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Search of human proteins with 39725950
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|39725950 Ran binding protein 11 isoform 2 [Homo sapiens]
(975 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|198041777 Ran binding protein 11 isoform 1 [Homo sapiens] 1950 0.0
gi|39725950 Ran binding protein 11 isoform 2 [Homo sapiens] 1950 0.0
gi|21361659 importin 9 [Homo sapiens] 72 3e-12
gi|29029559 CSE1 chromosome segregation 1-like protein [Homo sap... 67 8e-11
gi|5453998 importin 7 [Homo sapiens] 57 1e-07
gi|53759103 importin 8 [Homo sapiens] 49 2e-05
gi|209969838 transportin 2 (importin 3, karyopherin beta 2b) iso... 47 7e-05
gi|209969836 transportin 2 (importin 3, karyopherin beta 2b) iso... 47 7e-05
gi|48675813 transportin 2 (importin 3, karyopherin beta 2b) isof... 47 7e-05
gi|23510381 transportin 1 isoform 2 [Homo sapiens] 46 1e-04
gi|133925811 transportin 1 isoform 1 [Homo sapiens] 46 1e-04
gi|87299628 biorientation of chromosomes in cell division 1-like... 36 0.15
gi|157388971 hypothetical protein LOC55007 [Homo sapiens] 35 0.34
gi|157388973 hypothetical protein LOC55007 [Homo sapiens] 35 0.34
gi|62198237 DNA-directed DNA polymerase epsilon [Homo sapiens] 34 0.58
gi|55741661 hypothetical protein LOC57653 [Homo sapiens] 33 1.7
gi|190014625 DIS3 mitotic control isoform b [Homo sapiens] 33 1.7
gi|190014623 DIS3 mitotic control isoform a [Homo sapiens] 33 1.7
gi|194306660 coiled-coil domain containing 77 isoform b [Homo sa... 32 2.2
gi|194306658 coiled-coil domain containing 77 isoform b [Homo sa... 32 2.2
gi|14150165 coiled-coil domain containing 77 isoform a [Homo sap... 32 2.2
gi|194306535 coiled-coil domain containing 77 isoform b [Homo sa... 32 2.2
gi|229577396 zinc finger protein 583 [Homo sapiens] 32 3.8
gi|229577249 zinc finger protein 583 [Homo sapiens] 32 3.8
gi|229577247 zinc finger protein 583 [Homo sapiens] 32 3.8
gi|37594442 zinc finger protein 140 [Homo sapiens] 32 3.8
gi|194272228 leucine rich repeat containing 48 isoform b [Homo s... 31 4.9
gi|194272226 leucine rich repeat containing 48 isoform b [Homo s... 31 4.9
gi|194272224 leucine rich repeat containing 48 isoform a [Homo s... 31 4.9
gi|194272222 leucine rich repeat containing 48 isoform a [Homo s... 31 4.9
>gi|198041777 Ran binding protein 11 isoform 1 [Homo sapiens]
Length = 1015
Score = 1950 bits (5052), Expect = 0.0
Identities = 975/975 (100%), Positives = 975/975 (100%)
Query: 1 MDLNSASTVVLQVLTQATSQDTAVLKPAEEQLKQWETQPGFYSVLLNIFTNHTLDINVRW 60
MDLNSASTVVLQVLTQATSQDTAVLKPAEEQLKQWETQPGFYSVLLNIFTNHTLDINVRW
Sbjct: 41 MDLNSASTVVLQVLTQATSQDTAVLKPAEEQLKQWETQPGFYSVLLNIFTNHTLDINVRW 100
Query: 61 LAVLYFKHGIDRYWRRVAPHALSEEEKTTLRAGLITNFNEPINQIATQIAVLIAKVARLD 120
LAVLYFKHGIDRYWRRVAPHALSEEEKTTLRAGLITNFNEPINQIATQIAVLIAKVARLD
Sbjct: 101 LAVLYFKHGIDRYWRRVAPHALSEEEKTTLRAGLITNFNEPINQIATQIAVLIAKVARLD 160
Query: 121 CPRQWPELIPTLIESVKVQDDLRQHRALLTFYHVTKTLASKRLAADRKLFYDLASGIYNF 180
CPRQWPELIPTLIESVKVQDDLRQHRALLTFYHVTKTLASKRLAADRKLFYDLASGIYNF
Sbjct: 161 CPRQWPELIPTLIESVKVQDDLRQHRALLTFYHVTKTLASKRLAADRKLFYDLASGIYNF 220
Query: 181 ACSLWNHHTDTFLQEVSSGNEAAILSSLERTLLSLKVLRKLTVNGFVEPHKNMEVMGFLH 240
ACSLWNHHTDTFLQEVSSGNEAAILSSLERTLLSLKVLRKLTVNGFVEPHKNMEVMGFLH
Sbjct: 221 ACSLWNHHTDTFLQEVSSGNEAAILSSLERTLLSLKVLRKLTVNGFVEPHKNMEVMGFLH 280
Query: 241 GIFERLKQFLECSRSIGTDNVCRDRLEKTIILFTKVLLDFLDQHPFSFTPLIQRSLEFSV 300
GIFERLKQFLECSRSIGTDNVCRDRLEKTIILFTKVLLDFLDQHPFSFTPLIQRSLEFSV
Sbjct: 281 GIFERLKQFLECSRSIGTDNVCRDRLEKTIILFTKVLLDFLDQHPFSFTPLIQRSLEFSV 340
Query: 301 SYVFTEVGEGVTFERFIVQCMNLIKMIVKNYAYKPSKNFEDSSPETLEAHKIKMAFFTYP 360
SYVFTEVGEGVTFERFIVQCMNLIKMIVKNYAYKPSKNFEDSSPETLEAHKIKMAFFTYP
Sbjct: 341 SYVFTEVGEGVTFERFIVQCMNLIKMIVKNYAYKPSKNFEDSSPETLEAHKIKMAFFTYP 400
Query: 361 TLTEICRRLVSHYFLLTEEELTMWEEDPEGFTVEETGGDSWKYSLRPCTEVLFIDIFHEY 420
TLTEICRRLVSHYFLLTEEELTMWEEDPEGFTVEETGGDSWKYSLRPCTEVLFIDIFHEY
Sbjct: 401 TLTEICRRLVSHYFLLTEEELTMWEEDPEGFTVEETGGDSWKYSLRPCTEVLFIDIFHEY 460
Query: 421 NQTLTPVLLEMMQTLQGPTNVEDMNALLIKDAVYNAVGLAAYELFDSVDFDQWFKNQLLP 480
