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Search of human proteins with 38348310
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|38348310 hypothetical protein LOC341032 [Homo sapiens]
(236 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|38348310 hypothetical protein LOC341032 [Homo sapiens] 504 e-143
gi|239755589 PREDICTED: hypothetical protein [Homo sapiens] 44 2e-04
gi|27436925 synoviolin 1 isoform a [Homo sapiens] 42 4e-04
gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2 ... 42 4e-04
gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1 ... 42 4e-04
gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3 ... 42 4e-04
gi|27436927 synoviolin 1 isoform b [Homo sapiens] 42 5e-04
gi|222352122 hypothetical protein LOC284297 [Homo sapiens] 38 0.009
gi|73808090 zinc finger protein 207 isoform b [Homo sapiens] 38 0.009
gi|224994221 SH3-domain binding protein 2 isoform b [Homo sapiens] 37 0.015
gi|224994219 SH3-domain binding protein 2 isoform c [Homo sapiens] 37 0.015
gi|116008152 alpha 1 type XV collagen precursor [Homo sapiens] 37 0.015
gi|119395760 diaphanous 1 isoform 2 [Homo sapiens] 37 0.015
gi|119395758 diaphanous 1 isoform 1 [Homo sapiens] 37 0.015
gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens] 37 0.015
gi|170014705 SH3-domain binding protein 2 isoform a [Homo sapiens] 37 0.015
gi|170014703 SH3-domain binding protein 2 isoform a [Homo sapiens] 37 0.015
gi|217416343 fibrosin-like 1 [Homo sapiens] 37 0.019
gi|154426272 hypothetical protein LOC54540 [Homo sapiens] 37 0.019
gi|163965366 nascent polypeptide-associated complex alpha subuni... 37 0.019
gi|210032580 SET domain containing 1B [Homo sapiens] 36 0.033
gi|53831997 suppressor of cytokine signaling 7 [Homo sapiens] 36 0.033
gi|154689780 son of sevenless homolog 2 [Homo sapiens] 35 0.043
gi|164565408 common-site lymphoma/leukemia guanine nucleotide ex... 35 0.043
gi|239755450 PREDICTED: hypothetical protein [Homo sapiens] 35 0.056
gi|239749929 PREDICTED: hypothetical protein [Homo sapiens] 35 0.056
gi|239744238 PREDICTED: hypothetical protein [Homo sapiens] 35 0.056
gi|218156340 chapsyn-110 isoform 3 [Homo sapiens] 35 0.056
gi|239753123 PREDICTED: kelch-like 29 (Drosophila) [Homo sapiens] 35 0.073
gi|239747686 PREDICTED: kelch-like 29 (Drosophila) [Homo sapiens] 35 0.073
>gi|38348310 hypothetical protein LOC341032 [Homo sapiens]
Length = 236
Score = 504 bits (1298), Expect = e-143
Identities = 236/236 (100%), Positives = 236/236 (100%)
Query: 1 MPGSPVTSGYYGVRRSFLSDSDFHNSKQFSNDVYTSSVGKPFPCESSAGQSHAALLEPYF 60
MPGSPVTSGYYGVRRSFLSDSDFHNSKQFSNDVYTSSVGKPFPCESSAGQSHAALLEPYF
Sbjct: 1 MPGSPVTSGYYGVRRSFLSDSDFHNSKQFSNDVYTSSVGKPFPCESSAGQSHAALLEPYF 60
Query: 61 PQEPYGDYRPPALTPNAGSLFSASPLPPLLPPPFPGDPAHFLFRDSWEQTLPDGLSQPDP 120
PQEPYGDYRPPALTPNAGSLFSASPLPPLLPPPFPGDPAHFLFRDSWEQTLPDGLSQPDP
Sbjct: 61 PQEPYGDYRPPALTPNAGSLFSASPLPPLLPPPFPGDPAHFLFRDSWEQTLPDGLSQPDP 120
