BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|38488720 DiGeorge syndrome critical region gene 8 [Homo sapiens] (773 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|38488720 DiGeorge syndrome critical region gene 8 [Homo sapiens] 1564 0.0 gi|70167113 adenosine deaminase, RNA-specific isoform d [Homo sa... 53 1e-06 gi|70167032 adenosine deaminase, RNA-specific isoform c [Homo sa... 53 1e-06 gi|70166944 adenosine deaminase, RNA-specific isoform b [Homo sa... 53 1e-06 gi|70166852 adenosine deaminase, RNA-specific isoform a [Homo sa... 53 1e-06 gi|213417919 protein kinase, interferon-inducible double strande... 42 0.002 gi|213417911 protein kinase, interferon-inducible double strande... 42 0.002 gi|4505581 protein kinase, interferon-inducible double stranded ... 42 0.002 gi|212276078 leucine rich repeat (in FLII) interacting protein 1... 42 0.002 gi|212276096 leucine rich repeat (in FLII) interacting protein 1... 42 0.003 gi|237681091 RNA-specific adenosine deaminase B1 isoform 7 [Homo... 41 0.004 gi|7669479 RNA-specific adenosine deaminase B1 isoform 3 [Homo s... 41 0.004 gi|7669477 RNA-specific adenosine deaminase B1 isoform 2 [Homo s... 41 0.004 gi|4501919 RNA-specific adenosine deaminase B1 isoform 1 [Homo s... 41 0.004 gi|222352183 neural precursor cell expressed, developmentally do... 39 0.018 gi|21361472 neural precursor cell expressed, developmentally dow... 39 0.018 gi|222352094 neural precursor cell expressed, developmentally do... 39 0.018 gi|222352092 neural precursor cell expressed, developmentally do... 39 0.018 gi|222352090 neural precursor cell expressed, developmentally do... 39 0.018 gi|222352088 neural precursor cell expressed, developmentally do... 39 0.018 gi|222352086 neural precursor cell expressed, developmentally do... 39 0.018 gi|222352084 neural precursor cell expressed, developmentally do... 39 0.018 gi|222352082 neural precursor cell expressed, developmentally do... 39 0.018 gi|19743840 TAR RNA binding protein 2 isoform a [Homo sapiens] 39 0.018 gi|19743838 TAR RNA binding protein 2 isoform b [Homo sapiens] 39 0.024 gi|85068512 TAR RNA binding protein 2 isoform b [Homo sapiens] 39 0.024 gi|5454088 acidic (leucine-rich) nuclear phosphoprotein 32 famil... 39 0.024 gi|239756368 PREDICTED: similar to acidic (leucine-rich) nuclear... 38 0.041 gi|239750893 PREDICTED: similar to acidic (leucine-rich) nuclear... 38 0.041 gi|5453682 hexamethylene bis-acetamide inducible 1 [Homo sapiens] 37 0.070 >gi|38488720 DiGeorge syndrome critical region gene 8 [Homo sapiens] Length = 773 Score = 1564 bits (4050), Expect = 0.0 Identities = 773/773 (100%), Positives = 773/773 (100%) Query: 1 METDESPSPLPCGPAGEAVMESRARPFQALPREQSPPPPLQTSSGAEVMDVGSGGDGQSE 60 METDESPSPLPCGPAGEAVMESRARPFQALPREQSPPPPLQTSSGAEVMDVGSGGDGQSE Sbjct: 1 METDESPSPLPCGPAGEAVMESRARPFQALPREQSPPPPLQTSSGAEVMDVGSGGDGQSE 60 Query: 61 LPAEDPFNFYGASLLSKGSFSKGRLLIDPNCSGHSPRTARHAPAVRKFSPDLKLLKDVKI 120 LPAEDPFNFYGASLLSKGSFSKGRLLIDPNCSGHSPRTARHAPAVRKFSPDLKLLKDVKI Sbjct: 61 LPAEDPFNFYGASLLSKGSFSKGRLLIDPNCSGHSPRTARHAPAVRKFSPDLKLLKDVKI 120 Query: 121 SVSFTESCRSKDRKVLYTGAERDVRAECGLLLSPVSGDVHACPFGGSVGDGVGIGGESAD 180 SVSFTESCRSKDRKVLYTGAERDVRAECGLLLSPVSGDVHACPFGGSVGDGVGIGGESAD Sbjct: 121 SVSFTESCRSKDRKVLYTGAERDVRAECGLLLSPVSGDVHACPFGGSVGDGVGIGGESAD 180 Query: 181 KKDEENELDQEKRVEYAVLDELEDFTDNLELDEEGAGGFTAKAIVQRDRVDEEALNFPYE 240 KKDEENELDQEKRVEYAVLDELEDFTDNLELDEEGAGGFTAKAIVQRDRVDEEALNFPYE Sbjct: 181 KKDEENELDQEKRVEYAVLDELEDFTDNLELDEEGAGGFTAKAIVQRDRVDEEALNFPYE 240 Query: 241 