Search of human proteins with 38348398

Search of human proteins with 38348398

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|38348398 lipoma HMGIC fusion partner-like 4 [Homo sapiens]
         (247 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|38348398 lipoma HMGIC fusion partner-like 4 [Homo sapiens]         513   e-146
gi|39752685 lipoma HMGIC fusion partner-like 3 [Homo sapiens]         362   e-100
gi|32698930 lipoma HMGIC fusion partner-like 5 [Homo sapiens]         295   3e-80
gi|5031865 lipoma HMGIC fusion partner [Homo sapiens]                  89   4e-18
gi|32698676 lipoma HMGIC fusion partner-like 2 [Homo sapiens]          82   6e-16
gi|30039704 lipoma HMGIC fusion partner-like 1 [Homo sapiens]          74   2e-13
gi|48717249 transmembrane protein 211 [Homo sapiens]                   44   2e-04
gi|4505907 peripheral myelin protein 22 [Homo sapiens]                 33   0.23 
gi|24430165 peripheral myelin protein 22 [Homo sapiens]                33   0.23 
gi|24430163 peripheral myelin protein 22 [Homo sapiens]                33   0.23 
gi|4503561 epithelial membrane protein 2 [Homo sapiens]                30   1.9  
gi|40805843 K(lysine) acetyltransferase 2B [Homo sapiens]              30   2.5  
gi|98986325 dual oxidase activator 2 [Homo sapiens]                    29   4.3  
gi|51092270 hypothetical protein LOC375057 [Homo sapiens]              28   5.6  
gi|228008400 synaptotagmin binding, cytoplasmic RNA interacting ...    28   7.4  
gi|228008398 synaptotagmin binding, cytoplasmic RNA interacting ...    28   7.4  
gi|228008396 synaptotagmin binding, cytoplasmic RNA interacting ...    28   7.4  
gi|228008295 synaptotagmin binding, cytoplasmic RNA interacting ...    28   7.4  
gi|228008293 synaptotagmin binding, cytoplasmic RNA interacting ...    28   7.4  
gi|228008291 synaptotagmin binding, cytoplasmic RNA interacting ...    28   7.4  
gi|122937267 lemur tyrosine kinase 3 [Homo sapiens]                    28   7.4  

>gi|38348398 lipoma HMGIC fusion partner-like 4 [Homo sapiens]
          Length = 247

 Score =  513 bits (1320), Expect = e-146
 Identities = 247/247 (100%), Positives = 247/247 (100%)

Query: 1   MLPSQEASKLYHEHYMRNSRAIGVLWAIFTICFAIINVVVFIQPYWVGDSVSTPKPGYFG 60
           MLPSQEASKLYHEHYMRNSRAIGVLWAIFTICFAIINVVVFIQPYWVGDSVSTPKPGYFG
Sbjct: 1   MLPSQEASKLYHEHYMRNSRAIGVLWAIFTICFAIINVVVFIQPYWVGDSVSTPKPGYFG 60

Query: 61  LFHYCVGSGLAGRELTCRGSFTDFSTIPSSAFKAAAFFVLLSMVLILGCITCFSLFFFCN 120
           LFHYCVGSGLAGRELTCRGSFTDFSTIPSSAFKAAAFFVLLSMVLILGCITCFSLFFFCN
Sbjct: 61  LFHYCVGSGLAGRELTCRGSFTDFSTIPSSAFKAAAFFVLLSMVLILGCITCFSLFFFCN 120

Query: 121 TATVYKICAWMQLLAALCLVLGCMIFPDGWDAETIRDMCGAKTGKYSLGDCSVRWAYILA 180
           TATVYKICAWMQLLAALCLVLGCMIFPDGWDAETIRDMCGAKTGKYSLGDCSVRWAYILA
Sbjct: 121 TATVYKICAWMQLLAALCLVLGCMIFPDGWDAETIRDMCGAKTGKYSLGDCSVRWAYILA 180

Query: 181 IIGILNALILSFLAFVLGNRQTDLLQEELKPENKDFVGSTVSSVLRPGGDVSGWGVLPCP 240
           IIGILNALILSFLAFVLGNRQTDLLQEELKPENKDFVGSTVSSVLRPGGDVSGWGVLPCP
Sbjct: 181 IIGILNALILSFLAFVLGNRQTDLLQEELKPENKDFVGSTVSSVLRPGGDVSGWGVLPCP 240