Query: 121 VSADALLTLPPSTSCLSQLESGSIAQHRGSSWGSSLAGAQSYSLHALEDLHHTPGYPTPP 180
VSADALLTLPPSTSCLSQLESGSIAQHRGSSWGSSLAGAQSYSLHALEDLHHTPGYPTPP
Sbjct: 121 VSADALLTLPPSTSCLSQLESGSIAQHRGSSWGSSLAGAQSYSLHALEDLHHTPGYPTPP 180
Query: 181 PYPFTPFMTVSNDLPPKVGPLSPDEEADTGSLHDPSPWVKEDGSIAWGSYECRRAY 236
PYPFTPFMTVSNDLPPKVGPLSPDEEADTGSLHDPSPWVKEDGSIAWGSYECRRAY
Sbjct: 181 PYPFTPFMTVSNDLPPKVGPLSPDEEADTGSLHDPSPWVKEDGSIAWGSYECRRAY 236
>gi|239755589 PREDICTED: hypothetical protein [Homo sapiens]
Length = 356
Score = 43.5 bits (101), Expect = 2e-04
Identities = 44/149 (29%), Positives = 54/149 (36%), Gaps = 21/149 (14%)
Query: 82 SASPLPPLLPPPFPGDPAHFLFR-DSWEQTLPDGLSQPDPVSADALLTLPPSTSCLSQLE 140
S+ P PPL PPP PG P SW+ P G S P L S S E
Sbjct: 185 SSPPAPPLPPPPKPGSPTQRAREASSWK---PPGHSHTAPPGRGTQRPLTQRHSSESSSE 241
Query: 141 SGSIAQHRGSSWGSSLAGAQSYSLHALEDLHHTPGYPTPPPYPFTPFMTVSNDLPPKVGP 200
S A G+ W S+L +PG P P P P S LP + G
Sbjct: 242 LSSSA-WPGTIWTSTL----------------SPGQRLPTPPPPDPAALTSWGLPQQQGA 284
Query: 201 LSPDEEADTGSLHDPSPWVKEDGSIAWGS 229
P+ A PW +++ S GS
Sbjct: 285 CVPEGIALALRCRAMGPWEEQNWSATSGS 313
>gi|27436925 synoviolin 1 isoform a [Homo sapiens]
Length = 616
Score = 42.4 bits (98), Expect = 4e-04
Identities = 48/152 (31%), Positives = 63/152 (41%), Gaps = 16/152 (10%)
Query: 61 PQEPYGDYRPPALTPNAGSLFSASP-LPPLLPPPFPGDPAHFLFRDSWEQTLPDGLSQPD 119
P EP PPA P+ L P P L PPFP P F W P P
Sbjct: 345 PPEPADQGPPPA--PHPPPLLPQPPNFPQGLLPPFP--PGMFPL---WPPMGPFPPVPPP 397
Query: 120 PVSADALLTLPPSTSC-LSQLESGSIAQHRGSSWGSSLAGAQSYSLHALEDLHHTPGYPT 178
P S +A+ PPSTS LS+ + G+S ++ A A + + PG+P
Sbjct: 398 PSSGEAVA--PPSTSAALSRPSGAATTTAAGTSATAASATASGPGSGSAPEAGPAPGFPF 455
Query: 179 PPPY---PF-TPFMTVSNDLPPK-VGPLSPDE 205
PPP+ P PF +PP L+P+E
Sbjct: 456 PPPWMGMPLPPPFAFPPMPVPPAGFAGLTPEE 487
>gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2
[Homo sapiens]
Length = 2191
Score = 42.4 bits (98), Expect = 4e-04
Identities = 56/200 (28%), Positives = 75/200 (37%), Gaps = 46/200 (23%)
Query: 57 EPYFPQEPYGDYRPPALTPNAGSLFSAS-----PLPPLL---------PPPFPGDPAHF- 101
+PY+ Q+P +PP L P A L S S P + PP PG P H
Sbjct: 553 QPYYSQQP----QPPHLPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNHED 608
Query: 102 --LFRDSWEQTLPDGLSQPDPVSADALLTLPPSTSCLSQLESGSIAQHRGSSWGSSLAGA 159
L + +LPD D + TL + S SGS SS G A
Sbjct: 609 LNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSA-----SGST-----SSQGDQSNPA 658
Query: 160 QS-YSLHALEDLHHTPGYPTPPPY------------PFTPFMTVSNDLPPKVGPLSPDEE 206
QS +S HA L PG P+P P P +P + +PP+ P E
Sbjct: 659 QSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQ--PPGSQSE 716
Query: 207 ADTGSLHDPSPWVKEDGSIA 226
+ + SP +E G +A
Sbjct: 717 SSSHPALSQSPMPQERGFMA 736
>gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1
[Homo sapiens]
Length = 2231
Score = 42.4 bits (98), Expect = 4e-04
Identities = 56/200 (28%), Positives = 75/200 (37%), Gaps = 46/200 (23%)
Query: 57 EPYFPQEPYGDYRPPALTPNAGSLFSAS-----PLPPLL---------PPPFPGDPAHF- 101
