Guide to the Human Genome
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Search of human proteins with 38488720

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|38488720 DiGeorge syndrome critical region gene 8 [Homo
sapiens]
         (773 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|38488720 DiGeorge syndrome critical region gene 8 [Homo sapiens]  1564   0.0  
gi|70167113 adenosine deaminase, RNA-specific isoform d [Homo sa...    53   1e-06
gi|70167032 adenosine deaminase, RNA-specific isoform c [Homo sa...    53   1e-06
gi|70166944 adenosine deaminase, RNA-specific isoform b [Homo sa...    53   1e-06
gi|70166852 adenosine deaminase, RNA-specific isoform a [Homo sa...    53   1e-06
gi|213417919 protein kinase, interferon-inducible double strande...    42   0.002
gi|213417911 protein kinase, interferon-inducible double strande...    42   0.002
gi|4505581 protein kinase, interferon-inducible double stranded ...    42   0.002
gi|212276078 leucine rich repeat (in FLII) interacting protein 1...    42   0.002
gi|212276096 leucine rich repeat (in FLII) interacting protein 1...    42   0.003
gi|237681091 RNA-specific adenosine deaminase B1 isoform 7 [Homo...    41   0.004
gi|7669479 RNA-specific adenosine deaminase B1 isoform 3 [Homo s...    41   0.004
gi|7669477 RNA-specific adenosine deaminase B1 isoform 2 [Homo s...    41   0.004
gi|4501919 RNA-specific adenosine deaminase B1 isoform 1 [Homo s...    41   0.004
gi|222352183 neural precursor cell expressed, developmentally do...    39   0.018
gi|21361472 neural precursor cell expressed, developmentally dow...    39   0.018
gi|222352094 neural precursor cell expressed, developmentally do...    39   0.018
gi|222352092 neural precursor cell expressed, developmentally do...    39   0.018
gi|222352090 neural precursor cell expressed, developmentally do...    39   0.018
gi|222352088 neural precursor cell expressed, developmentally do...    39   0.018
gi|222352086 neural precursor cell expressed, developmentally do...    39   0.018
gi|222352084 neural precursor cell expressed, developmentally do...    39   0.018
gi|222352082 neural precursor cell expressed, developmentally do...    39   0.018
gi|19743840 TAR RNA binding protein 2 isoform a [Homo sapiens]         39   0.018
gi|19743838 TAR RNA binding protein 2 isoform b [Homo sapiens]         39   0.024
gi|85068512 TAR RNA binding protein 2 isoform b [Homo sapiens]         39   0.024
gi|5454088 acidic (leucine-rich) nuclear phosphoprotein 32 famil...    39   0.024
gi|239756368 PREDICTED: similar to acidic (leucine-rich) nuclear...    38   0.041
gi|239750893 PREDICTED: similar to acidic (leucine-rich) nuclear...    38   0.041
gi|5453682 hexamethylene bis-acetamide inducible 1 [Homo sapiens]      37   0.070

>gi|38488720 DiGeorge syndrome critical region gene 8 [Homo sapiens]
          Length = 773

 Score = 1564 bits (4050), Expect = 0.0
 Identities = 773/773 (100%), Positives = 773/773 (100%)

Query: 1   METDESPSPLPCGPAGEAVMESRARPFQALPREQSPPPPLQTSSGAEVMDVGSGGDGQSE 60
           METDESPSPLPCGPAGEAVMESRARPFQALPREQSPPPPLQTSSGAEVMDVGSGGDGQSE
Sbjct: 1   METDESPSPLPCGPAGEAVMESRARPFQALPREQSPPPPLQTSSGAEVMDVGSGGDGQSE 60

Query: 61  LPAEDPFNFYGASLLSKGSFSKGRLLIDPNCSGHSPRTARHAPAVRKFSPDLKLLKDVKI 120
           LPAEDPFNFYGASLLSKGSFSKGRLLIDPNCSGHSPRTARHAPAVRKFSPDLKLLKDVKI
Sbjct: 61  LPAEDPFNFYGASLLSKGSFSKGRLLIDPNCSGHSPRTARHAPAVRKFSPDLKLLKDVKI 120

Query: 121 SVSFTESCRSKDRKVLYTGAERDVRAECGLLLSPVSGDVHACPFGGSVGDGVGIGGESAD 180
           SVSFTESCRSKDRKVLYTGAERDVRAECGLLLSPVSGDVHACPFGGSVGDGVGIGGESAD
Sbjct: 121 SVSFTESCRSKDRKVLYTGAERDVRAECGLLLSPVSGDVHACPFGGSVGDGVGIGGESAD 180

Query: 181 KKDEENELDQEKRVEYAVLDELEDFTDNLELDEEGAGGFTAKAIVQRDRVDEEALNFPYE 240
           KKDEENELDQEKRVEYAVLDELEDFTDNLELDEEGAGGFTAKAIVQRDRVDEEALNFPYE
Sbjct: 181 KKDEENELDQEKRVEYAVLDELEDFTDNLELDEEGAGGFTAKAIVQRDRVDEEALNFPYE 240

Query: 241 DDFDNDVDALLEEGLCAPKKRRTEEKYGGDSDHPSDGETSVQPMMTKIKTVLKSRGRPPT 300
           DDFDNDVDALLEEGLCAPKKRRTEEKYGGDSDHPSDGETSVQPMMTKIKTVLKSRGRPPT
Sbjct: 241 DDFDNDVDALLEEGLCAPKKRRTEEKYGGDSDHPSDGETSVQPMMTKIKTVLKSRGRPPT 300

Query: 301 EPLPDGWIMTFHNSGVPVYLHRESRVVTWSRPYFLGTGSIRKHDPPLSSIPCLHYKKMKD 360
           EPLPDGWIMTFHNSGVPVYLHRESRVVTWSRPYFLGTGSIRKHDPPLSSIPCLHYKKMKD
Sbjct: 301 EPLPDGWIMTFHNSGVPVYLHRESRVVTWSRPYFLGTGSIRKHDPPLSSIPCLHYKKMKD 360

Query: 361 NEEREQSSDLTPSGDVSPVKPLSRSAELEFPLDEPDSMGADPGPPDEKDPLGAEAAPGAL 420
           NEEREQSSDLTPSGDVSPVKPLSRSAELEFPLDEPDSMGADPGPPDEKDPLGAEAAPGAL
Sbjct: 361 NEEREQSSDLTPSGDVSPVKPLSRSAELEFPLDEPDSMGADPGPPDEKDPLGAEAAPGAL 420

