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Search of human proteins with 39573718
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|39573718 hypothetical protein LOC374393 isoform a [Homo
sapiens]
(734 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|39573718 hypothetical protein LOC374393 isoform a [Homo sapiens] 1519 0.0
gi|218156275 hypothetical protein LOC374393 isoform b [Homo sapi... 1461 0.0
gi|218156273 hypothetical protein LOC374393 isoform b [Homo sapi... 1461 0.0
gi|215983098 hypothetical protein LOC63901 [Homo sapiens] 261 2e-69
gi|215983096 hypothetical protein LOC63901 [Homo sapiens] 261 2e-69
gi|215983094 hypothetical protein LOC63901 [Homo sapiens] 261 2e-69
gi|38505211 hypothetical protein LOC63901 [Homo sapiens] 261 2e-69
gi|38505209 hypothetical protein LOC63901 [Homo sapiens] 261 2e-69
gi|117935038 cylicin, basic protein of sperm head cytoskeleton 1... 40 0.006
gi|196114999 special AT-rich sequence binding protein 1 [Homo sa... 39 0.017
gi|4506791 special AT-rich sequence binding protein 1 [Homo sapi... 39 0.017
gi|102467235 inner centromere protein antigens 135/155kDa isofor... 38 0.029
gi|102467242 inner centromere protein antigens 135/155kDa isofor... 38 0.029
gi|23097308 spectrin repeat containing, nuclear envelope 1 isofo... 37 0.066
gi|154277116 spectrin repeat containing, nuclear envelope 1 isof... 37 0.066
gi|71043500 beta 1,4-N-acetylgalactosaminyltransferase-transfera... 36 0.15
gi|188219599 N-myc and STAT interactor [Homo sapiens] 36 0.15
gi|148746195 trichohyalin [Homo sapiens] 35 0.33
gi|71061468 centromere protein E [Homo sapiens] 35 0.33
gi|109240556 RUN and FYVE domain-containing 2 isoform a [Homo sa... 35 0.33
gi|33620716 retinoblastoma-binding protein 6 isoform 2 [Homo sap... 34 0.42
gi|33620769 retinoblastoma-binding protein 6 isoform 1 [Homo sap... 34 0.42
gi|8922950 meiosis-specific nuclear structural 1 [Homo sapiens] 34 0.42
gi|19924131 RAD50 homolog isoform 2 [Homo sapiens] 33 0.72
gi|19924129 RAD50 homolog isoform 1 [Homo sapiens] 33 0.72
gi|219803769 trichoplein [Homo sapiens] 33 0.95
gi|14150056 trichoplein [Homo sapiens] 33 0.95
gi|116014339 olfactomedin-like 2A [Homo sapiens] 33 0.95
gi|110624781 myosin, heavy polypeptide 13, skeletal muscle [Homo... 33 1.2
gi|110815815 centlein isoform 1 [Homo sapiens] 33 1.2
>gi|39573718 hypothetical protein LOC374393 isoform a [Homo sapiens]
Length = 734
Score = 1519 bits (3933), Expect = 0.0
Identities = 734/734 (100%), Positives = 734/734 (100%)
Query: 1 MNSMKTEENKSFSAMEDDQRTRPEVSKDTVMKQTHADTPVDHCLSGIRKCSSTFKLKSEV 60
MNSMKTEENKSFSAMEDDQRTRPEVSKDTVMKQTHADTPVDHCLSGIRKCSSTFKLKSEV
Sbjct: 1 MNSMKTEENKSFSAMEDDQRTRPEVSKDTVMKQTHADTPVDHCLSGIRKCSSTFKLKSEV 60
Query: 61 NKHETALEMQNPNLNNKECCFTFTLNGNSRKLDRSVFTAYGKPSESIYSALSANDYFSER 120
NKHETALEMQNPNLNNKECCFTFTLNGNSRKLDRSVFTAYGKPSESIYSALSANDYFSER
Sbjct: 61 NKHETALEMQNPNLNNKECCFTFTLNGNSRKLDRSVFTAYGKPSESIYSALSANDYFSER 120
Query: 121 IKNQFNKNIIVYEEKTIDGHINLGMPLKCLPSDSHFKITFGQRKSSKEDGHILRQCENPN 180
IKNQFNKNIIVYEEKTIDGHINLGMPLKCLPSDSHFKITFGQRKSSKEDGHILRQCENPN
Sbjct: 121 IKNQFNKNIIVYEEKTIDGHINLGMPLKCLPSDSHFKITFGQRKSSKEDGHILRQCENPN 180
Query: 181 MECILFHVVAIGRTRKKIVKINELHEKGSKLCIYALKGETIEGALCKDGRFRSDIGEFEW 240
MECILFHVVAIGRTRKKIVKINELHEKGSKLCIYALKGETIEGALCKDGRFRSDIGEFEW
Sbjct: 181 MECILFHVVAIGRTRKKIVKINELHEKGSKLCIYALKGETIEGALCKDGRFRSDIGEFEW 240
Query: 241 KLKEGHKKIYGKQSMVDEVSGKVLEMDISKKKALQQKDIHKKIKQNESATDEINHQSLIQ 300
KLKEGHKKIYGKQSMVDEVSGKVLEMDISKKKALQQKDIHKKIKQNESATDEINHQSLIQ
Sbjct: 241 KLKEGHKKIYGKQSMVDEVSGKVLEMDISKKKALQQKDIHKKIKQNESATDEINHQSLIQ 300
Query: 301 SKKKVHKPKKDGETKDVEHSREQILPPQDLSHYIKDKTRQTIPRIRNYYFCSLPRKYRQI 360
SKKKVHKPKKDGETKDVEHSREQILPPQDLSHYIKDKTRQTIPRIRNYYFCSLPRKYRQI
Sbjct: 301 SKKKVHKPKKDGETKDVEHSREQILPPQDLSHYIKDKTRQTIPRIRNYYFCSLPRKYRQI 360
Query: 361 NSQVRRRPHLGRRYAINLDVQKEAINLLKNYQTLNEAIMHQYPNFKEEAQWVRKYFREEQ 420
NSQVRRRPHLGRRYAINLDVQKEAINLLKNYQTLNEAIMHQYPNFKEEAQWVRKYFREEQ
Sbjct: 361 NSQVRRRPHLGRRYAINLDVQKEAINLLKNYQTLNEAIMHQYPNFKEEAQWVRKYFREEQ 420
Query: 421 KRMNLSPAKQFNIYKKDFGKMTANSVSVATCEQLTYYSKSVGFMQWDNNGNTGNATCFVF 480
KRMNLSPAKQFNIYKKDFGKMTANSVSVATCEQLTYYSKSVGFMQWDNNGNTGNATCFVF
Sbjct: 421 KRMNLSPAKQFNIYKKDFGKMTANSVSVATCEQLTYYSKSVGFMQWDNNGNTGNATCFVF 480
Query: 481 NGGYIFTCRHVVHLMVGKNTHPSLWPDIISKCAKVTFTYTEFCPTPDNWFSIEPWLKVSN 540
NGGYIFTCRHVVHLMVGKNTHPSLWPDIISKCAKVTFTYTEFCPTPDNWFSIEPWLKVSN
Sbjct: 481 NGGYIFTCRHVVHLMVGKNTHPSLWPDIISKCAKVTFTYTEFCPTPDNWFSIEPWLKVSN 540
Query: 541 ENLDYAILKLKENGNAFPPGLWRQISPQPSTGLIYLIGHPEGQIKKIDGCTVIPLNERLK 600
ENLDYAILKLKENGNAFPPGLWRQISPQPSTGLIYLIGHPEGQIKKIDGCTVIPLNERLK
Sbjct: 541 ENLDYAILKLKENGNAFPPGLWRQISPQPSTGLIYLIGHPEGQIKKIDGCTVIPLNERLK 600
Query: 601 KYPNDCQDGLVDLYDTTSNVYCMFTQRSFLSEVWNTHTLSYDTCFSDGSSGSPVFNASGK 660
KYPNDCQDGLVDLYDTTSNVYCMFTQRSFLSEVWNTHTLSYDTCFSDGSSGSPVFNASGK
Sbjct: 601 KYPNDCQDGLVDLYDTTSNVYCMFTQRSFLSEVWNTHTLSYDTCFSDGSSGSPVFNASGK 660