DDFDNDVDALLEEGLCAPKKRRTEEKYGGDSDHPSDGETSVQPMMTKIKTVLKSRGRPPT 300 DDFDNDVDALLEEGLCAPKKRRTEEKYGGDSDHPSDGETSVQPMMTKIKTVLKSRGRPPT Sbjct: 241 DDFDNDVDALLEEGLCAPKKRRTEEKYGGDSDHPSDGETSVQPMMTKIKTVLKSRGRPPT 300 Query: 301 EPLPDGWIMTFHNSGVPVYLHRESRVVTWSRPYFLGTGSIRKHDPPLSSIPCLHYKKMKD 360 EPLPDGWIMTFHNSGVPVYLHRESRVVTWSRPYFLGTGSIRKHDPPLSSIPCLHYKKMKD Sbjct: 301 EPLPDGWIMTFHNSGVPVYLHRESRVVTWSRPYFLGTGSIRKHDPPLSSIPCLHYKKMKD 360 Query: 361 NEEREQSSDLTPSGDVSPVKPLSRSAELEFPLDEPDSMGADPGPPDEKDPLGAEAAPGAL 420 NEEREQSSDLTPSGDVSPVKPLSRSAELEFPLDEPDSMGADPGPPDEKDPLGAEAAPGAL Sbjct: 361 NEEREQSSDLTPSGDVSPVKPLSRSAELEFPLDEPDSMGADPGPPDEKDPLGAEAAPGAL 420 Query: 421 GQVKAKVEVCKDESVDLEEFRSYLEKRFDFEQVTVKKFRTWAERRQFNREMKRKQAESER 480 GQVKAKVEVCKDESVDLEEFRSYLEKRFDFEQVTVKKFRTWAERRQFNREMKRKQAESER Sbjct: 421 GQVKAKVEVCKDESVDLEEFRSYLEKRFDFEQVTVKKFRTWAERRQFNREMKRKQAESER 480 Query: 481 PILPANQKLITLSVQDAPTKKEFVINPNGKSEVCILHEYMQRVLKVRPVYNFFECENPSE 540 PILPANQKLITLSVQDAPTKKEFVINPNGKSEVCILHEYMQRVLKVRPVYNFFECENPSE Sbjct: 481 PILPANQKLITLSVQDAPTKKEFVINPNGKSEVCILHEYMQRVLKVRPVYNFFECENPSE 540 Query: 541 PFGASVTIDGVTYGSGTASSKKLAKNKAARATLEILIPDFVKQTSEEKPKDSEELEYFNH 600 PFGASVTIDGVTYGSGTASSKKLAKNKAARATLEILIPDFVKQTSEEKPKDSEELEYFNH Sbjct: 541 PFGASVTIDGVTYGSGTASSKKLAKNKAARATLEILIPDFVKQTSEEKPKDSEELEYFNH 600 Query: 601 ISIEDSRVYELTSKAGLLSPYQILHECLKRNHGMGDTSIKFEVVPGKNQKSEYVMACGKH 660 ISIEDSRVYELTSKAGLLSPYQILHECLKRNHGMGDTSIKFEVVPGKNQKSEYVMACGKH Sbjct: 601 ISIEDSRVYELTSKAGLLSPYQILHECLKRNHGMGDTSIKFEVVPGKNQKSEYVMACGKH 660 Query: 661 TVRGWCKNKRVGKQLASQKILQLLHPHVKNWGSLLRMYGRESSKMVKQETSDKSVIELQQ 720 TVRGWCKNKRVGKQLASQKILQLLHPHVKNWGSLLRMYGRESSKMVKQETSDKSVIELQQ Sbjct: 661 TVRGWCKNKRVGKQLASQKILQLLHPHVKNWGSLLRMYGRESSKMVKQETSDKSVIELQQ 720 Query: 721 YAKKNKPNLHILSKLQEEMKRLAEEREETRKKPKMSIVASAQPGGEPLCTVDV 773 YAKKNKPNLHILSKLQEEMKRLAEEREETRKKPKMSIVASAQPGGEPLCTVDV Sbjct: 721 YAKKNKPNLHILSKLQEEMKRLAEEREETRKKPKMSIVASAQPGGEPLCTVDV 773 >gi|70167113 adenosine deaminase, RNA-specific isoform d [Homo sapiens] Length = 931 Score = 52.8 bits (125), Expect = 1e-06 Identities = 56/196 (28%), Positives = 84/196 (42%), Gaps = 26/196 (13%) Query: 510 KSEVCILHEYMQRVLKVRPVYNFFECENPSEP-FGASVTIDGVTYGSGTASSKKLAKNKA 568 K+ + L EY Q + + P EP F V I+G + A SKK+AK A Sbjct: 207 KNPISGLLEYAQFASQTCEFNMIEQSGPPHEPRFKFQVVINGREFPPAEAGSKKVAKQDA 266 Query: 569 ARATLEILIPDFVKQTSEEKPKDSEELEYFNHISIE---------DSRVYELTSKAGLLS 619 A + IL+ E K KDS + E +H S E + TS S Sbjct: 267 AMKAMTILL-------EEAKAKDSGKSEESSHYSTEKESEKTAESQTPTPSATSFFSGKS 319 Query: 620 PYQILHECLKRNHGMGDTSIKFEVV----PGKNQKSEYVMACGKHTVRG-WCKNKRVGKQ 674 P L EC+ H +G+ S +F ++ P K +Y +A G T +K+V KQ Sbjct: 320 PVTTLLECM---HKLGN-SCEFRLLSKEGPAHEPKFQYCVAVGAQTFPSVSAPSKKVAKQ 375 Query: 675 LASQKILQLLHPHVKN 690 +A+++ ++ LH N Sbjct: 376 MAAEEAMKALHGEATN 391 >gi|70167032 adenosine deaminase, RNA-specific isoform c [Homo sapiens] Length = 1181 Score = 52.8 bits (125), Expect = 1e-06 Identities = 56/196 (28%), Positives = 84/196 (42%), Gaps = 26/196 (13%) Query: 510 KSEVCILHEYMQRVLKVRPVYNFFECENPSEP-FGASVTIDGVTYGSGTASSKKLAKNKA 568 K+ + L EY Q + + P EP F V I+G + A SKK+AK A Sbjct: 502 KNPISGLLEYAQFASQTCEFNMIEQSGPPHEPRFKFQVVINGREFPPAEAGSKKVAKQDA 561 Query: 569 ARATLEILIPDFVKQTSEEKPKDSEELEYFNHISIE---------DSRVYELTSKAGLLS 619 A + IL+ E K KDS + E +H S E + TS S Sbjct: 562 AMKAMTILL-------EEAKAKDSGKSEESSHYSTEKESEKTAESQTPTPSATSFFSGKS 614 Query: 620 PYQILHECLKRNHGMGDTSIKFEVV----PGKNQKSEYVMACGKHTVRG-WCKNKRVGKQ 674 P L EC+ H +G+ S +F ++ P K +Y +A G T +K+V KQ Sbjct: 615 PVTTLLECM---HKLGN-SCEFRLLSKEGPAHEPKFQYCVAVGAQTFPSVSAPSKKVAKQ 670 Query: 675 LASQKILQLLHPHVKN 690 +A+++ ++ LH N