Query: 421 GQVKAKVEVCKDESVDLEEFRSYLEKRFDFEQVTVKKFRTWAERRQFNREMKRKQAESER 480
           GQVKAKVEVCKDESVDLEEFRSYLEKRFDFEQVTVKKFRTWAERRQFNREMKRKQAESER
Sbjct: 421 GQVKAKVEVCKDESVDLEEFRSYLEKRFDFEQVTVKKFRTWAERRQFNREMKRKQAESER 480

Query: 481 PILPANQKLITLSVQDAPTKKEFVINPNGKSEVCILHEYMQRVLKVRPVYNFFECENPSE 540
           PILPANQKLITLSVQDAPTKKEFVINPNGKSEVCILHEYMQRVLKVRPVYNFFECENPSE
Sbjct: 481 PILPANQKLITLSVQDAPTKKEFVINPNGKSEVCILHEYMQRVLKVRPVYNFFECENPSE 540

Query: 541 PFGASVTIDGVTYGSGTASSKKLAKNKAARATLEILIPDFVKQTSEEKPKDSEELEYFNH 600
           PFGASVTIDGVTYGSGTASSKKLAKNKAARATLEILIPDFVKQTSEEKPKDSEELEYFNH
Sbjct: 541 PFGASVTIDGVTYGSGTASSKKLAKNKAARATLEILIPDFVKQTSEEKPKDSEELEYFNH 600

Query: 601 ISIEDSRVYELTSKAGLLSPYQILHECLKRNHGMGDTSIKFEVVPGKNQKSEYVMACGKH 660
           ISIEDSRVYELTSKAGLLSPYQILHECLKRNHGMGDTSIKFEVVPGKNQKSEYVMACGKH
Sbjct: 601 ISIEDSRVYELTSKAGLLSPYQILHECLKRNHGMGDTSIKFEVVPGKNQKSEYVMACGKH 660

Query: 661 TVRGWCKNKRVGKQLASQKILQLLHPHVKNWGSLLRMYGRESSKMVKQETSDKSVIELQQ 720
           TVRGWCKNKRVGKQLASQKILQLLHPHVKNWGSLLRMYGRESSKMVKQETSDKSVIELQQ
Sbjct: 661 TVRGWCKNKRVGKQLASQKILQLLHPHVKNWGSLLRMYGRESSKMVKQETSDKSVIELQQ 720

Query: 721 YAKKNKPNLHILSKLQEEMKRLAEEREETRKKPKMSIVASAQPGGEPLCTVDV 773
           YAKKNKPNLHILSKLQEEMKRLAEEREETRKKPKMSIVASAQPGGEPLCTVDV
Sbjct: 721 YAKKNKPNLHILSKLQEEMKRLAEEREETRKKPKMSIVASAQPGGEPLCTVDV 773


>gi|70167113 adenosine deaminase, RNA-specific isoform d [Homo
           sapiens]
          Length = 931

 Score = 52.8 bits (125), Expect = 1e-06
 Identities = 56/196 (28%), Positives = 84/196 (42%), Gaps = 26/196 (13%)

Query: 510 KSEVCILHEYMQRVLKVRPVYNFFECENPSEP-FGASVTIDGVTYGSGTASSKKLAKNKA 568
           K+ +  L EY Q   +        +   P EP F   V I+G  +    A SKK+AK  A
Sbjct: 207 KNPISGLLEYAQFASQTCEFNMIEQSGPPHEPRFKFQVVINGREFPPAEAGSKKVAKQDA 266

Query: 569 ARATLEILIPDFVKQTSEEKPKDSEELEYFNHISIE---------DSRVYELTSKAGLLS 619
           A   + IL+        E K KDS + E  +H S E          +     TS     S
Sbjct: 267 AMKAMTILL-------EEAKAKDSGKSEESSHYSTEKESEKTAESQTPTPSATSFFSGKS 319

Query: 620 PYQILHECLKRNHGMGDTSIKFEVV----PGKNQKSEYVMACGKHTVRG-WCKNKRVGKQ 674
           P   L EC+   H +G+ S +F ++    P    K +Y +A G  T       +K+V KQ
Sbjct: 320 PVTTLLECM---HKLGN-SCEFRLLSKEGPAHEPKFQYCVAVGAQTFPSVSAPSKKVAKQ 375

Query: 675 LASQKILQLLHPHVKN 690
           +A+++ ++ LH    N
Sbjct: 376 MAAEEAMKALHGEATN 391


>gi|70167032 adenosine deaminase, RNA-specific isoform c [Homo
           sapiens]
          Length = 1181

 Score = 52.8 bits (125), Expect = 1e-06
 Identities = 56/196 (28%), Positives = 84/196 (42%), Gaps = 26/196 (13%)

Query: 510 KSEVCILHEYMQRVLKVRPVYNFFECENPSEP-FGASVTIDGVTYGSGTASSKKLAKNKA 568
           K+ +  L EY Q   +        +   P EP F   V I+G  +    A SKK+AK  A
Sbjct: 502 KNPISGLLEYAQFASQTCEFNMIEQSGPPHEPRFKFQVVINGREFPPAEAGSKKVAKQDA 561

Query: 569 ARATLEILIPDFVKQTSEEKPKDSEELEYFNHISIE---------DSRVYELTSKAGLLS 619
           A   + IL+        E K KDS + E  +H S E          +     TS     S
Sbjct: 562 AMKAMTILL-------EEAKAKDSGKSEESSHYSTEKESEKTAESQTPTPSATSFFSGKS 614

Query: 620 PYQILHECLKRNHGMGDTSIKFEVV----PGKNQKSEYVMACGKHTVRG-WCKNKRVGKQ 674
           P   L EC+   H +G+ S +F ++    P    K +Y +A G  T       +K+V KQ
Sbjct: 615 PVTTLLECM---HKLGN-SCEFRLLSKEGPAHEPKFQYCVAVGAQTFPSVSAPSKKVAKQ 670

Query: 675 LASQKILQLLHPHVKN 690
           +A+++ ++ LH    N
Sbjct: 671 MAAEEAMKALHGEATN 686


>gi|70166944 adenosine deaminase, RNA-specific isoform b [Homo
           sapiens]
          Length = 1200

 Score = 52.8 bits (125), Expect = 1e-06
 Identities = 56/196 (28%), Positives = 84/196 (42%), Gaps = 26/196 (13%)

