Guide to the Human Genome
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Name: DZIP1 Sequence: fasta or formatted (867aa) NCBI GI: 39725957
Description:

DAZ interacting protein 1 isoform 2

Referenced in:

Stem Cells and Early Development

Other entries for this name:
alt prot [848aa] DAZ interacting protein 1 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.6         57           5
 C cysteine            1.4         12           1
 D aspartate           4.7         41           3
 E glutamate          11.3         98           3
 F phenylalanine       3.7         32           2
 G glycine             3.6         31           2
 H histidine           3.1         27           2
 I isoleucine          4.5         39           2
 K lysine              9.5         82           2
 L leucine             8.9         77           2
 M methionine          2.8         24           1
 N asparagine          4.2         36           3
 P proline             5.5         48           3
 Q glutamine           6.1         53           2
 R arginine            4.2         36           2
 S serine              8.5         74           2
 T threonine           4.5         39           2
 V valine              4.8         42           2
 W tryptophan          0.9          8           1
 Y tyrosine            1.3         11           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   DAZ interacting protein 1 isoform 2 
DZIP1                 0.969   DAZ interacting protein 1 isoform 1 
DZIP1L                0.179   DAZ interacting protein 1-like 
GOLGB1                0.021   golgi autoantigen, golgin subfamily b, macrogolgin ...
CEP290                0.020   centrosomal protein 290kDa 
MTUS1                 0.020   mitochondrial tumor suppressor 1 isoform 5 
MTUS1                 0.020   mitochondrial tumor suppressor 1 isoform 1 
MTUS1                 0.020   mitochondrial tumor suppressor 1 isoform 2 
MTUS1                 0.020   mitochondrial tumor suppressor 1 isoform 4 
MYH10                 0.020   myosin, heavy polypeptide 10, non-muscle 
CLIP1                 0.019   restin isoform b 
CLIP1                 0.019   restin isoform a 
FAM184A               0.019   hypothetical protein LOC79632 isoform 2 
DSP                   0.019   desmoplakin isoform I 
CEP250                0.019   centrosomal protein 2 
GOLGA4                0.019   golgi autoantigen, golgin subfamily a, 4 
CEP110                0.019   centrosomal protein 110kDa 
MYH7                  0.019   myosin, heavy chain 7, cardiac muscle, beta 
MYH13                 0.019   myosin, heavy polypeptide 13, skeletal muscle [Homo...
LOC283767             0.018   golgi autoantigen, golgin subfamily a-like 
GOLGA3                0.018   Golgi autoantigen, golgin subfamily a, 3 
FAM184A               0.018   hypothetical protein LOC79632 isoform 1 
MYH8                  0.018   myosin, heavy chain 8, skeletal muscle, perinatal [...
MYH9                  0.018   myosin, heavy polypeptide 9, non-muscle 
CCDC46                0.018   coiled-coil domain containing 46 isoform a 
CENPE                 0.017   centromere protein E 
MYH4                  0.017   myosin, heavy polypeptide 4, skeletal muscle 
LOC100132816          0.017   PREDICTED: similar to Putative golgin subfamily A m...
CCDC73                0.017   sarcoma antigen NY-SAR-79 
MYH11                 0.016   smooth muscle myosin heavy chain 11 isoform SM1A [Ho...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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