Sbjct: 671 MAAEEAMKALHGEATN 686 >gi|70166944 adenosine deaminase, RNA-specific isoform b [Homo sapiens] Length = 1200 Score = 52.8 bits (125), Expect = 1e-06 Identities = 56/196 (28%), Positives = 84/196 (42%), Gaps = 26/196 (13%) Query: 510 KSEVCILHEYMQRVLKVRPVYNFFECENPSEP-FGASVTIDGVTYGSGTASSKKLAKNKA 568 K+ + L EY Q + + P EP F V I+G + A SKK+AK A Sbjct: 502 KNPISGLLEYAQFASQTCEFNMIEQSGPPHEPRFKFQVVINGREFPPAEAGSKKVAKQDA 561 Query: 569 ARATLEILIPDFVKQTSEEKPKDSEELEYFNHISIE---------DSRVYELTSKAGLLS 619 A + IL+ E K KDS + E +H S E + TS S Sbjct: 562 AMKAMTILL-------EEAKAKDSGKSEESSHYSTEKESEKTAESQTPTPSATSFFSGKS 614 Query: 620 PYQILHECLKRNHGMGDTSIKFEVV----PGKNQKSEYVMACGKHTVRG-WCKNKRVGKQ 674 P L EC+ H +G+ S +F ++ P K +Y +A G T +K+V KQ Sbjct: 615 PVTTLLECM---HKLGN-SCEFRLLSKEGPAHEPKFQYCVAVGAQTFPSVSAPSKKVAKQ 670 Query: 675 LASQKILQLLHPHVKN 690 +A+++ ++ LH N Sbjct: 671 MAAEEAMKALHGEATN 686 >gi|70166852 adenosine deaminase, RNA-specific isoform a [Homo sapiens] Length = 1226 Score = 52.8 bits (125), Expect = 1e-06 Identities = 56/196 (28%), Positives = 84/196 (42%), Gaps = 26/196 (13%) Query: 510 KSEVCILHEYMQRVLKVRPVYNFFECENPSEP-FGASVTIDGVTYGSGTASSKKLAKNKA 568 K+ + L EY Q + + P EP F V I+G + A SKK+AK A Sbjct: 502 KNPISGLLEYAQFASQTCEFNMIEQSGPPHEPRFKFQVVINGREFPPAEAGSKKVAKQDA 561 Query: 569 ARATLEILIPDFVKQTSEEKPKDSEELEYFNHISIE---------DSRVYELTSKAGLLS 619 A + IL+ E K KDS + E +H S E + TS S Sbjct: 562 AMKAMTILL-------EEAKAKDSGKSEESSHYSTEKESEKTAESQTPTPSATSFFSGKS 614 Query: 620 PYQILHECLKRNHGMGDTSIKFEVV----PGKNQKSEYVMACGKHTVRG-WCKNKRVGKQ 674 P L EC+ H +G+ S +F ++ P K +Y +A G T +K+V KQ Sbjct: 615 PVTTLLECM---HKLGN-SCEFRLLSKEGPAHEPKFQYCVAVGAQTFPSVSAPSKKVAKQ 670 Query: 675 LASQKILQLLHPHVKN 690 +A+++ ++ LH N Sbjct: 671 MAAEEAMKALHGEATN 686 >gi|213417919 protein kinase, interferon-inducible double stranded RNA dependent activator isoform 3 [Homo sapiens] Length = 288 Score = 42.4 bits (98), Expect = 0.002 Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 19/97 (19%) Query: 509 GKSEVCILHEYMQRVLKVRPVYNFFECENPS-----EPFGASVTIDGVTYGSGTASSKKL 563 GK+ + +LHEY + + PVY ECE F VT+ +T +G +SKKL Sbjct: 7 GKTPIQVLHEYGMKTKNI-PVY---ECERSDVQIHVPTFTFRVTVGDITC-TGEGTSKKL 61 Query: 564 AKNKAARATLEIL---------IPDFVKQTSEEKPKD 591 AK++AA A + IL +PD + ++PK+ Sbjct: 62 AKHRAAEAAINILKANASICFAVPDPLMPDPSKQPKN 98 >gi|213417911 protein kinase, interferon-inducible double stranded RNA dependent activator isoform 2 [Homo sapiens] Length = 302 Score = 42.4 bits (98), Expect = 0.002 Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 19/97 (19%) Query: 509 GKSEVCILHEYMQRVLKVRPVYNFFECENPS-----EPFGASVTIDGVTYGSGTASSKKL 563 GK+ + +LHEY + + PVY ECE F VT+ +T +G +SKKL Sbjct: 21 GKTPIQVLHEYGMKTKNI-PVY---ECERSDVQIHVPTFTFRVTVGDITC-TGEGTSKKL 75 Query: 564 AKNKAARATLEIL---------IPDFVKQTSEEKPKD 591 AK++AA A + IL +PD + ++PK+ Sbjct: 76 AKHRAAEAAINILKANASICFAVPDPLMPDPSKQPKN 112 >gi|4505581 protein kinase, interferon-inducible double stranded RNA dependent activator isoform 1 [Homo sapiens] Length = 313 Score = 42.4 bits (98), Expect = 0.002 Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 19/97 (19%) Query: 509 GKSEVCILHEYMQRVLKVRPVYNFFECENPS-----EPFGASVTIDGVTYGSGTASSKKL 563 GK+ + +LHEY + + PVY ECE F VT+ +T +G +SKKL Sbjct: 32 GKTPIQVLHEYGMKTKNI-PVY---ECERSDVQIHVPTFTFRVTVGDITC-TGEGTSKKL 86 Query: 564 AKNKAARATLEIL---------IPDFVKQTSEEKPKD 591 AK++AA A + IL +PD + ++PK+ Sbjct: 87 AKHRAAEAAINILKANASICFAVPDPLMPDPSKQPKN 123 >gi|212276078 leucine rich repeat (in FLII) interacting protein 1 isoform 1 [Homo sapiens] Length = 640 Score = 42.0 bits (97), Expect = 0.002 Identities = 60/235 (25%), Positives = 97/235 (41%), Gaps = 19/235 (8%) Query: 63 AEDPFNFYGASLLSKGSFSKGRLLIDPNCSGHSPRTARHAPAVRKFSPDLKLLKDVKISV 122 A P Y AS+L +GSF R + AP+ ++S L Sbjct: 155 AARPSGSYRASVLDEGSFGGTR---------RGSTSGSRAPS--EYSGHLNSSSRASSRA 203 Query: 123 SFTESCRSKDRKVLYTGAERDVRAECGLLLSPVSGDVHACPFGGSVGDGVGIGGESADKK 182 S + + + E+ R GL + ++ GS + I E++ ++ Sbjct: 204 SSARASPVVEERPEKDFTEKGSRNMPGLSAATLASLGGTSSRRGSGDTSISIDTEASIRE 263 Query: 183 DEE-NEL-DQEKRVEYAVLDELEDFTDNLELDEEGAGGFTAKAIVQRDRVDEEALNFPYE 240 +E NEL DQ + VE + L++ D+L EE KA+V ++D E NF Y+ Sbjct: 264 IKELNELKDQIQDVEGKYMQGLKEMKDSLAEVEEKY----KKAMVSNAQLDNEKTNFMYQ 319 Query: 241 DDFDNDVDALLEEGLCAPKKRRTEEKYGGDSDHPSDGETSVQPMMTKIKTVLKSR 295 D D+ LEE L A +R+ EEK + + + +Q ++K LK R Sbjct: 320 VDTLKDMLLELEEQL-AESRRQYEEK-NKEFEREKHAHSILQFQFAEVKEALKQR 372 >gi|212276096 leucine rich repeat (in FLII) interacting protein 1 isoform 3 [Homo sapiens] Length = 808 Score = 41.6 bits (96), Expect = 0.003 Identities = 41/132 (31%), Positives = 65/132 (49%), Gaps = 8/132 (6%) Query: 166 GSVGDGVGIGGESADKKDEE-NEL-DQEKRVEYAVLDELEDFTDNLELDEEGAGGFTAKA 223 GS + I E++ ++ +E NEL DQ + VE + L++ D+L EE KA Sbjct: 119 GSGDTSISIDTEASIREIKELNELKDQIQDVEGKYMQGLKEMKDSLAEVEEKY----KKA 174 Query: 224 IVQRDRVDEEALNFPYEDDFDNDVDALLEEGLCAPKKRRTEEKYGGDSDHPSDGETSVQP 283 +V ++D E NF Y+ D D+ LEE L A +R+ EEK + + + +Q Sbjct: 175 MVSNAQLDNEKTNFMYQVDTLKDMLLELEEQL-AESRRQYEEK-NKEFEREKHAHSILQF 232 Query: 284 MMTKIKTVLKSR 295 ++K LK R Sbjct: 233 QFAEVKEALKQR 244 >gi|237681091 RNA-specific adenosine deaminase B1 isoform 7 [Homo sapiens] Length = 674 Score = 41.2 bits (95), Expect = 0.004 Identities = 31/92 (33%), Positives = 50/92 (54%), Gaps = 8/92 (8%) Query: 507 PNGKSEVCILHEYMQRVLKVRPVYNFFE--CENPSEPFGASVTIDGVTYGSGTASSKKLA 564 P+GK+ V IL+E L+ Y+F E+ ++ F SV +DG + G+ +KKLA Sbjct: 231 PSGKNPVMILNE-----LRPGLKYDFLSESGESHAKSFVMSVVVDGQFF-EGSGRNKKLA 284 Query: 565 KNKAARATLEILIPDFVKQTSEEKPKDSEELE 596 K +AA++ L + + QT +P SE L+ Sbjct: 285 KARAAQSALAAIFNLHLDQTPSRQPIPSEGLQ 316 >gi|7669479 RNA-specific adenosine deaminase B1 isoform 3 [Homo sapiens] Length = 714 Score = 41.2 bits (95), Expect = 0.004 Identities = 31/92 (33%), Positives = 50/92 (54%), Gaps = 8/92 (8%) Query: 507 PNGKSEVCILHEYMQRVLKVRPVYNFFE--CENPSEPFGASVTIDGVTYGSGTASSKKLA 564 P+GK+ V IL+E L+ Y+F E+ ++ F SV +DG + G+ +KKLA Sbjct: 231 PSGKNPVMILNE-----LRPGLKYDFLSESGESHAKSFVMSVVVDGQFF-EGSGRNKKLA 284 Query: 565 KNKAARATLEILIPDFVKQTSEEKPKDSEELE 596 K +AA++ L + + QT +P SE L+ Sbjct: 285 KARAAQSALAAIFNLHLDQTPSRQPIPSEGLQ 316 >gi|7669477 RNA-specific adenosine deaminase B1 isoform 2 [Homo sapiens] Length = 741 Score = 41.2 bits (95), Expect = 0.004 Identities = 31/92 (33%), Positives = 50/92 (54%), Gaps = 8/92 (8%) Query: 507 PNGKSEVCILHEYMQRVLKVRPVYNFFE--CENPSEPFGASVTIDGVTYGSGTASSKKLA 564 P+GK+ V IL+E L+ Y+F E+ ++ F SV +DG + G+ +KKLA Sbjct: 231 PSGKNPVMILNE-----LRPGLKYDFLSESGESHAKSFVMSVVVDGQFF-EGSGRNKKLA 284 Query: 565 KNKAARATLEILIPDFVKQTSEEKPKDSEELE 596 K +AA++ L + + QT +P SE L+ Sbjct: 285 KARAAQSALAAIFNLHLDQTPSRQPIPSEGLQ 316 >gi|4501919 RNA-specific adenosine deaminase B1 isoform 1 [Homo sapiens] Length = 701 Score = 41.2 bits (95), Expect = 0.004 Identities = 31/92 (33%), Positives = 50/92 (54%), Gaps = 8/92 (8%) Query: 507 PNGKSEVCILHEYMQRVLKVRPVYNFFE--CENPSEPFGASVTIDGVTYGSGTASSKKLA 564 P+GK+ V IL+E L+ Y+F E+ ++ F SV +DG + G+ +KKLA Sbjct: 231 PSGKNPVMILNE-----LRPGLKYDFLSESGESHAKSFVMSVVVDGQFF-EGSGRNKKLA 284 Query: 565 KNKAARATLEILIPDFVKQTSEEKPKDSEELE 596 K +AA++ L + + QT +P SE L+ Sbjct: 285 