Query: 510 KSEVCILHEYMQRVLKVRPVYNFFECENPSEP-FGASVTIDGVTYGSGTASSKKLAKNKA 568
           K+ +  L EY Q   +        +   P EP F   V I+G  +    A SKK+AK  A
Sbjct: 502 KNPISGLLEYAQFASQTCEFNMIEQSGPPHEPRFKFQVVINGREFPPAEAGSKKVAKQDA 561

Query: 569 ARATLEILIPDFVKQTSEEKPKDSEELEYFNHISIE---------DSRVYELTSKAGLLS 619
           A   + IL+        E K KDS + E  +H S E          +     TS     S
Sbjct: 562 AMKAMTILL-------EEAKAKDSGKSEESSHYSTEKESEKTAESQTPTPSATSFFSGKS 614

Query: 620 PYQILHECLKRNHGMGDTSIKFEVV----PGKNQKSEYVMACGKHTVRG-WCKNKRVGKQ 674
           P   L EC+   H +G+ S +F ++    P    K +Y +A G  T       +K+V KQ
Sbjct: 615 PVTTLLECM---HKLGN-SCEFRLLSKEGPAHEPKFQYCVAVGAQTFPSVSAPSKKVAKQ 670

Query: 675 LASQKILQLLHPHVKN 690
           +A+++ ++ LH    N
Sbjct: 671 MAAEEAMKALHGEATN 686


>gi|70166852 adenosine deaminase, RNA-specific isoform a [Homo
           sapiens]
          Length = 1226

 Score = 52.8 bits (125), Expect = 1e-06
 Identities = 56/196 (28%), Positives = 84/196 (42%), Gaps = 26/196 (13%)

Query: 510 KSEVCILHEYMQRVLKVRPVYNFFECENPSEP-FGASVTIDGVTYGSGTASSKKLAKNKA 568
           K+ +  L EY Q   +        +   P EP F   V I+G  +    A SKK+AK  A
Sbjct: 502 KNPISGLLEYAQFASQTCEFNMIEQSGPPHEPRFKFQVVINGREFPPAEAGSKKVAKQDA 561

Query: 569 ARATLEILIPDFVKQTSEEKPKDSEELEYFNHISIE---------DSRVYELTSKAGLLS 619
           A   + IL+        E K KDS + E  +H S E          +     TS     S
Sbjct: 562 AMKAMTILL-------EEAKAKDSGKSEESSHYSTEKESEKTAESQTPTPSATSFFSGKS 614

Query: 620 PYQILHECLKRNHGMGDTSIKFEVV----PGKNQKSEYVMACGKHTVRG-WCKNKRVGKQ 674
           P   L EC+   H +G+ S +F ++    P    K +Y +A G  T       +K+V KQ
Sbjct: 615 PVTTLLECM---HKLGN-SCEFRLLSKEGPAHEPKFQYCVAVGAQTFPSVSAPSKKVAKQ 670

Query: 675 LASQKILQLLHPHVKN 690
           +A+++ ++ LH    N
Sbjct: 671 MAAEEAMKALHGEATN 686


>gi|213417919 protein kinase, interferon-inducible double stranded
           RNA dependent activator isoform 3 [Homo sapiens]
          Length = 288

 Score = 42.4 bits (98), Expect = 0.002
 Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 19/97 (19%)

Query: 509 GKSEVCILHEYMQRVLKVRPVYNFFECENPS-----EPFGASVTIDGVTYGSGTASSKKL 563
           GK+ + +LHEY  +   + PVY   ECE          F   VT+  +T  +G  +SKKL
Sbjct: 7   GKTPIQVLHEYGMKTKNI-PVY---ECERSDVQIHVPTFTFRVTVGDITC-TGEGTSKKL 61

Query: 564 AKNKAARATLEIL---------IPDFVKQTSEEKPKD 591
           AK++AA A + IL         +PD +     ++PK+
Sbjct: 62  AKHRAAEAAINILKANASICFAVPDPLMPDPSKQPKN 98


>gi|213417911 protein kinase, interferon-inducible double stranded
           RNA dependent activator isoform 2 [Homo sapiens]
          Length = 302

 Score = 42.4 bits (98), Expect = 0.002
 Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 19/97 (19%)

Query: 509 GKSEVCILHEYMQRVLKVRPVYNFFECENPS-----EPFGASVTIDGVTYGSGTASSKKL 563
           GK+ + +LHEY  +   + PVY   ECE          F   VT+  +T  +G  +SKKL
Sbjct: 21  GKTPIQVLHEYGMKTKNI-PVY---ECERSDVQIHVPTFTFRVTVGDITC-TGEGTSKKL 75

Query: 564 AKNKAARATLEIL---------IPDFVKQTSEEKPKD 591
           AK++AA A + IL         +PD +     ++PK+
Sbjct: 76  AKHRAAEAAINILKANASICFAVPDPLMPDPSKQPKN 112


>gi|4505581 protein kinase, interferon-inducible double stranded RNA
           dependent activator isoform 1 [Homo sapiens]
          Length = 313

 Score = 42.4 bits (98), Expect = 0.002
 Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 19/97 (19%)

Query: 509 GKSEVCILHEYMQRVLKVRPVYNFFECENPS-----EPFGASVTIDGVTYGSGTASSKKL 563
           GK+ + +LHEY  +   + PVY   ECE          F   VT+  +T  +G  +SKKL
Sbjct: 32  GKTPIQVLHEYGMKTKNI-PVY---ECERSDVQIHVPTFTFRVTVGDITC-TGEGTSKKL 86

Query: 564 AKNKAARATLEIL---------IPDFVKQTSEEKPKD 591
           AK++AA A + IL         +PD +     ++PK+
Sbjct: 87  AKHRAAEAAINILKANASICFAVPDPLMPDPSKQPKN 123


>gi|212276078 leucine rich repeat (in FLII) interacting protein 1
           isoform 1 [Homo sapiens]
          Length = 640

 Score = 42.0 bits (97), Expect = 0.002
 Identities = 60/235 (25%), Positives = 97/235 (41%), Gaps = 19/235 (8%)

Query: 63  AEDPFNFYGASLLSKGSFSKGRLLIDPNCSGHSPRTARHAPAVRKFSPDLKLLKDVKISV 122
           A  P   Y AS+L +GSF   R             +   AP+  ++S  L          
Sbjct: 155 AARPSGSYRASVLDEGSFGGTR---------RGSTSGSRAPS--EYSGHLNSSSRASSRA 203

