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Search of human proteins with 38348332
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|38348332 killer cell lectin-like receptor subfamily G,
member 2 [Homo sapiens]
(409 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|38348332 killer cell lectin-like receptor subfamily G, member... 855 0.0
gi|168229214 C-type lectin domain family 2, member L [Homo sapiens] 83 4e-16
gi|47717096 killer cell lectin-like receptor subfamily G, member... 77 4e-14
gi|47717092 killer cell lectin-like receptor subfamily C, member... 71 2e-12
gi|7262384 killer cell lectin-like receptor subfamily C, member ... 71 2e-12
gi|7019447 osteoclast inhibitory lectin isoform 1 [Homo sapiens] 69 1e-11
gi|37577107 C-type lectin, superfamily member 2 [Homo sapiens] 68 1e-11
gi|52426782 osteoclast inhibitory lectin isoform 2 [Homo sapiens] 65 1e-10
gi|47717094 killer cell lectin-like receptor subfamily C, member... 64 2e-10
gi|4504881 killer cell lectin-like receptor subfamily C, member ... 64 2e-10
gi|46409326 C-type lectin domain family 9, member A [Homo sapiens] 62 7e-10
gi|75709169 killer cell lectin-like receptor subfamily C, member... 60 3e-09
gi|18079216 CASK interacting protein 1 [Homo sapiens] 57 2e-08
gi|169234653 NKG2-D type II integral membrane protein [Homo sapi... 57 2e-08
gi|194018501 C-type lectin domain family 12, member B isoform 1 ... 56 5e-08
gi|33667103 C-type lectin, superfamily member 14 isoform 1 [Homo... 55 1e-07
gi|13384604 dendritic cell-associated C-type lectin 1 isoform b ... 54 2e-07
gi|149773456 hypothetical protein LOC643314 [Homo sapiens] 54 3e-07
gi|53832016 C-type lectin, superfamily member 14 isoform 2 [Homo... 54 3e-07
gi|4505501 oxidized low density lipoprotein (lectin-like) recept... 54 3e-07
gi|223278347 C-type lectin domain family 4, member M isoform 9 [... 53 6e-07
gi|223278339 C-type lectin domain family 4, member M isoform 7 [... 53 6e-07
gi|223278337 C-type lectin domain family 4, member M isoform 12 ... 53 6e-07
gi|223278335 C-type lectin domain family 4, member M isoform 2 [... 53 6e-07
gi|223278350 C-type lectin domain family 4, member M isoform 8 [... 53 6e-07
gi|223278342 C-type lectin domain family 4, member M isoform 11 ... 53 6e-07
gi|42542390 C-type lectin domain family 4, member M isoform 1 [H... 53 6e-07
gi|112734870 hypothetical protein LOC57648 [Homo sapiens] 53 6e-07
gi|110832843 TBP-associated factor 4 [Homo sapiens] 52 7e-07
gi|195222725 C-type lectin domain family 2, member A [Homo sapiens] 52 7e-07
>gi|38348332 killer cell lectin-like receptor subfamily G, member 2
[Homo sapiens]
Length = 409
Score = 855 bits (2208), Expect = 0.0
Identities = 409/409 (100%), Positives = 409/409 (100%)
Query: 1 MEESWEAAPGGQAGAELPMEPVGSLVPTLEQPQVPAKVRQPEGPESSPSPAGAVEKAAGA 60
MEESWEAAPGGQAGAELPMEPVGSLVPTLEQPQVPAKVRQPEGPESSPSPAGAVEKAAGA
Sbjct: 1 MEESWEAAPGGQAGAELPMEPVGSLVPTLEQPQVPAKVRQPEGPESSPSPAGAVEKAAGA 60
Query: 61 GLEPSSKKKPPSPRPGSPRVPPLSLGYGVCPEPPSPGPALVKLPRNGEAPGAEPAPSAWA 120
GLEPSSKKKPPSPRPGSPRVPPLSLGYGVCPEPPSPGPALVKLPRNGEAPGAEPAPSAWA
Sbjct: 61 GLEPSSKKKPPSPRPGSPRVPPLSLGYGVCPEPPSPGPALVKLPRNGEAPGAEPAPSAWA 120
Query: 121 PMELQVDVRVKPVGAAGGSSTPSPRPSTRFLKVPVPESPAFSRHADPAHQLLLRAPSQGG 180
PMELQVDVRVKPVGAAGGSSTPSPRPSTRFLKVPVPESPAFSRHADPAHQLLLRAPSQGG
Sbjct: 121 PMELQVDVRVKPVGAAGGSSTPSPRPSTRFLKVPVPESPAFSRHADPAHQLLLRAPSQGG 180
Query: 181 TWGRRSPLAAARTESGCDAEGRASPAEGSAGSPGSPTCCRCKELGLEKEDAALLPRAGLD 240
TWGRRSPLAAARTESGCDAEGRASPAEGSAGSPGSPTCCRCKELGLEKEDAALLPRAGLD
Sbjct: 181 TWGRRSPLAAARTESGCDAEGRASPAEGSAGSPGSPTCCRCKELGLEKEDAALLPRAGLD 240
Query: 241 GDEKLPRAVTLTGLPMYVKSLYWALAFMAVLLAVSGVVIVVLASRAGARCQQCPPGWVLS 300
GDEKLPRAVTLTGLPMYVKSLYWALAFMAVLLAVSGVVIVVLASRAGARCQQCPPGWVLS
Sbjct: 241 GDEKLPRAVTLTGLPMYVKSLYWALAFMAVLLAVSGVVIVVLASRAGARCQQCPPGWVLS 300
Query: 301 EEHCYYFSAEAQAWEASQAFCSAYHATLPLLSHTQDFLGRYPVSRHSWVGAWRGPQGWHW 360
EEHCYYFSAEAQAWEASQAFCSAYHATLPLLSHTQDFLGRYPVSRHSWVGAWRGPQGWHW
Sbjct: 301 EEHCYYFSAEAQAWEASQAFCSAYHATLPLLSHTQDFLGRYPVSRHSWVGAWRGPQGWHW 360
Query: 361 IDEAPLPPQLLPEDGEDNLDINCGALEEGTLVAANCSTPRPWVCAKGTQ 409