KARAAQSALAAIFNLHLDQTPSRQPIPSEGLQ 316 >gi|222352183 neural precursor cell expressed, developmentally down-regulated 4-like isoform 2 [Homo sapiens] Length = 854 Score = 38.9 bits (89), Expect = 0.018 Identities = 44/191 (23%), Positives = 77/191 (40%), Gaps = 23/191 (12%) Query: 266 KYGGDSDHPSDGETSVQ---PMMTKIKTVLKSRGRPPTEPLPDGWIMTFHNSGVPVYLHR 322 K GG + SD ++ ++ + + + P PLP GW N G Y++ Sbjct: 34 KNGGQDEENSDQRDDMEHGWEVVDSNDSASQHQEELPPPPLPPGWEEKVDNLGRTYYVNH 93 Query: 323 ESRVVTWSRPYFLGTGSIRKHDPPLSSIPCLHYKKMKDNEEREQSSDLTP----SGDV-S 377 +R W RP + S ++ + H + R S DL P GDV Sbjct: 94 NNRTTQWHRPSLMDVSSESDNNIRQINQEAAH---RRFRSRRHISEDLEPEPSEGGDVPE 150 Query: 378 PVKPLSRSAELEFPLDEPDSMG-ADPGPPDEKDPLGAEAAPGALG-QVKAKVEVCKDESV 435 P + +S + DS+G A P PP G+ +P L ++ ++++ D + Sbjct: 151 PWETISEEVNI-----AGDSLGLALPPPPASP---GSRTSPQELSEELSRRLQITPDSNG 202 Query: 436 DLEEFRSYLEK 446 E+F S +++ Sbjct: 203 --EQFSSLIQR 211 Score = 30.0 bits (66), Expect = 8.5 Identities = 11/31 (35%), Positives = 14/31 (45%) Query: 302 PLPDGWIMTFHNSGVPVYLHRESRVVTWSRP 332 PLP GW H G Y+ S++ W P Sbjct: 428 PLPPGWEERIHLDGRTFYIDHNSKITQWEDP 458 >gi|21361472 neural precursor cell expressed, developmentally down-regulated 4-like isoform 3 [Homo sapiens] Length = 955 Score = 38.9 bits (89), Expect = 0.018 Identities = 44/191 (23%), Positives = 77/191 (40%), Gaps = 23/191 (12%) Query: 266 KYGGDSDHPSDGETSVQ---PMMTKIKTVLKSRGRPPTEPLPDGWIMTFHNSGVPVYLHR 322 K GG + SD ++ ++ + + + P PLP GW N G Y++ Sbjct: 155 KNGGQDEENSDQRDDMEHGWEVVDSNDSASQHQEELPPPPLPPGWEEKVDNLGRTYYVNH 214 Query: 323 ESRVVTWSRPYFLGTGSIRKHDPPLSSIPCLHYKKMKDNEEREQSSDLTP----SGDV-S 377 +R W RP + S ++ + H + R S DL P GDV Sbjct: 215 NNRTTQWHRPSLMDVSSESDNNIRQINQEAAH---RRFRSRRHISEDLEPEPSEGGDVPE 271 Query: 378 PVKPLSRSAELEFPLDEPDSMG-ADPGPPDEKDPLGAEAAPGALG-QVKAKVEVCKDESV 435 P + +S + DS+G A P PP G+ +P L ++ ++++ D + Sbjct: 272 PWETISEEVNI-----AGDSLGLALPPPPASP---GSRTSPQELSEELSRRLQITPDSNG 323 Query: 436 DLEEFRSYLEK 446 E+F S +++ Sbjct: 324 --EQFSSLIQR 332 Score = 30.0 bits (66), Expect = 8.5 Identities = 11/31 (35%), Positives = 14/31 (45%) Query: 302 PLPDGWIMTFHNSGVPVYLHRESRVVTWSRP 332 PLP GW H G Y+ S++ W P Sbjct: 529 PLPPGWEERIHLDGRTFYIDHNSKITQWEDP 559 >gi|222352094 neural precursor cell expressed, developmentally down-regulated 4-like isoform 6 [Homo sapiens] Length = 834 Score = 38.9 bits (89), Expect = 0.018 Identities = 44/191 (23%), Positives = 77/191 (40%), Gaps = 23/191 (12%) Query: 266 KYGGDSDHPSDGETSVQ---PMMTKIKTVLKSRGRPPTEPLPDGWIMTFHNSGVPVYLHR 322 K GG + SD ++ ++ + + + P PLP GW N G Y++ Sbjct: 34 KNGGQDEENSDQRDDMEHGWEVVDSNDSASQHQEELPPPPLPPGWEEKVDNLGRTYYVNH 93 Query: 323 ESRVVTWSRPYFLGTGSIRKHDPPLSSIPCLHYKKMKDNEEREQSSDLTP----SGDV-S 377 +R W RP + S ++ + H + R S DL P GDV Sbjct: 94 NNRTTQWHRPSLMDVSSESDNNIRQINQEAAH---RRFRSRRHISEDLEPEPSEGGDVPE 150 Query: 378 PVKPLSRSAELEFPLDEPDSMG-ADPGPPDEKDPLGAEAAPGALG-QVKAKVEVCKDESV 435 P + +S + DS+G A P PP G+ +P L ++ ++++ D + Sbjct: 151 PWETISEEVNI-----AGDSLGLALPPPPASP---GSRTSPQELSEELSRRLQITPDSNG 202 Query: 436 DLEEFRSYLEK 446 E+F S +++ Sbjct: 203 --EQFSSLIQR 211 Score = 30.0 bits (66), Expect = 8.5 Identities = 11/31 (35%), Positives = 14/31 (45%) Query: 302 PLPDGWIMTFHNSGVPVYLHRESRVVTWSRP 332 PLP GW H G Y+ S++ W P Sbjct: 408 PLPPGWEERIHLDGRTFYIDHNSKITQWEDP 438 >gi|222352092 neural precursor cell expressed, developmentally down-regulated 4-like isoform 6 [Homo sapiens] Length = 834 Score = 38.9 bits (89), Expect = 0.018 Identities = 44/191 (23%), Positives = 77/191 (40%), Gaps = 23/191 (12%) Query: 266 KYGGDSDHPSDGETSVQ---PMMTKIKTVLKSRGRPPTEPLPDGWIMTFHNSGVPVYLHR 