Query: 661 LVALHTFGLFYQRGFNVHALIEFGYSMDSILCDIKKTNESLYKSLNDEKLETYDEEKGKQ 720
LVALHTFGLFYQRGFNVHALIEFGYSMDSILCDIKKTNESLYKSLNDEKLETYDEEKGKQ
Sbjct: 661 LVALHTFGLFYQRGFNVHALIEFGYSMDSILCDIKKTNESLYKSLNDEKLETYDEEKGKQ 720
Query: 721 ESSLQDHQIEPMEC 734
ESSLQDHQIEPMEC
Sbjct: 721 ESSLQDHQIEPMEC 734
>gi|218156275 hypothetical protein LOC374393 isoform b [Homo
sapiens]
Length = 704
Score = 1461 bits (3782), Expect = 0.0
Identities = 704/704 (100%), Positives = 704/704 (100%)
Query: 31 MKQTHADTPVDHCLSGIRKCSSTFKLKSEVNKHETALEMQNPNLNNKECCFTFTLNGNSR 90
MKQTHADTPVDHCLSGIRKCSSTFKLKSEVNKHETALEMQNPNLNNKECCFTFTLNGNSR
Sbjct: 1 MKQTHADTPVDHCLSGIRKCSSTFKLKSEVNKHETALEMQNPNLNNKECCFTFTLNGNSR 60
Query: 91 KLDRSVFTAYGKPSESIYSALSANDYFSERIKNQFNKNIIVYEEKTIDGHINLGMPLKCL 150
KLDRSVFTAYGKPSESIYSALSANDYFSERIKNQFNKNIIVYEEKTIDGHINLGMPLKCL
Sbjct: 61 KLDRSVFTAYGKPSESIYSALSANDYFSERIKNQFNKNIIVYEEKTIDGHINLGMPLKCL 120
Query: 151 PSDSHFKITFGQRKSSKEDGHILRQCENPNMECILFHVVAIGRTRKKIVKINELHEKGSK 210
PSDSHFKITFGQRKSSKEDGHILRQCENPNMECILFHVVAIGRTRKKIVKINELHEKGSK
Sbjct: 121 PSDSHFKITFGQRKSSKEDGHILRQCENPNMECILFHVVAIGRTRKKIVKINELHEKGSK 180
Query: 211 LCIYALKGETIEGALCKDGRFRSDIGEFEWKLKEGHKKIYGKQSMVDEVSGKVLEMDISK 270
LCIYALKGETIEGALCKDGRFRSDIGEFEWKLKEGHKKIYGKQSMVDEVSGKVLEMDISK
Sbjct: 181 LCIYALKGETIEGALCKDGRFRSDIGEFEWKLKEGHKKIYGKQSMVDEVSGKVLEMDISK 240
Query: 271 KKALQQKDIHKKIKQNESATDEINHQSLIQSKKKVHKPKKDGETKDVEHSREQILPPQDL 330
KKALQQKDIHKKIKQNESATDEINHQSLIQSKKKVHKPKKDGETKDVEHSREQILPPQDL
Sbjct: 241 KKALQQKDIHKKIKQNESATDEINHQSLIQSKKKVHKPKKDGETKDVEHSREQILPPQDL 300
Query: 331 SHYIKDKTRQTIPRIRNYYFCSLPRKYRQINSQVRRRPHLGRRYAINLDVQKEAINLLKN 390
SHYIKDKTRQTIPRIRNYYFCSLPRKYRQINSQVRRRPHLGRRYAINLDVQKEAINLLKN
Sbjct: 301 SHYIKDKTRQTIPRIRNYYFCSLPRKYRQINSQVRRRPHLGRRYAINLDVQKEAINLLKN 360
Query: 391 YQTLNEAIMHQYPNFKEEAQWVRKYFREEQKRMNLSPAKQFNIYKKDFGKMTANSVSVAT 450
YQTLNEAIMHQYPNFKEEAQWVRKYFREEQKRMNLSPAKQFNIYKKDFGKMTANSVSVAT
Sbjct: 361 YQTLNEAIMHQYPNFKEEAQWVRKYFREEQKRMNLSPAKQFNIYKKDFGKMTANSVSVAT 420
Query: 451 CEQLTYYSKSVGFMQWDNNGNTGNATCFVFNGGYIFTCRHVVHLMVGKNTHPSLWPDIIS 510
CEQLTYYSKSVGFMQWDNNGNTGNATCFVFNGGYIFTCRHVVHLMVGKNTHPSLWPDIIS
Sbjct: 421 CEQLTYYSKSVGFMQWDNNGNTGNATCFVFNGGYIFTCRHVVHLMVGKNTHPSLWPDIIS 480
Query: 511 KCAKVTFTYTEFCPTPDNWFSIEPWLKVSNENLDYAILKLKENGNAFPPGLWRQISPQPS 570
KCAKVTFTYTEFCPTPDNWFSIEPWLKVSNENLDYAILKLKENGNAFPPGLWRQISPQPS
Sbjct: 481 KCAKVTFTYTEFCPTPDNWFSIEPWLKVSNENLDYAILKLKENGNAFPPGLWRQISPQPS 540
Query: 571 TGLIYLIGHPEGQIKKIDGCTVIPLNERLKKYPNDCQDGLVDLYDTTSNVYCMFTQRSFL 630
TGLIYLIGHPEGQIKKIDGCTVIPLNERLKKYPNDCQDGLVDLYDTTSNVYCMFTQRSFL
Sbjct: 541 TGLIYLIGHPEGQIKKIDGCTVIPLNERLKKYPNDCQDGLVDLYDTTSNVYCMFTQRSFL 600
Query: 631 SEVWNTHTLSYDTCFSDGSSGSPVFNASGKLVALHTFGLFYQRGFNVHALIEFGYSMDSI 690
SEVWNTHTLSYDTCFSDGSSGSPVFNASGKLVALHTFGLFYQRGFNVHALIEFGYSMDSI
Sbjct: 601 SEVWNTHTLSYDTCFSDGSSGSPVFNASGKLVALHTFGLFYQRGFNVHALIEFGYSMDSI 660
Query: 691 LCDIKKTNESLYKSLNDEKLETYDEEKGKQESSLQDHQIEPMEC 734
LCDIKKTNESLYKSLNDEKLETYDEEKGKQESSLQDHQIEPMEC
Sbjct: 661 LCDIKKTNESLYKSLNDEKLETYDEEKGKQESSLQDHQIEPMEC 704
>gi|218156273 hypothetical protein LOC374393 isoform b [Homo
sapiens]
Length = 704
Score = 1461 bits (3782), Expect = 0.0
Identities = 704/704 (100%), Positives = 704/704 (100%)
Query: 31 MKQTHADTPVDHCLSGIRKCSSTFKLKSEVNKHETALEMQNPNLNNKECCFTFTLNGNSR 90
MKQTHADTPVDHCLSGIRKCSSTFKLKSEVNKHETALEMQNPNLNNKECCFTFTLNGNSR
Sbjct: 1 MKQTHADTPVDHCLSGIRKCSSTFKLKSEVNKHETALEMQNPNLNNKECCFTFTLNGNSR 60
Query: 91 KLDRSVFTAYGKPSESIYSALSANDYFSERIKNQFNKNIIVYEEKTIDGHINLGMPLKCL 150
KLDRSVFTAYGKPSESIYSALSANDYFSERIKNQFNKNIIVYEEKTIDGHINLGMPLKCL
Sbjct: 61 KLDRSVFTAYGKPSESIYSALSANDYFSERIKNQFNKNIIVYEEKTIDGHINLGMPLKCL 120
Query: 151 PSDSHFKITFGQRKSSKEDGHILRQCENPNMECILFHVVAIGRTRKKIVKINELHEKGSK 210
PSDSHFKITFGQRKSSKEDGHILRQCENPNMECILFHVVAIGRTRKKIVKINELHEKGSK
Sbjct: 121 PSDSHFKITFGQRKSSKEDGHILRQCENPNMECILFHVVAIGRTRKKIVKINELHEKGSK 180
Query: 211 LCIYALKGETIEGALCKDGRFRSDIGEFEWKLKEGHKKIYGKQSMVDEVSGKVLEMDISK 270
LCIYALKGETIEGALCKDGRFRSDIGEFEWKLKEGHKKIYGKQSMVDEVSGKVLEMDISK
Sbjct: 181 LCIYALKGETIEGALCKDGRFRSDIGEFEWKLKEGHKKIYGKQSMVDEVSGKVLEMDISK 240
Query: 271 KKALQQKDIHKKIKQNESATDEINHQSLIQSKKKVHKPKKDGETKDVEHSREQILPPQDL 330
KKALQQKDIHKKIKQNESATDEINHQSLIQSKKKVHKPKKDGETKDVEHSREQILPPQDL
Sbjct: 241 KKALQQKDIHKKIKQNESATDEINHQSLIQSKKKVHKPKKDGETKDVEHSREQILPPQDL 300
Query: 331 SHYIKDKTRQTIPRIRNYYFCSLPRKYRQINSQVRRRPHLGRRYAINLDVQKEAINLLKN 390
SHYIKDKTRQTIPRIRNYYFCSLPRKYRQINSQVRRRPHLGRRYAINLDVQKEAINLLKN
Sbjct: 301 SHYIKDKTRQTIPRIRNYYFCSLPRKYRQINSQVRRRPHLGRRYAINLDVQKEAINLLKN 360
Query: 391 YQTLNEAIMHQYPNFKEEAQWVRKYFREEQKRMNLSPAKQFNIYKKDFGKMTANSVSVAT 450
YQTLNEAIMHQYPNFKEEAQWVRKYFREEQKRMNLSPAKQFNIYKKDFGKMTANSVSVAT
Sbjct: 361 YQTLNEAIMHQYPNFKEEAQWVRKYFREEQKRMNLSPAKQFNIYKKDFGKMTANSVSVAT 420
Query: 451 CEQLTYYSKSVGFMQWDNNGNTGNATCFVFNGGYIFTCRHVVHLMVGKNTHPSLWPDIIS 510
CEQLTYYSKSVGFMQWDNNGNTGNATCFVFNGGYIFTCRHVVHLMVGKNTHPSLWPDIIS
Sbjct: 421 CEQLTYYSKSVGFMQWDNNGNTGNATCFVFNGGYIFTCRHVVHLMVGKNTHPSLWPDIIS 480
