLFQYLTIGIDAAVQIYEQVFAKLNSSVFPEGSGEGDSASS 720

Query: 721 QSWTSVLEAITLMHTSLLRFHMKVSVYPLAPLREALSQALKLYPGNQVLWRSYVQIQNKS 780
           QSWTSVLEAITLMHTSLLRFHMKVSVYPLAPLREALSQALKLYPGNQVLWRSYVQIQNKS
Sbjct: 721 QSWTSVLEAITLMHTSLLRFHMKVSVYPLAPLREALSQALKLYPGNQVLWRSYVQIQNKS 780

Query: 781 HSASKTRRFFDTITRSAKPLEPWLFAIEAEKLRKRLVETVQRLDGREIHATIPETGLMHR 840
           HSASKTRRFFDTITRSAKPLEPWLFAIEAEKLRKRLVETVQRLDGREIHATIPETGLMHR
Sbjct: 781 HSASKTRRFFDTITRSAKPLEPWLFAIEAEKLRKRLVETVQRLDGREIHATIPETGLMHR 840

Query: 841 IQALFENAMRSDSGSQCPLLWRMYLNFLVSLGNKERSKGVFYKALQNCPWAKVLYLDAVE 900
           IQALFENAMRSDSGSQCPLLWRMYLNFLVSLGNKERSKGVFYKALQNCPWAKVLYLDAVE
Sbjct: 841 IQALFENAMRSDSGSQCPLLWRMYLNFLVSLGNKERSKGVFYKALQNCPWAKVLYLDAVE 900

Query: 901 YFPDEMQEILDLMTEKELRVRLPLEELELLLED 933
           YFPDEMQEILDLMTEKELRVRLPLEELELLLED
Sbjct: 901 YFPDEMQEILDLMTEKELRVRLPLEELELLLED 933


>gi|39932583 hypothetical protein LOC55051 isoform 1 [Homo sapiens]
          Length = 1164

 Score = 1900 bits (4923), Expect = 0.0
 Identities = 933/933 (100%), Positives = 933/933 (100%)

Query: 1    MNIDGVAISSKTEPPSSEPISFIPVKDLEDAAPVTTWLNPLGIYDQSTTHWLQGQGPPEQ 60
            MNIDGVAISSKTEPPSSEPISFIPVKDLEDAAPVTTWLNPLGIYDQSTTHWLQGQGPPEQ
Sbjct: 232  MNIDGVAISSKTEPPSSEPISFIPVKDLEDAAPVTTWLNPLGIYDQSTTHWLQGQGPPEQ 291

Query: 61   ESKQPDAQPDSESAALKAKVEEFNRRVRENPRDTQLWMAFVAFQDEVMKSPGLYAIEEGE 120
            ESKQPDAQPDSESAALKAKVEEFNRRVRENPRDTQLWMAFVAFQDEVMKSPGLYAIEEGE
Sbjct: 292  ESKQPDAQPDSESAALKAKVEEFNRRVRENPRDTQLWMAFVAFQDEVMKSPGLYAIEEGE 351

Query: 121  QEKRKRSLKLILEKKLAILERAIESNQSSVDLKLAKLKLCTEFWEPSTLVKEWQKLIFLH 180
            QEKRKRSLKLILEKKLAILERAIESNQSSVDLKLAKLKLCTEFWEPSTLVKEWQKLIFLH
Sbjct: 352  QEKRKRSLKLILEKKLAILERAIESNQSSVDLKLAKLKLCTEFWEPSTLVKEWQKLIFLH 411

Query: 181  PNNTALWQKYLLFCQSQFSTFSISKIHSLYGKCLSTLSAVKDGSILSHPALPGTEEAMFA 240
            PNNTALWQKYLLFCQSQFSTFSISKIHSLYGKCLSTLSAVKDGSILSHPALPGTEEAMFA
Sbjct: 412  PNNTALWQKYLLFCQSQFSTFSISKIHSLYGKCLSTLSAVKDGSILSHPALPGTEEAMFA 471

Query: 241  LFLQQCHFLRQAGHSEKAISLFQAMVDFTFFKPDSVKDLPTKGQVEFFEPFWDSGEPRAG 300
            LFLQQCHFLRQAGHSEKAISLFQAMVDFTFFKPDSVKDLPTKGQVEFFEPFWDSGEPRAG
Sbjct: 472  LFLQQCHFLRQAGHSEKAISLFQAMVDFTFFKPDSVKDLPTKGQVEFFEPFWDSGEPRAG 531

Query: 301  EKGARGWKAWMHQQERGGWVVINPDEDDDEPEEDDQEIKDKTLPRWQIWLAAERSRDQRH 360
            EKGARGWKAWMHQQERGGWVVINPDEDDDEPEEDDQEIKDKTLPRWQIWLAAERSRDQRH
Sbjct: 532  EKGARGWKAWMHQQERGGWVVINPDEDDDEPEEDDQEIKDKTLPRWQIWLAAERSRDQRH 591