IDEAPLPPQLLPEDGEDNLDINCGALEEGTLVAANCSTPRPWVCAKGTQ
Sbjct: 361 IDEAPLPPQLLPEDGEDNLDINCGALEEGTLVAANCSTPRPWVCAKGTQ 409
>gi|168229214 C-type lectin domain family 2, member L [Homo sapiens]
Length = 214
Score = 83.2 bits (204), Expect = 4e-16
Identities = 53/190 (27%), Positives = 84/190 (44%), Gaps = 19/190 (10%)
Query: 231 AALLPRAGLDGDEKLPRAVTLTGLPMYVKSLYWALAF-----------MAVLLAVSGVVI 279
AA PR+ + + + P + Y S W A +AVLL VV+
Sbjct: 26 AAPRPRSPAEAEARGPEGLLRRSGSGYEGSTSWKAALEDTTTRLLLGAIAVLLFAILVVM 85
Query: 280 VVLASRAGARCQQ-CPPGWVLSEEHCYYFSAEAQAWEASQAFCSAYHATLPLLSHTQ--D 336
+LAS+ +C+ CP W+L CY+FS E + W + +C + A L ++ + +
Sbjct: 86 SILASKGCIKCEAPCPEDWLLYGRKCYFFSEEPRDWNTGRQYCHTHEAVLAVIQSQKELE 145
Query: 337 FLGRYPVSRHSWVGAWRGPQGWHWIDEAPLPPQLLPEDGEDNLDINCGALEEGTLVAANC 396
F+ ++ R W+G R +HW++ P P G C +E LV+ C
Sbjct: 146 FMFKF-TRREPWIGLRRVGDEFHWVNGDPFDPDTFTIAGPG----ECVFVEPTRLVSTEC 200
Query: 397 STPRPWVCAK 406
RPWVC+K
Sbjct: 201 LMTRPWVCSK 210
>gi|47717096 killer cell lectin-like receptor subfamily G, member 1
[Homo sapiens]
Length = 189
Score = 76.6 bits (187), Expect = 4e-14
Identities = 40/121 (33%), Positives = 57/121 (47%), Gaps = 6/121 (4%)
Query: 288 ARCQQCPPGWVLSEEHCYYFSAEAQAWEASQAFCSAYHATLPLLSHTQD--FLGRYPVSR 345
A C CP W+ HCYYFS E + W +S FC A + L +++ Q+ L +
Sbjct: 70 ASCPSCPDRWMKYGNHCYYFSVEEKDWNSSLEFCLARDSHLLVITDNQEMSLLQVFLSEA 129
Query: 346 HSWVGAWRGPQGWHWIDEAPLPPQLLPEDGEDNLDINCGALEEGTLVAANCSTPRPWVCA 405
W+G R GW W D +PL ++ CGA+ + L A++C P WVC
Sbjct: 130 FCWIGL-RNNSGWRWEDGSPLN---FSRISSNSFVQTCGAINKNGLQASSCEVPLHWVCK 185
Query: 406 K 406
K
Sbjct: 186 K 186
>gi|47717092 killer cell lectin-like receptor subfamily C, member 1
isoform NKG2-B [Homo sapiens]
Length = 215
Score = 71.2 bits (173), Expect = 2e-12
Identities = 44/164 (26%), Positives = 74/164 (45%), Gaps = 6/164 (3%)
Query: 241 GDEKLPRAVTLTGLPMYVKSLYWALAFMAVLLAVSGVVIVVLASRAGARCQQCPPGWVLS 300
G++K L P K + L + ++L S V IVV+ SR C CP W+
Sbjct: 54 GNDKTYHCKDLPSAPE--KLIVGILGIICLILMASVVTIVVIPSR---HCGHCPEEWITY 108
Query: 301 EEHCYYFSAEAQAWEASQAFCSAYHATLPLLSHTQDFLGRYPVSRHSWVGAWRGPQGWHW 360
CYY E + WE S C++ +++L + + ++ +S SW+G +R W
Sbjct: 109 SNSCYYIGKERRTWEESLLACTSKNSSLLSIDNEEEMKFLSIISPSSWIGVFRNSSHHPW 168
Query: 361 IDEAPLPPQLLPEDGEDNLDINCGALEEGTLVAANCSTPRPWVC 404
+ L + +D DN ++NC L+ L +A C + + C
Sbjct: 169 VTMNGLAFKHEIKD-SDNAELNCAVLQVNRLKSAQCGSSIIYHC 211
>gi|7262384 killer cell lectin-like receptor subfamily C, member 1
isoform NKG2-B [Homo sapiens]
Length = 215
Score = 71.2 bits (173), Expect = 2e-12
Identities = 44/164 (26%), Positives = 74/164 (45%), Gaps = 6/164 (3%)
Query: 241 GDEKLPRAVTLTGLPMYVKSLYWALAFMAVLLAVSGVVIVVLASRAGARCQQCPPGWVLS 300
G++K L P K + L + ++L S V IVV+ SR C CP W+
Sbjct: 54 GNDKTYHCKDLPSAPE--KLIVGILGIICLILMASVVTIVVIPSR---HCGHCPEEWITY 108
Query: 301 EEHCYYFSAEAQAWEASQAFCSAYHATLPLLSHTQDFLGRYPVSRHSWVGAWRGPQGWHW 360
CYY E + WE S C++ +++L + + ++ +S SW+G +R W
Sbjct: 109 SNSCYYIGKERRTWEESLLACTSKNSSLLSIDNEEEMKFLSIISPSSWIGVFRNSSHHPW 168
Query: 361 IDEAPLPPQLLPEDGEDNLDINCGALEEGTLVAANCSTPRPWVC 404
+ L + +D DN ++NC L+ L +A C + + C
Sbjct: 169 VTMNGLAFKHEIKD-SDNAELNCAVLQVNRLKSAQCGSSIIYHC 211
>gi|7019447 osteoclast inhibitory lectin isoform 1 [Homo sapiens]
Length = 191
Score = 68.6 bits (166), Expect = 1e-11
Identities = 47/159 (29%), Positives = 67/159 (42%), Gaps = 17/159 (10%)
Query: 260 SLYWALAFMAVLLAVSGVVIVVLASRAGARCQQ---------CPPGWVLSEEHCYYFSAE 310
+L W L F+ + L + +V S A C Q CP W+ + C+YFS +
Sbjct: 33 TLIWRLFFLIMFLTIIVCGMVAALSAIRANCHQEPSVCLQAACPESWIGFQRKCFYFSDD 92
Query: 311 AQAWEASQAFCSAYHATLPLLSHTQD--FLGRYPVSRHSWVGAWRGP-QGWHWIDEAPLP 367
+ W +SQ FC + A L + Q+ FL RY W+G R Q W WI+
Sbjct: 93 TKNWTSSQRFCDSQDADLAQVESFQELNFLLRYKGPSDHWIGLSREQGQPWKWINGTEWT 152
Query: 368 PQLLPEDGEDNLDINCGALEEGTLVAANCSTPRPWVCAK 406
Q P G C L + +A T R W+C+K
Sbjct: 153 RQ-FPILGAG----ECAYLNDKGASSARHYTERKWICSK 186
>gi|37577107 C-type lectin, superfamily member 2 [Homo sapiens]
Length = 149
Score = 68.2 bits (165), Expect = 1e-11
Identities = 40/142 (28%), Positives = 61/142 (42%), Gaps = 10/142 (7%)