Query: 511 KCAKVTFTYTEFCPTPDNWFSIEPWLKVSNENLDYAILKLKENGNAFPPGLWRQISPQPS 570
KCAKVTFTYTEFCPTPDNWFSIEPWLKVSNENLDYAILKLKENGNAFPPGLWRQISPQPS
Sbjct: 481 KCAKVTFTYTEFCPTPDNWFSIEPWLKVSNENLDYAILKLKENGNAFPPGLWRQISPQPS 540
Query: 571 TGLIYLIGHPEGQIKKIDGCTVIPLNERLKKYPNDCQDGLVDLYDTTSNVYCMFTQRSFL 630
TGLIYLIGHPEGQIKKIDGCTVIPLNERLKKYPNDCQDGLVDLYDTTSNVYCMFTQRSFL
Sbjct: 541 TGLIYLIGHPEGQIKKIDGCTVIPLNERLKKYPNDCQDGLVDLYDTTSNVYCMFTQRSFL 600
Query: 631 SEVWNTHTLSYDTCFSDGSSGSPVFNASGKLVALHTFGLFYQRGFNVHALIEFGYSMDSI 690
SEVWNTHTLSYDTCFSDGSSGSPVFNASGKLVALHTFGLFYQRGFNVHALIEFGYSMDSI
Sbjct: 601 SEVWNTHTLSYDTCFSDGSSGSPVFNASGKLVALHTFGLFYQRGFNVHALIEFGYSMDSI 660
Query: 691 LCDIKKTNESLYKSLNDEKLETYDEEKGKQESSLQDHQIEPMEC 734
LCDIKKTNESLYKSLNDEKLETYDEEKGKQESSLQDHQIEPMEC
Sbjct: 661 LCDIKKTNESLYKSLNDEKLETYDEEKGKQESSLQDHQIEPMEC 704
>gi|215983098 hypothetical protein LOC63901 [Homo sapiens]
Length = 611
Score = 261 bits (666), Expect = 2e-69
Identities = 139/330 (42%), Positives = 198/330 (60%), Gaps = 9/330 (2%)
Query: 389 KNYQTLNEAIMHQYPNFKEEAQWVRKYFREEQKRMNLSPAKQFNIYKKDFGKMTANSVSV 448
+N L E I+ QYP+ K E++ + + F+++ K N F +++ FGK+T NS S+
Sbjct: 287 RNTCVLREQIVAQYPSLKRESEKIIENFKKKMKVKNGETL--FELHRTTFGKVTKNSSSI 344
Query: 449 ATCEQLTYYSKSVGFMQWDNNGNTGNATCFVFNGGYIFTCRHVVHLMVGKNTHPSLWPDI 508
+ L S SVG++ WD+ TG ATCFVF G +I TCRHV+ +VG PS W I
Sbjct: 345 KVVKLLVRLSDSVGYLFWDS-ATTGYATCFVFKGLFILTCRHVIDSIVGDGIEPSKWATI 403
Query: 509 ISKCAKVTFTYTEFCPTPDNWFSIEPWLKVSNENLDYAILKLKENGNAFPPGLWRQISPQ 568
I +C +VTF Y E N+F +EPW ++ NE LDYA+LKLKENG P L+ I+P
Sbjct: 404 IGQCVRVTFGYEELKDKETNYFFVEPWFEIHNEELDYAVLKLKENGQQVPMELYNGITPV 463
Query: 569 PSTGLIYLIGHPEGQIKKIDGCTVIPLNERLKKYPNDCQDGLVDLYDTTSNVYCMFTQRS 628
P +GLI++IGHP G+ K+ID C VIP +R KK CQ+ + + M+TQRS
Sbjct: 464 PLSGLIHIIGHPYGEKKQIDACAVIPQGQRAKK----CQERVQSKKAESPEYVHMYTQRS 519
Query: 629 FLSEVWNTHTLSYDTCFSDGSSGSPVFNASGKLVALHTFGLFYQRGFNVHALIEFGYSMD 688
F V N ++YDT F G+SGSPVF++ G LVA+H G Y ++IEFG +M+
Sbjct: 520 FQKIVHNPDVITYDTEFFFGASGSPVFDSKGSLVAMHAAGFAYTYQNETRSIIEFGSTME 579
Query: 689 SILCDIKKTNESLYKS--LNDEKLETYDEE 716
SIL DIK+ ++ Y+ +N + +E +E
Sbjct: 580 SILLDIKQRHKPWYEEVFVNQQDVEMMSDE 609
Score = 138 bits (347), Expect = 2e-32
Identities = 88/268 (32%), Positives = 136/268 (50%), Gaps = 17/268 (6%)
Query: 19 QRTRPE-VSKDTVMKQTHADTPV-----DHCLSGIRKCSSTFKLKSEVNKHETALEMQNP 72
QR+R V++ MK H +PV ++C + + + S ++ N A +P
Sbjct: 6 QRSRKHSVNEKCNMKIEHYFSPVSKEQQNNCSTSLMRMESRGDPRATTNTQ--AQRFHSP 63
Query: 73 NLNNKECCFT------FTLNGNSRKLDRSVFTAYGKPSESIYSALSANDYFSERIKNQFN 126
N ++ TL N R+ + S+Y AL+ + I+
Sbjct: 64 KKNPEDQTMPQNRTIYVTLKVNHRRNQDMKLKLTHSENSSLYMALNTLQAVRKEIETHQG 123
Query: 127 KNIIVYEEKTIDGHINLGMPLKCLPSDSHFKITFGQRKSS-KEDGHILRQCENPNMECIL 185
+ ++V + I +INLGMPL C P ITF Q KS KED HI + + + EC+
Sbjct: 124 QEMLVRGTEGIKEYINLGMPLSCFPEGGQVVITFSQSKSKQKEDNHIFGRQDKASTECVK 183
Query: 186 F--HVVAIGRTRKKIVKINELHEKGSKLCIYALKGETIEGALCKDGRFRSDIGEFEWKLK 243
F H + IG+ +++IVK +LH+KG KLC+YA KGETI+ ALCKDGRF S + +WKL
Sbjct: 184 FYIHAIGIGKCKRRIVKCGKLHKKGRKLCVYAFKGETIKDALCKDGRFLSFLENDDWKLI 243
Query: 244 EGHKKIYGKQSMVDEVSGKVLEMDISKK 271
E + I VDE+ G+ ++++ K+
Sbjct: 244 ENNDTILESTQPVDELEGRYFQVEVEKR 271
>gi|215983096 hypothetical protein LOC63901 [Homo sapiens]
Length = 611
Score = 261 bits (666), Expect = 2e-69
Identities = 139/330 (42%), Positives = 198/330 (60%), Gaps = 9/330 (2%)
Query: 389 KNYQTLNEAIMHQYPNFKEEAQWVRKYFREEQKRMNLSPAKQFNIYKKDFGKMTANSVSV 448
+N L E I+ QYP+ K E++ + + F+++ K N F +++ FGK+T NS S+
Sbjct: 287 RNTCVLREQIVAQYPSLKRESEKIIENFKKKMKVKNGETL--FELHRTTFGKVTKNSSSI 344
Query: 449 ATCEQLTYYSKSVGFMQWDNNGNTGNATCFVFNGGYIFTCRHVVHLMVGKNTHPSLWPDI 508
+ L S SVG++ WD+ TG ATCFVF G +I TCRHV+ +VG PS W I
Sbjct: 345 KVVKLLVRLSDSVGYLFWDS-ATTGYATCFVFKGLFILTCRHVIDSIVGDGIEPSKWATI 403
Query: 509 ISKCAKVTFTYTEFCPTPDNWFSIEPWLKVSNENLDYAILKLKENGNAFPPGLWRQISPQ 568
I +C +VTF Y E N+F +EPW ++ NE LDYA+LKLKENG P L+ I+P
Sbjct: 404 IGQCVRVTFGYEELKDKETNYFFVEPWFEIHNEELDYAVLKLKENGQQVPMELYNGITPV 463
Query: 569 PSTGLIYLIGHPEGQIKKIDGCTVIPLNERLKKYPNDCQDGLVDLYDTTSNVYCMFTQRS 628
P +GLI++IGHP G+ K+ID C VIP +R KK CQ+ + + M+TQRS
Sbjct: 464 PLSGLIHIIGHPYGEKKQIDACAVIPQGQRAKK----CQERVQSKKAESPEYVHMYTQRS 519
Query: 629 FLSEVWNTHTLSYDTCFSDGSSGSPVFNASGKLVALHTFGLFYQRGFNVHALIEFGYSMD 688
F V N ++YDT F G+SGSPVF++ G LVA+H G Y ++IEFG +M+
Sbjct: 520 FQKIVHNPDVITYDTEFFFGASGSPVFDSKGSLVAMHAAGFAYTYQNETRSIIEFGSTME 579
Query: 689 SILCDIKKTNESLYKS--LNDEKLETYDEE 716
SIL DIK+ ++ Y+ +N + +E +E
Sbjct: 580 SILLDIKQRHKPWYEEVFVNQQDVEMMSDE 609
Score = 138 bits (347), Expect = 2e-32
Identities = 88/268 (32%), Positives = 136/268 (50%), Gaps = 17/268 (6%)
Query: 19 QRTRPE-VSKDTVMKQTHADTPV-----DHCLSGIRKCSSTFKLKSEVNKHETALEMQNP 72
QR+R V++ MK H +PV ++C + + + S ++ N A +P
Sbjct: 6 QRSRKHSVNEKCNMKIEHYFSPVSKEQQNNCSTSLMRMESRGDPRATTNTQ--AQRFHSP 63
Query: 73 NLNNKECCFT------FTLNGNSRKLDRSVFTAYGKPSESIYSALSANDYFSERIKNQFN 126
N ++ TL N R+ + S+Y AL+ + I+