Query: 241 VAHSQGP 247
           VAHSQGP
Sbjct: 241 VAHSQGP 247


>gi|39752685 lipoma HMGIC fusion partner-like 3 [Homo sapiens]
          Length = 236

 Score =  362 bits (929), Expect = e-100
 Identities = 168/214 (78%), Positives = 192/214 (89%), Gaps = 1/214 (0%)

Query: 1   MLPSQEASKLYHEHYMRNSRAIGVLWAIFTICFAIINVVVFIQPYWVGDSVSTPKPGYFG 60
           MLP+QEA+KLYH +Y+RNSRAIGVLWAIFTICFAI+NVV FIQPYW+GD V TP+ GYFG
Sbjct: 15  MLPAQEAAKLYHTNYVRNSRAIGVLWAIFTICFAIVNVVCFIQPYWIGDGVDTPQAGYFG 74

Query: 61  LFHYCVGSGLAGRELTCRGSFTDFSTIPSSAFKAAAFFVLLSMVLILGCITCFSLFFFCN 120
           LFHYC+G+G + RELTCRGSFTDFST+PS AFKAA+FF+ LSM+LI+ CI CF+LFFFCN
Sbjct: 75  LFHYCIGNGFS-RELTCRGSFTDFSTLPSGAFKAASFFIGLSMMLIIACIICFTLFFFCN 133

Query: 121 TATVYKICAWMQLLAALCLVLGCMIFPDGWDAETIRDMCGAKTGKYSLGDCSVRWAYILA 180
           TATVYKICAWMQL +A CLVLGCMIFPDGWD++ ++ MCG KT KY+LG CSVRWAYILA
Sbjct: 134 TATVYKICAWMQLTSAACLVLGCMIFPDGWDSDEVKRMCGEKTDKYTLGACSVRWAYILA 193

Query: 181 IIGILNALILSFLAFVLGNRQTDLLQEELKPENK 214
           IIGIL+ALILSFLAFVLGNRQ  L+ EELK ENK
Sbjct: 194 IIGILDALILSFLAFVLGNRQDSLMAEELKAENK 227


>gi|32698930 lipoma HMGIC fusion partner-like 5 [Homo sapiens]
          Length = 219

 Score =  295 bits (754), Expect = 3e-80
 Identities = 134/217 (61%), Positives = 174/217 (80%), Gaps = 1/217 (0%)

Query: 1   MLPSQEASKLYHEHYMRNSRAIGVLWAIFTICFAIINVVVFIQPYWVGDSVSTPKPGYFG 60
           +LP+QEA+K+YH +Y+RNSRA+GV+W   TICF+++ + +FIQPYW+GDSV+TP+ GYFG
Sbjct: 4   LLPAQEAAKIYHTNYVRNSRAVGVMWGTLTICFSVLVMALFIQPYWIGDSVNTPQAGYFG 63

Query: 61  LFHYCVGSGLAGRELTCRGSFTDFSTIPSSAFKAAAFFVLLSMVLILGCITCFSLFFFCN 120
           LF YCVG+ L+  EL C+G   DFS+IPS AFK A FFV L M LI+G I CFSLFF CN
Sbjct: 64  LFSYCVGNVLSS-ELICKGGPLDFSSIPSRAFKTAMFFVALGMFLIIGSIICFSLFFICN 122

Query: 121 TATVYKICAWMQLLAALCLVLGCMIFPDGWDAETIRDMCGAKTGKYSLGDCSVRWAYILA 180
           TATVYKICAWMQL AA  L++GC+++PDGWD+  +R MCG +TGKY+LG C++RWA++LA
Sbjct: 123 TATVYKICAWMQLAAATGLMIGCLVYPDGWDSSEVRRMCGEQTGKYTLGHCTIRWAFMLA 182

Query: 181 IIGILNALILSFLAFVLGNRQTDLLQEELKPENKDFV 217
           I+ I +ALILSFLAFVLG RQ  LL ++ K +  + V
Sbjct: 183 ILSIGDALILSFLAFVLGYRQDKLLPDDYKADGTEEV 219


>gi|5031865 lipoma HMGIC fusion partner [Homo sapiens]
          Length = 200

 Score = 89.0 bits (219), Expect = 4e-18
 Identities = 57/193 (29%), Positives = 92/193 (47%), Gaps = 20/193 (10%)

