Guide to the Human Genome
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Name: ALKBH8 Sequence: fasta or formatted (664aa) NCBI GI: 195927056
Description:

alkB, alkylation repair homolog 8

Referenced in:

tRNA Enzymes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.4         29           2
 C cysteine            2.3         15           1
 D aspartate           5.1         34           2
 E glutamate           7.2         48           3
 F phenylalanine       3.2         21           1
 G glycine             6.6         44           2
 H histidine           3.2         21           2
 I isoleucine          4.8         32           2
 K lysine              6.8         45           2
 L leucine             8.4         56           2
 M methionine          2.0         13           1
 N asparagine          4.2         28           3
 P proline             5.1         34           2
 Q glutamine           5.0         33           1
 R arginine            6.2         41           2
 S serine              8.9         59           2
 T threonine           4.2         28           2
 V valine              7.7         51           2
 W tryptophan          1.2          8           1
 Y tyrosine            3.6         24           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   alkB, alkylation repair homolog 8 
LOC646804             0.220   PREDICTED: hypothetical protein 
LOC646804             0.220   PREDICTED: hypothetical protein 
LOC646804             0.220   PREDICTED: hypothetical protein 
C8orf79               0.102   hypothetical protein LOC57604 isoform 1 
ALKBH6                0.027   alkB, alkylation repair homolog 6 isoform 2 
C8orf79               0.023   hypothetical protein LOC57604 isoform 2 
ALKBH4                0.015   alkB, alkylation repair homolog 4 
TIAL1                 0.008   TIA-1 related protein isoform 2 
TIAL1                 0.008   TIA-1 related protein isoform 1 
WBSCR22               0.008   Williams Beuren syndrome chromosome region 22 protei...
METTL7A               0.008   methyltransferase like 7A 
ALKBH5                0.008   alkB, alkylation repair homolog 5 
METTL2B               0.007   methyltransferase like 2B 
PPIL4                 0.007   peptidylprolyl isomerase-like 4 
TIA1                  0.007   TIA1 protein isoform 1 
TIA1                  0.007   TIA1 protein isoform 2 
METTL2A               0.007   methyltransferase like 2A 
A1CF                  0.006   apobec-1 complementation factor isoform 2 
A1CF                  0.006   apobec-1 complementation factor isoform 1 
ALKBH6                0.006   alkB, alkylation repair homolog 6 isoform 1 
PABPC5                0.005   poly(A) binding protein, cytoplasmic 5 
DDX11                 0.005   DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 iso...
DDX11                 0.005   DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 iso...
DDX11                 0.005   DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 iso...
SCAPER                0.005   S-phase cyclin A-associated protein in the ER isofo...
SCAPER                0.005   S-phase cyclin A-associated protein in the ER isofo...
ARNT                  0.005   aryl hydrocarbon receptor nuclear translocator isofo...
ARNT                  0.005   aryl hydrocarbon receptor nuclear translocator isofor...
SOX10                 0.005   SRY (sex determining region Y)-box 10 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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