Sbjct: 64 KKNPEDQTMPQNRTIYVTLKVNHRRNQDMKLKLTHSENSSLYMALNTLQAVRKEIETHQG 123
Query: 127 KNIIVYEEKTIDGHINLGMPLKCLPSDSHFKITFGQRKSS-KEDGHILRQCENPNMECIL 185
+ ++V + I +INLGMPL C P ITF Q KS KED HI + + + EC+
Sbjct: 124 QEMLVRGTEGIKEYINLGMPLSCFPEGGQVVITFSQSKSKQKEDNHIFGRQDKASTECVK 183
Query: 186 F--HVVAIGRTRKKIVKINELHEKGSKLCIYALKGETIEGALCKDGRFRSDIGEFEWKLK 243
F H + IG+ +++IVK +LH+KG KLC+YA KGETI+ ALCKDGRF S + +WKL
Sbjct: 184 FYIHAIGIGKCKRRIVKCGKLHKKGRKLCVYAFKGETIKDALCKDGRFLSFLENDDWKLI 243
Query: 244 EGHKKIYGKQSMVDEVSGKVLEMDISKK 271
E + I VDE+ G+ ++++ K+
Sbjct: 244 ENNDTILESTQPVDELEGRYFQVEVEKR 271
>gi|215983094 hypothetical protein LOC63901 [Homo sapiens]
Length = 611
Score = 261 bits (666), Expect = 2e-69
Identities = 139/330 (42%), Positives = 198/330 (60%), Gaps = 9/330 (2%)
Query: 389 KNYQTLNEAIMHQYPNFKEEAQWVRKYFREEQKRMNLSPAKQFNIYKKDFGKMTANSVSV 448
+N L E I+ QYP+ K E++ + + F+++ K N F +++ FGK+T NS S+
Sbjct: 287 RNTCVLREQIVAQYPSLKRESEKIIENFKKKMKVKNGETL--FELHRTTFGKVTKNSSSI 344
Query: 449 ATCEQLTYYSKSVGFMQWDNNGNTGNATCFVFNGGYIFTCRHVVHLMVGKNTHPSLWPDI 508
+ L S SVG++ WD+ TG ATCFVF G +I TCRHV+ +VG PS W I
Sbjct: 345 KVVKLLVRLSDSVGYLFWDS-ATTGYATCFVFKGLFILTCRHVIDSIVGDGIEPSKWATI 403
Query: 509 ISKCAKVTFTYTEFCPTPDNWFSIEPWLKVSNENLDYAILKLKENGNAFPPGLWRQISPQ 568
I +C +VTF Y E N+F +EPW ++ NE LDYA+LKLKENG P L+ I+P
Sbjct: 404 IGQCVRVTFGYEELKDKETNYFFVEPWFEIHNEELDYAVLKLKENGQQVPMELYNGITPV 463
Query: 569 PSTGLIYLIGHPEGQIKKIDGCTVIPLNERLKKYPNDCQDGLVDLYDTTSNVYCMFTQRS 628
P +GLI++IGHP G+ K+ID C VIP +R KK CQ+ + + M+TQRS
Sbjct: 464 PLSGLIHIIGHPYGEKKQIDACAVIPQGQRAKK----CQERVQSKKAESPEYVHMYTQRS 519
Query: 629 FLSEVWNTHTLSYDTCFSDGSSGSPVFNASGKLVALHTFGLFYQRGFNVHALIEFGYSMD 688
F V N ++YDT F G+SGSPVF++ G LVA+H G Y ++IEFG +M+
Sbjct: 520 FQKIVHNPDVITYDTEFFFGASGSPVFDSKGSLVAMHAAGFAYTYQNETRSIIEFGSTME 579
Query: 689 SILCDIKKTNESLYKS--LNDEKLETYDEE 716
SIL DIK+ ++ Y+ +N + +E +E
Sbjct: 580 SILLDIKQRHKPWYEEVFVNQQDVEMMSDE 609
Score = 138 bits (347), Expect = 2e-32
Identities = 88/268 (32%), Positives = 136/268 (50%), Gaps = 17/268 (6%)
Query: 19 QRTRPE-VSKDTVMKQTHADTPV-----DHCLSGIRKCSSTFKLKSEVNKHETALEMQNP 72
QR+R V++ MK H +PV ++C + + + S ++ N A +P
Sbjct: 6 QRSRKHSVNEKCNMKIEHYFSPVSKEQQNNCSTSLMRMESRGDPRATTNTQ--AQRFHSP 63
Query: 73 NLNNKECCFT------FTLNGNSRKLDRSVFTAYGKPSESIYSALSANDYFSERIKNQFN 126
N ++ TL N R+ + S+Y AL+ + I+
Sbjct: 64 KKNPEDQTMPQNRTIYVTLKVNHRRNQDMKLKLTHSENSSLYMALNTLQAVRKEIETHQG 123
Query: 127 KNIIVYEEKTIDGHINLGMPLKCLPSDSHFKITFGQRKSS-KEDGHILRQCENPNMECIL 185
+ ++V + I +INLGMPL C P ITF Q KS KED HI + + + EC+
Sbjct: 124 QEMLVRGTEGIKEYINLGMPLSCFPEGGQVVITFSQSKSKQKEDNHIFGRQDKASTECVK 183
Query: 186 F--HVVAIGRTRKKIVKINELHEKGSKLCIYALKGETIEGALCKDGRFRSDIGEFEWKLK 243
F H + IG+ +++IVK +LH+KG KLC+YA KGETI+ ALCKDGRF S + +WKL
Sbjct: 184 FYIHAIGIGKCKRRIVKCGKLHKKGRKLCVYAFKGETIKDALCKDGRFLSFLENDDWKLI 243
Query: 244 EGHKKIYGKQSMVDEVSGKVLEMDISKK 271
E + I VDE+ G+ ++++ K+
Sbjct: 244 ENNDTILESTQPVDELEGRYFQVEVEKR 271
>gi|38505211 hypothetical protein LOC63901 [Homo sapiens]
Length = 611
Score = 261 bits (666), Expect = 2e-69
Identities = 139/330 (42%), Positives = 198/330 (60%), Gaps = 9/330 (2%)
Query: 389 KNYQTLNEAIMHQYPNFKEEAQWVRKYFREEQKRMNLSPAKQFNIYKKDFGKMTANSVSV 448
+N L E I+ QYP+ K E++ + + F+++ K N F +++ FGK+T NS S+
Sbjct: 287 RNTCVLREQIVAQYPSLKRESEKIIENFKKKMKVKNGETL--FELHRTTFGKVTKNSSSI 344
Query: 449 ATCEQLTYYSKSVGFMQWDNNGNTGNATCFVFNGGYIFTCRHVVHLMVGKNTHPSLWPDI 508
+ L S SVG++ WD+ TG ATCFVF G +I TCRHV+ +VG PS W I
Sbjct: 345 KVVKLLVRLSDSVGYLFWDS-ATTGYATCFVFKGLFILTCRHVIDSIVGDGIEPSKWATI 403
Query: 509 ISKCAKVTFTYTEFCPTPDNWFSIEPWLKVSNENLDYAILKLKENGNAFPPGLWRQISPQ 568
I +C +VTF Y E N+F +EPW ++ NE LDYA+LKLKENG P L+ I+P
Sbjct: 404 IGQCVRVTFGYEELKDKETNYFFVEPWFEIHNEELDYAVLKLKENGQQVPMELYNGITPV 463
Query: 569 PSTGLIYLIGHPEGQIKKIDGCTVIPLNERLKKYPNDCQDGLVDLYDTTSNVYCMFTQRS 628
P +GLI++IGHP G+ K+ID C VIP +R KK CQ+ + + M+TQRS
Sbjct: 464 PLSGLIHIIGHPYGEKKQIDACAVIPQGQRAKK----CQERVQSKKAESPEYVHMYTQRS 519
Query: 629 FLSEVWNTHTLSYDTCFSDGSSGSPVFNASGKLVALHTFGLFYQRGFNVHALIEFGYSMD 688
F V N ++YDT F G+SGSPVF++ G LVA+H G Y ++IEFG +M+
Sbjct: 520 FQKIVHNPDVITYDTEFFFGASGSPVFDSKGSLVAMHAAGFAYTYQNETRSIIEFGSTME 579
Query: 689 SILCDIKKTNESLYKS--LNDEKLETYDEE 716
SIL DIK+ ++ Y+ +N + +E +E
Sbjct: 580 SILLDIKQRHKPWYEEVFVNQQDVEMMSDE 609
Score = 138 bits (347), Expect = 2e-32
Identities = 88/268 (32%), Positives = 136/268 (50%), Gaps = 17/268 (6%)
Query: 19 QRTRPE-VSKDTVMKQTHADTPV-----DHCLSGIRKCSSTFKLKSEVNKHETALEMQNP 72
QR+R V++ MK H +PV ++C + + + S ++ N A +P
Sbjct: 6 QRSRKHSVNEKCNMKIEHYFSPVSKEQQNNCSTSLMRMESRGDPRATTNTQ--AQRFHSP 63
Query: 73 NLNNKECCFT------FTLNGNSRKLDRSVFTAYGKPSESIYSALSANDYFSERIKNQFN 126
N ++ TL N R+ + S+Y AL+ + I+
Sbjct: 64 KKNPEDQTMPQNRTIYVTLKVNHRRNQDMKLKLTHSENSSLYMALNTLQAVRKEIETHQG 123
Query: 127 KNIIVYEEKTIDGHINLGMPLKCLPSDSHFKITFGQRKSS-KEDGHILRQCENPNMECIL 185
+ ++V + I +INLGMPL C P ITF Q KS KED HI + + + EC+
Sbjct: 124 QEMLVRGTEGIKEYINLGMPLSCFPEGGQVVITFSQSKSKQKEDNHIFGRQDKASTECVK 183