322 K GG + SD ++ ++ + + + P PLP GW N G Y++ Sbjct: 34 KNGGQDEENSDQRDDMEHGWEVVDSNDSASQHQEELPPPPLPPGWEEKVDNLGRTYYVNH 93 Query: 323 ESRVVTWSRPYFLGTGSIRKHDPPLSSIPCLHYKKMKDNEEREQSSDLTP----SGDV-S 377 +R W RP + S ++ + H + R S DL P GDV Sbjct: 94 NNRTTQWHRPSLMDVSSESDNNIRQINQEAAH---RRFRSRRHISEDLEPEPSEGGDVPE 150 Query: 378 PVKPLSRSAELEFPLDEPDSMG-ADPGPPDEKDPLGAEAAPGALG-QVKAKVEVCKDESV 435 P + +S + DS+G A P PP G+ +P L ++ ++++ D + Sbjct: 151 PWETISEEVNI-----AGDSLGLALPPPPASP---GSRTSPQELSEELSRRLQITPDSNG 202 Query: 436 DLEEFRSYLEK 446 E+F S +++ Sbjct: 203 --EQFSSLIQR 211 Score = 30.0 bits (66), Expect = 8.5 Identities = 11/31 (35%), Positives = 14/31 (45%) Query: 302 PLPDGWIMTFHNSGVPVYLHRESRVVTWSRP 332 PLP GW H G Y+ S++ W P Sbjct: 408 PLPPGWEERIHLDGRTFYIDHNSKITQWEDP 438 >gi|222352090 neural precursor cell expressed, developmentally down-regulated 4-like isoform 5 [Homo sapiens] Length = 947 Score = 38.9 bits (89), Expect = 0.018 Identities = 44/191 (23%), Positives = 77/191 (40%), Gaps = 23/191 (12%) Query: 266 KYGGDSDHPSDGETSVQ---PMMTKIKTVLKSRGRPPTEPLPDGWIMTFHNSGVPVYLHR 322 K GG + SD ++ ++ + + + P PLP GW N G Y++ Sbjct: 147 KNGGQDEENSDQRDDMEHGWEVVDSNDSASQHQEELPPPPLPPGWEEKVDNLGRTYYVNH 206 Query: 323 ESRVVTWSRPYFLGTGSIRKHDPPLSSIPCLHYKKMKDNEEREQSSDLTP----SGDV-S 377 +R W RP + S ++ + H + R S DL P GDV Sbjct: 207 NNRTTQWHRPSLMDVSSESDNNIRQINQEAAH---RRFRSRRHISEDLEPEPSEGGDVPE 263 Query: 378 PVKPLSRSAELEFPLDEPDSMG-ADPGPPDEKDPLGAEAAPGALG-QVKAKVEVCKDESV 435 P + +S + DS+G A P PP G+ +P L ++ ++++ D + Sbjct: 264 PWETISEEVNI-----AGDSLGLALPPPPASP---GSRTSPQELSEELSRRLQITPDSNG 315 Query: 436 DLEEFRSYLEK 446 E+F S +++ Sbjct: 316 --EQFSSLIQR 324 Score = 30.0 bits (66), Expect = 8.5 Identities = 11/31 (35%), Positives = 14/31 (45%) Query: 302 PLPDGWIMTFHNSGVPVYLHRESRVVTWSRP 332 PLP GW H G Y+ S++ W P Sbjct: 521 PLPPGWEERIHLDGRTFYIDHNSKITQWEDP 551 >gi|222352088 neural precursor cell expressed, developmentally down-regulated 4-like isoform 4 [Homo sapiens] Length = 967 Score = 38.9 bits (89), Expect = 0.018 Identities = 44/191 (23%), Positives = 77/191 (40%), Gaps = 23/191 (12%) Query: 266 KYGGDSDHPSDGETSVQ---PMMTKIKTVLKSRGRPPTEPLPDGWIMTFHNSGVPVYLHR 322 K GG + SD ++ ++ + + + P PLP GW N G Y++ Sbjct: 147 KNGGQDEENSDQRDDMEHGWEVVDSNDSASQHQEELPPPPLPPGWEEKVDNLGRTYYVNH 206 Query: 323 ESRVVTWSRPYFLGTGSIRKHDPPLSSIPCLHYKKMKDNEEREQSSDLTP----SGDV-S 377 +R W RP + S ++ + H + R S DL P GDV Sbjct: 207 NNRTTQWHRPSLMDVSSESDNNIRQINQEAAH---RRFRSRRHISEDLEPEPSEGGDVPE 263 Query: 378 PVKPLSRSAELEFPLDEPDSMG-ADPGPPDEKDPLGAEAAPGALG-QVKAKVEVCKDESV 435 P + +S + DS+G A P PP G+ +P L ++ ++++ D + Sbjct: 264 PWETISEEVNI-----AGDSLGLALPPPPASP---GSRTSPQELSEELSRRLQITPDSNG 315 Query: 436 DLEEFRSYLEK 446 E+F S +++ Sbjct: 316 --EQFSSLIQR 324 Score = 30.0 bits (66), Expect = 8.5 Identities = 11/31 (35%), Positives = 14/31 (45%) Query: 302 PLPDGWIMTFHNSGVPVYLHRESRVVTWSRP 332 PLP GW H G Y+ S++ W P Sbjct: 541 PLPPGWEERIHLDGRTFYIDHNSKITQWEDP 571 >gi|222352086 neural precursor cell expressed, developmentally down-regulated 4-like isoform 1 [Homo sapiens] Length = 975 Score = 38.9 bits (89), Expect = 0.018 Identities = 44/191 (23%), Positives = 77/191 (40%), Gaps = 23/191 (12%) Query: 266 KYGGDSDHPSDGETSVQ---PMMTKIKTVLKSRGRPPTEPLPDGWIMTFHNSGVPVYLHR 322 K GG + SD ++ ++ + + + P PLP GW N G Y++ Sbjct: 155 KNGGQDEENSDQRDDMEHGWEVVDSNDSASQHQEELPPPPLPPGWEEKVDNLGRTYYVNH 214 Query: 323 ESRVVTWSRPYFLGTGSIRKHDPPLSSIPCLHYKKMKDNEEREQSSDLTP----SGDV-S 377 +R W RP + S ++ + H + R S DL P GDV Sbjct: 215 NNRTTQWHRPSLMDVSSESDNNIRQINQEAAH---RRFRSRRHISEDLEPEPSEGGDVPE 