NQTLTPVLLEMMQTLQGPTNVEDMNALLIKDAVYNAVGLAAYELFDSVDFDQWFKNQLLP
Sbjct: 461 NQTLTPVLLEMMQTLQGPTNVEDMNALLIKDAVYNAVGLAAYELFDSVDFDQWFKNQLLP 520
Query: 481 ELQVIHNRYKPLRRRVIWLIGQWISVKFKSDLRPMLYEAICNLLQDQDLVVRIETATTLK 540
ELQVIHNRYKPLRRRVIWLIGQWISVKFKSDLRPMLYEAICNLLQDQDLVVRIETATTLK
Sbjct: 521 ELQVIHNRYKPLRRRVIWLIGQWISVKFKSDLRPMLYEAICNLLQDQDLVVRIETATTLK 580
Query: 541 LTVDDFEFRTDQFLPYLETMFTLLFQLLQQVTECDTKMHVLHVLSCVIERVNMQIRPYVG 600
LTVDDFEFRTDQFLPYLETMFTLLFQLLQQVTECDTKMHVLHVLSCVIERVNMQIRPYVG
Sbjct: 581 LTVDDFEFRTDQFLPYLETMFTLLFQLLQQVTECDTKMHVLHVLSCVIERVNMQIRPYVG 640
Query: 601 CLVQYLPLLWKQSEEHNMLRCAILTTLIHLVQGLGADSKNLYPFLLPVIQLSTDVSQPPH 660
CLVQYLPLLWKQSEEHNMLRCAILTTLIHLVQGLGADSKNLYPFLLPVIQLSTDVSQPPH
Sbjct: 641 CLVQYLPLLWKQSEEHNMLRCAILTTLIHLVQGLGADSKNLYPFLLPVIQLSTDVSQPPH 700
Query: 661 VYLLEDGLELWLVTLENSPCITPELLRIFQNMSPLLELSSENLRTCFKIINGYIFLSSTE 720
VYLLEDGLELWLVTLENSPCITPELLRIFQNMSPLLELSSENLRTCFKIINGYIFLSSTE
Sbjct: 701 VYLLEDGLELWLVTLENSPCITPELLRIFQNMSPLLELSSENLRTCFKIINGYIFLSSTE 760
Query: 721 FLQTYAVGLCQSFCELLKEITTEGQVQVLKVVENALKVNPILGPQMFQPILPYVFKGIIE 780
FLQTYAVGLCQSFCELLKEITTEGQVQVLKVVENALKVNPILGPQMFQPILPYVFKGIIE
Sbjct: 761 FLQTYAVGLCQSFCELLKEITTEGQVQVLKVVENALKVNPILGPQMFQPILPYVFKGIIE 820
Query: 781 GERYPVVMSTYLGVMGRVLLQNTSFFSSLLNEMAHKFNQEMDQLLGNMIEMWVDRMDNIT 840
GERYPVVMSTYLGVMGRVLLQNTSFFSSLLNEMAHKFNQEMDQLLGNMIEMWVDRMDNIT
Sbjct: 821 GERYPVVMSTYLGVMGRVLLQNTSFFSSLLNEMAHKFNQEMDQLLGNMIEMWVDRMDNIT 880
Query: 841 QPERRKLSALALLSLLPSDNSVIQDKFCGIINISVEGLHDVMTEDPETGTYKDCMLMSHL 900
QPERRKLSALALLSLLPSDNSVIQDKFCGIINISVEGLHDVMTEDPETGTYKDCMLMSHL
Sbjct: 881 QPERRKLSALALLSLLPSDNSVIQDKFCGIINISVEGLHDVMTEDPETGTYKDCMLMSHL 940
Query: 901 EEPKVTEDEEPPTEQDKRKKMLALKDPVHTVSLQQFIYEKLKAQQEMLGEQGFQSLMETV 960
EEPKVTEDEEPPTEQDKRKKMLALKDPVHTVSLQQFIYEKLKAQQEMLGEQGFQSLMETV
Sbjct: 941 EEPKVTEDEEPPTEQDKRKKMLALKDPVHTVSLQQFIYEKLKAQQEMLGEQGFQSLMETV 1000
Query: 961 DTEIVTQLQEFLQGF 975
DTEIVTQLQEFLQGF
Sbjct: 1001 DTEIVTQLQEFLQGF 1015
>gi|39725950 Ran binding protein 11 isoform 2 [Homo sapiens]
Length = 975
Score = 1950 bits (5052), Expect = 0.0
Identities = 975/975 (100%), Positives = 975/975 (100%)
Query: 1 MDLNSASTVVLQVLTQATSQDTAVLKPAEEQLKQWETQPGFYSVLLNIFTNHTLDINVRW 60
MDLNSASTVVLQVLTQATSQDTAVLKPAEEQLKQWETQPGFYSVLLNIFTNHTLDINVRW
Sbjct: 1 MDLNSASTVVLQVLTQATSQDTAVLKPAEEQLKQWETQPGFYSVLLNIFTNHTLDINVRW 60
Query: 61 LAVLYFKHGIDRYWRRVAPHALSEEEKTTLRAGLITNFNEPINQIATQIAVLIAKVARLD 120
LAVLYFKHGIDRYWRRVAPHALSEEEKTTLRAGLITNFNEPINQIATQIAVLIAKVARLD
Sbjct: 61 LAVLYFKHGIDRYWRRVAPHALSEEEKTTLRAGLITNFNEPINQIATQIAVLIAKVARLD 120
Query: 121 CPRQWPELIPTLIESVKVQDDLRQHRALLTFYHVTKTLASKRLAADRKLFYDLASGIYNF 180
CPRQWPELIPTLIESVKVQDDLRQHRALLTFYHVTKTLASKRLAADRKLFYDLASGIYNF
Sbjct: 121 CPRQWPELIPTLIESVKVQDDLRQHRALLTFYHVTKTLASKRLAADRKLFYDLASGIYNF 180
Query: 181 ACSLWNHHTDTFLQEVSSGNEAAILSSLERTLLSLKVLRKLTVNGFVEPHKNMEVMGFLH 240
ACSLWNHHTDTFLQEVSSGNEAAILSSLERTLLSLKVLRKLTVNGFVEPHKNMEVMGFLH
Sbjct: 181 ACSLWNHHTDTFLQEVSSGNEAAILSSLERTLLSLKVLRKLTVNGFVEPHKNMEVMGFLH 240
Query: 241 GIFERLKQFLECSRSIGTDNVCRDRLEKTIILFTKVLLDFLDQHPFSFTPLIQRSLEFSV 300
GIFERLKQFLECSRSIGTDNVCRDRLEKTIILFTKVLLDFLDQHPFSFTPLIQRSLEFSV
Sbjct: 241 GIFERLKQFLECSRSIGTDNVCRDRLEKTIILFTKVLLDFLDQHPFSFTPLIQRSLEFSV 300
Query: 301 SYVFTEVGEGVTFERFIVQCMNLIKMIVKNYAYKPSKNFEDSSPETLEAHKIKMAFFTYP 360
SYVFTEVGEGVTFERFIVQCMNLIKMIVKNYAYKPSKNFEDSSPETLEAHKIKMAFFTYP
Sbjct: 301 SYVFTEVGEGVTFERFIVQCMNLIKMIVKNYAYKPSKNFEDSSPETLEAHKIKMAFFTYP 360
Query: 361 TLTEICRRLVSHYFLLTEEELTMWEEDPEGFTVEETGGDSWKYSLRPCTEVLFIDIFHEY 420
TLTEICRRLVSHYFLLTEEELTMWEEDPEGFTVEETGGDSWKYSLRPCTEVLFIDIFHEY
Sbjct: 361 TLTEICRRLVSHYFLLTEEELTMWEEDPEGFTVEETGGDSWKYSLRPCTEVLFIDIFHEY 420
Query: 421 NQTLTPVLLEMMQTLQGPTNVEDMNALLIKDAVYNAVGLAAYELFDSVDFDQWFKNQLLP 480
NQTLTPVLLEMMQTLQGPTNVEDMNALLIKDAVYNAVGLAAYELFDSVDFDQWFKNQLLP
Sbjct: 421 NQTLTPVLLEMMQTLQGPTNVEDMNALLIKDAVYNAVGLAAYELFDSVDFDQWFKNQLLP 480
Query: 481 ELQVIHNRYKPLRRRVIWLIGQWISVKFKSDLRPMLYEAICNLLQDQDLVVRIETATTLK 540
ELQVIHNRYKPLRRRVIWLIGQWISVKFKSDLRPMLYEAICNLLQDQDLVVRIETATTLK
Sbjct: 481 ELQVIHNRYKPLRRRVIWLIGQWISVKFKSDLRPMLYEAICNLLQDQDLVVRIETATTLK 540