+PY+ Q+P +PP L P A L S S P + PP PG P H
Sbjct: 540 QPYYSQQP----QPPHLPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNHED 595
Query: 102 --LFRDSWEQTLPDGLSQPDPVSADALLTLPPSTSCLSQLESGSIAQHRGSSWGSSLAGA 159
L + +LPD D + TL + S SGS SS G A
Sbjct: 596 LNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSA-----SGST-----SSQGDQSNPA 645
Query: 160 QS-YSLHALEDLHHTPGYPTPPPY------------PFTPFMTVSNDLPPKVGPLSPDEE 206
QS +S HA L PG P+P P P +P + +PP+ P E
Sbjct: 646 QSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQ--PPGSQSE 703
Query: 207 ADTGSLHDPSPWVKEDGSIA 226
+ + SP +E G +A
Sbjct: 704 SSSHPALSQSPMPQERGFMA 723
>gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3
[Homo sapiens]
Length = 2178
Score = 42.4 bits (98), Expect = 4e-04
Identities = 56/200 (28%), Positives = 75/200 (37%), Gaps = 46/200 (23%)
Query: 57 EPYFPQEPYGDYRPPALTPNAGSLFSAS-----PLPPLL---------PPPFPGDPAHF- 101
+PY+ Q+P +PP L P A L S S P + PP PG P H
Sbjct: 540 QPYYSQQP----QPPHLPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNHED 595
Query: 102 --LFRDSWEQTLPDGLSQPDPVSADALLTLPPSTSCLSQLESGSIAQHRGSSWGSSLAGA 159
L + +LPD D + TL + S SGS SS G A
Sbjct: 596 LNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSA-----SGST-----SSQGDQSNPA 645
Query: 160 QS-YSLHALEDLHHTPGYPTPPPY------------PFTPFMTVSNDLPPKVGPLSPDEE 206
QS +S HA L PG P+P P P +P + +PP+ P E
Sbjct: 646 QSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQ--PPGSQSE 703
Query: 207 ADTGSLHDPSPWVKEDGSIA 226
+ + SP +E G +A
Sbjct: 704 SSSHPALSQSPMPQERGFMA 723
>gi|27436927 synoviolin 1 isoform b [Homo sapiens]
Length = 617
Score = 42.0 bits (97), Expect = 5e-04
Identities = 48/153 (31%), Positives = 63/153 (41%), Gaps = 17/153 (11%)
Query: 61 PQEPYGDYRPPALTPNAGSLFSASP-LPPLLPPPFPGDPAHFLFRDSWEQTLPDGLSQPD 119
P EP PPA P+ L P P L PPFP P F W P P
Sbjct: 345 PPEPADQGPPPA--PHPPPLLPQPPNFPQGLLPPFP--PGMFPL---WPPMGPFPPVPPP 397
Query: 120 PVSADALLTLPPSTSC--LSQLESGSIAQHRGSSWGSSLAGAQSYSLHALEDLHHTPGYP 177
P S +A+ PPSTS LS+ + G+S ++ A A + + PG+P
Sbjct: 398 PSSGEAVA--PPSTSAAALSRPSGAATTTAAGTSATAASATASGPGSGSAPEAGPAPGFP 455
Query: 178 TPPPY---PF-TPFMTVSNDLPPK-VGPLSPDE 205
PPP+ P PF +PP L+P+E
Sbjct: 456 FPPPWMGMPLPPPFAFPPMPVPPAGFAGLTPEE 488
>gi|222352122 hypothetical protein LOC284297 [Homo sapiens]
Length = 1573
Score = 37.7 bits (86), Expect = 0.009
Identities = 47/163 (28%), Positives = 67/163 (41%), Gaps = 20/163 (12%)
Query: 61 PQEPYGDYRPPALTPNAGSLFSASPLPPLLPPPFPGDPAHFLFRDSWEQTLPDGLSQPDP 120
P++P+ + RPP + +A P P P PG P L DS + P +
Sbjct: 985 PRKPWPERRPP----RPAATRTAPPTPSPGPSASPGPPGPALTSDSSRELTPHSALTSEA 1040
Query: 121 VSADALLTLPPSTSCLSQLESGSIAQHRGSSWGSSLAGAQSYSLHALEDLHHTPGYPTPP 180
S DA T PP+ S+ I +S +L+ S + AL TP P+P
Sbjct: 1041 TS-DAPDTSPPTPDPASRTNPDLIL----TSPDFALSTPDSSVVPAL-----TP-EPSPT 1089
Query: 181 PYPFTP-FMTVSNDLPPKVGPLSPDE----EADTGSLHDPSPW 218
P P P +T P +V LSP E+DT D +P+