Query: 268 MAVLLAVSGVVIVVLASRAGARCQQCPPGWVLSEEHCYYFSAEAQAWEASQAFCSAYHAT 327
+ VL+ + + ++V +R CP W+ + CYYFS E W +S+ CS HA
Sbjct: 12 VGVLITTNIITLIVKLTRDSQSL--CPYDWIGFQNKCYYFSKEEGDWNSSKYNCSTQHAD 69
Query: 328 LPLLSHTQD--FLGRYPVSRHSWVGAWRGP-QGWHWIDEAPLPPQLLPEDGEDNLDINCG 384
L ++ + ++ FL RY S W+G + W+D A E C
Sbjct: 70 LTIIDNIEEMNFLRRYKCSSDHWIGLKMAKNRTGQWVDGATFTKSFGMRGSE-----GCA 124
Query: 385 ALEEGTLVAANCSTPRPWVCAK 406
L + A C T R W+C K
Sbjct: 125 YLSDDGAATARCYTERKWICRK 146
>gi|52426782 osteoclast inhibitory lectin isoform 2 [Homo sapiens]
Length = 194
Score = 65.1 bits (157), Expect = 1e-10
Identities = 40/132 (30%), Positives = 59/132 (44%), Gaps = 12/132 (9%)
Query: 260 SLYWALAFMAVLLAVSGVVIVVLASRAGARCQQ---------CPPGWVLSEEHCYYFSAE 310
+L W L F+ + L + +V S A C Q CP W+ + C+YFS +
Sbjct: 33 TLIWRLFFLIMFLTIIVCGMVAALSAIRANCHQEPSVCLQAACPESWIGFQRKCFYFSDD 92
Query: 311 AQAWEASQAFCSAYHATLPLLSHTQD--FLGRYPVSRHSWVGAWRGP-QGWHWIDEAPLP 367
+ W +SQ FC + A L + Q+ FL RY W+G R Q W WI+
Sbjct: 93 TKNWTSSQRFCDSQDADLAQVESFQELNFLLRYKGPSDHWIGLSREQGQPWKWINGTEWT 152
Query: 368 PQLLPEDGEDNL 379
QL+ ++ NL
Sbjct: 153 RQLVMKEDGANL 164
>gi|47717094 killer cell lectin-like receptor subfamily C, member 1
isoform NKG2-A [Homo sapiens]
Length = 233
Score = 64.3 bits (155), Expect = 2e-10
Identities = 43/179 (24%), Positives = 74/179 (41%), Gaps = 18/179 (10%)
Query: 241 GDEKLPRAVTLTGLPMYVKSLYWALAFMAVLLAVSGVVIVVLAS---------------R 285
G++K L P K + L + ++L S V IVV+ S +
Sbjct: 54 GNDKTYHCKDLPSAPE--KLIVGILGIICLILMASVVTIVVIPSTLIQRHNNSSLNTRTQ 111
Query: 286 AGARCQQCPPGWVLSEEHCYYFSAEAQAWEASQAFCSAYHATLPLLSHTQDFLGRYPVSR 345
C CP W+ CYY E + WE S C++ +++L + + ++ +S
Sbjct: 112 KARHCGHCPEEWITYSNSCYYIGKERRTWEESLLACTSKNSSLLSIDNEEEMKFLSIISP 171
Query: 346 HSWVGAWRGPQGWHWIDEAPLPPQLLPEDGEDNLDINCGALEEGTLVAANCSTPRPWVC 404
SW+G +R W+ L + +D DN ++NC L+ L +A C + + C
Sbjct: 172 SSWIGVFRNSSHHPWVTMNGLAFKHEIKD-SDNAELNCAVLQVNRLKSAQCGSSIIYHC 229
>gi|4504881 killer cell lectin-like receptor subfamily C, member 1
isoform NKG2-A [Homo sapiens]
Length = 233
Score = 64.3 bits (155), Expect = 2e-10
Identities = 43/179 (24%), Positives = 74/179 (41%), Gaps = 18/179 (10%)
Query: 241 GDEKLPRAVTLTGLPMYVKSLYWALAFMAVLLAVSGVVIVVLAS---------------R 285
G++K L P K + L + ++L S V IVV+ S +
Sbjct: 54 GNDKTYHCKDLPSAPE--KLIVGILGIICLILMASVVTIVVIPSTLIQRHNNSSLNTRTQ 111
Query: 286 AGARCQQCPPGWVLSEEHCYYFSAEAQAWEASQAFCSAYHATLPLLSHTQDFLGRYPVSR 345
C CP W+ CYY E + WE S C++ +++L + + ++ +S
Sbjct: 112 KARHCGHCPEEWITYSNSCYYIGKERRTWEESLLACTSKNSSLLSIDNEEEMKFLSIISP 171
Query: 346 HSWVGAWRGPQGWHWIDEAPLPPQLLPEDGEDNLDINCGALEEGTLVAANCSTPRPWVC 404
SW+G +R W+ L + +D DN ++NC L+ L +A C + + C
Sbjct: 172 SSWIGVFRNSSHHPWVTMNGLAFKHEIKD-SDNAELNCAVLQVNRLKSAQCGSSIIYHC 229
>gi|46409326 C-type lectin domain family 9, member A [Homo sapiens]
Length = 241
Score = 62.4 bits (150), Expect = 7e-10
Identities = 37/122 (30%), Positives = 58/122 (47%), Gaps = 8/122 (6%)
Query: 293 CPPGWVLSEEHCYYFSAEAQAWEASQAFCSAYHATLPLLSHTQDF------LGRYPVSRH 346
CP W+ + E CYY S W SQ C +TL + ++ L + S
Sbjct: 113 CPNNWIQNRESCYYVSEIWSIWHTSQENCLKEGSTLLQIESKEEMDFITGSLRKIKGSYD 172
Query: 347 SWVGAWR-GPQG-WHWIDEAPLPPQLLPEDGEDNLDINCGALEEGTLVAANCSTPRPWVC 404
WVG + G G W W D + P LLP + + + CG ++ +L+++NCST + ++C
Sbjct: 173 YWVGLSQDGHSGRWLWQDGSSPSPGLLPAERSQSANQVCGYVKSNSLLSSNCSTWKYFIC 232
Query: 405 AK 406
K
Sbjct: 233 EK 234
>gi|75709169 killer cell lectin-like receptor subfamily C, member 2
[Homo sapiens]
Length = 231
Score = 60.5 bits (145), Expect = 3e-09
Identities = 29/115 (25%), Positives = 52/115 (45%), Gaps = 1/115 (0%)
Query: 290 CQQCPPGWVLSEEHCYYFSAEAQAWEASQAFCSAYHATLPLLSHTQDFLGRYPVSRHSWV 349
C CP W+ CYY E + WE S C++ +++L + + ++ + SW+
Sbjct: 114 CGHCPEEWITYSNSCYYIGKERRTWEESLLACTSKNSSLLSIDNEEEMKFLASILPSSWI 173
Query: 350 GAWRGPQGWHWIDEAPLPPQLLPEDGEDNLDINCGALEEGTLVAANCSTPRPWVC 404
G +R W+ L + +D DN ++NC L+ L +A C + + C
Sbjct: 174 GVFRNSSHHPWVTINGLAFKHKIKD-SDNAELNCAVLQVNRLKSAQCGSSMIYHC 227
>gi|18079216 CASK interacting protein 1 [Homo sapiens]
Length = 1431
Score = 57.4 bits (137), Expect = 2e-08