Query: 361  WRPWRPDKTKKQTEEDCEDPERQVLFDDIGQSLIRLSSHDLQFQLVEAFLQFLGVPSGFT 420
            WRPWRPDKTKKQTEEDCEDPERQVLFDDIGQSLIRLSSHDLQFQLVEAFLQFLGVPSGFT
Sbjct: 592  WRPWRPDKTKKQTEEDCEDPERQVLFDDIGQSLIRLSSHDLQFQLVEAFLQFLGVPSGFT 651

Query: 421  PPASCLYLAMDENSIFDNGLYDEKPLTFFNPLFSGASCVGRMDRLGYPRWTRGQNREGEE 480
            PPASCLYLAMDENSIFDNGLYDEKPLTFFNPLFSGASCVGRMDRLGYPRWTRGQNREGEE
Sbjct: 652  PPASCLYLAMDENSIFDNGLYDEKPLTFFNPLFSGASCVGRMDRLGYPRWTRGQNREGEE 711

Query: 481  FIRNVFHLVMPLFSGKEKSQLCFSWLQYEIAKVIWCLHTKNKKRLKSQGKNCKKLAKNLL 540
            FIRNVFHLVMPLFSGKEKSQLCFSWLQYEIAKVIWCLHTKNKKRLKSQGKNCKKLAKNLL
Sbjct: 712  FIRNVFHLVMPLFSGKEKSQLCFSWLQYEIAKVIWCLHTKNKKRLKSQGKNCKKLAKNLL 771

Query: 541  KEPENCNNFCLWKQYAHLEWLLGNTEDARKVFDTALGMAGSRELKDSDLCELSLLYAELE 600
            KEPENCNNFCLWKQYAHLEWLLGNTEDARKVFDTALGMAGSRELKDSDLCELSLLYAELE
Sbjct: 772  KEPENCNNFCLWKQYAHLEWLLGNTEDARKVFDTALGMAGSRELKDSDLCELSLLYAELE 831

Query: 601  VELSPEVRRAATARAVHILTKLTESSPYGPYTGQVLAVHILKARKAYEHALQDCLGDSCV 660
            VELSPEVRRAATARAVHILTKLTESSPYGPYTGQVLAVHILKARKAYEHALQDCLGDSCV
Sbjct: 832  VELSPEVRRAATARAVHILTKLTESSPYGPYTGQVLAVHILKARKAYEHALQDCLGDSCV 891

Query: 661  SNPAPTDSCSRLISLAKCFMLFQYLTIGIDAAVQIYEQVFAKLNSSVFPEGSGEGDSASS 720
            SNPAPTDSCSRLISLAKCFMLFQYLTIGIDAAVQIYEQVFAKLNSSVFPEGSGEGDSASS
Sbjct: 892  SNPAPTDSCSRLISLAKCFMLFQYLTIGIDAAVQIYEQVFAKLNSSVFPEGSGEGDSASS 951

Query: 721  QSWTSVLEAITLMHTSLLRFHMKVSVYPLAPLREALSQALKLYPGNQVLWRSYVQIQNKS 780
            QSWTSVLEAITLMHTSLLRFHMKVSVYPLAPLREALSQALKLYPGNQVLWRSYVQIQNKS
Sbjct: 952  QSWTSVLEAITLMHTSLLRFHMKVSVYPLAPLREALSQALKLYPGNQVLWRSYVQIQNKS 1011

Query: 781  HSASKTRRFFDTITRSAKPLEPWLFAIEAEKLRKRLVETVQRLDGREIHATIPETGLMHR 840
            HSASKTRRFFDTITRSAKPLEPWLFAIEAEKLRKRLVETVQRLDGREIHATIPETGLMHR
Sbjct: 1012 HSASKTRRFFDTITRSAKPLEPWLFAIEAEKLRKRLVETVQRLDGREIHATIPETGLMHR 1071

Query: 841  IQALFENAMRSDSGSQCPLLWRMYLNFLVSLGNKERSKGVFYKALQNCPWAKVLYLDAVE 900
            IQALFENAMRSDSGSQCPLLWRMYLNFLVSLGNKERSKGVFYKALQNCPWAKVLYLDAVE
Sbjct: 1072 IQALFENAMRSDSGSQCPLLWRMYLNFLVSLGNKERSKGVFYKALQNCPWAKVLYLDAVE 1131

Query: 901  YFPDEMQEILDLMTEKELRVRLPLEELELLLED 933
            YFPDEMQEILDLMTEKELRVRLPLEELELLLED
Sbjct: 1132 YFPDEMQEILDLMTEKELRVRLPLEELELLLED 1164