Query: 541 LTVDDFEFRTDQFLPYLETMFTLLFQLLQQVTECDTKMHVLHVLSCVIERVNMQIRPYVG 600
LTVDDFEFRTDQFLPYLETMFTLLFQLLQQVTECDTKMHVLHVLSCVIERVNMQIRPYVG
Sbjct: 541 LTVDDFEFRTDQFLPYLETMFTLLFQLLQQVTECDTKMHVLHVLSCVIERVNMQIRPYVG 600
Query: 601 CLVQYLPLLWKQSEEHNMLRCAILTTLIHLVQGLGADSKNLYPFLLPVIQLSTDVSQPPH 660
CLVQYLPLLWKQSEEHNMLRCAILTTLIHLVQGLGADSKNLYPFLLPVIQLSTDVSQPPH
Sbjct: 601 CLVQYLPLLWKQSEEHNMLRCAILTTLIHLVQGLGADSKNLYPFLLPVIQLSTDVSQPPH 660
Query: 661 VYLLEDGLELWLVTLENSPCITPELLRIFQNMSPLLELSSENLRTCFKIINGYIFLSSTE 720
VYLLEDGLELWLVTLENSPCITPELLRIFQNMSPLLELSSENLRTCFKIINGYIFLSSTE
Sbjct: 661 VYLLEDGLELWLVTLENSPCITPELLRIFQNMSPLLELSSENLRTCFKIINGYIFLSSTE 720
Query: 721 FLQTYAVGLCQSFCELLKEITTEGQVQVLKVVENALKVNPILGPQMFQPILPYVFKGIIE 780
FLQTYAVGLCQSFCELLKEITTEGQVQVLKVVENALKVNPILGPQMFQPILPYVFKGIIE
Sbjct: 721 FLQTYAVGLCQSFCELLKEITTEGQVQVLKVVENALKVNPILGPQMFQPILPYVFKGIIE 780
Query: 781 GERYPVVMSTYLGVMGRVLLQNTSFFSSLLNEMAHKFNQEMDQLLGNMIEMWVDRMDNIT 840
GERYPVVMSTYLGVMGRVLLQNTSFFSSLLNEMAHKFNQEMDQLLGNMIEMWVDRMDNIT
Sbjct: 781 GERYPVVMSTYLGVMGRVLLQNTSFFSSLLNEMAHKFNQEMDQLLGNMIEMWVDRMDNIT 840
Query: 841 QPERRKLSALALLSLLPSDNSVIQDKFCGIINISVEGLHDVMTEDPETGTYKDCMLMSHL 900
QPERRKLSALALLSLLPSDNSVIQDKFCGIINISVEGLHDVMTEDPETGTYKDCMLMSHL
Sbjct: 841 QPERRKLSALALLSLLPSDNSVIQDKFCGIINISVEGLHDVMTEDPETGTYKDCMLMSHL 900
Query: 901 EEPKVTEDEEPPTEQDKRKKMLALKDPVHTVSLQQFIYEKLKAQQEMLGEQGFQSLMETV 960
EEPKVTEDEEPPTEQDKRKKMLALKDPVHTVSLQQFIYEKLKAQQEMLGEQGFQSLMETV
Sbjct: 901 EEPKVTEDEEPPTEQDKRKKMLALKDPVHTVSLQQFIYEKLKAQQEMLGEQGFQSLMETV 960
Query: 961 DTEIVTQLQEFLQGF 975
DTEIVTQLQEFLQGF
Sbjct: 961 DTEIVTQLQEFLQGF 975
>gi|21361659 importin 9 [Homo sapiens]
Length = 1041
Score = 71.6 bits (174), Expect = 3e-12
Identities = 117/592 (19%), Positives = 217/592 (36%), Gaps = 73/592 (12%)
Query: 10 VLQVLTQATSQDTAVLKPAEEQLKQWETQPGFYSVLLNIFTNHTLDINVRWLAVLYFKHG 69
++ LT S V AEEQ+K E F L + + + +R LA + K
Sbjct: 25 LVDTLTGILSPVQEVRAAAEEQIKVLEVTEEFGVHLAELTVDPQGALAIRQLASVILKQY 84
Query: 70 IDRYW----RRVAPHALSEEEKTTLRAGLITNFNEPINQIATQIAVLIAKVARLDCPRQW 125
++ +W + P +E K +R L E I+++ + +A ++ +A D P W
Sbjct: 85 VETHWCAQSEKFRPPETTERAKIVIRELLPNGLRESISKVRSSVAYAVSAIAHWDWPEAW 144
Query: 126 PELIPTLIESVKVQDDLRQHRALLTFYHVTKTLASKRLAADRKLFYDLASGIYNFACSLW 185
P+L L+E + D H A+ T+ + ++ + I+ A ++
Sbjct: 145 PQLFNLLMEMLVSGDLNAVHGAMRVLTEFTREVTDTQMPLVAPVILPEMYKIFTMA-EVY 203
Query: 186 NHHTDTFLQEVSSGNEAAILSSLERTLLSLKVLRKLTVNGFVEPHKNMEVMGFLHGIFER 245
T + E+ + I + E + KVL V F E
Sbjct: 204 GIRTRSRAVEIFTTCAHMICNMEELEKGAAKVLIFPVVQQFT----------------EA 247
Query: 246 LKQFLECSRSIGTDNVCRDRLEKTIILFTKVLLDFLDQHPFSFTPLIQRSL-EFSVSYVF 304
Q L+ +D+ + + K + K + P++ +L E + YV
Sbjct: 248 FVQALQIPDGPTSDSGFKMEVLKAVTALVKNFPKHMVSSMQQILPIVWNTLTESAAFYVR 307
Query: 305 TEV-------------GEGVTFERFIVQCMNLIKMIVKNYAYKPSKNFEDSSPETLEAHK 351
TEV GE + FE + + +++N +K +
Sbjct: 308 TEVNYTEEVEDPVDSDGEVLGFENLVFSIFEFVHALLENSKFKST--------------- 352
Query: 352 IKMAFFTYPTLTEICRRLVSHYFLLTEEELTMWEEDPEGFTVEETGGDSWKYSLRPCTEV 411
+K A L E+ ++ Y +TEE++ +W +P+ F VE+ D++ Y++R +
Sbjct: 353 VKKA------LPELIYYIIL-YMQITEEQIKVWTANPQQF-VEDEDDDTFSYTVRIAAQD 404
Query: 412 LFI----DIFHEYNQTLTPVLLEMMQTLQGPTNVEDMNALLIKDAVYNAVGLAAYELFDS 467
L + D +E L +Q + N + I +A A+G + DS
Sbjct: 405 LLLAVATDFQNESAAALAAAATRHLQEAEQTKNSGTEHWWKIHEACMLALGSVKAIITDS 464
Query: 468 V-------DFDQWFKNQLLPELQVIHNRYKPLRRRVIWLIGQWISVKFKSDLRPMLYEAI 520
V D + N +L +L + + + L R +W ++ ++ L +
Sbjct: 465 VKNGRIHFDMHGFLTNVILADLNLSVSPF--LLGRALWAASRFTVAMSPELIQQFLQATV 522
Query: 521 CNLLQDQDLVVRIETATTLKLTVDDFEF--RTDQFLPYLETMFTLLFQLLQQ 570
L + Q VRI + D + T P+L ++ L L Q
Sbjct: 523 SGLHETQPPSVRISAVRAIWGYCDQLKVSESTHVLQPFLPSILDGLIHLAAQ 574
Score = 33.9 bits (76), Expect = 0.76
Identities = 61/320 (19%), Positives = 124/320 (38%), Gaps = 27/320 (8%)
Query: 610 WKQSEEHNMLRCAILTTLIHLVQGLGADSKNLYPFLLPVIQLSTDVSQPPHVYLLEDGLE 669
W + E ML + +I G +++ FL VI ++S P +LL G
Sbjct: 443 WWKIHEACMLALGSVKAIITDSVKNGRIHFDMHGFLTNVILADLNLSVSP--FLL--GRA 498
Query: 670 LWLVTLENSPCITPELLRIF--QNMSPLLELSSENLR-TCFKIINGYI----FLSSTEFL 722
LW + + ++PEL++ F +S L E ++R + + I GY ST L