Identities = 67/232 (28%), Positives = 86/232 (37%), Gaps = 37/232 (15%)
Query: 12 QAGA-ELPMEPVGSLVPTLEQPQVP------AKVRQPEGPESSPSPAGAVEKAAGAGLEP 64
QAG ELP P + P + +P + R+P P SP P G
Sbjct: 1185 QAGPPELPPPPPPAEPPPTDLAHLPPLPPPEGEARKPAKPPVSPKPVLTQPVPKLQGSPT 1244
Query: 65 SSKKKPPSPRPGSPRV-------PPLSLGYGVCPEPPSPGPALVKLPRNGEAPGAEPAPS 117
+ KK P P PGSP V PP+S P P P A+ LP P P+P+
Sbjct: 1245 PTSKKVPLPGPGSPEVKRAHGTPPPVSPKPPPPPTAPKPVKAVAGLPSGSAGPSPAPSPA 1304
Query: 118 AWAPMELQVDVRVKPVGAAGG-SSTPSPRPSTRFLKVPVPESPAFSRHADPAHQLLLRAP 176
P L KP G ++P+ PS + VP P + A A AP
Sbjct: 1305 RQPPAAL-----AKPPGTPPSLGASPAKPPSPGAPALHVPAKPPRAAAAAAAAAAAPPAP 1359
Query: 177 SQGGTWGRRSPLAAARTESGC---------------DAEG-RASPAEGSAGS 212
+G + G + T S C DA+G R S AE S GS
Sbjct: 1360 PEGASPGDSARQKLEET-SACLAAALQAVEEKIRQEDAQGPRDSAAEKSTGS 1410
Score = 37.4 bits (85), Expect = 0.025
Identities = 30/84 (35%), Positives = 41/84 (48%), Gaps = 14/84 (16%)
Query: 32 PQVPAKVRQPEGPESSPSPAGAVEKAAGAGLEPSSKKKPPSPRPGSPRVPPLS---LGYG 88
PQ P K R P P++ P G A A ++P+ + PP+ RP SPR P S G+
Sbjct: 777 PQTPTKTR-PGSPQALGGPHGPAP--ATAKVKPTPQLLPPTERPMSPRSLPQSPTHRGFA 833
Query: 89 -VCPE-------PPSPGPALVKLP 104
V P+ P +PGPA +P
Sbjct: 834 YVLPQPVEGEVGPAAPGPAPPPVP 857
Score = 35.8 bits (81), Expect = 0.072
Identities = 35/134 (26%), Positives = 51/134 (38%), Gaps = 22/134 (16%)
Query: 37 KVRQPEGPESSPSPAGAVEKAAGAGLEPSSKKKPPSPRPGSPRVPPLSLGYGVCPEPPSP 96
K ++ E P P G + +++P S + G P +PP P PP+
Sbjct: 1153 KAKEREAGPEPPPPLSVYHNGTG-----TVRRRPASEQAGPPELPP--------PPPPAE 1199
Query: 97 GPA--LVKLPRNGEAPGAEPAPSAWAPMELQVDVRVKPVGAAGGSSTPSPRPSTRFLKVP 154
P L LP G P+ P V +PV G SP P+++ + +P
Sbjct: 1200 PPPTDLAHLPPLPPPEGEARKPA--KPPVSPKPVLTQPVPKLQG----SPTPTSKKVPLP 1253
Query: 155 VPESPAFSR-HADP 167
P SP R H P
Sbjct: 1254 GPGSPEVKRAHGTP 1267
>gi|169234653 NKG2-D type II integral membrane protein [Homo
sapiens]
Length = 216
Score = 57.4 bits (137), Expect = 2e-08
Identities = 42/166 (25%), Positives = 69/166 (41%), Gaps = 18/166 (10%)
Query: 260 SLYWALAFMAVLLAVSGVVIVVLASRA---------------GARCQQCPPGWVLSEEHC 304
S ++ F+AV + + +++V + S + C CP W+ + +C
Sbjct: 51 SPFFFCCFIAVAMGIRFIIMVTIWSAVFLNSLFNQEVQIPLTESYCGPCPKNWICYKNNC 110
Query: 305 YYFSAEAQAWEASQAFCSAYHATLPLLSHTQDFLGRYPVSRHSWVGAWRGPQ--GWHWID 362
Y F E++ W SQA C + +A+L + +D V + W+G P W W D
Sbjct: 111 YQFFDESKNWYESQASCMSQNASLLKVYSKEDQDLLKLVKSYHWMGLVHIPTNGSWQWED 170
Query: 363 EAPLPPQLLPEDGEDNLDINCGALEEGTLVAANCSTPRPWVCAKGT 408
+ L P LL D A + NCSTP ++C + T
Sbjct: 171 GSILSPNLLTIIEMQKGDCALYASSFKGYI-ENCSTPNTYICMQRT 215
>gi|194018501 C-type lectin domain family 12, member B isoform 1
[Homo sapiens]
Length = 276
Score = 56.2 bits (134), Expect = 5e-08
Identities = 36/127 (28%), Positives = 56/127 (44%), Gaps = 9/127 (7%)
Query: 289 RCQQCPPGWVLSEEHCYYFSA-EAQAWEASQAFCSAYHATLPLLS--HTQDFLGRYPVSR 345
RC CP W + CYYF+ E + W S+ C ++TL + +DFL P+
Sbjct: 139 RCNPCPKMWQWYQNSCYYFTTNEEKTWANSRKDCIDKNSTLVKIDSLEEKDFLMSQPLLM 198
Query: 346 HS--WVG-AW-RGPQGWHWIDEAPLPPQLLPEDGEDNLD--INCGALEEGTLVAANCSTP 399
S W+G +W + W W D + P L D ++ C ++G + + CS
Sbjct: 199 FSFFWLGLSWDSSGRSWFWEDGSVPSPSLFSTKELDQINGSKGCAYFQKGNIYISRCSAE 258
Query: 400 RPWVCAK 406
W+C K
Sbjct: 259 IFWICEK 265
>gi|33667103 C-type lectin, superfamily member 14 isoform 1 [Homo
sapiens]
Length = 316
Score = 55.1 bits (131), Expect = 1e-07
Identities = 37/147 (25%), Positives = 60/147 (40%), Gaps = 24/147 (16%)
Query: 279 IVVLASRAGARCQQCPPGWVLSEEHCYYFSAEAQAWEASQAFCSAYHATLPLLS--HTQD 336
+ L + A CP WV ++ CY+FS +W ++ +C +A L +++ Q+
Sbjct: 167 VATLNNNASTEGTCCPVNWVEHQDSCYWFSHSGMSWAEAEKYCQLKNAHLVVINSREEQN 226
Query: 337 FLGRYPVSRHSWVGAWRGPQGWHWIDEAPL--------PPQLLPED--------GEDNLD 380
F+ +Y S ++W+G W W+D P Q P+D GED
Sbjct: 227 FVQKYLGSAYTWMGLSDPEGAWKWVDGTDYATGFQNWKPGQ--PDDWQGHGLGGGEDCAH 284
Query: 381 INCGALEEGTLVAANCSTPRPWVCAKG 407
+ +G C P WVC G
Sbjct: 285 FH----PDGRWNDDVCQRPYHWVCEAG 307
>gi|13384604 dendritic cell-associated C-type lectin 1 isoform b
[Homo sapiens]
Length = 201
Score = 54.3 bits (129), Expect = 2e-07
Identities = 42/158 (26%), Positives = 69/158 (43%), Gaps = 17/158 (10%)