Query: 123 SFTESCRSKDRKVLYTGAERDVRAECGLLLSPVSGDVHACPFGGSVGDGVGIGGESADKK 182
           S   +    + +      E+  R   GL  + ++         GS    + I  E++ ++
Sbjct: 204 SSARASPVVEERPEKDFTEKGSRNMPGLSAATLASLGGTSSRRGSGDTSISIDTEASIRE 263

Query: 183 DEE-NEL-DQEKRVEYAVLDELEDFTDNLELDEEGAGGFTAKAIVQRDRVDEEALNFPYE 240
            +E NEL DQ + VE   +  L++  D+L   EE       KA+V   ++D E  NF Y+
Sbjct: 264 IKELNELKDQIQDVEGKYMQGLKEMKDSLAEVEEKY----KKAMVSNAQLDNEKTNFMYQ 319

Query: 241 DDFDNDVDALLEEGLCAPKKRRTEEKYGGDSDHPSDGETSVQPMMTKIKTVLKSR 295
            D   D+   LEE L A  +R+ EEK   + +      + +Q    ++K  LK R
Sbjct: 320 VDTLKDMLLELEEQL-AESRRQYEEK-NKEFEREKHAHSILQFQFAEVKEALKQR 372


>gi|212276096 leucine rich repeat (in FLII) interacting protein 1
           isoform 3 [Homo sapiens]
          Length = 808

 Score = 41.6 bits (96), Expect = 0.003
 Identities = 41/132 (31%), Positives = 65/132 (49%), Gaps = 8/132 (6%)

Query: 166 GSVGDGVGIGGESADKKDEE-NEL-DQEKRVEYAVLDELEDFTDNLELDEEGAGGFTAKA 223
           GS    + I  E++ ++ +E NEL DQ + VE   +  L++  D+L   EE       KA
Sbjct: 119 GSGDTSISIDTEASIREIKELNELKDQIQDVEGKYMQGLKEMKDSLAEVEEKY----KKA 174

Query: 224 IVQRDRVDEEALNFPYEDDFDNDVDALLEEGLCAPKKRRTEEKYGGDSDHPSDGETSVQP 283
           +V   ++D E  NF Y+ D   D+   LEE L A  +R+ EEK   + +      + +Q 
Sbjct: 175 MVSNAQLDNEKTNFMYQVDTLKDMLLELEEQL-AESRRQYEEK-NKEFEREKHAHSILQF 232

Query: 284 MMTKIKTVLKSR 295
              ++K  LK R
Sbjct: 233 QFAEVKEALKQR 244


>gi|237681091 RNA-specific adenosine deaminase B1 isoform 7 [Homo
           sapiens]
          Length = 674

 Score = 41.2 bits (95), Expect = 0.004
 Identities = 31/92 (33%), Positives = 50/92 (54%), Gaps = 8/92 (8%)

Query: 507 PNGKSEVCILHEYMQRVLKVRPVYNFFE--CENPSEPFGASVTIDGVTYGSGTASSKKLA 564
           P+GK+ V IL+E     L+    Y+F     E+ ++ F  SV +DG  +  G+  +KKLA
Sbjct: 231 PSGKNPVMILNE-----LRPGLKYDFLSESGESHAKSFVMSVVVDGQFF-EGSGRNKKLA 284

Query: 565 KNKAARATLEILIPDFVKQTSEEKPKDSEELE 596
           K +AA++ L  +    + QT   +P  SE L+
Sbjct: 285 KARAAQSALAAIFNLHLDQTPSRQPIPSEGLQ 316


>gi|7669479 RNA-specific adenosine deaminase B1 isoform 3 [Homo
           sapiens]
          Length = 714

 Score = 41.2 bits (95), Expect = 0.004
 Identities = 31/92 (33%), Positives = 50/92 (54%), Gaps = 8/92 (8%)

Query: 507 PNGKSEVCILHEYMQRVLKVRPVYNFFE--CENPSEPFGASVTIDGVTYGSGTASSKKLA 564
           P+GK+ V IL+E     L+    Y+F     E+ ++ F  SV +DG  +  G+  +KKLA
Sbjct: 231 PSGKNPVMILNE-----LRPGLKYDFLSESGESHAKSFVMSVVVDGQFF-EGSGRNKKLA 284

Query: 565 KNKAARATLEILIPDFVKQTSEEKPKDSEELE 596
           K +AA++ L  +    + QT   +P  SE L+
Sbjct: 285 KARAAQSALAAIFNLHLDQTPSRQPIPSEGLQ 316


>gi|7669477 RNA-specific adenosine deaminase B1 isoform 2 [Homo
           sapiens]
          Length = 741

 Score = 41.2 bits (95), Expect = 0.004
 Identities = 31/92 (33%), Positives = 50/92 (54%), Gaps = 8/92 (8%)

Query: 507 PNGKSEVCILHEYMQRVLKVRPVYNFFE--CENPSEPFGASVTIDGVTYGSGTASSKKLA 564
           P+GK+ V IL+E     L+    Y+F     E+ ++ F  SV +DG  +  G+  +KKLA
Sbjct: 231 PSGKNPVMILNE-----LRPGLKYDFLSESGESHAKSFVMSVVVDGQFF-EGSGRNKKLA 284

Query: 565 KNKAARATLEILIPDFVKQTSEEKPKDSEELE 596
           K +AA++ L  +    + QT   +P  SE L+
Sbjct: 285 KARAAQSALAAIFNLHLDQTPSRQPIPSEGLQ 316


>gi|4501919 RNA-specific adenosine deaminase B1 isoform 1 [Homo
           sapiens]
          Length = 701

 Score = 41.2 bits (95), Expect = 0.004
 Identities = 31/92 (33%), Positives = 50/92 (54%), Gaps = 8/92 (8%)

Query: 507 PNGKSEVCILHEYMQRVLKVRPVYNFFE--CENPSEPFGASVTIDGVTYGSGTASSKKLA 564
           P+GK+ V IL+E     L+    Y+F     E+ ++ F  SV +DG  +  G+  +KKLA
Sbjct: 231 PSGKNPVMILNE-----LRPGLKYDFLSESGESHAKSFVMSVVVDGQFF-EGSGRNKKLA 284

Query: 565 KNKAARATLEILIPDFVKQTSEEKPKDSEELE 596
           K +AA++ L  +    + QT   +P  SE L+
Sbjct: 285 KARAAQSALAAIFNLHLDQTPSRQPIPSEGLQ 316