Sbjct: 499 LWAAS-RFTVAMSPELIQQFLQATVSGLHETQPPSVRISAVRAIWGYCDQLKVSESTHVL 557
Query: 723 QTYAVGLCQSFCELLKEITTEGQVQVLKVVENALKVNPILGPQMFQPILPYVFKGIIEGE 782
Q + + L + ++E V++ + V+P M I P+ ++
Sbjct: 558 QPFLPSILDGLIHLAAQFSSEVLNLVMETLCIVCTVDPEFTASMESKICPFTIAIFLKYS 617
Query: 783 RYPVVMSTYLGV---MGRVLLQNTSFFSSLLNEMAHKFNQEMDQLLGNMIEMWVDRMDNI 839
PVV S + + ++ L+ + D++ + +D + +
Sbjct: 618 NDPVVASLAQDIFKELSQIEACQGPMQMRLIPTLVSIMQAPADKIPAGLCATAIDILTTV 677
Query: 840 TQPERRKLSALALLSLLPS---------DNSVIQ---DKFCGIINISVEGLHDVMTEDPE 887
+ + LS L + P+ DN+ +Q + +++++E + E
Sbjct: 678 VRNTKPPLSQLLICQAFPAVAQCTLHTDDNATMQNGGECLRAYVSVTLEQVAQWHDEQGH 737
Query: 888 TGTYKDCMLMSHLEEPKVTE 907
G + ++S L +P+ +E
Sbjct: 738 NGLWYVMQVVSQLLDPRTSE 757
>gi|29029559 CSE1 chromosome segregation 1-like protein [Homo
sapiens]
Length = 971
Score = 67.0 bits (162), Expect = 8e-11
Identities = 165/860 (19%), Positives = 309/860 (35%), Gaps = 117/860 (13%)
Query: 1 MDLNSASTVVL-QVLTQATSQDTAVLKPAEEQLKQWETQPGFYSVLLNIFTNHTLDINVR 59
M+L+ A+ L + L + D A+ +PAE+ L+ E Y +LL + D ++
Sbjct: 1 MELSDANLQTLTEYLKKTLDPDPAIRRPAEKFLESVEGNQN-YPLLLLTLLEKSQDNVIK 59
Query: 60 WLAVLYFKHGIDRYWRRVA--PHALSEEEKTTLRAGLITNFNEPINQIATQIAVLIAKVA 117
A + FK+ I R WR V P+ + E ++ ++A ++ QI Q++ I+ +
Sbjct: 60 VCASVTFKNYIKRNWRIVEDEPNKICEADRVAIKANIVHLMLSSPEQIQKQLSDAISIIG 119
Query: 118 RLDCPRQWPELIPTLIESVKVQDDLRQHRALLTFYHVTK----TLASKRLAADRKLFYDL 173
R D P++WP+L+ ++ + D + L T + + K S L + KL D
Sbjct: 120 REDFPQKWPDLLTEMVNRFQSGDFHVINGVLRTAHSLFKRYRHEFKSNELWTEIKLVLDA 179
Query: 174 ASGIYNFACSLWNHHTDTFLQEVSSGNEAAILSSLERTLLSLKVLRKLTVNGFVEPHKNM 233
FA L N T + N+A+ L L +L+ + L
Sbjct: 180 ------FALPLTNLFKATIELCSTHANDASALRILFSSLILISKL--------------- 218
Query: 234 EVMGFLHGIFERLKQFLECSRSIGTDNVCRDRLEKTIILFTKVLLDFLDQHPFSFTPLIQ 293
F F+ L +F E + +N T++ LL D+ L++
Sbjct: 219 ----FYSLNFQDLPEFFEDNMETWMNNF------HTLLTLDNKLLQTDDEEEAGLLELLK 268
Query: 294 RSLEFSVSYVFTEVGEGVT--FERFIVQCMNLIKMIVKNYAYK-PSKNFEDSSPETLEAH 350
+ + + + E RF+ NL+ + Y N E
Sbjct: 269 SQICDNAALYAQKYDEEFQRYLPRFVTAIWNLLVTTGQEVKYDLLVSNAIQFLASVCERP 328
Query: 351 KIKMAFFTYPTLTEICRRLVSHYFLLTEEELTMWEEDPEGFTVEETGGDSWKYSLRPCTE 410
K F TLT IC +++ + +E++ E + + G R +
Sbjct: 329 HYKNLFEDQNTLTSICEKVIVPNMEFRAADEEAFEDNSEEYIRRDLEGSDIDTRRRAACD 388
Query: 411 VLFIDIFHEYNQTLTPVLLEMMQT-LQGPTNVEDMNALLIKDAVYNAVGLAA-------- 461
L + + +T + + + LQ +N A+Y LA+
Sbjct: 389 -LVRGLCKFFEGPVTGIFSGYVNSMLQEYAKNPSVNWKHKDAAIYLVTSLASKAQTQKHG 447
Query: 462 -YELFDSVDFDQWFKNQLLPELQ------------------------------------- 483
+ + V+ ++F N +LP+L+
Sbjct: 448 ITQANELVNLTEFFVNHILPDLKSANVNEFPVLKADGIKYIMIFRNQVPKEHLLVSIPLL 507
Query: 484 ---------VIHNRYKPLRRRVIWLIGQWISVKFKS-DLRPMLYEAICNLLQDQDLVVRI 533
V+H R+ + G + F + ++ P + + NL + L
Sbjct: 508 INHLQAESIVVHTYAAHALERLFTMRGPNNATLFTAAEIAPFVEILLTNLFKALTLPGSS 567
Query: 534 ETATTLKLTVDDFEFRTDQFLPYLETMFTLLFQLLQQVTECDTKMHVLHVL---SCVIER 590
E +K + F + +PY+ T+ T L Q L V++ +K H H + C+ R
Sbjct: 568 ENEYIMKAIMRSFSLLQEAIIPYIPTLITQLTQKLLAVSKNPSKPHFNHYMFEAICLSIR 627
Query: 591 VNMQIRPYV------GCLVQYLPLLWKQSEEHNMLRCAILTTLIHLVQG-LGADSKNLYP 643
+ + P + + +L +E +++ L+ + + + L+P
Sbjct: 628 ITCKANPAAVVNFEEALFLVFTEILQNDVQEFIPYVFQVMSLLLETHKNDIPSSYMALFP 687
Query: 644 FLLPVIQLSTDVSQPPHVYLLEDGLELWLVTLENSPC-ITPELLRIFQNMSPLLELSSEN 702
LL + + P V LL+ LE T+ ++ P LL +FQ L S N
Sbjct: 688 HLLQPVLWERTGNIPALVRLLQAFLERGSNTIASAAADKIPGLLGVFQK----LIASKAN 743
Query: 703 LRTCFKIINGYIFLSSTEFLQTYAVGLCQSFCELLKEITTEGQVQVLKVVEN--ALKVNP 760
F ++N I E + Y + + L+ T ++ V N +K
Sbjct: 744 DHQGFYLLNSIIEHMPPESVDQYRKQIFILLFQRLQNSKTTKFIKSFLVFINLYCIKYGA 803
Query: 761 ILGPQMFQPILPYVFKGIIE 780
+ ++F I P +F ++E
Sbjct: 804 LALQEIFDGIQPKMFGMVLE 823
>gi|5453998 importin 7 [Homo sapiens]
Length = 1038
Score = 56.6 bits (135), Expect = 1e-07
Identities = 36/151 (23%), Positives = 66/151 (43%), Gaps = 7/151 (4%)
Query: 19 SQDTAVLKPAEEQLKQWETQPGFYSVLLNIFTNHTLDINVRWLAVLYFKHGIDRYW---- 74
+ D A+ + AE QL + F S LL I + LD+ VR V+Y K+ I +YW
Sbjct: 13 TMDPALREAAERQLNEAHKSLNFVSTLLQITMSEQLDLPVRQAGVIYLKNMITQYWPDRE 72
Query: 75 ---RRVAPHALSEEEKTTLRAGLITNFNEPINQIATQIAVLIAKVARLDCPRQWPELIPT 131