Query: 186 F--HVVAIGRTRKKIVKINELHEKGSKLCIYALKGETIEGALCKDGRFRSDIGEFEWKLK 243
F H + IG+ +++IVK +LH+KG KLC+YA KGETI+ ALCKDGRF S + +WKL
Sbjct: 184 FYIHAIGIGKCKRRIVKCGKLHKKGRKLCVYAFKGETIKDALCKDGRFLSFLENDDWKLI 243
Query: 244 EGHKKIYGKQSMVDEVSGKVLEMDISKK 271
E + I VDE+ G+ ++++ K+
Sbjct: 244 ENNDTILESTQPVDELEGRYFQVEVEKR 271
>gi|38505209 hypothetical protein LOC63901 [Homo sapiens]
Length = 611
Score = 261 bits (666), Expect = 2e-69
Identities = 139/330 (42%), Positives = 198/330 (60%), Gaps = 9/330 (2%)
Query: 389 KNYQTLNEAIMHQYPNFKEEAQWVRKYFREEQKRMNLSPAKQFNIYKKDFGKMTANSVSV 448
+N L E I+ QYP+ K E++ + + F+++ K N F +++ FGK+T NS S+
Sbjct: 287 RNTCVLREQIVAQYPSLKRESEKIIENFKKKMKVKNGETL--FELHRTTFGKVTKNSSSI 344
Query: 449 ATCEQLTYYSKSVGFMQWDNNGNTGNATCFVFNGGYIFTCRHVVHLMVGKNTHPSLWPDI 508
+ L S SVG++ WD+ TG ATCFVF G +I TCRHV+ +VG PS W I
Sbjct: 345 KVVKLLVRLSDSVGYLFWDS-ATTGYATCFVFKGLFILTCRHVIDSIVGDGIEPSKWATI 403
Query: 509 ISKCAKVTFTYTEFCPTPDNWFSIEPWLKVSNENLDYAILKLKENGNAFPPGLWRQISPQ 568
I +C +VTF Y E N+F +EPW ++ NE LDYA+LKLKENG P L+ I+P
Sbjct: 404 IGQCVRVTFGYEELKDKETNYFFVEPWFEIHNEELDYAVLKLKENGQQVPMELYNGITPV 463
Query: 569 PSTGLIYLIGHPEGQIKKIDGCTVIPLNERLKKYPNDCQDGLVDLYDTTSNVYCMFTQRS 628
P +GLI++IGHP G+ K+ID C VIP +R KK CQ+ + + M+TQRS
Sbjct: 464 PLSGLIHIIGHPYGEKKQIDACAVIPQGQRAKK----CQERVQSKKAESPEYVHMYTQRS 519
Query: 629 FLSEVWNTHTLSYDTCFSDGSSGSPVFNASGKLVALHTFGLFYQRGFNVHALIEFGYSMD 688
F V N ++YDT F G+SGSPVF++ G LVA+H G Y ++IEFG +M+
Sbjct: 520 FQKIVHNPDVITYDTEFFFGASGSPVFDSKGSLVAMHAAGFAYTYQNETRSIIEFGSTME 579
Query: 689 SILCDIKKTNESLYKS--LNDEKLETYDEE 716
SIL DIK+ ++ Y+ +N + +E +E
Sbjct: 580 SILLDIKQRHKPWYEEVFVNQQDVEMMSDE 609
Score = 138 bits (347), Expect = 2e-32
Identities = 88/268 (32%), Positives = 136/268 (50%), Gaps = 17/268 (6%)
Query: 19 QRTRPE-VSKDTVMKQTHADTPV-----DHCLSGIRKCSSTFKLKSEVNKHETALEMQNP 72
QR+R V++ MK H +PV ++C + + + S ++ N A +P
Sbjct: 6 QRSRKHSVNEKCNMKIEHYFSPVSKEQQNNCSTSLMRMESRGDPRATTNTQ--AQRFHSP 63
Query: 73 NLNNKECCFT------FTLNGNSRKLDRSVFTAYGKPSESIYSALSANDYFSERIKNQFN 126
N ++ TL N R+ + S+Y AL+ + I+
Sbjct: 64 KKNPEDQTMPQNRTIYVTLKVNHRRNQDMKLKLTHSENSSLYMALNTLQAVRKEIETHQG 123
Query: 127 KNIIVYEEKTIDGHINLGMPLKCLPSDSHFKITFGQRKSS-KEDGHILRQCENPNMECIL 185
+ ++V + I +INLGMPL C P ITF Q KS KED HI + + + EC+
Sbjct: 124 QEMLVRGTEGIKEYINLGMPLSCFPEGGQVVITFSQSKSKQKEDNHIFGRQDKASTECVK 183
Query: 186 F--HVVAIGRTRKKIVKINELHEKGSKLCIYALKGETIEGALCKDGRFRSDIGEFEWKLK 243
F H + IG+ +++IVK +LH+KG KLC+YA KGETI+ ALCKDGRF S + +WKL
Sbjct: 184 FYIHAIGIGKCKRRIVKCGKLHKKGRKLCVYAFKGETIKDALCKDGRFLSFLENDDWKLI 243
Query: 244 EGHKKIYGKQSMVDEVSGKVLEMDISKK 271
E + I VDE+ G+ ++++ K+
Sbjct: 244 ENNDTILESTQPVDELEGRYFQVEVEKR 271
>gi|117935038 cylicin, basic protein of sperm head cytoskeleton 1
[Homo sapiens]
Length = 651
Score = 40.4 bits (93), Expect = 0.006
Identities = 75/339 (22%), Positives = 132/339 (38%), Gaps = 34/339 (10%)
Query: 5 KTEENKSFSAMEDDQR-------TRPEVSKDTVMKQTHADTPVDHCLSGIRKCSSTFKLK 57
K+++ K + ++ D + T PE SK V ++T D + ++ + K
Sbjct: 117 KSKDEKGGTPLKKDSKKKGGSYATNPE-SKQIVEEKTKRQNEADK--TPLKSSHENEQSK 173
Query: 58 SEVNKHETALEMQNPNLNNKECCFTFTLNG-NSRKLDRSVFTAYGKPSESIYSALSANDY 116
+ ET E QN +K C + NS+K + P + + + ++ND
Sbjct: 174 KSKSSSETNPESQNSKTVSKNCSQKDKKDSKNSKKTNTEFLHTKNNPKKDLKRSKTSNDP 233
Query: 117 FSERI-KNQFNKNIIVYEEKTIDGHINLGMPLKCLPSDSH----FKITFGQRKSSKEDGH 171
SE +N N + ++ ++ D IN L+ ++ K T +K +K++
Sbjct: 234 ISEICSENSLNVDFLMLVGQSDDESINFDAWLRNYSQNNSKNYSLKYTKYTKKDTKKNAK 293
Query: 172 ILRQCENPNMECILFHVVAIGRTRKKIVKINELHEKGSKLCIYALKGETIEGALCKDGRF 231
E+ + + + K VK N + K + E KD R
Sbjct: 294 KSSDAESEDSKD--------AKKDSKKVKKNVKKDDKKKDVKKDTESTDAESGDSKDER- 344
Query: 232 RSDIGEFEWKLKEGHKKIYGKQ--SMVDEVSGKVLEM---DISKKKALQQKDIHKKIKQN 286
D + + KLK+ KK K+ D SG + + KKA + D K K+
Sbjct: 345 -KDTKKDKKKLKKDDKKKDTKKYPESTDTESGDAKDARNDSRNLKKASKNDDKKKDAKKI 403
Query: 287 ESATDEINHQSLIQSKKKVHKPKKDGET---KDVEHSRE 322
+TD + +S+K K KKD +T K V++ E
Sbjct: 404 TFSTDSESELESKESQKDEKKDKKDSKTDNKKSVKNDEE 442
>gi|196114999 special AT-rich sequence binding protein 1 [Homo
sapiens]
Length = 763
Score = 38.9 bits (89), Expect = 0.017
Identities = 38/184 (20%), Positives = 79/184 (42%), Gaps = 13/184 (7%)
Query: 253 QSMVDEVSGKVLEMDISKKKALQQKDIHKKIKQNESATDEINHQSLIQSKKKVHKPKKDG 312
QSM+ + ++S K + +K K+ + E++ S + + H G
Sbjct: 213 QSMISSIVNSTYYANVSAAKCQEFGRWYKHFKKTKDMMVEMDSLSELSQQGANHV--NFG 270
Query: 313 ETKDVEHSREQILPPQDLSHYIKDKTRQTIPRIRNYYFCSLPRKYRQINSQVRRRPHLGR 372
+ ++ EQ P LSH + R +P + S P + +N Q+ L +
Sbjct: 271 QQPVPGNTAEQPPSPAQLSHGSQPSVRTPLPNLHPG-LVSTPISPQLVNQQLVMAQLLNQ 329
Query: 373 RYAINLDVQKEAINLLKNY--------QTLNEAIMHQYPNFKEEAQWVRKYFREEQKRMN 424
+YA+N + ++++N + Y +++N+ + Q E + + ++ R+E KR
Sbjct: 330 QYAVNRLLAQQSLN--QQYLNHPPPVSRSMNKPLEQQVSTNTEVSSEIYQWVRDELKRAG 387
Query: 425 LSPA 428
+S A
Sbjct: 388 ISQA 391
>gi|4506791 special AT-rich sequence binding protein 1 [Homo
sapiens]
Length = 763
Score = 38.9 bits (89), Expect = 0.017