>gi|222352183 neural precursor cell expressed, developmentally
           down-regulated 4-like isoform 2 [Homo sapiens]
          Length = 854

 Score = 38.9 bits (89), Expect = 0.018
 Identities = 44/191 (23%), Positives = 77/191 (40%), Gaps = 23/191 (12%)

Query: 266 KYGGDSDHPSDGETSVQ---PMMTKIKTVLKSRGRPPTEPLPDGWIMTFHNSGVPVYLHR 322
           K GG  +  SD    ++    ++    +  + +   P  PLP GW     N G   Y++ 
Sbjct: 34  KNGGQDEENSDQRDDMEHGWEVVDSNDSASQHQEELPPPPLPPGWEEKVDNLGRTYYVNH 93

Query: 323 ESRVVTWSRPYFLGTGSIRKHDPPLSSIPCLHYKKMKDNEEREQSSDLTP----SGDV-S 377
            +R   W RP  +   S   ++    +    H    +    R  S DL P     GDV  
Sbjct: 94  NNRTTQWHRPSLMDVSSESDNNIRQINQEAAH---RRFRSRRHISEDLEPEPSEGGDVPE 150

Query: 378 PVKPLSRSAELEFPLDEPDSMG-ADPGPPDEKDPLGAEAAPGALG-QVKAKVEVCKDESV 435
           P + +S    +       DS+G A P PP      G+  +P  L  ++  ++++  D + 
Sbjct: 151 PWETISEEVNI-----AGDSLGLALPPPPASP---GSRTSPQELSEELSRRLQITPDSNG 202

Query: 436 DLEEFRSYLEK 446
             E+F S +++
Sbjct: 203 --EQFSSLIQR 211



 Score = 30.0 bits (66), Expect = 8.5
 Identities = 11/31 (35%), Positives = 14/31 (45%)

Query: 302 PLPDGWIMTFHNSGVPVYLHRESRVVTWSRP 332
           PLP GW    H  G   Y+   S++  W  P
Sbjct: 428 PLPPGWEERIHLDGRTFYIDHNSKITQWEDP 458


>gi|21361472 neural precursor cell expressed, developmentally
           down-regulated 4-like isoform 3 [Homo sapiens]
          Length = 955

 Score = 38.9 bits (89), Expect = 0.018
 Identities = 44/191 (23%), Positives = 77/191 (40%), Gaps = 23/191 (12%)

Query: 266 KYGGDSDHPSDGETSVQ---PMMTKIKTVLKSRGRPPTEPLPDGWIMTFHNSGVPVYLHR 322
           K GG  +  SD    ++    ++    +  + +   P  PLP GW     N G   Y++ 
Sbjct: 155 KNGGQDEENSDQRDDMEHGWEVVDSNDSASQHQEELPPPPLPPGWEEKVDNLGRTYYVNH 214

Query: 323 ESRVVTWSRPYFLGTGSIRKHDPPLSSIPCLHYKKMKDNEEREQSSDLTP----SGDV-S 377
            +R   W RP  +   S   ++    +    H    +    R  S DL P     GDV  
Sbjct: 215 NNRTTQWHRPSLMDVSSESDNNIRQINQEAAH---RRFRSRRHISEDLEPEPSEGGDVPE 271

Query: 378 PVKPLSRSAELEFPLDEPDSMG-ADPGPPDEKDPLGAEAAPGALG-QVKAKVEVCKDESV 435
           P + +S    +       DS+G A P PP      G+  +P  L  ++  ++++  D + 
Sbjct: 272 PWETISEEVNI-----AGDSLGLALPPPPASP---GSRTSPQELSEELSRRLQITPDSNG 323

Query: 436 DLEEFRSYLEK 446
             E+F S +++
Sbjct: 324 --EQFSSLIQR 332



 Score = 30.0 bits (66), Expect = 8.5
 Identities = 11/31 (35%), Positives = 14/31 (45%)

Query: 302 PLPDGWIMTFHNSGVPVYLHRESRVVTWSRP 332
           PLP GW    H  G   Y+   S++  W  P
Sbjct: 529 PLPPGWEERIHLDGRTFYIDHNSKITQWEDP 559


>gi|222352094 neural precursor cell expressed, developmentally
           down-regulated 4-like isoform 6 [Homo sapiens]
          Length = 834

 Score = 38.9 bits (89), Expect = 0.018
 Identities = 44/191 (23%), Positives = 77/191 (40%), Gaps = 23/191 (12%)

Query: 266 KYGGDSDHPSDGETSVQ---PMMTKIKTVLKSRGRPPTEPLPDGWIMTFHNSGVPVYLHR 322
           K GG  +  SD    ++    ++    +  + +   P  PLP GW     N G   Y++ 
Sbjct: 34  KNGGQDEENSDQRDDMEHGWEVVDSNDSASQHQEELPPPPLPPGWEEKVDNLGRTYYVNH 93

Query: 323 ESRVVTWSRPYFLGTGSIRKHDPPLSSIPCLHYKKMKDNEEREQSSDLTP----SGDV-S 377
            +R   W RP  +   S   ++    +    H    +    R  S DL P     GDV  
Sbjct: 94  NNRTTQWHRPSLMDVSSESDNNIRQINQEAAH---RRFRSRRHISEDLEPEPSEGGDVPE 150

Query: 378 PVKPLSRSAELEFPLDEPDSMG-ADPGPPDEKDPLGAEAAPGALG-QVKAKVEVCKDESV 435
           P + +S    +       DS+G A P PP      G+  +P  L  ++  ++++  D + 
Sbjct: 151 PWETISEEVNI-----AGDSLGLALPPPPASP---GSRTSPQELSEELSRRLQITPDSNG 202

Query: 436 DLEEFRSYLEK 446
             E+F S +++
Sbjct: 203 --EQFSSLIQR 211



 Score = 30.0 bits (66), Expect = 8.5
 Identities = 11/31 (35%), Positives = 14/31 (45%)

Query: 302 PLPDGWIMTFHNSGVPVYLHRESRVVTWSRP 332
           PLP GW    H  G   Y+   S++  W  P
Sbjct: 408 PLPPGWEERIHLDGRTFYIDHNSKITQWEDP 438


>gi|222352092 neural precursor cell expressed, developmentally
           down-regulated 4-like isoform 6 [Homo sapiens]
          Length = 834

 Score = 38.9 bits (89), Expect = 0.018
 Identities = 44/191 (23%), Positives = 77/191 (40%), Gaps = 23/191 (12%)