Query: 263 WALAFMAVLLAVSGVVIVVLA---SRAGARCQQCPPGWVLSEEHCYYFSAEAQAWEASQA 319
W L +AV+L + +VI+V+A G CPP W++ E+ CY FS +W+ S+
Sbjct: 43 WRL--IAVILGILCLVILVIAVVLGTMGVLSSPCPPNWIIYEKSCYLFSMSLNSWDGSKR 100
Query: 320 FCSAYHATLPLLSHTQD--FLGRYPVSRHS---WVGAWRGPQ---GWHWIDEAPLPP--- 368
C + L + + + F+ + S+ W+G R PQ W W D +
Sbjct: 101 QCWQLGSNLLKIDSSNELGFIVKQVSSQPDNSFWIGLSR-PQTEVPWLWEDGSTFSSNLF 159
Query: 369 QLLPEDGEDNLDINCGALEEGTLVAANCSTPRPWVCAK 406
Q+ ++N NC + + CS P +C K
Sbjct: 160 QIRTTATQENPSPNCVWIHVSVIYDQLCSVPSYSICEK 197
>gi|149773456 hypothetical protein LOC643314 [Homo sapiens]
Length = 1427
Score = 53.9 bits (128), Expect = 3e-07
Identities = 50/158 (31%), Positives = 60/158 (37%), Gaps = 14/158 (8%)
Query: 13 AGAELPMEPVG--SLVPTLEQPQVPAKVRQPEGPESSPSPAGAVEKAAGAGLEPSSKKKP 70
A P EP + VPT E+P PA P PE SPA AV EP+S
Sbjct: 1005 AAVPTPEEPTSPAAAVPTPEEPTSPAAAVPP--PEEPTSPAAAVPTPE----EPTS---- 1054
Query: 71 PSPRPGSPRVPPLSLGYGVCPEPPSPGPALVKLPRNGEAPGAE-PAPSAWAPMELQVDVR 129
P+ +P P PE P+ A V P +P A P P V
Sbjct: 1055 PAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPTP 1114
Query: 130 VKPVGAAGGSSTPSPRPSTRFLKVPVPESPAFSRHADP 167
+P A TP P++ VP PE PAF A P
Sbjct: 1115 EEPASPAAAVPTPE-EPASPAAAVPTPEEPAFPAPAVP 1151
Score = 45.1 bits (105), Expect = 1e-04
Identities = 49/183 (26%), Positives = 67/183 (36%), Gaps = 7/183 (3%)
Query: 41 PEGPESSPSPAGAVEKAAGAGLEPSSKKKPPSPRPG--SPRVPPLSLGYGVCPEPPSPGP 98
PEGP + + A E+ A + S+ ++P SP +P P PE P+
Sbjct: 971 PEGPVTPATTVHAPEEPDTAAVRVSTPEEPASPAAAVPTPEEPTSPAAAVPTPEEPTSPA 1030
Query: 99 ALVKLPRNGEAPGAE-PAPSAWAPMELQVDVRVKPVGAAGGSSTPSPRPSTRFLKVPVPE 157
A V P +P A P P V +P A TP P++ VP PE
Sbjct: 1031 AAVPPPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPTPE-EPTSPAAAVPTPE 1089
Query: 158 SPAFSRHADPA-HQLLLRAPSQGGTWGRRSPLAAART--ESGCDAEGRASPAEGSAGSPG 214
P A P + A + SP AA T E A +P E + +P
Sbjct: 1090 EPTSPAAAVPTPEEPTSPAAAVPTPEEPASPAAAVPTPEEPASPAAAVPTPEEPAFPAPA 1149
Query: 215 SPT 217
PT
Sbjct: 1150 VPT 1152
Score = 42.0 bits (97), Expect = 0.001
Identities = 42/158 (26%), Positives = 55/158 (34%), Gaps = 21/158 (13%)
Query: 13 AGAELPMEPVG--SLVPTLEQPQVPAK-VRQPEGPESSPSPAGAVEKAAGAGLEPSSKKK 69
A P EP + VPT E+P PA V PE P S + E+ A + ++
Sbjct: 1083 AAVPTPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPASPAAAVPTPEEPASPAAAVPTPEE 1142
Query: 70 PPSPRPGSPRVPPLSLGYGVCPEPPSPGPALVKLPRNGEAPGAE-PAPSAWAPMELQVDV 128
P P P P PE + V P +P A P P+ A V
Sbjct: 1143 PAFPAPAVP-----------TPEESASAAVAVPTPEESASPAAAVPTPAESASFAAVVAT 1191
Query: 129 RVKPVGAAGGSSTPSPRPST------RFLKVPVPESPA 160
+P A TP+ +T VP E PA
Sbjct: 1192 LEEPTSPAASVPTPAAMVATLEEFTSPAASVPTSEEPA 1229
Score = 34.7 bits (78), Expect = 0.16
Identities = 58/207 (28%), Positives = 70/207 (33%), Gaps = 53/207 (25%)
Query: 13 AGAELPMEPVG--SLVPTLEQPQVPAK-VRQPEG----------PESSPSPAGAVE---K 56
A P EP + VPT E+P PA V PE PE S SPA AV +
Sbjct: 1122 AAVPTPEEPASPAAAVPTPEEPAFPAPAVPTPEESASAAVAVPTPEESASPAAAVPTPAE 1181
Query: 57 AAGAGLEPSSKKKPPSPRPGSPR-----------------VP----PLSLGYGVC--PEP 93
+A ++ ++P SP P VP P SL V EP
Sbjct: 1182 SASFAAVVATLEEPTSPAASVPTPAAMVATLEEFTSPAASVPTSEEPASLAAAVSNPEEP 1241
Query: 94 PSPGPAL------------VKLPRNGEAPGAE-PAPSAWAPMELQVDVRVKPVGAAGGSS 140
SP A+ V P +P A P P A V +P A
Sbjct: 1242 TSPAAAVPTLEEPTSSAAAVLTPEELSSPAASVPTPEEPASPAAAVSNLEEPASPAAAVP 1301
Query: 141 TPSPRPSTRFLKVPVPESPAFSRHADP 167
TP + VP PE PA A P
Sbjct: 1302 TPEV-AAIPAASVPTPEVPAIPAAAVP 1327
Score = 31.2 bits (69), Expect = 1.8
Identities = 26/78 (33%), Positives = 32/78 (41%), Gaps = 5/78 (6%)
Query: 9 PGGQAGAELPMEPVGS---LVPTLEQPQVPAKVRQPEGPESSPSPAGAVEKAAGAGLEPS 65
P A A L E + S VPT E+P PA E SPA AV A + +
Sbjct: 1254 PTSSAAAVLTPEELSSPAASVPTPEEPASPAAA--VSNLEEPASPAAAVPTPEVAAIPAA 1311
Query: 66 SKKKPPSPRPGSPRVPPL 83
S P P + VPP+
Sbjct: 1312 SVPTPEVPAIPAAAVPPM 1329
>gi|53832016 C-type lectin, superfamily member 14 isoform 2 [Homo
sapiens]
Length = 292
Score = 53.9 bits (128), Expect = 3e-07
Identities = 35/133 (26%), Positives = 56/133 (42%), Gaps = 24/133 (18%)
Query: 293 CPPGWVLSEEHCYYFSAEAQAWEASQAFCSAYHATLPLLS--HTQDFLGRYPVSRHSWVG 350