Identities = 38/184 (20%), Positives = 79/184 (42%), Gaps = 13/184 (7%)
Query: 253 QSMVDEVSGKVLEMDISKKKALQQKDIHKKIKQNESATDEINHQSLIQSKKKVHKPKKDG 312
QSM+ + ++S K + +K K+ + E++ S + + H G
Sbjct: 213 QSMISSIVNSTYYANVSAAKCQEFGRWYKHFKKTKDMMVEMDSLSELSQQGANHV--NFG 270
Query: 313 ETKDVEHSREQILPPQDLSHYIKDKTRQTIPRIRNYYFCSLPRKYRQINSQVRRRPHLGR 372
+ ++ EQ P LSH + R +P + S P + +N Q+ L +
Sbjct: 271 QQPVPGNTAEQPPSPAQLSHGSQPSVRTPLPNLHPG-LVSTPISPQLVNQQLVMAQLLNQ 329
Query: 373 RYAINLDVQKEAINLLKNY--------QTLNEAIMHQYPNFKEEAQWVRKYFREEQKRMN 424
+YA+N + ++++N + Y +++N+ + Q E + + ++ R+E KR
Sbjct: 330 QYAVNRLLAQQSLN--QQYLNHPPPVSRSMNKPLEQQVSTNTEVSSEIYQWVRDELKRAG 387
Query: 425 LSPA 428
+S A
Sbjct: 388 ISQA 391
>gi|102467235 inner centromere protein antigens 135/155kDa isoform 1
[Homo sapiens]
Length = 918
Score = 38.1 bits (87), Expect = 0.029
Identities = 45/197 (22%), Positives = 86/197 (43%), Gaps = 28/197 (14%)
Query: 243 KEGHKKIYGKQSMVDEVSGKVLEMDISKKKALQQ------KDIHKKIKQNESAT------ 290
+E K+I K + +DE + K E ++++KA ++ +++ + KQ E A
Sbjct: 593 EEKKKQIEQKFAQIDEKTEKAKEERLAEEKAKKKAAAKKMEEVEARRKQEEEARRLRWLQ 652
Query: 291 ---DEINHQSLIQSKKKVHKP--KKDGETKDVEHSREQILPPQDLSHYIKDKTRQTIPRI 345
+E HQ L+Q KK+ + +K E K + REQ Q+ + + +
Sbjct: 653 QEEEERRHQELLQKKKEEEQERLRKAAEAKRLAEQREQERREQERREQERREQERREQER 712
Query: 346 RNYYFCSLPRKYRQINSQVRRRPHLGRRYAINLDVQKEAINLLKNYQTLNEAIMHQYPNF 405
R + RQ+ Q RRR + L +++A+ L K Q E + +
Sbjct: 713 R--------EQERQLAEQERRREQERLQAERELQEREKALRLQKE-QLQRE--LEEKKKK 761
Query: 406 KEEAQWVRKYFREEQKR 422
+E+ + + +EEQ++
Sbjct: 762 EEQQRLAERQLQEEQEK 778
>gi|102467242 inner centromere protein antigens 135/155kDa isoform 2
[Homo sapiens]
Length = 914
Score = 38.1 bits (87), Expect = 0.029
Identities = 45/197 (22%), Positives = 86/197 (43%), Gaps = 28/197 (14%)
Query: 243 KEGHKKIYGKQSMVDEVSGKVLEMDISKKKALQQ------KDIHKKIKQNESAT------ 290
+E K+I K + +DE + K E ++++KA ++ +++ + KQ E A
Sbjct: 589 EEKKKQIEQKFAQIDEKTEKAKEERLAEEKAKKKAAAKKMEEVEARRKQEEEARRLRWLQ 648
Query: 291 ---DEINHQSLIQSKKKVHKP--KKDGETKDVEHSREQILPPQDLSHYIKDKTRQTIPRI 345
+E HQ L+Q KK+ + +K E K + REQ Q+ + + +
Sbjct: 649 QEEEERRHQELLQKKKEEEQERLRKAAEAKRLAEQREQERREQERREQERREQERREQER 708
Query: 346 RNYYFCSLPRKYRQINSQVRRRPHLGRRYAINLDVQKEAINLLKNYQTLNEAIMHQYPNF 405
R + RQ+ Q RRR + L +++A+ L K Q E + +
Sbjct: 709 R--------EQERQLAEQERRREQERLQAERELQEREKALRLQKE-QLQRE--LEEKKKK 757
Query: 406 KEEAQWVRKYFREEQKR 422
+E+ + + +EEQ++
Sbjct: 758 EEQQRLAERQLQEEQEK 774
>gi|23097308 spectrin repeat containing, nuclear envelope 1 isoform 2
[Homo sapiens]
Length = 8749
Score = 37.0 bits (84), Expect = 0.066
Identities = 22/88 (25%), Positives = 46/88 (52%), Gaps = 5/88 (5%)
Query: 264 LEMDISKKKALQQKDIHKKIKQNESATDEINHQSLIQSKKKVHKPKKDGETKDVEHSREQ 323
LE++I++ Q KD KK++ +++ + I I+ K+ K ++ E K++ H +Q
Sbjct: 4092 LELNIAQNMVSQVKDFVKKLQSKQASVNTI-----IEKVNKLTKKEESPEHKEINHLNDQ 4146
Query: 324 ILPPQDLSHYIKDKTRQTIPRIRNYYFC 351
L S+ + + + + R R+Y+ C
Sbjct: 4147 WLDLCRQSNNLCLQREEDLQRTRDYHDC 4174
>gi|154277116 spectrin repeat containing, nuclear envelope 1 isoform 1
[Homo sapiens]
Length = 8797
Score = 37.0 bits (84), Expect = 0.066
Identities = 22/88 (25%), Positives = 46/88 (52%), Gaps = 5/88 (5%)
Query: 264 LEMDISKKKALQQKDIHKKIKQNESATDEINHQSLIQSKKKVHKPKKDGETKDVEHSREQ 323
LE++I++ Q KD KK++ +++ + I I+ K+ K ++ E K++ H +Q
Sbjct: 4163 LELNIAQNMVSQVKDFVKKLQSKQASVNTI-----IEKVNKLTKKEESPEHKEINHLNDQ 4217
Query: 324 ILPPQDLSHYIKDKTRQTIPRIRNYYFC 351
L S+ + + + + R R+Y+ C
Sbjct: 4218 WLDLCRQSNNLCLQREEDLQRTRDYHDC 4245
>gi|71043500 beta 1,4-N-acetylgalactosaminyltransferase-transferase
3 [Homo sapiens]
Length = 998
Score = 35.8 bits (81), Expect = 0.15
Identities = 16/71 (22%), Positives = 35/71 (49%)
Query: 368 PHLGRRYAINLDVQKEAINLLKNYQTLNEAIMHQYPNFKEEAQWVRKYFREEQKRMNLSP 427
PH RR +N Q+ + + + + A++H K +A+WV+++ ++ + ++
Sbjct: 757 PHNRRRQVLNTRAQEPKLCWPQGFSWSHRAVVHFVVPVKNQARWVQQFIKDMENLFQVTG 816
Query: 428 AKQFNIYKKDF 438
FNI D+
Sbjct: 817 DPHFNIVITDY 827
>gi|188219599 N-myc and STAT interactor [Homo sapiens]
Length = 307
Score = 35.8 bits (81), Expect = 0.15
Identities = 35/163 (21%), Positives = 70/163 (42%), Gaps = 19/163 (11%)
Query: 248 KIYGKQSMVDEVSGKVLEMDISKKKALQQKDIHKKIKQNESATDEINHQSLIQSKK---- 303
K + + + K L +I+KK +K+I K + + AT E + I K
Sbjct: 13 KEHSPDEFIKDEQNKGLIDEITKKNIQLKKEIQKLETELQEATKEFQIKEDIPETKMKFL 72
Query: 304 KVHKPKKDGETKDVEHSRE-------QILPPQDLSHYIKDKTRQTIPRIRNYYFCSLPRK 356
V P+ D + ++ S + +I Q L + K++ Q + + ++ +
Sbjct: 73 SVETPENDSQLSNISCSFQVSSKVPYEIQKGQALITFEKEEVAQNVVSMSKHHV-----Q 127
Query: 357 YRQINSQVRRRP---HLGRRYAINLDVQKEAINLLKNYQTLNE 396
+ +N +V +P + G R+ + ++V K IN+ + TL E
Sbjct: 128 IKDVNLEVTAKPVPLNSGVRFQVYVEVSKMKINVTEIPDTLRE 170
>gi|148746195 trichohyalin [Homo sapiens]
Length = 1943
Score = 34.7 bits (78), Expect = 0.33
Identities = 34/204 (16%), Positives = 93/204 (45%), Gaps = 20/204 (9%)
Query: 237 EFEWKLKEGHKKIYGKQSMVDEVSGKVLEMDISKKKALQQKDIHKKIKQNESATDEINHQ 296