Query: 266 KYGGDSDHPSDGETSVQ---PMMTKIKTVLKSRGRPPTEPLPDGWIMTFHNSGVPVYLHR 322
           K GG  +  SD    ++    ++    +  + +   P  PLP GW     N G   Y++ 
Sbjct: 34  KNGGQDEENSDQRDDMEHGWEVVDSNDSASQHQEELPPPPLPPGWEEKVDNLGRTYYVNH 93

Query: 323 ESRVVTWSRPYFLGTGSIRKHDPPLSSIPCLHYKKMKDNEEREQSSDLTP----SGDV-S 377
            +R   W RP  +   S   ++    +    H    +    R  S DL P     GDV  
Sbjct: 94  NNRTTQWHRPSLMDVSSESDNNIRQINQEAAH---RRFRSRRHISEDLEPEPSEGGDVPE 150

Query: 378 PVKPLSRSAELEFPLDEPDSMG-ADPGPPDEKDPLGAEAAPGALG-QVKAKVEVCKDESV 435
           P + +S    +       DS+G A P PP      G+  +P  L  ++  ++++  D + 
Sbjct: 151 PWETISEEVNI-----AGDSLGLALPPPPASP---GSRTSPQELSEELSRRLQITPDSNG 202

Query: 436 DLEEFRSYLEK 446
             E+F S +++
Sbjct: 203 --EQFSSLIQR 211



 Score = 30.0 bits (66), Expect = 8.5
 Identities = 11/31 (35%), Positives = 14/31 (45%)

Query: 302 PLPDGWIMTFHNSGVPVYLHRESRVVTWSRP 332
           PLP GW    H  G   Y+   S++  W  P
Sbjct: 408 PLPPGWEERIHLDGRTFYIDHNSKITQWEDP 438


>gi|222352090 neural precursor cell expressed, developmentally
           down-regulated 4-like isoform 5 [Homo sapiens]
          Length = 947

 Score = 38.9 bits (89), Expect = 0.018
 Identities = 44/191 (23%), Positives = 77/191 (40%), Gaps = 23/191 (12%)

Query: 266 KYGGDSDHPSDGETSVQ---PMMTKIKTVLKSRGRPPTEPLPDGWIMTFHNSGVPVYLHR 322
           K GG  +  SD    ++    ++    +  + +   P  PLP GW     N G   Y++ 
Sbjct: 147 KNGGQDEENSDQRDDMEHGWEVVDSNDSASQHQEELPPPPLPPGWEEKVDNLGRTYYVNH 206

Query: 323 ESRVVTWSRPYFLGTGSIRKHDPPLSSIPCLHYKKMKDNEEREQSSDLTP----SGDV-S 377
            +R   W RP  +   S   ++    +    H    +    R  S DL P     GDV  
Sbjct: 207 NNRTTQWHRPSLMDVSSESDNNIRQINQEAAH---RRFRSRRHISEDLEPEPSEGGDVPE 263

Query: 378 PVKPLSRSAELEFPLDEPDSMG-ADPGPPDEKDPLGAEAAPGALG-QVKAKVEVCKDESV 435
           P + +S    +       DS+G A P PP      G+  +P  L  ++  ++++  D + 
Sbjct: 264 PWETISEEVNI-----AGDSLGLALPPPPASP---GSRTSPQELSEELSRRLQITPDSNG 315

Query: 436 DLEEFRSYLEK 446
             E+F S +++
Sbjct: 316 --EQFSSLIQR 324



 Score = 30.0 bits (66), Expect = 8.5
 Identities = 11/31 (35%), Positives = 14/31 (45%)

Query: 302 PLPDGWIMTFHNSGVPVYLHRESRVVTWSRP 332
           PLP GW    H  G   Y+   S++  W  P
Sbjct: 521 PLPPGWEERIHLDGRTFYIDHNSKITQWEDP 551


>gi|222352088 neural precursor cell expressed, developmentally
           down-regulated 4-like isoform 4 [Homo sapiens]
          Length = 967

 Score = 38.9 bits (89), Expect = 0.018
 Identities = 44/191 (23%), Positives = 77/191 (40%), Gaps = 23/191 (12%)

Query: 266 KYGGDSDHPSDGETSVQ---PMMTKIKTVLKSRGRPPTEPLPDGWIMTFHNSGVPVYLHR 322
           K GG  +  SD    ++    ++    +  + +   P  PLP GW     N G   Y++ 
Sbjct: 147 KNGGQDEENSDQRDDMEHGWEVVDSNDSASQHQEELPPPPLPPGWEEKVDNLGRTYYVNH 206

Query: 323 ESRVVTWSRPYFLGTGSIRKHDPPLSSIPCLHYKKMKDNEEREQSSDLTP----SGDV-S 377
            +R   W RP  +   S   ++    +    H    +    R  S DL P     GDV  
Sbjct: 207 NNRTTQWHRPSLMDVSSESDNNIRQINQEAAH---RRFRSRRHISEDLEPEPSEGGDVPE 263

Query: 378 PVKPLSRSAELEFPLDEPDSMG-ADPGPPDEKDPLGAEAAPGALG-QVKAKVEVCKDESV 435
           P + +S    +       DS+G A P PP      G+  +P  L  ++  ++++  D + 
Sbjct: 264 PWETISEEVNI-----AGDSLGLALPPPPASP---GSRTSPQELSEELSRRLQITPDSNG 315

Query: 436 DLEEFRSYLEK 446
             E+F S +++
Sbjct: 316 --EQFSSLIQR 324



 Score = 30.0 bits (66), Expect = 8.5
 Identities = 11/31 (35%), Positives = 14/31 (45%)

Query: 302 PLPDGWIMTFHNSGVPVYLHRESRVVTWSRP 332
           PLP GW    H  G   Y+   S++  W  P
Sbjct: 541 PLPPGWEERIHLDGRTFYIDHNSKITQWEDP 571


>gi|222352086 neural precursor cell expressed, developmentally
           down-regulated 4-like isoform 1 [Homo sapiens]
          Length = 975

 Score = 38.9 bits (89), Expect = 0.018
 Identities = 44/191 (23%), Positives = 77/191 (40%), Gaps = 23/191 (12%)

Query: 266 KYGGDSDHPSDGETSVQ---PMMTKIKTVLKSRGRPPTEPLPDGWIMTFHNSGVPVYLHR 322
           K GG  +  SD    ++    ++    +  + +   P  PLP GW     N G   Y++ 
Sbjct: 155 KNGGQDEENSDQRDDMEHGWEVVDSNDSASQHQEELPPPPLPPGWEEKVDNLGRTYYVNH 214