++P+ + EE++ +R ++ I Q+ I + + D P +W ++
Sbjct: 73 TAPGDISPYTIPEEDRHCIRENIVEAIIHSPELIRVQLTTCIHHIIKHDYPSRWTAIVDK 132
Query: 132 LIESVKVQDDLRQHRALLTFYHVTKTLASKR 162
+ ++ + LL Y + K K+
Sbjct: 133 IGFYLQSDNSACWLGILLCLYQLVKNYEYKK 163
Score = 48.1 bits (113), Expect = 4e-05
Identities = 55/261 (21%), Positives = 113/261 (43%), Gaps = 22/261 (8%)
Query: 360 PTLTEICRRLVSHYFLLTEEELTMWEEDPEGFTVEETGGDSWKYSLRPCT--EVLFIDIF 417
P + I + ++ T+ + +W+EDP + + D ++ + P T + L
Sbjct: 344 PHIQGIIQDVIFPLMCYTDADEELWQEDPYEYIRMKF--DVFEDFISPTTAAQTLLFTAC 401
Query: 418 HEYNQTLTPVLLEMMQTLQGPTNVEDMNALLIKDAVYNAVG-LAAYELFDSVDFDQW--- 473
+ + L + Q L P N + KD + +G LA L + DQ
Sbjct: 402 SKRKEVLQKTMGFCYQILTEP-NADPRK----KDGALHMIGSLAEILLKKKIYKDQMEYM 456
Query: 474 FKNQLLPELQVIHNRYKPLRRRVIWLIGQWISVKFKSD--LRPMLYEAICNLLQDQDLVV 531
+N + P + + +R R W++ + VKFKSD L+ L L+ D+++ V
Sbjct: 457 LQNHVFP---LFSSELGYMRARACWVLHYFCEVKFKSDQNLQTALELTRRCLIDDREMPV 513
Query: 532 RIETATTLKLTVDDFEFRTDQFLPYLETMFTLLFQLLQQVTECDTKMHVLHVLSCVIERV 591
++E A L++ + + E + P++ + L ++++ TE D +V+ + C
Sbjct: 514 KVEAAIALQVLISNQEKAKEYITPFIRPVMQALLHIIRE-TENDDLTNVIQKMIC---EY 569
Query: 592 NMQIRPYVGCLVQYLPLLWKQ 612
+ ++ P + Q+L + + Q
Sbjct: 570 SEEVTPIAVEMTQHLAMTFNQ 590
>gi|53759103 importin 8 [Homo sapiens]
Length = 1037
Score = 48.9 bits (115), Expect = 2e-05
Identities = 37/170 (21%), Positives = 70/170 (41%), Gaps = 14/170 (8%)
Query: 1 MDLNSASTVVLQVLTQATSQDTAVLKPAEEQLKQWETQPGFYSVLLNIFTNHTLDINVRW 60
MDLN ++Q L D + AE +L Q F LL I + ++ VR
Sbjct: 1 MDLNR----IIQALKGTI--DPKLRIAAENELNQSYKIINFAPSLLRIIVSDHVEFPVRQ 54
Query: 61 LAVLYFKHGIDRYW--------RRVAPHALSEEEKTTLRAGLITNFNEPINQIATQIAVL 112
A +Y K+ + +YW + P + E ++ +R ++ + + Q+ +
Sbjct: 55 AAAIYLKNMVTQYWPDREPPPGEAIFPFNIHENDRQQIRDNIVEGIIRSPDLVRVQLTMC 114
Query: 113 IAKVARLDCPRQWPELIPTLIESVKVQDDLRQHRALLTFYHVTKTLASKR 162
+ + + D P WP ++ + ++ Q +LL Y + KT K+
Sbjct: 115 LRAIIKHDFPGHWPGVVDKIDYYLQSQSSASWLGSLLCLYQLVKTYEYKK 164
Score = 40.8 bits (94), Expect = 0.006
Identities = 50/235 (21%), Positives = 104/235 (44%), Gaps = 19/235 (8%)
Query: 360 PTLTEICRRLVSHYFLLTEEELTMWEEDPEGFTVEETGGDSWKYSLRPCT--EVLFIDIF 417
P + I ++ +E+ +W+EDP + D ++ P T + L
Sbjct: 345 PHIQNISEDVIFSVMCYKDEDEELWQEDP--YEYIRMKFDIFEDYASPTTAAQTLLYTAA 402
Query: 418 HEYNQTLTPVLLEMMQTLQGPTNVEDMNALLIKDAVYNAVG-LAAYELFDSVDFDQ---W 473
+ + L ++ Q L P N + KD + +G LA L S+ DQ +
Sbjct: 403 KKRKEVLPKMMAFCYQILTDP-NFDPRK----KDGALHVIGSLAEILLKKSLFKDQMELF 457
Query: 474 FKNQLLPELQVIHNRYKPLRRRVIWLIGQWISVKFKSD--LRPMLYEAICNLLQDQDLVV 531
+N + P ++ + LR R W++ + S+KF ++ LR + A +L++D+++ V
Sbjct: 458 LQNHVFP---LLLSNLGYLRARSCWVLHAFSSLKFHNELNLRNAVELAKKSLIEDKEMPV 514
Query: 532 RIETATTLKLTVDDFEFRTDQFLPYLETMFTLLFQLLQQVTECDTKMHVLHVLSC 586
++E A L+ + + + P++ + L ++++ TE D +V+ + C
Sbjct: 515 KVEAALALQSLISNQIQAKEYMKPHVRPIMQELLHIVRE-TENDDVTNVIQKMIC 568
>gi|209969838 transportin 2 (importin 3, karyopherin beta 2b)
isoform 1 [Homo sapiens]
Length = 897
Score = 47.4 bits (111), Expect = 7e-05
Identities = 33/132 (25%), Positives = 61/132 (46%), Gaps = 6/132 (4%)
Query: 10 VLQVLTQATSQDTAVLKPAEEQLKQWETQPGFYSVLLNIFTN-HTLDINVRWLAVLYFKH 68
VLQ+L + S +TA + +++LKQ P F + L+ + T + D R L+ L K+
Sbjct: 13 VLQLLKDSQSPNTATQRIVQDKLKQLNQFPDFNNYLIFVLTRLKSEDEPTRSLSGLILKN 72
Query: 69 GIDRYWRRVAPHALSEEEKTTLRAGLITNFNEPINQIATQIAVLIAKVARLDCPRQWPEL 128
+ +++ P ++ + N + + I I +LI +A + WPEL
Sbjct: 73 NVKAHYQSFPPPVAD-----FIKQECLNNIGDASSLIRATIGILITTIASKGELQMWPEL 127
Query: 129 IPTLIESVKVQD 140
+P L + +D
Sbjct: 128 LPQLCNLLNSED 139
>gi|209969836 transportin 2 (importin 3, karyopherin beta 2b)
isoform 3 [Homo sapiens]
Length = 887
Score = 47.4 bits (111), Expect = 7e-05
Identities = 33/132 (25%), Positives = 61/132 (46%), Gaps = 6/132 (4%)
Query: 10 VLQVLTQATSQDTAVLKPAEEQLKQWETQPGFYSVLLNIFTN-HTLDINVRWLAVLYFKH 68
VLQ+L + S +TA + +++LKQ P F + L+ + T + D R L+ L K+
Sbjct: 13 VLQLLKDSQSPNTATQRIVQDKLKQLNQFPDFNNYLIFVLTRLKSEDEPTRSLSGLILKN 72
Query: 69 GIDRYWRRVAPHALSEEEKTTLRAGLITNFNEPINQIATQIAVLIAKVARLDCPRQWPEL 128
+ +++ P ++ + N + + I I +LI +A + WPEL