CP WV ++ CY+FS +W ++ +C +A L +++ Q+F+ +Y S ++W+G
Sbjct: 157 CPVNWVEHQDSCYWFSHSGMSWAEAEKYCQLKNAHLVVINSREEQNFVQKYLGSAYTWMG 216
Query: 351 AWRGPQGWHWIDEAPL--------PPQLLPED--------GEDNLDINCGALEEGTLVAA 394
W W+D P Q P+D GED + +G
Sbjct: 217 LSDPEGAWKWVDGTDYATGFQNWKPGQ--PDDWQGHGLGGGEDCAHFH----PDGRWNDD 270
Query: 395 NCSTPRPWVCAKG 407
C P WVC G
Sbjct: 271 VCQRPYHWVCEAG 283
>gi|4505501 oxidized low density lipoprotein (lectin-like) receptor
1 [Homo sapiens]
Length = 273
Score = 53.5 bits (127), Expect = 3e-07
Identities = 38/123 (30%), Positives = 55/123 (44%), Gaps = 9/123 (7%)
Query: 293 CPPGWVLSEEHCYYFSAEAQAWEASQAFCSAYHATLPLLSHTQDF-LGRYPVSRHS---W 348
CP W+ E+CY FS+ + WE SQ C + A L ++ T D + +S S W
Sbjct: 144 CPQDWIWHGENCYLFSSGSFNWEKSQEKCLSLDAKLLKINSTADLDFIQQAISYSSFPFW 203
Query: 349 VG-AWRGPQ-GWHWIDEAPLPPQLLPEDGEDNLDI---NCGALEEGTLVAANCSTPRPWV 403
+G + R P W W D +PL P L G + C ++ G + A NC +
Sbjct: 204 MGLSRRNPSYPWLWEDGSPLMPHLFRVRGAVSQTYPSGTCAYIQRGAVYAENCILAAFSI 263
Query: 404 CAK 406
C K
Sbjct: 264 CQK 266
>gi|223278347 C-type lectin domain family 4, member M isoform 9
[Homo sapiens]
Length = 353
Score = 52.8 bits (125), Expect = 6e-07
Identities = 36/127 (28%), Positives = 50/127 (39%), Gaps = 10/127 (7%)
Query: 290 CQQCPPGWVLSEEHCYYFSAEAQAWEASQAFCSAYHATLPLL--SHTQDFLGRYP--VSR 345
C+ CP W + +CY+ S + W S C A L ++ + Q+FL +R
Sbjct: 219 CRHCPKDWTFFQGNCYFMSNSQRNWHDSVTACQEVRAQLVVIKTAEEQNFLQLQTSRSNR 278
Query: 346 HSWVGAWRGPQ--GWHWIDEAPLPP--QLLPEDGEDNLDIN--CGALEEGTLVAANCSTP 399
SW+G Q W W+D +PL P Q GE N N C C
Sbjct: 279 FSWMGLSDLNQEGTWQWVDGSPLSPSFQRYWNSGEPNNSGNEDCAEFSGSGWNDNRCDVD 338
Query: 400 RPWVCAK 406
W+C K
Sbjct: 339 NYWICKK 345
>gi|223278339 C-type lectin domain family 4, member M isoform 7
[Homo sapiens]
Length = 263
Score = 52.8 bits (125), Expect = 6e-07
Identities = 36/127 (28%), Positives = 50/127 (39%), Gaps = 10/127 (7%)
Query: 290 CQQCPPGWVLSEEHCYYFSAEAQAWEASQAFCSAYHATLPLL--SHTQDFLGRYP--VSR 345
C+ CP W + +CY+ S + W S C A L ++ + Q+FL +R
Sbjct: 129 CRHCPKDWTFFQGNCYFMSNSQRNWHDSVTACQEVRAQLVVIKTAEEQNFLQLQTSRSNR 188
Query: 346 HSWVGAWRGPQ--GWHWIDEAPLPP--QLLPEDGEDNLDIN--CGALEEGTLVAANCSTP 399
SW+G Q W W+D +PL P Q GE N N C C
Sbjct: 189 FSWMGLSDLNQEGTWQWVDGSPLSPSFQRYWNSGEPNNSGNEDCAEFSGSGWNDNRCDVD 248
Query: 400 RPWVCAK 406
W+C K
Sbjct: 249 NYWICKK 255
>gi|223278337 C-type lectin domain family 4, member M isoform 12
[Homo sapiens]
Length = 375
Score = 52.8 bits (125), Expect = 6e-07
Identities = 36/127 (28%), Positives = 50/127 (39%), Gaps = 10/127 (7%)
Query: 290 CQQCPPGWVLSEEHCYYFSAEAQAWEASQAFCSAYHATLPLL--SHTQDFLGRYP--VSR 345
C+ CP W + +CY+ S + W S C A L ++ + Q+FL +R
Sbjct: 241 CRHCPKDWTFFQGNCYFMSNSQRNWHDSVTACQEVRAQLVVIKTAEEQNFLQLQTSRSNR 300
Query: 346 HSWVGAWRGPQ--GWHWIDEAPLPP--QLLPEDGEDNLDIN--CGALEEGTLVAANCSTP 399
SW+G Q W W+D +PL P Q GE N N C C
Sbjct: 301 FSWMGLSDLNQEGTWQWVDGSPLSPSFQRYWNSGEPNNSGNEDCAEFSGSGWNDNRCDVD 360
Query: 400 RPWVCAK 406
W+C K
Sbjct: 361 NYWICKK 367
>gi|223278335 C-type lectin domain family 4, member M isoform 2
[Homo sapiens]
Length = 348
Score = 52.8 bits (125), Expect = 6e-07
Identities = 36/127 (28%), Positives = 50/127 (39%), Gaps = 10/127 (7%)
Query: 290 CQQCPPGWVLSEEHCYYFSAEAQAWEASQAFCSAYHATLPLL--SHTQDFLGRYP--VSR 345
C+ CP W + +CY+ S + W S C A L ++ + Q+FL +R
Sbjct: 214 CRHCPKDWTFFQGNCYFMSNSQRNWHDSVTACQEVRAQLVVIKTAEEQNFLQLQTSRSNR 273
Query: 346 HSWVGAWRGPQ--GWHWIDEAPLPP--QLLPEDGEDNLDIN--CGALEEGTLVAANCSTP 399
SW+G Q W W+D +PL P Q GE N N C C
Sbjct: 274 FSWMGLSDLNQEGTWQWVDGSPLSPSFQRYWNSGEPNNSGNEDCAEFSGSGWNDNRCDVD 333
Query: 400 RPWVCAK 406
W+C K
Sbjct: 334 NYWICKK 340
>gi|223278350 C-type lectin domain family 4, member M isoform 8
[Homo sapiens]
Length = 376
Score = 52.8 bits (125), Expect = 6e-07
Identities = 36/127 (28%), Positives = 50/127 (39%), Gaps = 10/127 (7%)
Query: 290 CQQCPPGWVLSEEHCYYFSAEAQAWEASQAFCSAYHATLPLL--SHTQDFLGRYP--VSR 345
C+ CP W + +CY+ S + W S C A L ++ + Q+FL +R
Sbjct: 242 CRHCPKDWTFFQGNCYFMSNSQRNWHDSVTACQEVRAQLVVIKTAEEQNFLQLQTSRSNR 301
Query: 346 HSWVGAWRGPQ--GWHWIDEAPLPP--QLLPEDGEDNLDIN--CGALEEGTLVAANCSTP 399