Query: 323 ESRVVTWSRPYFLGTGSIRKHDPPLSSIPCLHYKKMKDNEEREQSSDLTP----SGDV-S 377
            +R   W RP  +   S   ++    +    H    +    R  S DL P     GDV  
Sbjct: 215 NNRTTQWHRPSLMDVSSESDNNIRQINQEAAH---RRFRSRRHISEDLEPEPSEGGDVPE 271

Query: 378 PVKPLSRSAELEFPLDEPDSMG-ADPGPPDEKDPLGAEAAPGALG-QVKAKVEVCKDESV 435
           P + +S    +       DS+G A P PP      G+  +P  L  ++  ++++  D + 
Sbjct: 272 PWETISEEVNI-----AGDSLGLALPPPPASP---GSRTSPQELSEELSRRLQITPDSNG 323

Query: 436 DLEEFRSYLEK 446
             E+F S +++
Sbjct: 324 --EQFSSLIQR 332



 Score = 30.0 bits (66), Expect = 8.5
 Identities = 11/31 (35%), Positives = 14/31 (45%)

Query: 302 PLPDGWIMTFHNSGVPVYLHRESRVVTWSRP 332
           PLP GW    H  G   Y+   S++  W  P
Sbjct: 549 PLPPGWEERIHLDGRTFYIDHNSKITQWEDP 579


>gi|222352084 neural precursor cell expressed, developmentally
           down-regulated 4-like isoform 2 [Homo sapiens]
          Length = 854

 Score = 38.9 bits (89), Expect = 0.018
 Identities = 44/191 (23%), Positives = 77/191 (40%), Gaps = 23/191 (12%)

Query: 266 KYGGDSDHPSDGETSVQ---PMMTKIKTVLKSRGRPPTEPLPDGWIMTFHNSGVPVYLHR 322
           K GG  +  SD    ++    ++    +  + +   P  PLP GW     N G   Y++ 
Sbjct: 34  KNGGQDEENSDQRDDMEHGWEVVDSNDSASQHQEELPPPPLPPGWEEKVDNLGRTYYVNH 93

Query: 323 ESRVVTWSRPYFLGTGSIRKHDPPLSSIPCLHYKKMKDNEEREQSSDLTP----SGDV-S 377
            +R   W RP  +   S   ++    +    H    +    R  S DL P     GDV  
Sbjct: 94  NNRTTQWHRPSLMDVSSESDNNIRQINQEAAH---RRFRSRRHISEDLEPEPSEGGDVPE 150

Query: 378 PVKPLSRSAELEFPLDEPDSMG-ADPGPPDEKDPLGAEAAPGALG-QVKAKVEVCKDESV 435
           P + +S    +       DS+G A P PP      G+  +P  L  ++  ++++  D + 
Sbjct: 151 PWETISEEVNI-----AGDSLGLALPPPPASP---GSRTSPQELSEELSRRLQITPDSNG 202

Query: 436 DLEEFRSYLEK 446
             E+F S +++
Sbjct: 203 --EQFSSLIQR 211



 Score = 30.0 bits (66), Expect = 8.5
 Identities = 11/31 (35%), Positives = 14/31 (45%)

Query: 302 PLPDGWIMTFHNSGVPVYLHRESRVVTWSRP 332
           PLP GW    H  G   Y+   S++  W  P
Sbjct: 428 PLPPGWEERIHLDGRTFYIDHNSKITQWEDP 458


>gi|222352082 neural precursor cell expressed, developmentally
           down-regulated 4-like isoform 2 [Homo sapiens]
          Length = 854

 Score = 38.9 bits (89), Expect = 0.018
 Identities = 44/191 (23%), Positives = 77/191 (40%), Gaps = 23/191 (12%)

Query: 266 KYGGDSDHPSDGETSVQ---PMMTKIKTVLKSRGRPPTEPLPDGWIMTFHNSGVPVYLHR 322
           K GG  +  SD    ++    ++    +  + +   P  PLP GW     N G   Y++ 
Sbjct: 34  KNGGQDEENSDQRDDMEHGWEVVDSNDSASQHQEELPPPPLPPGWEEKVDNLGRTYYVNH 93

Query: 323 ESRVVTWSRPYFLGTGSIRKHDPPLSSIPCLHYKKMKDNEEREQSSDLTP----SGDV-S 377
            +R   W RP  +   S   ++    +    H    +    R  S DL P     GDV  
Sbjct: 94  NNRTTQWHRPSLMDVSSESDNNIRQINQEAAH---RRFRSRRHISEDLEPEPSEGGDVPE 150

Query: 378 PVKPLSRSAELEFPLDEPDSMG-ADPGPPDEKDPLGAEAAPGALG-QVKAKVEVCKDESV 435
           P + +S    +       DS+G A P PP      G+  +P  L  ++  ++++  D + 
Sbjct: 151 PWETISEEVNI-----AGDSLGLALPPPPASP---GSRTSPQELSEELSRRLQITPDSNG 202

Query: 436 DLEEFRSYLEK 446
             E+F S +++
Sbjct: 203 --EQFSSLIQR 211



 Score = 30.0 bits (66), Expect = 8.5
 Identities = 11/31 (35%), Positives = 14/31 (45%)

Query: 302 PLPDGWIMTFHNSGVPVYLHRESRVVTWSRP 332
           PLP GW    H  G   Y+   S++  W  P
Sbjct: 428 PLPPGWEERIHLDGRTFYIDHNSKITQWEDP 458


>gi|19743840 TAR RNA binding protein 2 isoform a [Homo sapiens]
          Length = 366

 Score = 38.9 bits (89), Expect = 0.018
 Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 9/102 (8%)

Query: 498 PTKKEFVINPNGKSEVCILHEYMQRVLKVRPVYNFFECENPSEP--FGASVTIDGVTYGS 555
           P+ ++ +    GK+ + +L EY  R+ K  PVY+  + E  +    F   VT+ G T  +
Sbjct: 17  PSIEQMLAANPGKTPISLLQEYGTRIGKT-PVYDLLKAEGQAHQPNFTFRVTV-GDTSCT 74

Query: 556 GTASSKKLAKNKAARATLEIL-----IPDFVKQTSEEKPKDS 592
           G   SKK AK+KAA   L+ L     +   ++ +S   P DS
Sbjct: 75  GQGPSKKAAKHKAAEVALKHLKGGSMLEPALEDSSSFSPLDS 116