Sbjct: 73 NVKAHYQSFPPPVAD-----FIKQECLNNIGDASSLIRATIGILITTIASKGELQMWPEL 127
Query: 129 IPTLIESVKVQD 140
+P L + +D
Sbjct: 128 LPQLCNLLNSED 139
>gi|48675813 transportin 2 (importin 3, karyopherin beta 2b) isoform
2 [Homo sapiens]
Length = 887
Score = 47.4 bits (111), Expect = 7e-05
Identities = 33/132 (25%), Positives = 61/132 (46%), Gaps = 6/132 (4%)
Query: 10 VLQVLTQATSQDTAVLKPAEEQLKQWETQPGFYSVLLNIFTN-HTLDINVRWLAVLYFKH 68
VLQ+L + S +TA + +++LKQ P F + L+ + T + D R L+ L K+
Sbjct: 13 VLQLLKDSQSPNTATQRIVQDKLKQLNQFPDFNNYLIFVLTRLKSEDEPTRSLSGLILKN 72
Query: 69 GIDRYWRRVAPHALSEEEKTTLRAGLITNFNEPINQIATQIAVLIAKVARLDCPRQWPEL 128
+ +++ P ++ + N + + I I +LI +A + WPEL
Sbjct: 73 NVKAHYQSFPPPVAD-----FIKQECLNNIGDASSLIRATIGILITTIASKGELQMWPEL 127
Query: 129 IPTLIESVKVQD 140
+P L + +D
Sbjct: 128 LPQLCNLLNSED 139
>gi|23510381 transportin 1 isoform 2 [Homo sapiens]
Length = 890
Score = 46.2 bits (108), Expect = 1e-04
Identities = 29/132 (21%), Positives = 66/132 (50%), Gaps = 6/132 (4%)
Query: 10 VLQVLTQATSQDTAVLKPAEEQLKQWETQPGFYSVLLNIFTN-HTLDINVRWLAVLYFKH 68
+LQ+L ++ S DT + + +++L+Q P F + L+ + T + D R L+ L K+
Sbjct: 15 ILQLLKESQSPDTTIQRTVQQKLEQLNQYPDFNNYLIFVLTKLKSEDEPTRSLSGLILKN 74
Query: 69 GIDRYWRRVAPHALSEEEKTTLRAGLITNFNEPINQIATQIAVLIAKVARLDCPRQWPEL 128
+ +++ P+ +++ +++ + N + I + +LI +A + WP+L
Sbjct: 75 NVKAHFQNF-PNGVTD----FIKSECLNNIGDSSPLIRATVGILITTIASKGELQNWPDL 129
Query: 129 IPTLIESVKVQD 140
+P L + +D
Sbjct: 130 LPKLCSLLDSED 141
>gi|133925811 transportin 1 isoform 1 [Homo sapiens]
Length = 898
Score = 46.2 bits (108), Expect = 1e-04
Identities = 29/132 (21%), Positives = 66/132 (50%), Gaps = 6/132 (4%)
Query: 10 VLQVLTQATSQDTAVLKPAEEQLKQWETQPGFYSVLLNIFTN-HTLDINVRWLAVLYFKH 68
+LQ+L ++ S DT + + +++L+Q P F + L+ + T + D R L+ L K+
Sbjct: 23 ILQLLKESQSPDTTIQRTVQQKLEQLNQYPDFNNYLIFVLTKLKSEDEPTRSLSGLILKN 82
Query: 69 GIDRYWRRVAPHALSEEEKTTLRAGLITNFNEPINQIATQIAVLIAKVARLDCPRQWPEL 128
+ +++ P+ +++ +++ + N + I + +LI +A + WP+L
Sbjct: 83 NVKAHFQNF-PNGVTD----FIKSECLNNIGDSSPLIRATVGILITTIASKGELQNWPDL 137
Query: 129 IPTLIESVKVQD 140
+P L + +D
Sbjct: 138 LPKLCSLLDSED 149
>gi|87299628 biorientation of chromosomes in cell division 1-like
[Homo sapiens]
Length = 3051
Score = 36.2 bits (82), Expect = 0.15
Identities = 27/138 (19%), Positives = 59/138 (42%), Gaps = 8/138 (5%)
Query: 836 MDNITQPERRKLSALALLSLLPSDNSVIQDKFCGIINISVEGLHDVMTEDPETGTYKDCM 895
++++ P + + + D S+I G+ +I+V +H E T ++ +
Sbjct: 369 VESLKLPSEKNSNKAKTVEGTKEDFSLIDSDVDGLTDITVSSVHTSDLSSFEEDTEEEVV 428
Query: 896 LMSHLEEPKVTEDEEPPTEQDKRKKMLA------LKDPVHTVSLQQFIYEKL--KAQQEM 947
+EE ++T D+E +Q+K K + K H + ++Y K + E+
Sbjct: 429 TSDSMEEGEITSDDEEKNKQNKTKTQTSDSSEGKTKSVRHAYVHKPYLYSKYYSDSDDEL 488
Query: 948 LGEQGFQSLMETVDTEIV 965
EQ QS+ + + ++
Sbjct: 489 TVEQRRQSIAKEKEERLL 506
>gi|157388971 hypothetical protein LOC55007 [Homo sapiens]
Length = 357
Score = 35.0 bits (79), Expect = 0.34
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Query: 757 KVNPILG---PQMFQPILPYVFKGIIEGERYPVVMSTYLGVMGRVLLQNTSFFSSLLNEM 813
K++P G P FQ L VF + + R PVV+ + L +M R + T+ + +LL
Sbjct: 97 KMSPRTGDAKPSFFQDCLMEVFDDLEQHIRSPVVLQSILSLMDRGAMVLTTNYDNLLEAF 156
Query: 814 AHKFNQEMDQL 824
+ N+ M+ L
Sbjct: 157 GRRQNKPMESL 167
>gi|157388973 hypothetical protein LOC55007 [Homo sapiens]
Length = 357
Score = 35.0 bits (79), Expect = 0.34
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Query: 757 KVNPILG---PQMFQPILPYVFKGIIEGERYPVVMSTYLGVMGRVLLQNTSFFSSLLNEM 813
K++P G P FQ L VF + + R PVV+ + L +M R + T+ + +LL
Sbjct: 97 KMSPRTGDAKPSFFQDCLMEVFDDLEQHIRSPVVLQSILSLMDRGAMVLTTNYDNLLEAF 156
Query: 814 AHKFNQEMDQL 824
+ N+ M+ L
Sbjct: 157 GRRQNKPMESL 167
>gi|62198237 DNA-directed DNA polymerase epsilon [Homo sapiens]
Length = 2286
Score = 34.3 bits (77), Expect = 0.58
Identities = 17/43 (39%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
Query: 80 HALSEEEKTTLRAGLITNFNEPINQIATQIAVLIAKVARLDCP 122
HAL EEEK + +TNF E ++I +++A L +R++CP
Sbjct: 580 HALEEEEKVPVEQ--VTNFEEVCDEIKSKLASLKDVPSRIECP 620
>gi|55741661 hypothetical protein LOC57653 [Homo sapiens]
Length = 1646
Score = 32.7 bits (73), Expect = 1.7