>gi|124256489 crooked neck-like 1 protein [Homo sapiens]
          Length = 848

 Score = 37.7 bits (86), Expect = 0.050
 Identities = 73/422 (17%), Positives = 154/422 (36%), Gaps = 79/422 (18%)

Query: 505 WLQYEIAKVIWCLHTKNKKRLKSQGKNCKKLAKNLLKEPENCNNFCLWKQYAHLEWLLGN 564
           W++++  +  W  +   + R K   +      + +L  P+  N    W +YA  E     
Sbjct: 336 WMEWQPEEQAWHSYINFELRYKEVDRARTIYERFVLVHPDVKN----WIKYARFEEKHAY 391

Query: 565 TEDARKVFDTALGMAGSRELKDSDLCELSLLYAELEVELSPEVR-RAATARAVHILTKLT 623
              ARKV++ A+   G   + +     L + +A+ E       R R     A+  ++K  
Sbjct: 392 FAHARKVYERAVEFFGDEHMDE----HLYVAFAKFEENQKEFERVRVIYKYALDRISKQD 447

Query: 624 ESSPYGPYT---------GQVLAVHILKARKAYEHALQDCLGDSCVSNPAPTDSCSRLIS 674
               +  YT           +  + + K R  YE  ++        +NP   D+    + 
Sbjct: 448 AQELFKNYTIFEKKFGDRRGIEDIIVSKRRFQYEEEVK--------ANPHNYDAWFDYLR 499

Query: 675 LAKCFMLFQYLTIGIDAAVQIYEQVFAK-----------------LNSSVFPEGSGEGDS 717
           L +            +A  ++YE+  A                  +N +++ E   +   
Sbjct: 500 LVES-------DAEAEAVREVYERAIANVPPIQEKRHWKRYIYLWINYALYEELEAKDPE 552

Query: 718 ASSQSWTSVLEAI-----TLMHTSLLRFHMKVSVYPLAPLREALSQALKLYPGNQVLWRS 772
            + Q + + LE I     T     +L    ++    L+  R AL  ++   P N+ L++ 
Sbjct: 553 RTRQVYQASLELIPHKKFTFAKMWILYAQFEIRQKNLSLARRALGTSIGKCPKNK-LFKV 611

Query: 773 YVQIQNKSHSASKTRRFFDTITR-SAKPLEPWLFAIEAEKLRKRLVETVQRLDGREIHAT 831
           Y++++ +     + R+ ++       +    W+   E E +                   
Sbjct: 612 YIELELQLREFDRCRKLYEKFLEFGPENCTSWIKFAELETI------------------- 652

Query: 832 IPETGLMHRIQALFENAMRSDSGSQCPLLWRMYLNFLVSLGNKERSKGVFYKALQNCPWA 891
               G + R +A++E A+         +LW+ Y++F +     ER++ ++ + LQ     
Sbjct: 653 ---LGDIDRARAIYELAISQPRLDMPEVLWKSYIDFEIEQEETERTRNLYRRLLQRTQHV 709

Query: 892 KV 893
           KV
Sbjct: 710 KV 711


>gi|19718769 engulfment and cell motility 2 [Homo sapiens]
          Length = 720

 Score = 35.8 bits (81), Expect = 0.19
 Identities = 29/88 (32%), Positives = 41/88 (46%), Gaps = 11/88 (12%)

Query: 516 CLHTKNKKRLKSQGKNCKKLAKNLLKEPENCNNFCLWKQYAHLEWLLGNTEDARKVFDTA 575
           C H K K  LK Q K   +LA ++L +P+   NF    +Y +  W+ G            
Sbjct: 615 CPHMKEKSALK-QNKEVLELAFSILYDPDETLNFIAPNKYEYCIWIDG--------LSAL 665

Query: 576 LGMAGSRELKDSDLCELSLLYAELEVEL 603
           LG   S EL  SDL   +LL  E+++ L
Sbjct: 666 LGKDMSSELTKSDLD--TLLSMEMKLRL 691


>gi|33469947 engulfment and cell motility 2 [Homo sapiens]
          Length = 720

 Score = 35.8 bits (81), Expect = 0.19
 Identities = 29/88 (32%), Positives = 41/88 (46%), Gaps = 11/88 (12%)

Query: 516 CLHTKNKKRLKSQGKNCKKLAKNLLKEPENCNNFCLWKQYAHLEWLLGNTEDARKVFDTA 575
           C H K K  LK Q K   +LA ++L +P+   NF    +Y +  W+ G            
Sbjct: 615 CPHMKEKSALK-QNKEVLELAFSILYDPDETLNFIAPNKYEYCIWIDG--------LSAL 665