271 Query: 378 PVKPLSRSAELEFPLDEPDSMG-ADPGPPDEKDPLGAEAAPGALG-QVKAKVEVCKDESV 435 P + +S + DS+G A P PP G+ +P L ++ ++++ D + Sbjct: 272 PWETISEEVNI-----AGDSLGLALPPPPASP---GSRTSPQELSEELSRRLQITPDSNG 323 Query: 436 DLEEFRSYLEK 446 E+F S +++ Sbjct: 324 --EQFSSLIQR 332 Score = 30.0 bits (66), Expect = 8.5 Identities = 11/31 (35%), Positives = 14/31 (45%) Query: 302 PLPDGWIMTFHNSGVPVYLHRESRVVTWSRP 332 PLP GW H G Y+ S++ W P Sbjct: 549 PLPPGWEERIHLDGRTFYIDHNSKITQWEDP 579 >gi|222352084 neural precursor cell expressed, developmentally down-regulated 4-like isoform 2 [Homo sapiens] Length = 854 Score = 38.9 bits (89), Expect = 0.018 Identities = 44/191 (23%), Positives = 77/191 (40%), Gaps = 23/191 (12%) Query: 266 KYGGDSDHPSDGETSVQ---PMMTKIKTVLKSRGRPPTEPLPDGWIMTFHNSGVPVYLHR 322 K GG + SD ++ ++ + + + P PLP GW N G Y++ Sbjct: 34 KNGGQDEENSDQRDDMEHGWEVVDSNDSASQHQEELPPPPLPPGWEEKVDNLGRTYYVNH 93 Query: 323 ESRVVTWSRPYFLGTGSIRKHDPPLSSIPCLHYKKMKDNEEREQSSDLTP----SGDV-S 377 +R W RP + S ++ + H + R S DL P GDV Sbjct: 94 NNRTTQWHRPSLMDVSSESDNNIRQINQEAAH---RRFRSRRHISEDLEPEPSEGGDVPE 150 Query: 378 PVKPLSRSAELEFPLDEPDSMG-ADPGPPDEKDPLGAEAAPGALG-QVKAKVEVCKDESV 435 P + +S + DS+G A P PP G+ +P L ++ ++++ D + Sbjct: 151 PWETISEEVNI-----AGDSLGLALPPPPASP---GSRTSPQELSEELSRRLQITPDSNG 202 Query: 436 DLEEFRSYLEK 446 E+F S +++ Sbjct: 203 --EQFSSLIQR 211 Score = 30.0 bits (66), Expect = 8.5 Identities = 11/31 (35%), Positives = 14/31 (45%) Query: 302 PLPDGWIMTFHNSGVPVYLHRESRVVTWSRP 332 PLP GW H G Y+ S++ W P Sbjct: 428 PLPPGWEERIHLDGRTFYIDHNSKITQWEDP 458 >gi|222352082 neural precursor cell expressed, developmentally down-regulated 4-like isoform 2 [Homo sapiens] Length = 854 Score = 38.9 bits (89), Expect = 0.018 Identities = 44/191 (23%), Positives = 77/191 (40%), Gaps = 23/191 (12%) Query: 266 KYGGDSDHPSDGETSVQ---PMMTKIKTVLKSRGRPPTEPLPDGWIMTFHNSGVPVYLHR 322 K GG + SD ++ ++ + + + P PLP GW N G Y++ Sbjct: 34 KNGGQDEENSDQRDDMEHGWEVVDSNDSASQHQEELPPPPLPPGWEEKVDNLGRTYYVNH 93 Query: 323 ESRVVTWSRPYFLGTGSIRKHDPPLSSIPCLHYKKMKDNEEREQSSDLTP----SGDV-S 377 +R W RP + S ++ + H + R S DL P GDV Sbjct: 94 NNRTTQWHRPSLMDVSSESDNNIRQINQEAAH---RRFRSRRHISEDLEPEPSEGGDVPE 150 Query: 378 PVKPLSRSAELEFPLDEPDSMG-ADPGPPDEKDPLGAEAAPGALG-QVKAKVEVCKDESV 435 P + +S + DS+G A P PP G+ +P L ++ ++++ D + Sbjct: 151 PWETISEEVNI-----AGDSLGLALPPPPASP---GSRTSPQELSEELSRRLQITPDSNG 202 Query: 436 DLEEFRSYLEK 446 E+F S +++ Sbjct: 203 --EQFSSLIQR 211 Score = 30.0 bits (66), Expect = 8.5 Identities = 11/31 (35%), Positives = 14/31 (45%) Query: 302 PLPDGWIMTFHNSGVPVYLHRESRVVTWSRP 332 PLP GW H G Y+ S++ W P Sbjct: 428 PLPPGWEERIHLDGRTFYIDHNSKITQWEDP 458 >gi|19743840 TAR RNA binding protein 2 isoform a [Homo sapiens] Length = 366 Score = 38.9 bits (89), Expect = 0.018 Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 9/102 (8%) Query: 498 PTKKEFVINPNGKSEVCILHEYMQRVLKVRPVYNFFECENPSEP--FGASVTIDGVTYGS 555 P+ ++ + GK+ + +L EY R+ K PVY+ + E + F VT+ G T + Sbjct: 17 PSIEQMLAANPGKTPISLLQEYGTRIGKT-PVYDLLKAEGQAHQPNFTFRVTV-GDTSCT 74 Query: 556 GTASSKKLAKNKAARATLEIL-----IPDFVKQTSEEKPKDS 592 G SKK AK+KAA L+ L + ++ +S P DS Sbjct: 75 GQGPSKKAAKHKAAEVALKHLKGGSMLEPALEDSSSFSPLDS 116 >gi|19743838 TAR RNA binding protein 2 isoform b [Homo sapiens] Length = 345 Score = 38.5 bits (88), Expect = 0.024 Identities = 33/94 (35%), Positives = 48/94 (51%), Gaps = 10/94 (10%) Query: 506 NPNGKSEVCILHEYMQRVLKVRPVYNFFECENPSEP--FGASVTIDGVTYGSGTASSKKL 563 NP GK+ + +L EY R+ K PVY+ + E + F VT+ G T +G SKK Sbjct: 5 NP-GKTPISLLQEYGTRIGKT-PVYDLLKAEGQAHQPNFTFRVTV-GDTSCTGQGPSKKA 61 Query: 564 