>gi|19743838 TAR RNA binding protein 2 isoform b [Homo sapiens]
          Length = 345

 Score = 38.5 bits (88), Expect = 0.024
 Identities = 33/94 (35%), Positives = 48/94 (51%), Gaps = 10/94 (10%)

Query: 506 NPNGKSEVCILHEYMQRVLKVRPVYNFFECENPSEP--FGASVTIDGVTYGSGTASSKKL 563
           NP GK+ + +L EY  R+ K  PVY+  + E  +    F   VT+ G T  +G   SKK 
Sbjct: 5   NP-GKTPISLLQEYGTRIGKT-PVYDLLKAEGQAHQPNFTFRVTV-GDTSCTGQGPSKKA 61

Query: 564 AKNKAARATLEIL-----IPDFVKQTSEEKPKDS 592
           AK+KAA   L+ L     +   ++ +S   P DS
Sbjct: 62  AKHKAAEVALKHLKGGSMLEPALEDSSSFSPLDS 95


>gi|85068512 TAR RNA binding protein 2 isoform b [Homo sapiens]
          Length = 345

 Score = 38.5 bits (88), Expect = 0.024
 Identities = 33/94 (35%), Positives = 48/94 (51%), Gaps = 10/94 (10%)

Query: 506 NPNGKSEVCILHEYMQRVLKVRPVYNFFECENPSEP--FGASVTIDGVTYGSGTASSKKL 563
           NP GK+ + +L EY  R+ K  PVY+  + E  +    F   VT+ G T  +G   SKK 
Sbjct: 5   NP-GKTPISLLQEYGTRIGKT-PVYDLLKAEGQAHQPNFTFRVTV-GDTSCTGQGPSKKA 61

Query: 564 AKNKAARATLEIL-----IPDFVKQTSEEKPKDS 592
           AK+KAA   L+ L     +   ++ +S   P DS
Sbjct: 62  AKHKAAEVALKHLKGGSMLEPALEDSSSFSPLDS 95


>gi|5454088 acidic (leucine-rich) nuclear phosphoprotein 32 family,
           member B [Homo sapiens]
          Length = 251

 Score = 38.5 bits (88), Expect = 0.024
 Identities = 33/102 (32%), Positives = 47/102 (46%), Gaps = 15/102 (14%)

Query: 170 DGVGIGGESADKKDEENELDQEKRVEYAVLDELEDFTDNLELDEEGAGGFTAKAIVQRDR 229
           DGV    E  + +DEE+E D++   E    DE +D  +++E DE+             D 
Sbjct: 163 DGVDEEEEDEEGEDEEDEDDEDGEEE--EFDEEDDEDEDVEGDEDD------------DE 208

Query: 230 VDEEALNFPY-EDDFDNDVDALLEEGLCAPKKRRTEEKYGGD 270
           V EE   F   E+D D D D   EEG    K++R  +  G D
Sbjct: 209 VSEEEEEFGLDEEDEDEDEDEEEEEGGKGEKRKRETDDEGED 250


>gi|239756368 PREDICTED: similar to acidic (leucine-rich) nuclear
           phosphoprotein 32 family, member B [Homo sapiens]
          Length = 272

 Score = 37.7 bits (86), Expect = 0.041
 Identities = 33/97 (34%), Positives = 46/97 (47%), Gaps = 21/97 (21%)

Query: 177 ESADKKDEENELDQEKRVEYAVLDELEDFTDNLELDEEGAGGFTAKAIVQRDRVDEEALN 236
           E  D+KD ENE  +E+      LDE ED  +++E D++            +D V EE   
Sbjct: 193 EGEDEKDXENEDGEEEE-----LDEEEDEDEDVEGDDD------------KDEVSEEEEE 235

Query: 237 FPY---EDDFDNDVDALLEE-GLCAPKKRRTEEKYGG 269
           F     EDD D D D   EE G    +KR T+++  G
Sbjct: 236 FGLDKDEDDEDEDEDEEEEESGKGENRKRETDDEEDG 272


>gi|239750893 PREDICTED: similar to acidic (leucine-rich) nuclear
           phosphoprotein 32 family, member B [Homo sapiens]
          Length = 272

 Score = 37.7 bits (86), Expect = 0.041
 Identities = 33/97 (34%), Positives = 46/97 (47%), Gaps = 21/97 (21%)

Query: 177 ESADKKDEENELDQEKRVEYAVLDELEDFTDNLELDEEGAGGFTAKAIVQRDRVDEEALN 236
           E  D+KD ENE  +E+      LDE ED  +++E D++            +D V EE   
Sbjct: 193 EGEDEKDXENEDGEEEE-----LDEEEDEDEDVEGDDD------------KDEVSEEEEE 235

Query: 237 FPY---EDDFDNDVDALLEE-GLCAPKKRRTEEKYGG 269
           F     EDD D D D   EE G    +KR T+++  G
Sbjct: 236 FGLDKDEDDEDEDEDEEEEESGKGENRKRETDDEEDG 272


>gi|5453682 hexamethylene bis-acetamide inducible 1 [Homo sapiens]
          Length = 359

 Score = 37.0 bits (84), Expect = 0.070
 Identities = 28/88 (31%), Positives = 39/88 (44%), Gaps = 8/88 (9%)

Query: 331 RPYFLGTGSIRKHDPPLSSIPCLHYKKMKDNEEREQSSDLTPSGDVSPVKPLSRSAELEF 390
           RP   G GS+    PPL +  C     +++ E+ +   D +  GD  P       AE+E 
Sbjct: 58  RPGPEGEGSLESQPPPLQTQACPESSCLREGEKGQNGDDSSAGGDFPP------PAEVE- 110

Query: 391 PLDEPDSMGADPGPPDEKDPLGAEAAPG 418
           P  E + + A P    E   LGA AA G
Sbjct: 111 PTPEAELL-AQPCHDSEASKLGAPAAGG 137


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.312    0.132    0.384 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,654,693
Number of Sequences: 37866
Number of extensions: 1765927
Number of successful extensions: 8424
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 117
Number of HSP's that attempted gapping in prelim test: 7999
Number of HSP's gapped (non-prelim): 536
length of query: 773
length of database: 18,247,518
effective HSP length: 110
effective length of query: 663
effective length of database: 14,082,258
effective search space: 9336537054
effective search space used: 9336537054
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 66 (30.0 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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