Query: 576 LGMAGSRELKDSDLCELSLLYAELEVEL 603
           LG   S EL  SDL   +LL  E+++ L
Sbjct: 666 LGKDMSSELTKSDLD--TLLSMEMKLRL 691


>gi|239744307 PREDICTED: similar to hCG1991922 [Homo sapiens]
          Length = 486

 Score = 33.5 bits (75), Expect = 0.95
 Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 1/42 (2%)

Query: 325 DEDDDEPEEDDQEIKDKTLPRWQIWLAAERSRDQRHWRPWRP 366
           DED+DE +++D+E  D     WQ++LA     DQR   P  P
Sbjct: 338 DEDEDEEDDEDEEDGDDEQSHWQLFLAC-CPEDQRRLVPQCP 378


>gi|70980549 programmed cell death 11 [Homo sapiens]
          Length = 1871

 Score = 33.1 bits (74), Expect = 1.2
 Identities = 38/154 (24%), Positives = 64/154 (41%), Gaps = 30/154 (19%)

Query: 59   EQESKQPDAQPDSESAALKAKVEEFNRRVRENPRDTQLWMAFVAFQDEVMKSPGLYAIEE 118
            E+    P  QP+S         ++F+R V  +P  + LW+ ++AF  +  +     A+ E
Sbjct: 1592 EEALMDPGRQPES--------ADDFDRLVLSSPNSSILWLQYMAFHLQATEIEKARAVAE 1643

Query: 119  ---------GEQEKRKRSLKLI--------LEKKLAILERAIESNQS-SVDLKLAKLKLC 160
                      EQEK    + L+         E    + ERA++ N+   V L LA +   
Sbjct: 1644 RALKTISFREEQEKLNVWVALLNLENMYGSQESLTKVFERAVQYNEPLKVFLHLADIYAK 1703

Query: 161  TE-FWEPSTLVKEWQKLIFLHPNNTALWQKYLLF 193
            +E F E   L   + +++       A+W KY  F
Sbjct: 1704 SEKFQEAGEL---YNRMLKRFRQEKAVWIKYGAF 1734


>gi|7661952 squamous cell carcinoma antigen recognized by T cells 3
           [Homo sapiens]
          Length = 963

 Score = 32.7 bits (73), Expect = 1.6
 Identities = 28/83 (33%), Positives = 41/83 (49%), Gaps = 7/83 (8%)

Query: 840 RIQALFENAMRSDSGSQCPLLWRMYLNFLV-SLGNKERSKGVFYKALQNCPWAKVL---Y 895
           RIQ +FE A+  +     P LW  Y  +L   L  K+    V  +A++NCPW   L   Y
Sbjct: 328 RIQLIFERALVENC--LVPDLWIRYSQYLDRQLKVKDLVLSVHNRAIRNCPWTVALWSRY 385

Query: 896 LDAVEYFPDEMQEILDLMTEKEL 918
           L A+E    + Q ++ +  EK L
Sbjct: 386 LLAMERHGVDHQ-VISVTFEKAL 407


>gi|212275945 male-specific lethal 3-like 1 isoform a [Homo sapiens]
          Length = 521

 Score = 32.7 bits (73), Expect = 1.6
 Identities = 21/95 (22%), Positives = 46/95 (48%), Gaps = 7/95 (7%)

Query: 326 EDDDEPEEDDQEIKDKTLPRWQIWLAAERSRDQRHWRPWRPDKTKKQTEEDCEDPERQVL 385
           E+ DE   ++ +I++KT  + +  L   R  ++R      P+  KKQ E+DC    R+  
Sbjct: 137 ENKDEEISEESDIEEKTEVKEEPELQTRREMEERTITIEIPEVLKKQLEDDCYYINRR-- 194

Query: 386 FDDIGQSLIRLSSHDLQFQLVEAFLQFLGVPSGFT 420
                + L++L        ++E++++   + + F+
Sbjct: 195 -----KRLVKLPCQTNIITILESYVKHFAINAAFS 224


>gi|17975759 male-specific lethal 3-like 1 isoform b [Homo sapiens]
          Length = 462

 Score = 32.7 bits (73), Expect = 1.6
 Identities = 21/95 (22%), Positives = 46/95 (48%), Gaps = 7/95 (7%)

Query: 326 EDDDEPEEDDQEIKDKTLPRWQIWLAAERSRDQRHWRPWRPDKTKKQTEEDCEDPERQVL 385
           E+ DE   ++ +I++KT  + +  L   R  ++R      P+  KKQ E+DC    R+  
Sbjct: 78  ENKDEEISEESDIEEKTEVKEEPELQTRREMEERTITIEIPEVLKKQLEDDCYYINRR-- 135