E E + ++ ++ Y K+ + + ++L + K++ +++ +++ ++ + +++ +
Sbjct: 1007 EREKRRRQEWERQYRKKDELQQEEEQLLREEREKRRLQERERQYREEEELQQEEEQLLGE 1066
Query: 297 SLIQSKKKVHKPKKDGETKDVEHSREQILPPQDLSHYIKDKTRQTIPRIRNYYFCSLPRK 356
+++++ ++ + ++++ EQ+L + +++ RQ C +
Sbjct: 1067 ER-ETRRRQELERQYRKEEELQQEEEQLLREEPEKRRRQERERQ----------CREEEE 1115
Query: 357 YRQINSQV-------RRRPHLGRRYAINLDVQKEAINLLKN--YQTLNEAIMHQYPNFKE 407
+Q Q+ RRR L R+Y +VQ+E LL+ + + + QY +E
Sbjct: 1116 LQQEEEQLLREEREKRRRQELERQYREEEEVQQEEEQLLREEPEKRRRQELERQYREEEE 1175
Query: 408 EAQWVRKYFREEQKRMNLSPAKQF 431
Q + REEQ++ +Q+
Sbjct: 1176 LQQEEEQLLREEQEKRRQERERQY 1199
>gi|71061468 centromere protein E [Homo sapiens]
Length = 2701
Score = 34.7 bits (78), Expect = 0.33
Identities = 49/238 (20%), Positives = 100/238 (42%), Gaps = 25/238 (10%)
Query: 196 KKIVKINELHEKGSKLCIYALKGETI----EGALCKDGRFRSDIGEFEWKLKEGHKKIYG 251
K + N L E ++ I + E + E + + + + E K+KE +K Y
Sbjct: 1570 KMLELTNRLQESQEEIQIMIKEKEEMKRVQEALQIERDQLKENTKEIVAKMKESQEKEYQ 1629
Query: 252 --KQSMVDEVSGKVLEMDISKKKALQQKDIHKKIKQNESATDEINHQSLIQSKKKVHKPK 309
K + V+E K+ E++ K++ QK + I+ +I H++L + + V K
Sbjct: 1630 FLKMTAVNETQEKMCEIEHLKEQFETQKLNLENIETENIRLTQILHENL-EEMRSVTK-- 1686
Query: 310 KDGETKDVEHSREQILPPQDLSHYIKDKTRQTIPRIRNYYFCSLPRKYRQINSQVRRRPH 369
E D+ E + +D +K+ R+TI R L ++ + + H
Sbjct: 1687 ---ERDDLRSVEETLKVERD---QLKENLRETITR-------DLEKQEELKIVHMHLKEH 1733
Query: 370 ---LGRRYAINLDVQKEAINLLKNYQTLNEAIMHQYPNFKEEAQWVRKYFREEQKRMN 424
+ + I + E N+ K+ + N+A+ Q +EE + + +E+Q+ ++
Sbjct: 1734 QETIDKLRGIVSEKTNEISNMQKDLEHSNDALKAQDLKIQEELRIAHMHLKEQQETID 1791
>gi|109240556 RUN and FYVE domain-containing 2 isoform a [Homo
sapiens]
Length = 641
Score = 34.7 bits (78), Expect = 0.33
Identities = 34/189 (17%), Positives = 87/189 (46%), Gaps = 26/189 (13%)
Query: 243 KEGHKK---IYGKQSMVDEVSGKVLEMDISKKKALQQKDIHKK---IKQNESATDEINH- 295
K+ H+K + G + ++EV K + +++ +K + + +K I + E T++I
Sbjct: 373 KDIHEKQDTLIGLRQQLEEV--KAINIEMYQKLQGSEDGLKEKNEIIARLEEKTNKITAA 430
Query: 296 -QSLIQSKKKVHKPKKDGETKDVEHSREQILPPQDLSHYIKDKTRQTIPRIRNYYFCSLP 354
+ L Q ++ K + + E +D ++ +E + L I K +Q +
Sbjct: 431 MRQLEQRLQQAEKAQMEAEDEDEKYLQECLSKSDSLQKQISQKEKQLV------------ 478
Query: 355 RKYRQINSQVRRRPHLGRRYAINLDVQKEAINLLKNYQTLNEAIMHQYPNFKEEAQWVRK 414
Q+ + ++ + +L +K+A++ L+N ++ ++ N ++E Q ++K
Sbjct: 479 ----QLETDLKIEKEWRQTLQEDLQKEKDALSHLRNETQQIISLKKEFLNLQDENQQLKK 534
Query: 415 YFREEQKRM 423
+ E+++ +
Sbjct: 535 IYHEQEQAL 543
>gi|33620716 retinoblastoma-binding protein 6 isoform 2 [Homo sapiens]
Length = 1758
Score = 34.3 bits (77), Expect = 0.42
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 267 DISKKKALQQKDIHKKIKQNESATDEINHQ-SLIQSKKKVHKPKKDGETKDVEHSREQ 323
D KKK ++K HKK K+++ + L +S+K HK KK + KD E +E+
Sbjct: 1691 DSKKKKKKKEKKKHKKHKKHKKHKKHAGTEVELEKSQKHKHKKKKSKKNKDKEKEKEK 1748
>gi|33620769 retinoblastoma-binding protein 6 isoform 1 [Homo sapiens]
Length = 1792
Score = 34.3 bits (77), Expect = 0.42
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 267 DISKKKALQQKDIHKKIKQNESATDEINHQ-SLIQSKKKVHKPKKDGETKDVEHSREQ 323
D KKK ++K HKK K+++ + L +S+K HK KK + KD E +E+
Sbjct: 1725 DSKKKKKKKEKKKHKKHKKHKKHKKHAGTEVELEKSQKHKHKKKKSKKNKDKEKEKEK 1782
>gi|8922950 meiosis-specific nuclear structural 1 [Homo sapiens]
Length = 495
Score = 34.3 bits (77), Expect = 0.42
Identities = 35/161 (21%), Positives = 73/161 (45%), Gaps = 15/161 (9%)
Query: 173 LRQCENPNMECILFHVVAIGRTRKKIVKINELHEKGSKLCIYALKGETIEGALCKDGRFR 232
LR +N E + + K++ ++ E+ + + LK E++ KD + R
Sbjct: 57 LRLLQNEQFELDMEEAIQKAEENKRLKELQLKQEEKLAMELAKLKHESL-----KDEKMR 111
Query: 233 SDIGEFEWKLKEGHKKIYGKQSMVDEVSGKVLEMDISKKKALQQK--------DIHKKIK 284
+ E +L+E KK+ M E + ++ E D K + +++ + HK+I
Sbjct: 112 QQVRENSIELRELEKKLKAAY-MNKERAAQIAEKDAIKYEQMKRDAEIAKTMMEEHKRII 170
Query: 285 QNESATDEINHQSLIQSKKKVHKPKKDGETKDVEHSREQIL 325
+ E+A ++ +++ Q + K ++ E K E + EQ+L
Sbjct: 171 KEENAAEDKRNKAKAQYYLDLEKQLEEQEKKKQE-AYEQLL 210
>gi|19924131 RAD50 homolog isoform 2 [Homo sapiens]
Length = 1173
Score = 33.5 bits (75), Expect = 0.72
Identities = 36/175 (20%), Positives = 73/175 (41%), Gaps = 27/175 (15%)
Query: 255 MVDEVSGKVLEMDISKKKALQQ--KDIHKKIKQNESATDEINHQSLIQ---SKKKVHKPK 309
M +E S KV D++ + Q KD+ +KI Q + I+ +Q +K+ + K
Sbjct: 640 MPEEESAKVCLTDVTIMERFQMELKDVERKIAQQAAKLQGIDLDRTVQQVNQEKQEKQHK 699
Query: 310 KDGETKDVEHSREQILPPQDLSHYIKDKTRQTIPRIRNYYFCSLPRKYRQINSQVRRRPH 369
D + +E +R+ I Q+ ++K T + L + QI++ ++RR
Sbjct: 700 LDTVSSKIELNRKLIQDQQEQIQHLKSTTNE------------LKSEKLQISTNLQRRQQ 747
Query: 370 LGRRYAINLDVQKEAINLLKNYQTLNEAIMHQYPNFKEEAQWVRKYFREEQKRMN 424
L +++ + L Q+L I + K+ +E+++ +N
Sbjct: 748 L----------EEQTVELSTEVQSLYREIKDAKEQVSPLETTLEKFQQEKEELIN 792
>gi|19924129 RAD50 homolog isoform 1 [Homo sapiens]
Length = 1312
Score = 33.5 bits (75), Expect = 0.72
Identities = 36/175 (20%), Positives = 73/175 (41%), Gaps = 27/175 (15%)
Query: 255 MVDEVSGKVLEMDISKKKALQQ--KDIHKKIKQNESATDEINHQSLIQ---SKKKVHKPK 309