SW+G Q W W+D +PL P Q GE N N C C
Sbjct: 302 FSWMGLSDLNQEGTWQWVDGSPLSPSFQRYWNSGEPNNSGNEDCAEFSGSGWNDNRCDVD 361
Query: 400 RPWVCAK 406
W+C K
Sbjct: 362 NYWICKK 368
>gi|223278342 C-type lectin domain family 4, member M isoform 11
[Homo sapiens]
Length = 332
Score = 52.8 bits (125), Expect = 6e-07
Identities = 36/127 (28%), Positives = 50/127 (39%), Gaps = 10/127 (7%)
Query: 290 CQQCPPGWVLSEEHCYYFSAEAQAWEASQAFCSAYHATLPLL--SHTQDFLGRYP--VSR 345
C+ CP W + +CY+ S + W S C A L ++ + Q+FL +R
Sbjct: 198 CRHCPKDWTFFQGNCYFMSNSQRNWHDSVTACQEVRAQLVVIKTAEEQNFLQLQTSRSNR 257
Query: 346 HSWVGAWRGPQ--GWHWIDEAPLPP--QLLPEDGEDNLDIN--CGALEEGTLVAANCSTP 399
SW+G Q W W+D +PL P Q GE N N C C
Sbjct: 258 FSWMGLSDLNQEGTWQWVDGSPLSPSFQRYWNSGEPNNSGNEDCAEFSGSGWNDNRCDVD 317
Query: 400 RPWVCAK 406
W+C K
Sbjct: 318 NYWICKK 324
>gi|42542390 C-type lectin domain family 4, member M isoform 1 [Homo
sapiens]
Length = 399
Score = 52.8 bits (125), Expect = 6e-07
Identities = 36/127 (28%), Positives = 50/127 (39%), Gaps = 10/127 (7%)
Query: 290 CQQCPPGWVLSEEHCYYFSAEAQAWEASQAFCSAYHATLPLL--SHTQDFLGRYP--VSR 345
C+ CP W + +CY+ S + W S C A L ++ + Q+FL +R
Sbjct: 265 CRHCPKDWTFFQGNCYFMSNSQRNWHDSVTACQEVRAQLVVIKTAEEQNFLQLQTSRSNR 324
Query: 346 HSWVGAWRGPQ--GWHWIDEAPLPP--QLLPEDGEDNLDIN--CGALEEGTLVAANCSTP 399
SW+G Q W W+D +PL P Q GE N N C C
Sbjct: 325 FSWMGLSDLNQEGTWQWVDGSPLSPSFQRYWNSGEPNNSGNEDCAEFSGSGWNDNRCDVD 384
Query: 400 RPWVCAK 406
W+C K
Sbjct: 385 NYWICKK 391
>gi|112734870 hypothetical protein LOC57648 [Homo sapiens]
Length = 1094
Score = 52.8 bits (125), Expect = 6e-07
Identities = 53/184 (28%), Positives = 69/184 (37%), Gaps = 25/184 (13%)
Query: 40 QPEGPESSP----SPAGAVEKAAGAGLEPSSKKKPPSPRPGSPRVPPLSLGYGVCPEPPS 95
+P GP SP SPA + A ++P PP P P P S G + P
Sbjct: 801 EPAGPSGSPELVSSPAASSSSATALQIQPPGSPDPP---PAPPAPAPASSAPGHVAKLPQ 857
Query: 96 PGPALVKLPRNGEAPGAEPAPSAWAPMELQVDVRVKPVGAAGGSSTPSPRPSTRFLKVPV 155
P V + G P + P LQ+ VR++ VGA GG+ TP+ PS
Sbjct: 858 KEP--VGCSKGGGPPREDVGAPLVTPSLLQM-VRLRSVGAPGGAPTPALGPS-------A 907
Query: 156 PESP---AFSRHADPAHQLLLRAPSQGGTWGRRSPLAAARTESGCDAEGRASPAEGSAGS 212
P+ P A S A P + APS G R + G + P E
Sbjct: 908 PQKPLRRALSGRASP-----VPAPSSGLHAAVRLKACSLAASEGLSSAQPNGPPEAEPRP 962
Query: 213 PGSP 216
P SP
Sbjct: 963 PQSP 966
Score = 42.0 bits (97), Expect = 0.001
Identities = 39/138 (28%), Positives = 50/138 (36%), Gaps = 12/138 (8%)
Query: 32 PQVPAKVR--QPEGPESSPSPAGAVEKAAGAGLEPSSKKKPPSPRPGSPRVPPLSLGYGV 89
P P K + +PE S SP +V + L SS PS R G + PL + +
Sbjct: 602 PASPGKAQPPKPERVTSLRSPGASVSSSL-TSLCSSSSDPAPSDRSGPQILTPLGDRFVI 660
Query: 90 CPEPPSPGPALVKLPRNGEAPGAEPAPSAWAPMELQVDVRVKPVGAAGGSSTPSPRPSTR 149
P P P P P +P+ AP V PV S P P T
Sbjct: 661 PPHPKVPAPF-------SPPPSKPRSPNPAAPALAAPAVVPGPVSTTDASPQSPPTPQTT 713
Query: 150 FLKVPVPESPAFSRHADP 167
P+ ESP S+ P
Sbjct: 714 L--TPLQESPVISKDQSP 729
Score = 40.4 bits (93), Expect = 0.003
Identities = 50/192 (26%), Positives = 71/192 (36%), Gaps = 25/192 (13%)
Query: 4 SWEAAPGGQAGAELPMEPVGSLVPTLEQPQVPAKVRQPEGPESSPSPAGAVEKAAGAGLE 63
S + AP ++G ++ + P+G P+VPA P SP+PA A
Sbjct: 637 SSDPAPSDRSGPQI-LTPLGDRFVIPPHPKVPAPFSPPPSKPRSPNPAAPALAAPAVVPG 695
Query: 64 P-----SSKKKPPSPRPGSPRV---PPLSLGYGVCPEPP---SPGPALVKLPR-NGEAPG 111
P +S + PP+P+ + P +S P PP P P K P EAP
Sbjct: 696 PVSTTDASPQSPPTPQTTLTPLQESPVISKDQSPPPSPPPSYHPPPPPTKKPEVVVEAPS 755
Query: 112 AE------------PAPSAWAPMELQVDVRVKPVGAAGGSSTPSPRPSTRFLKVPVPESP 159
A P P AP E + + P S SP P+ + SP
Sbjct: 756 ASETAEEPLQDPNWPPPPPPAPEEQDLSMADFPPPEEAFFSVASPEPAGPSGSPELVSSP 815
Query: 160 AFSRHADPAHQL 171
A S + A Q+
Sbjct: 816 AASSSSATALQI 827
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 52.4 bits (124), Expect = 7e-07
Identities = 60/223 (26%), Positives = 85/223 (38%), Gaps = 29/223 (13%)
Query: 24 SLVPTLEQPQVPAKVRQPE---GPESSPSPAGAVEKAAGAGLEPSSKKKPPSPRPGSPRV 80
+L+P L +P P V Q G + P+PA AA A P++ PP P P +
Sbjct: 224 ALLP-LPKPAAPGTVIQTPPFVGAAAPPAPAAPSPPAAPAPAAPAAAPPPPPPAPATLAR 282
Query: 81 PPLSLGYGVCPEPPSPGPALVKLPRNGEAPGAEPAPSAWAPMELQVDVRVKPVGAAGGSS 140
PP G+ P +P +NG + GA PAP+ A G AG S
Sbjct: 283 PP---GHPAGPPTAAPAVPPPAAAQNGGSAGAAPAPAPAAG------------GPAGVSG 327