Query: 386 FDDIGQSLIRLSSHDLQFQLVEAFLQFLGVPSGFT 420
                + L++L        ++E++++   + + F+
Sbjct: 136 -----KRLVKLPCQTNIITILESYVKHFAINAAFS 165


>gi|17975755 male-specific lethal 3-like 1 isoform d [Homo sapiens]
          Length = 416

 Score = 32.7 bits (73), Expect = 1.6
 Identities = 21/95 (22%), Positives = 46/95 (48%), Gaps = 7/95 (7%)

Query: 326 EDDDEPEEDDQEIKDKTLPRWQIWLAAERSRDQRHWRPWRPDKTKKQTEEDCEDPERQVL 385
           E+ DE   ++ +I++KT  + +  L   R  ++R      P+  KKQ E+DC    R+  
Sbjct: 137 ENKDEEISEESDIEEKTEVKEEPELQTRREMEERTITIEIPEVLKKQLEDDCYYINRR-- 194

Query: 386 FDDIGQSLIRLSSHDLQFQLVEAFLQFLGVPSGFT 420
                + L++L        ++E++++   + + F+
Sbjct: 195 -----KRLVKLPCQTNIITILESYVKHFAINAAFS 224


>gi|51243065 zinc finger CCHC-type and RNA binding motif 1 [Homo
           sapiens]
          Length = 217

 Score = 32.3 bits (72), Expect = 2.1
 Identities = 16/67 (23%), Positives = 32/67 (47%), Gaps = 2/67 (2%)

Query: 324 PDEDDDEPEEDDQEIKDKTLPRWQIWLAAERSRDQRHWRPWRPDKTKKQTEEDCEDP--E 381
           P+E+ +E EE + E +D  L      +A ++++ +   + W+P      T +D   P  +
Sbjct: 145 PEEEIEEVEESEDEGEDPALDSLSQAIAFQQAKIEEEQKKWKPSSGVPSTSDDSRRPRIK 204

Query: 382 RQVLFDD 388
           +   F D
Sbjct: 205 KSTYFSD 211


>gi|22758136 MAP7 domain containing 2 [Homo sapiens]
          Length = 732

 Score = 32.3 bits (72), Expect = 2.1
 Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 2/77 (2%)

Query: 59  EQESKQPDAQPDSESAALKAKVEEFNRRVRENPRDTQLWMAFVAFQDEVMKSPGLYAIEE 118
           EQE  + + Q   E   LK K EE   R+ E  R  +        ++E  K  G    + 
Sbjct: 419 EQERVEKEEQDRLEREELKRKAEEERLRLEEEARKQEEERK--RQEEEKKKQEGEEKRKA 476

Query: 119 GEQEKRKRSLKLILEKK 135
           GE+ KRK   +L+L++K
Sbjct: 477 GEEAKRKAEEELLLKEK 493


>gi|239749996 PREDICTED: similar to hCG1991922 [Homo sapiens]
          Length = 487

 Score = 32.0 bits (71), Expect = 2.8
 Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 1/42 (2%)

Query: 325 DEDDDEPEEDDQEIKDKTLPRWQIWLAAERSRDQRHWRPWRP 366
           +ED+DE +++D+E  D     WQ++LA     DQR   P  P
Sbjct: 339 EEDEDEEDDEDEEDGDDEQSHWQLFLAC-CPEDQRRLVPQCP 379


>gi|169172639 PREDICTED: similar to U5 snRNP-associated 102 kDa
           protein [Homo sapiens]
          Length = 406

 Score = 32.0 bits (71), Expect = 2.8
 Identities = 34/152 (22%), Positives = 58/152 (38%), Gaps = 30/152 (19%)

Query: 753 REALSQALKLYPGNQVLWRSYVQIQNKSHSASKTRRFFDTITRSAKPLEP-WLFAIEAEK 811
           ++   +AL+ Y     LW    QI+ +     K R  ++   +      P WL       
Sbjct: 160 QDLCEEALRHYEDFPKLWMMKGQIEEQKEMMEKAREAYNQGLKKCPHSTPLWL------- 212

Query: 812 LRKRLVETVQRLDGREIHATIPETGLMHRIQALFENAMRSDSGSQCPLLWRMYLNFLVSL 871
           L  RL E +               G + R +A+ E +   +  +  P LW   +      
Sbjct: 213 LLSRLEEKI---------------GQLTRARAILEKSRLKNPKN--PGLWLESVRLEYRA 255

Query: 872 GNKERSKGVFYKALQNCP-----WAKVLYLDA 898
           G K  +  +  KALQ CP     W++ ++L+A
Sbjct: 256 GLKNIANTLMAKALQECPNSGILWSEAIFLEA 287


>gi|40807485 PRP6 pre-mRNA processing factor 6 homolog [Homo
           sapiens]
          Length = 941