M +E S KV D++ + Q KD+ +KI Q + I+ +Q +K+ + K
Sbjct: 779 MPEEESAKVCLTDVTIMERFQMELKDVERKIAQQAAKLQGIDLDRTVQQVNQEKQEKQHK 838
Query: 310 KDGETKDVEHSREQILPPQDLSHYIKDKTRQTIPRIRNYYFCSLPRKYRQINSQVRRRPH 369
D + +E +R+ I Q+ ++K T + L + QI++ ++RR
Sbjct: 839 LDTVSSKIELNRKLIQDQQEQIQHLKSTTNE------------LKSEKLQISTNLQRRQQ 886
Query: 370 LGRRYAINLDVQKEAINLLKNYQTLNEAIMHQYPNFKEEAQWVRKYFREEQKRMN 424
L +++ + L Q+L I + K+ +E+++ +N
Sbjct: 887 L----------EEQTVELSTEVQSLYREIKDAKEQVSPLETTLEKFQQEKEELIN 931
>gi|219803769 trichoplein [Homo sapiens]
Length = 498
Score = 33.1 bits (74), Expect = 0.95
Identities = 51/251 (20%), Positives = 104/251 (41%), Gaps = 44/251 (17%)
Query: 240 WKLKEGHKKIYGKQSMVDEVSGKVLEMDI--SKKKALQQKDIHKKIKQNESATDEINHQS 297
W++++ KK +Q E K E + ++++AL++ ++ +Q E D++ ++
Sbjct: 166 WEMQKEEKK---QQEATAEQENKRYENEYERARREALERMKAEEERRQLE---DKLQAEA 219
Query: 298 LIQSKKKVHKPKKDGETKDVEHSREQILPPQ-DLSHYIKDKTRQTIPR--------IRNY 348
L+Q +++ K+ E ++ +E +L + +L +++ + R +R+
Sbjct: 220 LLQQMEELKL--KEVEATKLKKEQENLLKQRWELERLEEERKQMEAFRQKAELGRFLRHQ 277
Query: 349 YFCSLPRKYRQINSQVR----------------RRPHLGRRYAINLDV--QKEAINLLKN 390
Y L R+ +QI ++ +R HL RR + DV K+AI
Sbjct: 278 YNAQLSRRTQQIQEELEADRRILQALLEKEDESQRLHLARREQVMADVAWMKQAIEEQLQ 337
Query: 391 YQTLNEAIMHQYPNF-------KEEAQWVRKYFREEQKRMNLSPAKQFNIYKKDFGKMTA 443
+ EA + K EA+W R+ ++ + +Q I +K A
Sbjct: 338 LERAREAELQMLLREEAKEMWEKREAEWARERSARDRLMSEVLTGRQQQIQEKIEQNRRA 397
Query: 444 NSVSVATCEQL 454
S+ EQL
Sbjct: 398 QEESLKHREQL 408
>gi|14150056 trichoplein [Homo sapiens]
Length = 498
Score = 33.1 bits (74), Expect = 0.95
Identities = 51/251 (20%), Positives = 104/251 (41%), Gaps = 44/251 (17%)
Query: 240 WKLKEGHKKIYGKQSMVDEVSGKVLEMDI--SKKKALQQKDIHKKIKQNESATDEINHQS 297
W++++ KK +Q E K E + ++++AL++ ++ +Q E D++ ++
Sbjct: 166 WEMQKEEKK---QQEATAEQENKRYENEYERARREALERMKAEEERRQLE---DKLQAEA 219
Query: 298 LIQSKKKVHKPKKDGETKDVEHSREQILPPQ-DLSHYIKDKTRQTIPR--------IRNY 348
L+Q +++ K+ E ++ +E +L + +L +++ + R +R+
Sbjct: 220 LLQQMEELKL--KEVEATKLKKEQENLLKQRWELERLEEERKQMEAFRQKAELGRFLRHQ 277
Query: 349 YFCSLPRKYRQINSQVR----------------RRPHLGRRYAINLDV--QKEAINLLKN 390
Y L R+ +QI ++ +R HL RR + DV K+AI
Sbjct: 278 YNAQLSRRTQQIQEELEADRRILQALLEKEDESQRLHLARREQVMADVAWMKQAIEEQLQ 337
Query: 391 YQTLNEAIMHQYPNF-------KEEAQWVRKYFREEQKRMNLSPAKQFNIYKKDFGKMTA 443
+ EA + K EA+W R+ ++ + +Q I +K A
Sbjct: 338 LERAREAELQMLLREEAKEMWEKREAEWARERSARDRLMSEVLTGRQQQIQEKIEQNRRA 397
Query: 444 NSVSVATCEQL 454
S+ EQL
Sbjct: 398 QEESLKHREQL 408
>gi|116014339 olfactomedin-like 2A [Homo sapiens]
Length = 652
Score = 33.1 bits (74), Expect = 0.95
Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 9/71 (12%)
Query: 237 EFEWK---LKEGHKKIYGKQSMVDEVSGKVLEMDISK------KKALQQKDIHKKIKQNE 287
E EWK LK+ ++ QSMVD + G + MD+ K K A Q + + IK N
Sbjct: 101 ENEWKMEKLKKQAPELLKLQSMVDLLEGTLYSMDLMKVHAYVHKVASQMNTLEESIKANL 160
Query: 288 SATDEINHQSL 298
S +E+ S+
Sbjct: 161 SRENEVVKDSV 171
>gi|110624781 myosin, heavy polypeptide 13, skeletal muscle [Homo
sapiens]
Length = 1938
Score = 32.7 bits (73), Expect = 1.2
Identities = 29/135 (21%), Positives = 61/135 (45%), Gaps = 23/135 (17%)
Query: 189 VAIGRTRKKIVKI-NELHEKGSKLCIYALKG-ETIEGALCKDGRFRSDIGEFEWKLKEGH 246
+A+ +K+I K+ N + E ++L + +G E ++GA ++ + E ++ +E H
Sbjct: 1807 LALKGGKKQIQKLENRVRELENELDVEQKRGAEALKGA----HKYERKVKEMTYQAEEDH 1862
Query: 247 KKIYGKQSMVDEVSGKVLEMDISKKKALQQKDIHKKIKQNESATDEINHQSLIQSKKKVH 306
K I Q +VD++ KV K K+ +E + L + ++ H
Sbjct: 1863 KNILRLQDLVDKLQAKV-----------------KSYKRQAEEAEEQANTQLSRCRRVQH 1905
Query: 307 KPKKDGETKDVEHSR 321
+ ++ E D+ S+
Sbjct: 1906 ELEEAAERADIAESQ 1920
>gi|110815815 centlein isoform 1 [Homo sapiens]
Length = 1406
Score = 32.7 bits (73), Expect = 1.2
Identities = 28/131 (21%), Positives = 57/131 (43%), Gaps = 5/131 (3%)
Query: 219 ETIEGALCKDGRFRSDIGEFEW---KLKEGHKKIYGKQSMVDEVSGKVLEMDISKKKALQ 275
E +E L K + + FE KLKEG+KK+ + + + + E +++K L+
Sbjct: 685 EMLEQTLQKVTELENRLKSFEKRSRKLKEGNKKLMKENDFLKSLLKQQQEDTETREKELE 744
Query: 276 QKDIHKKIKQNESATDEINHQSLIQSKKKVHKPKKDGETKDVEHSREQILPPQDLSHYIK 335
Q I K K E E+ + + ++ E + + E+++ P + SH
Sbjct: 745 Q--IIKGSKDVEKENTELQVKISELETEVTSLRRQVAEANALRNENEELINPMEKSHQSA 802
Query: 336 DKTRQTIPRIR 346
D+ + + ++
Sbjct: 803 DRAKSEMATMK 813
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.133 0.400
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,929,532
Number of Sequences: 37866
Number of extensions: 1360061
Number of successful extensions: 4234
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 64
Number of HSP's that attempted gapping in prelim test: 4147
Number of HSP's gapped (non-prelim): 131
length of query: 734
length of database: 18,247,518
effective HSP length: 110
effective length of query: 624
effective length of database: 14,082,258
effective search space: 8787328992
effective search space used: 8787328992
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.