Query: 23  GVLWAIFTICFAIINVVVFIQPYWVGDSVSTPKPGYFGLFHYC-VGSGLAGRELTCR--- 78
           GV+WA+ +   A  + V F  PYW+  S    KP  FG F  C        R++      
Sbjct: 9   GVIWALLSFLCAATSCVGFFMPYWLWGS-QLGKPVSFGTFRRCSYPVHDESRQMMVMVEE 67

Query: 79  -GSFTDFSTIPSSAFK--------AAAFFVLLSMVLILGCITCFSLFFFCNTATVYKICA 129
            G +  F  IPS+ ++             +L+++  ++GC  C S      + TV ++  
Sbjct: 68  CGRYASFQGIPSAEWRICTIVTGLGCGLLLLVALTALMGC--CVSDLI---SRTVGRVAG 122

Query: 130 WMQLLAALCLVLGCMIFPDGWDAETIRDMCGAKTGKYSLGDCSVRWAYILAIIGILNALI 189
            +Q L  L +  GC ++P GWD+E +R  CG  +G++ LG C + WAY     G   A++
Sbjct: 123 GIQFLGGLLIGAGCALYPLGWDSEEVRQTCGYTSGQFDLGKCEIGWAYYCTGAGATAAML 182

Query: 190 L-SFLAFVLGNRQ 201
           L ++LA   G +Q
Sbjct: 183 LCTWLACFSGKKQ 195


>gi|32698676 lipoma HMGIC fusion partner-like 2 [Homo sapiens]
          Length = 228

 Score = 81.6 bits (200), Expect = 6e-16
 Identities = 57/217 (26%), Positives = 100/217 (46%), Gaps = 25/217 (11%)

Query: 24  VLWAIFTICFAIINVVVFIQPYWV-------------GDSVSTPKPGY--FGLFHYCV-- 66
           +LW + +I  A   ++ F+   W+             G    +P+P +   G++  C+  
Sbjct: 11  MLWTLLSIVVAFAELIAFMSADWLIGKARSRGGVEPAGPGGGSPEPYHPTLGIYARCIRN 70

Query: 67  -GSGLAGRELTCRGSFTDFSTIPSSAFKAAAFFVLLSMVLILGCITCFSLFFFCNTA--- 122
            G     R+  C      F  I S  ++A A F+ +  + IL  +   S+F  C  +   
Sbjct: 71  PGVQHFQRDTLCGPYAESFGEIASGFWQATAIFLAVG-IFILCMVALVSVFTMCVQSIMK 129

Query: 123 -TVYKICAWMQLLAALCLVLGCMIFPDGWDAETIRDMCGAKTGKYSLGDCSVRWAYILAI 181
            +++ +C  +Q +A L L+LG +++P GW  +   D CG     Y  GDCS+ WA+  AI
Sbjct: 130 KSIFNVCGLLQGIAGLFLILGLILYPAGWGCQKAIDYCGHYASAYKPGDCSLGWAFYTAI 189

Query: 182 IG-ILNALILSFLAFVLGNRQTDLLQEELKPENKDFV 217
            G +L  +   F A       +D +QEE++ E K+ +
Sbjct: 190 GGTVLTFICAVFSAQAEIATSSDKVQEEIE-EGKNLI 225


>gi|30039704 lipoma HMGIC fusion partner-like 1 [Homo sapiens]
          Length = 220

 Score = 73.6 bits (179), Expect = 2e-13
 Identities = 58/226 (25%), Positives = 98/226 (43%), Gaps = 20/226 (8%)

Query: 16  MRNSRA-IGVLWAIFTICFAIINVVVFIQPYWVGDSVSTPKPGYFGLFHYCV----GSGL 70
           MR+S   +G LWA  ++  A+ +   +  PYW+  S    KP  F  F  C     G G 
Sbjct: 1   MRSSLTMVGTLWAFLSLVTAVTSSTSYFLPYWLFGS-QMGKPVSFSTFRRCNYPVRGEGH 59

Query: 71  AGRELTCRGSFTDFSTIPSSAFK--------AAAFFVLLSMVLILGCITCFSLFFFCNTA 122
           +   +   G +  F+ IPS A++          A  +L+++  +LGC  C        + 
Sbjct: 60  SLIMVEECGRYASFNAIPSLAWQMCTVVTGAGCALLLLVALAAVLGC--CMEELI---SR 114