Query: 141 TPSPRPSTRFLKVPVPESPAFSRHADPAHQLLLRAPSQGGTWGRRSPLA-AARTESGCDA 199
P P + +PA A+ +++ AP T P + AA G
Sbjct: 328 QPGPGAAA--------AAPAPGVKAESPKRVVQAAPPAAQTLAASGPASTAASMVIGPTM 379
Query: 200 EGR-ASPAEGSAGSPGSPTCCRCKELGLEKEDAALLPRAGLDG 241
+G SPA +PG+PT G + + P A G
Sbjct: 380 QGALPSPAAVPPPAPGTPTGLPKGAAGAVTQSLSRTPTATTSG 422
Score = 44.7 bits (104), Expect = 2e-04
Identities = 56/217 (25%), Positives = 72/217 (33%), Gaps = 24/217 (11%)
Query: 8 APGGQAGAELPMEPVGSLVPTLEQPQVPAKVRQPEGPESSPSPAGAVEKAAGAGLEPSSK 67
+P G AGA P P +P + R G P P AG P +
Sbjct: 66 SPAGAAGAG-PAAPAEGAPGAAPEPPPAGRARPGGGGPQRPGPPSPRRPLVPAGPAPPAA 124
Query: 68 KK--PPSPRPGSPRVPPLSLGYGVCPEPPSPGPALVKLP-----RNGEAPGAEPAPSAWA 120
K PP GS P + PEP GPA P R G PG P P
Sbjct: 125 KLRPPPEGSAGSCAPVPAAAAVAAGPEPAPAGPAKPAGPAALAARAGPGPGPGPGPGPGP 184
Query: 121 PMELQVDVRVKPVGAAGGSSTPSPRPSTRFLKVPVPESPAFSR-HADPAHQLLLRAPSQG 179
P AG + + S L +PA S + PA L L P+
Sbjct: 185 ----------GPGKPAGPGAAQTLNGSAALLNSHHAAAPAVSLVNNGPAALLPLPKPAAP 234
Query: 180 GTWGRRSPLAAARTESGCDAEGRASPAEGSAGSPGSP 216
GT + P A A+P+ +A +P +P
Sbjct: 235 GTVIQTPPFVGAAA-----PPAPAAPSPPAAPAPAAP 266
Score = 37.0 bits (84), Expect = 0.032
Identities = 62/254 (24%), Positives = 86/254 (33%), Gaps = 59/254 (23%)
Query: 7 AAPGGQAGAELPMEPVGSLVPTLEQPQVPAKVRQPEG-PESSPSPAGAVEKAAGAGLEPS 65
AAP A A P P P PA + +P G P P+ A AV A A S
Sbjct: 259 AAPAPAAPAAAPPPP----------PPAPATLARPPGHPAGPPTAAPAVPPPAAAQNGGS 308
Query: 66 SKKKP-PSPRPGSPRVPPLSLGYGVCPEPPSPG--------------PALVKLPRNGEA- 109
+ P P+P G P G G P+PG PA L +G A
Sbjct: 309 AGAAPAPAPAAGGPAGVSGQPGPGAAAAAPAPGVKAESPKRVVQAAPPAAQTLAASGPAS 368
Query: 110 -----------PGAEPAPSAWAPMELQVDVRVKPVGAAGG---SSTPSPRPSTRFLKVPV 155
GA P+P+A P + P GAAG S + +P +T ++ +
Sbjct: 369 TAASMVIGPTMQGALPSPAAVPPPAPGTPTGL-PKGAAGAVTQSLSRTPTATTSGIRATL 427
Query: 156 PESPAFSRHADPAHQLLLRAPSQGGTWGRRSPLAAARTESG------------CDAEGRA 203
+ R P P+ + + R+E+G A+ A
Sbjct: 428 TPTVLAPRLPQPPQN-----PTNIQNFQLPPGMVLVRSENGQLLMIPQQALAQMQAQAHA 482
Query: 204 SPAEGSAGSPGSPT 217
P A P +PT
Sbjct: 483 QPQTTMAPRPATPT 496
Score = 33.5 bits (75), Expect = 0.36
Identities = 47/185 (25%), Positives = 62/185 (33%), Gaps = 44/185 (23%)
Query: 15 AELPMEPVGSLVPTLEQPQVPAKVRQ----PEGPESSPSPAGAVEK---------AAGAG 61
+E+ + V LV +LE + P PE + AGA+ AAGAG
Sbjct: 15 SEVDEKVVSDLVGSLESQLAASAAHHHHLAPRTPEVRAAAAGALGNHVVSGSPAGAAGAG 74
Query: 62 LEPSSKKKPPSPRPGSPRVPPLSLGYGVCPEPPSPGPALVKLPRNGEAPGAEPAPSA--- 118
P +P G+P G PEPP G A R G P P +
Sbjct: 75 --------PAAPAEGAP---------GAAPEPPPAGRA-----RPGGGGPQRPGPPSPRR 112
Query: 119 ----WAPMELQVDVRVKPVGAAGGSSTPSPRPSTRFLKVPVPESPAFSRHADPAHQLLLR 174
P +R P G+AG + + P P PA + A PA
Sbjct: 113 PLVPAGPAPPAAKLRPPPEGSAGSCAPVPAAAAVAAGPEPAPAGPA--KPAGPAALAARA 170
Query: 175 APSQG 179
P G
Sbjct: 171 GPGPG 175
>gi|195222725 C-type lectin domain family 2, member A [Homo sapiens]
Length = 174
Score = 52.4 bits (124), Expect = 7e-07
Identities = 31/103 (30%), Positives = 51/103 (49%), Gaps = 5/103 (4%)
Query: 263 WALAFMAVL-LAVSGVVIVVLASRAG-ARCQQCPPGWVLSEEHCYYFSAEAQAWEASQAF 320
W + M L + ++ V I+++A+ + A+ C W+ + C+YFS + + W AS+ F
Sbjct: 26 WKIGLMCFLSIIITTVCIIMIATWSKHAKPVACSGDWLGVRDKCFYFSDDTRNWTASKIF 85
Query: 321 CSAYHATLPLLSHTQD--FLGRYPVSRHSWVGAWRGP-QGWHW 360
CS A L + +D FL RY + W+G R W W
Sbjct: 86 CSLQKAELAQIDTQEDMEFLKRYAGTDMHWIGLSRKQGDSWKW 128
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.132 0.425
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,467,419
Number of Sequences: 37866
Number of extensions: 1510902
Number of successful extensions: 13116
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 296
Number of HSP's successfully gapped in prelim test: 1432
Number of HSP's that attempted gapping in prelim test: 7971
Number of HSP's gapped (non-prelim): 4603
length of query: 409
length of database: 18,247,518
effective HSP length: 105
effective length of query: 304
effective length of database: 14,271,588
effective search space: 4338562752
effective search space used: 4338562752
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.