 Score = 32.0 bits (71), Expect = 2.8
 Identities = 34/152 (22%), Positives = 58/152 (38%), Gaps = 30/152 (19%)

Query: 753 REALSQALKLYPGNQVLWRSYVQIQNKSHSASKTRRFFDTITRSAKPLEP-WLFAIEAEK 811
           ++   +AL+ Y     LW    QI+ +     K R  ++   +      P WL       
Sbjct: 695 QDLCEEALRHYEDFPKLWMMKGQIEEQKEMMEKAREAYNQGLKKCPHSTPLWL------- 747

Query: 812 LRKRLVETVQRLDGREIHATIPETGLMHRIQALFENAMRSDSGSQCPLLWRMYLNFLVSL 871
           L  RL E +               G + R +A+ E +   +  +  P LW   +      
Sbjct: 748 LLSRLEEKI---------------GQLTRARAILEKSRLKNPKN--PGLWLESVRLEYRA 790

Query: 872 GNKERSKGVFYKALQNCP-----WAKVLYLDA 898
           G K  +  +  KALQ CP     W++ ++L+A
Sbjct: 791 GLKNIANTLMAKALQECPNSGILWSEAIFLEA 822


>gi|38348298 ankyrin repeat domain 45 [Homo sapiens]
          Length = 266

 Score = 32.0 bits (71), Expect = 2.8
 Identities = 27/108 (25%), Positives = 50/108 (46%), Gaps = 13/108 (12%)

Query: 52  LQGQGPPEQESKQPDAQPDSESAALKAKVEEFNRRVRENPRDTQLWMAFVAFQDEVMKSP 111
           ++ +GPPE ES +  +Q + E+     + EE        P++  L  A     + + K  
Sbjct: 1   MESEGPPESESSEFFSQQEEEN-----EEEEAQEPEETGPKNPLLQPALTGDVEGLQK-- 53

Query: 112 GLYAIEEGEQEKRKRSLKLILEKKLA---ILERAIESNQSSVDLKLAK 156
                E+ E    +++++L+LE+ +    +L  A  + QS V   LAK
Sbjct: 54  ---IFEDPENPHHEQAMQLLLEEDIVGRNLLYAACMAGQSDVIRALAK 98


>gi|239752551 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 238

 Score = 31.6 bits (70), Expect = 3.6
 Identities = 22/90 (24%), Positives = 41/90 (45%), Gaps = 13/90 (14%)

Query: 289 EPFWDSGEPRAGEKGARGWKAW--MHQQERGGWVVINPDEDDDEPEEDDQEIKDKTLPRW 346
           E  W+  E +  E+  + W+    M +QE   W      E  ++  E D+ +++K     
Sbjct: 40  EKMWEQ-EEKMQEQEEKMWEQEEKMWEQEEKMWEQQRLPEQKEKMWEQDERLREKE---- 94

Query: 347 QIWLAAERSRDQRHWRPWRPDKTKKQTEED 376
                 ER R+Q+ W+     + KK+T+E+
Sbjct: 95  ------ERMREQKMWQQVEKMREKKKTQEE 118


>gi|115648142 centrosomal protein 164kDa [Homo sapiens]
          Length = 1460

 Score = 31.6 bits (70), Expect = 3.6
 Identities = 14/64 (21%), Positives = 33/64 (51%)

Query: 322 INPDEDDDEPEEDDQEIKDKTLPRWQIWLAAERSRDQRHWRPWRPDKTKKQTEEDCEDPE 381
           ++P+    EP    +++ +  L   +  +A    +DQRH    + +K ++  E+ C++ E
Sbjct: 571 VSPEVRSTEPVAPPEQLSEAALKAMEEAVAQVLEQDQRHLLESKQEKMQQLREKLCQEEE 630

Query: 382 RQVL 385
            ++L
Sbjct: 631 EEIL 634


>gi|4504867 ring finger protein 8 isoform 1 [Homo sapiens]
          Length = 485

 Score = 31.2 bits (69), Expect = 4.7
 Identities = 34/158 (21%), Positives = 66/158 (41%), Gaps = 19/158 (12%)

Query: 59  EQESKQPDAQPDSESAALKAKVEEFNRRVRENPRDTQLWMAFVAFQDEVMKSPGLYAIEE 118
           EQE +   +Q  +E A  +A+VE+  +                 FQ+E     GL  I +
Sbjct: 289 EQELQDLQSQLCAEQAQQQARVEQLEK----------------TFQEEEQHLQGL-EIAQ 331

Query: 119 GEQEKRKRSLKLILEKKLAILERAIESNQSSVDLKLAKLKLCTEFWEPSTLVKEWQKLIF 178
           GE++  K+ L   L++  A++E    S +    +  AK K   +  E    ++  ++ + 
Sbjct: 332 GEKD-LKQQLAQALQEHWALMEELNRSKKDFEAIIQAKNKELEQTKEEKEKMQAQKEEVL 390