Query: 123 TVYKICAWMQLLAALCLVLGCMIFPDGWDAETIRDMCGAKTGKYSLGDCSVRWAYILAII 182
            + +     Q +  L +  GC ++P GW++  I   CG  + ++ LG C + WAY  A  
Sbjct: 115 MMGRCMGAAQFVGGLLISSGCALYPLGWNSPEIMQTCGNVSNQFQLGTCRLGWAYYCAGG 174

Query: 183 GILNA-LILSFLAFVLGNRQTDLLQEELKPENKDFVGSTVSSVLRP 227
           G   A LI ++L+   G     ++  E    N +     +   L+P
Sbjct: 175 GAAAAMLICTWLSCFAGRNPKPVILVESIMRNTNSYAMELDHCLKP 220


>gi|48717249 transmembrane protein 211 [Homo sapiens]
          Length = 129

 Score = 43.5 bits (101), Expect = 2e-04
 Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 4/66 (6%)

Query: 131 MQLLAALCLVLGCMIFPDGWDAETIRDMCGAKTGKYSLGDCSVRWAYILAIIGILNALIL 190
           +Q +AA  +++G +IFP G  +  I+++C A +  Y  G C + W Y+ A   ILNA++ 
Sbjct: 38  VQAVAATAMIVGLLIFPIGLASPFIKEVCEASSMYYG-GKCRLGWGYMTA---ILNAVLA 93

Query: 191 SFLAFV 196
           S L  +
Sbjct: 94  SLLPII 99


>gi|4505907 peripheral myelin protein 22 [Homo sapiens]
          Length = 160

 Score = 33.1 bits (74), Expect = 0.23
 Identities = 34/124 (27%), Positives = 55/124 (44%), Gaps = 23/124 (18%)

Query: 84  FSTIPSSAFKAAAFFVLLSMVLILGCITCFSLF-FFCNTATVYK-----ICAWMQLLAAL 137
           FS+ P+   ++    ++LS++  +      SLF FFC   T+ K     I    Q+LA L
Sbjct: 54  FSSSPNEWLQSVQATMILSIIFSI-----LSLFLFFCQLFTLTKGGRFYITGIFQILAGL 108

Query: 138 CLVLGCMIFPDGWDAETIRDMCGAKTGKYSLGDCSVRWAYILAIIGILNALILSFLAFVL 197
           C++    I+       T+R         YS G     +AYILA +    AL+   +  +L
Sbjct: 109 CVMSAAAIY-------TVRHPEWHLNSDYSYG-----FAYILAWVAFPLALLSGVIYVIL 156

Query: 198 GNRQ 201
             R+
Sbjct: 157 RKRE 160


>gi|24430165 peripheral myelin protein 22 [Homo sapiens]
          Length = 160

 Score = 33.1 bits (74), Expect = 0.23
 Identities = 34/124 (27%), Positives = 55/124 (44%), Gaps = 23/124 (18%)

Query: 84  FSTIPSSAFKAAAFFVLLSMVLILGCITCFSLF-FFCNTATVYK-----ICAWMQLLAAL 137
           FS+ P+   ++    ++LS++  +      SLF FFC   T+ K     I    Q+LA L
Sbjct: 54  FSSSPNEWLQSVQATMILSIIFSI-----LSLFLFFCQLFTLTKGGRFYITGIFQILAGL 108

Query: 138 CLVLGCMIFPDGWDAETIRDMCGAKTGKYSLGDCSVRWAYILAIIGILNALILSFLAFVL 197
           C++    I+       T+R         YS G     +AYILA +    AL+   +  +L
Sbjct: 109 CVMSAAAIY-------TVRHPEWHLNSDYSYG-----FAYILAWVAFPLALLSGVIYVIL 156

Query: 198 GNRQ 201
             R+
Sbjct: 157 RKRE 160


>gi|24430163 peripheral myelin protein 22 [Homo sapiens]
          Length = 160

 Score = 33.1 bits (74), Expect = 0.23
 Identities = 34/124 (27%), Positives = 55/124 (44%), Gaps = 23/124 (18%)