AKNKAARATLEIL-----IPDFVKQTSEEKPKDS 592 AK+KAA L+ L + ++ +S P DS Sbjct: 62 AKHKAAEVALKHLKGGSMLEPALEDSSSFSPLDS 95 >gi|85068512 TAR RNA binding protein 2 isoform b [Homo sapiens] Length = 345 Score = 38.5 bits (88), Expect = 0.024 Identities = 33/94 (35%), Positives = 48/94 (51%), Gaps = 10/94 (10%) Query: 506 NPNGKSEVCILHEYMQRVLKVRPVYNFFECENPSEP--FGASVTIDGVTYGSGTASSKKL 563 NP GK+ + +L EY R+ K PVY+ + E + F VT+ G T +G SKK Sbjct: 5 NP-GKTPISLLQEYGTRIGKT-PVYDLLKAEGQAHQPNFTFRVTV-GDTSCTGQGPSKKA 61 Query: 564 AKNKAARATLEIL-----IPDFVKQTSEEKPKDS 592 AK+KAA L+ L + ++ +S P DS Sbjct: 62 AKHKAAEVALKHLKGGSMLEPALEDSSSFSPLDS 95 >gi|5454088 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Homo sapiens] Length = 251 Score = 38.5 bits (88), Expect = 0.024 Identities = 33/102 (32%), Positives = 47/102 (46%), Gaps = 15/102 (14%) Query: 170 DGVGIGGESADKKDEENELDQEKRVEYAVLDELEDFTDNLELDEEGAGGFTAKAIVQRDR 229 DGV E + +DEE+E D++ E DE +D +++E DE+ D Sbjct: 163 DGVDEEEEDEEGEDEEDEDDEDGEEE--EFDEEDDEDEDVEGDEDD------------DE 208 Query: 230 VDEEALNFPY-EDDFDNDVDALLEEGLCAPKKRRTEEKYGGD 270 V EE F E+D D D D EEG K++R + G D Sbjct: 209 VSEEEEEFGLDEEDEDEDEDEEEEEGGKGEKRKRETDDEGED 250 >gi|239756368 PREDICTED: similar to acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Homo sapiens] Length = 272 Score = 37.7 bits (86), Expect = 0.041 Identities = 33/97 (34%), Positives = 46/97 (47%), Gaps = 21/97 (21%) Query: 177 ESADKKDEENELDQEKRVEYAVLDELEDFTDNLELDEEGAGGFTAKAIVQRDRVDEEALN 236 E D+KD ENE +E+ LDE ED +++E D++ +D V EE Sbjct: 193 EGEDEKDXENEDGEEEE-----LDEEEDEDEDVEGDDD------------KDEVSEEEEE 235 Query: 237 FPY---EDDFDNDVDALLEE-GLCAPKKRRTEEKYGG 269 F EDD D D D EE G +KR T+++ G Sbjct: 236 FGLDKDEDDEDEDEDEEEEESGKGENRKRETDDEEDG 272 >gi|239750893 PREDICTED: similar to acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Homo sapiens] Length = 272 Score = 37.7 bits (86), Expect = 0.041 Identities = 33/97 (34%), Positives = 46/97 (47%), Gaps = 21/97 (21%) Query: 177 ESADKKDEENELDQEKRVEYAVLDELEDFTDNLELDEEGAGGFTAKAIVQRDRVDEEALN 236 E D+KD ENE +E+ LDE ED +++E D++ +D V EE Sbjct: 193 EGEDEKDXENEDGEEEE-----LDEEEDEDEDVEGDDD------------KDEVSEEEEE 235 Query: 237 FPY---EDDFDNDVDALLEE-GLCAPKKRRTEEKYGG 269 F EDD D D D EE G +KR T+++ G Sbjct: 236 FGLDKDEDDEDEDEDEEEEESGKGENRKRETDDEEDG 272 >gi|5453682 hexamethylene bis-acetamide inducible 1 [Homo sapiens] Length = 359 Score = 37.0 bits (84), Expect = 0.070 Identities = 28/88 (31%), Positives = 39/88 (44%), Gaps = 8/88 (9%) Query: 331 RPYFLGTGSIRKHDPPLSSIPCLHYKKMKDNEEREQSSDLTPSGDVSPVKPLSRSAELEF 390 RP G GS+ PPL + C +++ E+ + D + GD P AE+E Sbjct: 58 RPGPEGEGSLESQPPPLQTQACPESSCLREGEKGQNGDDSSAGGDFPP------PAEVE- 110 Query: 391 PLDEPDSMGADPGPPDEKDPLGAEAAPG 418 P E + + A P E LGA AA G Sbjct: 111 PTPEAELL-AQPCHDSEASKLGAPAAGG 137 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.312 0.132 0.384 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 33,654,693 Number of Sequences: 37866 Number of extensions: 1765927 Number of successful extensions: 8424 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 48 Number of HSP's successfully gapped in prelim test: 117 Number of HSP's that attempted gapping in prelim test: 7999 Number of HSP's gapped (non-prelim): 536 length of query: 773 length of database: 18,247,518 effective HSP length: 110 effective length of query: 663 effective length of database: 14,082,258 effective search space: 9336537054 effective search space used: 9336537054 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.8 bits) S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.