Query: 179 LHPNNTALWQKYLLFCQSQF-STFSISKIHSLYGKCLS 215
            H N+    +   + C   F    +++  HS    C++
Sbjct: 391 SHMNDVLENELQCIICSEYFIEAVTLNCAHSFCSYCIN 428


>gi|47132591 protein kinase N1 isoform 1 [Homo sapiens]
          Length = 948

 Score = 31.2 bits (69), Expect = 4.7
 Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 2/68 (2%)

Query: 323 NPDEDDDEPEEDDQEIKDKTLPRWQIWLAAERSRDQRHWRPWRPDKTKKQTEEDCEDPER 382
           +P   DDE E  D  + D+   R+  +L+AE     R      P++    +E D ED ++
Sbjct: 819 SPFPGDDEEEVFDSIVNDEV--RYPRFLSAEAIGIMRRLLRRNPERRLGSSERDAEDVKK 876

Query: 383 QVLFDDIG 390
           Q  F  +G
Sbjct: 877 QPFFRTLG 884


>gi|47132589 protein kinase N1 isoform 2 [Homo sapiens]
          Length = 942

 Score = 31.2 bits (69), Expect = 4.7
 Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 2/68 (2%)

Query: 323 NPDEDDDEPEEDDQEIKDKTLPRWQIWLAAERSRDQRHWRPWRPDKTKKQTEEDCEDPER 382
           +P   DDE E  D  + D+   R+  +L+AE     R      P++    +E D ED ++
Sbjct: 813 SPFPGDDEEEVFDSIVNDEV--RYPRFLSAEAIGIMRRLLRRNPERRLGSSERDAEDVKK 870

Query: 383 QVLFDDIG 390
           Q  F  +G
Sbjct: 871 QPFFRTLG 878


>gi|222418637 golgi autoantigen, golgin subfamily a-like [Homo
           sapiens]
          Length = 750

 Score = 30.8 bits (68), Expect = 6.1
 Identities = 19/72 (26%), Positives = 37/72 (51%), Gaps = 4/72 (5%)

Query: 311 MHQQERGGWVVINPDEDDDEPEEDDQEIKDKTLPRWQIWLAAERSRDQRHWRPWRPDKTK 370
           MH+QE+  W      E +D+    +++I+++     ++W   E+ R+Q   R  + +K  
Sbjct: 553 MHEQEKI-WEEEKRQEQEDKMWRQEEKIREQ---EEKVWRQEEKIREQEEKRQEQEEKMW 608

Query: 371 KQTEEDCEDPER 382
           KQ E+  E  E+
Sbjct: 609 KQEEKIREQEEK 620


>gi|90819233 myeloid/lymphoid or mixed-lineage leukemia (trithorax
            homolog, Drosophila); translocated to, 4 isoform 2 [Homo
            sapiens]
          Length = 1651

 Score = 30.8 bits (68), Expect = 6.1
 Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 4/52 (7%)

Query: 325  DEDDDEPEEDDQEIKDKTLPRWQIWLAAERSRDQRHWRPWRPDKTKKQTEED 376
            DEDD+E E+DD +    T+   Q   A  R+RD+   R  + ++ +K+  ED
Sbjct: 1577 DEDDEEEEDDDVD----TMLIMQRLEAERRARDEERRRQQQLEEMRKREAED 1624


>gi|17865632 mitochondrial tumor suppressor 1 isoform 5 [Homo
           sapiens]
          Length = 436

 Score = 30.8 bits (68), Expect = 6.1
 Identities = 28/110 (25%), Positives = 50/110 (45%), Gaps = 9/110 (8%)

Query: 116 IEEGEQEKRKRSLKLILEKKLAILERAIESNQSSVDLKLAKLKLCTEFWEPSTLVKEWQK 175
           ++  EQ++R R    +   ++  LE+ +ES ++ +++K  KL       +    + + +K
Sbjct: 279 LKSEEQKRRAREKANLKNPQIMYLEQELESLKAVLEIKNEKLH------QQDIKLMKMEK 332

Query: 176 LIFLHPNNTALWQKYLLFCQSQFSTFSISKIHSLYGKCLSTLSAVKDGSI 225
           L+    NNTAL  K   F Q      +    H    + LST  AV   S+
Sbjct: 333 LV---DNNTALVDKLKRFQQENEELKARMDKHMAISRQLSTEQAVLQESL 379


>gi|50348611 mitochondrial tumor suppressor 1 isoform 1 [Homo sapiens]
          Length = 1270

 Score = 30.8 bits (68), Expect = 6.1
 Identities = 28/110 (25%), Positives = 50/110 (45%), Gaps = 9/110 (8%)