Query: 84  FSTIPSSAFKAAAFFVLLSMVLILGCITCFSLF-FFCNTATVYK-----ICAWMQLLAAL 137
           FS+ P+   ++    ++LS++  +      SLF FFC   T+ K     I    Q+LA L
Sbjct: 54  FSSSPNEWLQSVQATMILSIIFSI-----LSLFLFFCQLFTLTKGGRFYITGIFQILAGL 108

Query: 138 CLVLGCMIFPDGWDAETIRDMCGAKTGKYSLGDCSVRWAYILAIIGILNALILSFLAFVL 197
           C++    I+       T+R         YS G     +AYILA +    AL+   +  +L
Sbjct: 109 CVMSAAAIY-------TVRHPEWHLNSDYSYG-----FAYILAWVAFPLALLSGVIYVIL 156

Query: 198 GNRQ 201
             R+
Sbjct: 157 RKRE 160


>gi|4503561 epithelial membrane protein 2 [Homo sapiens]
          Length = 167

 Score = 30.0 bits (66), Expect = 1.9
 Identities = 37/174 (21%), Positives = 71/174 (40%), Gaps = 29/174 (16%)

Query: 34  AIINVVVFIQPYWVGDSVSTPKPGYFGLFHYCVGSGLAGRELTCRGSFTDFSTIPSSAFK 93
           A++ +      +WVGD        +  ++  C  +           SF ++ST+     +
Sbjct: 17  ALLFIATVDNAWWVGDEF------FADVWRICTNNTNC---TVINDSFQEYSTL-----Q 62

Query: 94  AAAFFVLLSMVLILGCITCFSLF----FFCNTATVYKICAWMQLLAALCLVLGCMIFPDG 149
           A    ++LS +L   C   F +F    F       + + + +QL++ LC+++   I+ D 
Sbjct: 63  AVQATMILSTIL---CCIAFFIFVLQLFRLKQGERFVLTSIIQLMSCLCVMIAASIYTD- 118

Query: 150 WDAETIRDMCGAKTGKY--SLGDCSVRWAYILAIIGILNALILSFLAFVLGNRQ 201
              E I D    K  K+     + S  ++YILA +      I   +  +L  R+
Sbjct: 119 -RREDIHD----KNAKFYPVTREGSYGYSYILAWVAFACTFISGMMYLILRKRK 167


>gi|40805843 K(lysine) acetyltransferase 2B [Homo sapiens]
          Length = 832

 Score = 29.6 bits (65), Expect = 2.5
 Identities = 25/92 (27%), Positives = 36/92 (39%), Gaps = 15/92 (16%)

Query: 4   SQEASKLYHEHYMRNSRAIGVLWAIFTICFAIINVVVFIQPYWVG--------DSVSTPK 55
           S E  K Y  H M + +        + I   I+N + +   Y +G          +  PK
Sbjct: 578 SNEQVKGYGTHLMNHLKE-------YHIKHDILNFLTYADEYAIGYFKKQGFSKEIKIPK 630

Query: 56  PGYFGLFHYCVGSGLAGRELTCRGSFTDFSTI 87
             Y G      G+ L G EL  R  +T+FS I
Sbjct: 631 TKYVGYIKDYEGATLMGCELNPRIPYTEFSVI 662


>gi|98986325 dual oxidase activator 2 [Homo sapiens]
          Length = 320

 Score = 28.9 bits (63), Expect = 4.3
 Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 12/52 (23%)

Query: 10  LYHEHYMRNSRAIGVLWAIFTICFAIINVVVFIQPYWVGDSVSTPKPGYFGL 61
           LYH++++    A   LW  F  CF +++ V+          +STP P Y GL
Sbjct: 169 LYHQYHLAGHYASATLWVAF--CFWLLSNVL----------LSTPAPLYGGL 208


>gi|51092270 hypothetical protein LOC375057 [Homo sapiens]
          Length = 141

 Score = 28.5 bits (62), Expect = 5.6
 Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 1/58 (1%)

Query: 134 LAALCLVLGCMIFPDGWDAETIRDMCGAKTGKYSLGDCSVRWAYI-LAIIGILNALIL 190
           +A +CL L   +   G        +CGA+T       C V W  I  A+I IL A+++
Sbjct: 53  VAVICLFLNTFVPGLGTFVSAFTVLCGARTDLPDRHVCCVFWLNIAAALIQILTAIVM 110