Identities = 28/132 (21%), Positives = 61/132 (46%), Gaps = 17/132 (12%)
Query: 690 QNMSPLLELSSENLRTCFKIINGYIFLSSTEFLQTYAVGLCQSFCELLKEITTEGQVQVL 749
+ + ++ ++ E L C + NG +F+++ L T+ + F L E+ T VQV
Sbjct: 1471 EELDSMIRMNKEKLEECTRR-NGQVFITN---LATFT----EKFLLQLDEVVTIDDVQVA 1522
Query: 750 KVVENALKVNPILGPQMFQPIL------PYVFKGIIEGERYPVVMSTYLGVMGRVLLQNT 803
++ K++ ++ ++ L P + +G ++P + T + + ++LLQ T
Sbjct: 1523 RMEPPKQKLSMLIRRKLAGLSLKEESEKPLIERG---SRKWPGIKPTEVTIQNKILLQPT 1579
Query: 804 SFFSSLLNEMAH 815
S S+ + H
Sbjct: 1580 SSISTTKTTLGH 1591
>gi|190014625 DIS3 mitotic control isoform b [Homo sapiens]
Length = 928
Score = 32.7 bits (73), Expect = 1.7
Identities = 26/98 (26%), Positives = 43/98 (43%), Gaps = 8/98 (8%)
Query: 514 PMLYEAICNLLQDQDLVVRIETATTLKLTVDDFEFRTDQFLPYLETMFTLLFQ--LLQQV 571
P YE + + ++L ++ +TA +L ++D E T PYL T+ +L ++Q V
Sbjct: 666 PSNYEILVKAARSRNLEIKTDTAKSLAESLDQAESPT---FPYLNTLLRILATRCMMQAV 722
Query: 572 TEC---DTKMHVLHVLSCVIERVNMQIRPYVGCLVQYL 606
C D H + S + IR Y +V L
Sbjct: 723 YFCSGMDNDFHHYGLASPIYTHFTSPIRRYADVIVHRL 760
>gi|190014623 DIS3 mitotic control isoform a [Homo sapiens]
Length = 958
Score = 32.7 bits (73), Expect = 1.7
Identities = 26/98 (26%), Positives = 43/98 (43%), Gaps = 8/98 (8%)
Query: 514 PMLYEAICNLLQDQDLVVRIETATTLKLTVDDFEFRTDQFLPYLETMFTLLFQ--LLQQV 571
P YE + + ++L ++ +TA +L ++D E T PYL T+ +L ++Q V
Sbjct: 696 PSNYEILVKAARSRNLEIKTDTAKSLAESLDQAESPT---FPYLNTLLRILATRCMMQAV 752
Query: 572 TEC---DTKMHVLHVLSCVIERVNMQIRPYVGCLVQYL 606
C D H + S + IR Y +V L
Sbjct: 753 YFCSGMDNDFHHYGLASPIYTHFTSPIRRYADVIVHRL 790
>gi|194306660 coiled-coil domain containing 77 isoform b [Homo
sapiens]
Length = 456
Score = 32.3 bits (72), Expect = 2.2
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 476 NQLLPELQVIHNRYKPL-RRRVIWLIGQWISVKFK----SDLRPMLYEAICNLLQDQDLV 530
N++ LQ++ RY+ L RRR++ + G +K DL MLY+A N +QDL
Sbjct: 361 NKMGKRLQIMTKRYEALERRRILEVEGFKTDIKVLRQKLKDLEQMLYKATVNARANQDLA 420
Query: 531 VRIE 534
+ E
Sbjct: 421 LLCE 424
>gi|194306658 coiled-coil domain containing 77 isoform b [Homo
sapiens]
Length = 456
Score = 32.3 bits (72), Expect = 2.2
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 476 NQLLPELQVIHNRYKPL-RRRVIWLIGQWISVKFK----SDLRPMLYEAICNLLQDQDLV 530
N++ LQ++ RY+ L RRR++ + G +K DL MLY+A N +QDL
Sbjct: 361 NKMGKRLQIMTKRYEALERRRILEVEGFKTDIKVLRQKLKDLEQMLYKATVNARANQDLA 420
Query: 531 VRIE 534
+ E
Sbjct: 421 LLCE 424
>gi|14150165 coiled-coil domain containing 77 isoform a [Homo
sapiens]
Length = 488
Score = 32.3 bits (72), Expect = 2.2
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 476 NQLLPELQVIHNRYKPL-RRRVIWLIGQWISVKFK----SDLRPMLYEAICNLLQDQDLV 530
N++ LQ++ RY+ L RRR++ + G +K DL MLY+A N +QDL
Sbjct: 393 NKMGKRLQIMTKRYEALERRRILEVEGFKTDIKVLRQKLKDLEQMLYKATVNARANQDLA 452
Query: 531 VRIE 534
+ E
Sbjct: 453 LLCE 456
>gi|194306535 coiled-coil domain containing 77 isoform b [Homo
sapiens]
Length = 456
Score = 32.3 bits (72), Expect = 2.2
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 476 NQLLPELQVIHNRYKPL-RRRVIWLIGQWISVKFK----SDLRPMLYEAICNLLQDQDLV 530
N++ LQ++ RY+ L RRR++ + G +K DL MLY+A N +QDL
Sbjct: 361 NKMGKRLQIMTKRYEALERRRILEVEGFKTDIKVLRQKLKDLEQMLYKATVNARANQDLA 420
Query: 531 VRIE 534
+ E
Sbjct: 421 LLCE 424
>gi|229577396 zinc finger protein 583 [Homo sapiens]
Length = 569
Score = 31.6 bits (70), Expect = 3.8
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 5/63 (7%)
Query: 634 LGADSKNLYPFLL-----PVIQLSTDVSQPPHVYLLEDGLELWLVTLENSPCITPELLRI 688
L +NLY ++ ++ L VS+P + LLE G E W+V E + P+ +
Sbjct: 23 LNPAQRNLYRKVMLENYRSLVSLGVSVSKPDVISLLEQGKEPWMVKKEGTRGPCPDWEYV 82
Query: 689 FQN 691
F+N
Sbjct: 83 FKN 85
>gi|229577249 zinc finger protein 583 [Homo sapiens]
Length = 569
Score = 31.6 bits (70), Expect = 3.8
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 5/63 (7%)
Query: 634 LGADSKNLYPFLL-----PVIQLSTDVSQPPHVYLLEDGLELWLVTLENSPCITPELLRI 688
L +NLY ++ ++ L VS+P + LLE G E W+V E + P+ +
Sbjct: 23 LNPAQRNLYRKVMLENYRSLVSLGVSVSKPDVISLLEQGKEPWMVKKEGTRGPCPDWEYV 82
Query: 689 FQN 691
F+N
Sbjct: 83 FKN 85