Query: 116  IEEGEQEKRKRSLKLILEKKLAILERAIESNQSSVDLKLAKLKLCTEFWEPSTLVKEWQK 175
            ++  EQ++R R    +   ++  LE+ +ES ++ +++K  KL       +    + + +K
Sbjct: 1113 LKSEEQKRRAREKANLKNPQIMYLEQELESLKAVLEIKNEKLH------QQDIKLMKMEK 1166

Query: 176  LIFLHPNNTALWQKYLLFCQSQFSTFSISKIHSLYGKCLSTLSAVKDGSI 225
            L+    NNTAL  K   F Q      +    H    + LST  AV   S+
Sbjct: 1167 LV---DNNTALVDKLKRFQQENEELKARMDKHMAISRQLSTEQAVLQESL 1213


>gi|50348617 mitochondrial tumor suppressor 1 isoform 2 [Homo sapiens]
          Length = 1216

 Score = 30.8 bits (68), Expect = 6.1
 Identities = 28/110 (25%), Positives = 50/110 (45%), Gaps = 9/110 (8%)

Query: 116  IEEGEQEKRKRSLKLILEKKLAILERAIESNQSSVDLKLAKLKLCTEFWEPSTLVKEWQK 175
            ++  EQ++R R    +   ++  LE+ +ES ++ +++K  KL       +    + + +K
Sbjct: 1059 LKSEEQKRRAREKANLKNPQIMYLEQELESLKAVLEIKNEKLH------QQDIKLMKMEK 1112

Query: 176  LIFLHPNNTALWQKYLLFCQSQFSTFSISKIHSLYGKCLSTLSAVKDGSI 225
            L+    NNTAL  K   F Q      +    H    + LST  AV   S+
Sbjct: 1113 LV---DNNTALVDKLKRFQQENEELKARMDKHMAISRQLSTEQAVLQESL 1159


>gi|50348626 mitochondrial tumor suppressor 1 isoform 4 [Homo
           sapiens]
          Length = 517

 Score = 30.8 bits (68), Expect = 6.1
 Identities = 28/110 (25%), Positives = 50/110 (45%), Gaps = 9/110 (8%)

Query: 116 IEEGEQEKRKRSLKLILEKKLAILERAIESNQSSVDLKLAKLKLCTEFWEPSTLVKEWQK 175
           ++  EQ++R R    +   ++  LE+ +ES ++ +++K  KL       +    + + +K
Sbjct: 360 LKSEEQKRRAREKANLKNPQIMYLEQELESLKAVLEIKNEKLH------QQDIKLMKMEK 413

Query: 176 LIFLHPNNTALWQKYLLFCQSQFSTFSISKIHSLYGKCLSTLSAVKDGSI 225
           L+    NNTAL  K   F Q      +    H    + LST  AV   S+
Sbjct: 414 LV---DNNTALVDKLKRFQQENEELKARMDKHMAISRQLSTEQAVLQESL 460


>gi|45331217 zinc finger protein 526 [Homo sapiens]
          Length = 670

 Score = 30.8 bits (68), Expect = 6.1
 Identities = 13/31 (41%), Positives = 23/31 (74%), Gaps = 2/31 (6%)

Query: 311 MHQQERGGWVVINPDEDDDEPEEDDQEIKDK 341
           + ++ER G  +   +EDD+E EEDD+E++D+
Sbjct: 223 LEKEERNG--LEEEEEDDEEDEEDDEEMEDE 251


>gi|148839346 seizure related 6 homolog isoform 2 [Homo sapiens]
          Length = 993

 Score = 30.8 bits (68), Expect = 6.1
 Identities = 20/74 (27%), Positives = 30/74 (40%), Gaps = 2/74 (2%)

Query: 226 LSHPALPGTEEAMFALFLQQCHFLRQAGHSEKAISLFQ--AMVDFTFFKPDSVKDLPTKG 283
           L  PA PGT    +  +L  CHF R+  + +  ++         F       +K      
Sbjct: 337 LPPPAGPGTFHFHYQAYLLSCHFPRRPAYGDVTVTSLHPGGSARFHCATGYQLKGARHLT 396

Query: 284 QVEFFEPFWDSGEP 297
            +   +PFWDS EP
Sbjct: 397 CLNATQPFWDSKEP 410


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.134    0.409 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,538,750
Number of Sequences: 37866
Number of extensions: 1745702
Number of successful extensions: 6530
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 6430
Number of HSP's gapped (non-prelim): 95
length of query: 933
length of database: 18,247,518
effective HSP length: 112
effective length of query: 821
effective length of database: 14,006,526
effective search space: 11499357846
effective search space used: 11499357846
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 67 (30.4 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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