>gi|228008400 synaptotagmin binding, cytoplasmic RNA interacting
           protein isoform 6 [Homo sapiens]
          Length = 562

 Score = 28.1 bits (61), Expect = 7.4
 Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 7/39 (17%)

Query: 4   SQEASKLYHEHYMRNSRAIGVLWAIFTICFAIINVVVFI 42
           +QEA KLY+ H +R+ + IGV       C ++ N  +F+
Sbjct: 216 AQEAVKLYNNHEIRSGKHIGV-------CISVANNRLFV 247


>gi|228008398 synaptotagmin binding, cytoplasmic RNA interacting
           protein isoform 3 [Homo sapiens]
          Length = 527

 Score = 28.1 bits (61), Expect = 7.4
 Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 7/39 (17%)

Query: 4   SQEASKLYHEHYMRNSRAIGVLWAIFTICFAIINVVVFI 42
           +QEA KLY+ H +R+ + IGV       C ++ N  +F+
Sbjct: 216 AQEAVKLYNNHEIRSGKHIGV-------CISVANNRLFV 247


>gi|228008396 synaptotagmin binding, cytoplasmic RNA interacting
           protein isoform 2 [Homo sapiens]
          Length = 464

 Score = 28.1 bits (61), Expect = 7.4
 Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 7/39 (17%)

Query: 4   SQEASKLYHEHYMRNSRAIGVLWAIFTICFAIINVVVFI 42
           +QEA KLY+ H +R+ + IGV       C ++ N  +F+
Sbjct: 118 AQEAVKLYNNHEIRSGKHIGV-------CISVANNRLFV 149


>gi|228008295 synaptotagmin binding, cytoplasmic RNA interacting
           protein isoform 4 [Homo sapiens]
          Length = 588

 Score = 28.1 bits (61), Expect = 7.4
 Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 7/39 (17%)

Query: 4   SQEASKLYHEHYMRNSRAIGVLWAIFTICFAIINVVVFI 42
           +QEA KLY+ H +R+ + IGV       C ++ N  +F+
Sbjct: 216 AQEAVKLYNNHEIRSGKHIGV-------CISVANNRLFV 247


>gi|228008293 synaptotagmin binding, cytoplasmic RNA interacting
           protein isoform 5 [Homo sapiens]
          Length = 561

 Score = 28.1 bits (61), Expect = 7.4
 Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 7/39 (17%)

Query: 4   SQEASKLYHEHYMRNSRAIGVLWAIFTICFAIINVVVFI 42
           +QEA KLY+ H +R+ + IGV       C ++ N  +F+
Sbjct: 216 AQEAVKLYNNHEIRSGKHIGV-------CISVANNRLFV 247


>gi|228008291 synaptotagmin binding, cytoplasmic RNA interacting
           protein isoform 1 [Homo sapiens]
          Length = 623

 Score = 28.1 bits (61), Expect = 7.4
 Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 7/39 (17%)

Query: 4   SQEASKLYHEHYMRNSRAIGVLWAIFTICFAIINVVVFI 42
           +QEA KLY+ H +R+ + IGV       C ++ N  +F+
Sbjct: 216 AQEAVKLYNNHEIRSGKHIGV-------CISVANNRLFV 247


>gi|122937267 lemur tyrosine kinase 3 [Homo sapiens]
          Length = 1489

 Score = 28.1 bits (61), Expect = 7.4
 Identities = 21/54 (38%), Positives = 27/54 (50%), Gaps = 4/54 (7%)

Query: 194 AFVLGNRQT-DLLQEELKPENKDFVGSTVSSVLRPGGDVSGWGVLPCPVAHSQG 246
           A VLG R T   ++EE + E     G   SS+   GG  S  G LPCP+   +G
Sbjct: 655 AEVLGERGTAPWVEEEEEEEEGSSPGEDSSSL---GGGPSRRGPLPCPLCSREG 705


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.328    0.142    0.469 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,802,136
Number of Sequences: 37866
Number of extensions: 416719
Number of successful extensions: 1202
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 1185
Number of HSP's gapped (non-prelim): 22
length of query: 247
length of database: 18,247,518
effective HSP length: 100
effective length of query: 147
effective length of database: 14,460,918
effective search space: 2125754946
effective search space used: 2125754946
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.