>gi|229577247 zinc finger protein 583 [Homo sapiens]
Length = 569
Score = 31.6 bits (70), Expect = 3.8
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 5/63 (7%)
Query: 634 LGADSKNLYPFLL-----PVIQLSTDVSQPPHVYLLEDGLELWLVTLENSPCITPELLRI 688
L +NLY ++ ++ L VS+P + LLE G E W+V E + P+ +
Sbjct: 23 LNPAQRNLYRKVMLENYRSLVSLGVSVSKPDVISLLEQGKEPWMVKKEGTRGPCPDWEYV 82
Query: 689 FQN 691
F+N
Sbjct: 83 FKN 85
>gi|37594442 zinc finger protein 140 [Homo sapiens]
Length = 457
Score = 31.6 bits (70), Expect = 3.8
Identities = 23/94 (24%), Positives = 38/94 (40%), Gaps = 22/94 (23%)
Query: 610 WKQSEEHNMLRCAILTTLIHLVQGLGADSKNLYPFLLPVIQLSTDVSQPPHVYLLEDGLE 669
W Q + ++ RC +L HLV L +S+P V LLE G E
Sbjct: 22 WLQPAQRDLYRCVMLENYGHLVS------------------LGLSISKPDVVSLLEQGKE 63
Query: 670 LWLVTLENSPCITPELLRIFQNMSPLLELSSENL 703
WL E + +L + ++ + + S +N+
Sbjct: 64 PWLGKRE----VKRDLFSVSESSGEIKDFSPKNV 93
>gi|194272228 leucine rich repeat containing 48 isoform b [Homo
sapiens]
Length = 457
Score = 31.2 bits (69), Expect = 4.9
Identities = 30/127 (23%), Positives = 59/127 (46%), Gaps = 10/127 (7%)
Query: 853 LSLLPSDNSVIQ---DKFCGI-INISVEGLHDVMTEDPETGTYKDCMLMSHLEEPKVTED 908
LS LP +++ DKF I +NI GL E T+ +C+ + E + +
Sbjct: 263 LSYLPGVGELLETYKDKFVIICVNIFEYGLKQQEKRKTELDTFSECVREAIQENQEQGKR 322
Query: 909 EEPPTEQDKRKKMLALKDPVHTVSLQQFIYEKLKAQQEMLGEQGFQSLMETVDTEIVTQL 968
+ E+ + A+++ + ++++ I E E+ F +LM T++ ++V QL
Sbjct: 323 KIAKFEEKHLSSLSAIREELELPNIEKMILECSADISEL-----FDALM-TLEMQLVEQL 376
Query: 969 QEFLQGF 975
+E + F
Sbjct: 377 EETINMF 383
>gi|194272226 leucine rich repeat containing 48 isoform b [Homo
sapiens]
Length = 457
Score = 31.2 bits (69), Expect = 4.9
Identities = 30/127 (23%), Positives = 59/127 (46%), Gaps = 10/127 (7%)
Query: 853 LSLLPSDNSVIQ---DKFCGI-INISVEGLHDVMTEDPETGTYKDCMLMSHLEEPKVTED 908
LS LP +++ DKF I +NI GL E T+ +C+ + E + +
Sbjct: 263 LSYLPGVGELLETYKDKFVIICVNIFEYGLKQQEKRKTELDTFSECVREAIQENQEQGKR 322
Query: 909 EEPPTEQDKRKKMLALKDPVHTVSLQQFIYEKLKAQQEMLGEQGFQSLMETVDTEIVTQL 968
+ E+ + A+++ + ++++ I E E+ F +LM T++ ++V QL
Sbjct: 323 KIAKFEEKHLSSLSAIREELELPNIEKMILECSADISEL-----FDALM-TLEMQLVEQL 376
Query: 969 QEFLQGF 975
+E + F
Sbjct: 377 EETINMF 383
>gi|194272224 leucine rich repeat containing 48 isoform a [Homo
sapiens]
Length = 523
Score = 31.2 bits (69), Expect = 4.9
Identities = 30/127 (23%), Positives = 59/127 (46%), Gaps = 10/127 (7%)
Query: 853 LSLLPSDNSVIQ---DKFCGI-INISVEGLHDVMTEDPETGTYKDCMLMSHLEEPKVTED 908
LS LP +++ DKF I +NI GL E T+ +C+ + E + +
Sbjct: 263 LSYLPGVGELLETYKDKFVIICVNIFEYGLKQQEKRKTELDTFSECVREAIQENQEQGKR 322
Query: 909 EEPPTEQDKRKKMLALKDPVHTVSLQQFIYEKLKAQQEMLGEQGFQSLMETVDTEIVTQL 968
+ E+ + A+++ + ++++ I E E+ F +LM T++ ++V QL
Sbjct: 323 KIAKFEEKHLSSLSAIREELELPNIEKMILECSADISEL-----FDALM-TLEMQLVEQL 376
Query: 969 QEFLQGF 975
+E + F
Sbjct: 377 EETINMF 383
>gi|194272222 leucine rich repeat containing 48 isoform a [Homo
sapiens]
Length = 523
Score = 31.2 bits (69), Expect = 4.9
Identities = 30/127 (23%), Positives = 59/127 (46%), Gaps = 10/127 (7%)
Query: 853 LSLLPSDNSVIQ---DKFCGI-INISVEGLHDVMTEDPETGTYKDCMLMSHLEEPKVTED 908
LS LP +++ DKF I +NI GL E T+ +C+ + E + +
Sbjct: 263 LSYLPGVGELLETYKDKFVIICVNIFEYGLKQQEKRKTELDTFSECVREAIQENQEQGKR 322
Query: 909 EEPPTEQDKRKKMLALKDPVHTVSLQQFIYEKLKAQQEMLGEQGFQSLMETVDTEIVTQL 968
+ E+ + A+++ + ++++ I E E+ F +LM T++ ++V QL
Sbjct: 323 KIAKFEEKHLSSLSAIREELELPNIEKMILECSADISEL-----FDALM-TLEMQLVEQL 376
Query: 969 QEFLQGF 975
+E + F
Sbjct: 377 EETINMF 383
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.137 0.406
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,600,378
Number of Sequences: 37866
Number of extensions: 1488356
Number of successful extensions: 3676
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 3628
Number of HSP's gapped (non-prelim): 51
length of query: 975
length of database: 18,247,518
effective HSP length: 112
effective length of query: 863
effective length of database: 14,006,526
effective search space: 12087631938
effective search space used: 12087631938
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.