Guide to the Human Genome
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Name: KLRC1 Sequence: fasta or formatted (215aa) NCBI GI: 47717092
Description:

killer cell lectin-like receptor subfamily C, member 1 isoform NKG2-B

Referenced in:

Lectin Families

Other entries for this name:
alt prot [233aa] killer cell lectin-like receptor subfamily C, member 1 isoform NK...
alt prot [233aa] killer cell lectin-like receptor subfamily C, member 1 isoform NK...
alt mRNA [215aa] killer cell lectin-like receptor subfamily C, member 1 isoform NK...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.7         10           1
 C cysteine            4.2          9           1
 D aspartate           3.7          8           1
 E glutamate           6.5         14           3
 F phenylalanine       1.9          4           1
 G glycine             4.7         10           1
 H histidine           3.7          8           2
 I isoleucine          8.8         19           2
 K lysine              7.4         16           1
 L leucine             9.3         20           2
 M methionine          1.9          4           1
 N asparagine          6.5         14           1
 P proline             4.7         10           2
 Q glutamine           4.2          9           2
 R arginine            3.3          7           2
 S serine             11.2         24           2
 T threonine           3.7          8           1
 V valine              4.7         10           2
 W tryptophan          1.9          4           1
 Y tyrosine            3.3          7           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   killer cell lectin-like receptor subfamily C, member... 
KLRC1                 1.000   killer cell lectin-like receptor subfamily C, member ...
KLRC1                 0.971   killer cell lectin-like receptor subfamily C, member...
KLRC1                 0.971   killer cell lectin-like receptor subfamily C, member ...
KLRC2                 0.743   killer cell lectin-like receptor subfamily C, member...
KLRC3                 0.632   killer cell lectin-like receptor subfamily C, member...
KLRC3                 0.632   killer cell lectin-like receptor subfamily C, member...
KLRC4                 0.349   killer cell lectin-like receptor subfamily C, member ...
KLRD1                 0.140   killer cell lectin-like receptor subfamily D, membe...
KLRD1                 0.140   killer cell lectin-like receptor subfamily D, member ...
KLRD1                 0.121   killer cell lectin-like receptor subfamily D, member ...
CLEC7A                0.119   dendritic cell-associated C-type lectin 1 isoform b ...
KLRG1                 0.112   killer cell lectin-like receptor subfamily G, member...
KLRG2                 0.109   killer cell lectin-like receptor subfamily G, member...
CLEC12B               0.109   C-type lectin domain family 12, member B isoform 1 ...
CD69                  0.105   CD69 molecule 
KLRK1                 0.102   NKG2-D type II integral membrane protein 
CLEC2B                0.095   C-type lectin, superfamily member 2 
CLEC2L                0.095   C-type lectin domain family 2, member L 
CLEC1B                0.093   C-type lectin domain family 1, member B isoform b [...
CLEC1B                0.093   C-type lectin domain family 1, member B isoform a [...
CLEC1A                0.093   C-type lectin-like receptor-1 
CLEC12A               0.088   myeloid inhibitory C-type lectin-like receptor isofo...
CLEC12A               0.088   myeloid inhibitory C-type lectin-like receptor isofo...
CLEC7A                0.083   dendritic cell-associated C-type lectin 1 isoform e ...
CLEC7A                0.083   dendritic cell-associated C-type lectin 1 isoform a ...
CLEC12B               0.083   C-type lectin domain family 12, member B isoform 2 ...
CD209                 0.083   CD209 molecule isoform 8 
CD209                 0.083   CD209 molecule isoform 3 
CD209                 0.083   CD209 molecule isoform 7 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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