Sbjct: 1090 PLPTLPKELTSDPSTPSEVTSLSPTSEQVPESDTTPDLDTTPY 1132
>gi|73808090 zinc finger protein 207 isoform b [Homo sapiens]
Length = 463
Score = 37.7 bits (86), Expect = 0.009
Identities = 45/206 (21%), Positives = 70/206 (33%), Gaps = 43/206 (20%)
Query: 25 NSKQFSNDVYTSSVG-KPFPCESSAGQSHAALLEPYFPQEPYGDYRPPALTPNAGSLFSA 83
+S ++ +D +S +P P + G + +P P P PP + P +
Sbjct: 112 DSDEYDDDDSAASTSFQPQPVQPQQGYI-PPMAQPGLPPVPGAPGMPPGIPP---LMPGV 167
Query: 84 SPLPPLLPPPFPGDPAHFLFRDSWEQT--------------------------LPDGLSQ 117
PL P +PP PG P + + Q+ +P G+
Sbjct: 168 PPLMPGMPPVMPGMPPGLHHQRKYTQSFCGENIMMPMGGMMPPGPGIPPLMPGMPPGMPP 227
Query: 118 PDP------------VSADALLTLPPSTSCLSQLESGSIAQHRGSSWGSSLAGAQSYSLH 165
P P VSA +L PP+ + + + S G + A Q
Sbjct: 228 PVPRPGIPPMTQAQAVSAPGILNRPPAPTATVPAPQPPVTKPLFPSAGQAQAAVQGPVGT 287
Query: 166 ALEDLHHTPGYPTPPPYPFTPFMTVS 191
+ L+ TP T PP P P T S
Sbjct: 288 DFKPLNSTPATTTEPPKPTFPAYTQS 313
>gi|224994221 SH3-domain binding protein 2 isoform b [Homo sapiens]
Length = 618
Score = 37.0 bits (84), Expect = 0.015
Identities = 54/188 (28%), Positives = 74/188 (39%), Gaps = 37/188 (19%)
Query: 43 PCESSAGQSHAALLEP-YFPQEPYGDYRPPALT--PNAGSLFSASPLPPLLPPPFPGDPA 99
P G+ AL+ P +P P R PA + P A S S P P L PPP P
Sbjct: 243 PDSPEPGRLEDALMHPPAYPPPPVPTPRKPAFSDMPRAHSFTSKGPGPLLPPPP----PK 298
Query: 100 HFL------FRDSWEQTLPDGLSQPDP--------VSADALLTLPPSTS-----CLSQLE 140
H L DS L ++P P +S L T+P + C +
Sbjct: 299 HGLPDVGLAAEDSKRDPLCPRRAEPCPRVPATPRRMSDPPLSTMPTAPGLRKPPCFRESA 358
Query: 141 SGS----IAQHRGSSWGSS--LAGAQSYSLHALEDLHHTP-GYPT--PPPYPFT--PFMT 189
S S H S S+ +A A S + L+ H +P G PT PPP P F+
Sbjct: 359 SPSPEPWTPGHGACSTSSAAIMATATSRNCDKLKSFHLSPRGPPTSEPPPVPANKPKFLK 418
Query: 190 VSNDLPPK 197
++ + PP+
Sbjct: 419 IAEEDPPR 426
>gi|224994219 SH3-domain binding protein 2 isoform c [Homo sapiens]
Length = 589
Score = 37.0 bits (84), Expect = 0.015
Identities = 54/188 (28%), Positives = 74/188 (39%), Gaps = 37/188 (19%)
Query: 43 PCESSAGQSHAALLEP-YFPQEPYGDYRPPALT--PNAGSLFSASPLPPLLPPPFPGDPA 99
P G+ AL+ P +P P R PA + P A S S P P L PPP P
Sbjct: 214 PDSPEPGRLEDALMHPPAYPPPPVPTPRKPAFSDMPRAHSFTSKGPGPLLPPPP----PK 269
Query: 100 HFL------FRDSWEQTLPDGLSQPDP--------VSADALLTLPPSTS-----CLSQLE 140
H L DS L ++P P +S L T+P + C +
Sbjct: 270 HGLPDVGLAAEDSKRDPLCPRRAEPCPRVPATPRRMSDPPLSTMPTAPGLRKPPCFRESA 329
Query: 141 SGS----IAQHRGSSWGSS--LAGAQSYSLHALEDLHHTP-GYPT--PPPYPFT--PFMT 189
S S H S S+ +A A S + L+ H +P G PT PPP P F+
Sbjct: 330 SPSPEPWTPGHGACSTSSAAIMATATSRNCDKLKSFHLSPRGPPTSEPPPVPANKPKFLK 389
Query: 190 VSNDLPPK 197
++ + PP+
Sbjct: 390 IAEEDPPR 397
>gi|116008152 alpha 1 type XV collagen precursor [Homo sapiens]
Length = 1388
Score = 37.0 bits (84), Expect = 0.015
Identities = 42/151 (27%), Positives = 54/151 (35%), Gaps = 19/151 (12%)
Query: 77 AGSLFSASPLPPLLPPPFPG-DPAHFLFRDSWEQTLPDGLSQPDPVSADALLTLP--PST 133
AG S SP P P P P P ++ E G + P DA LP P
Sbjct: 521 AGGEESGSPPPDGPPLPLPTVAPERWITPAQREHVGMKGQAGPKGEKGDAGEELPGPPEP 580
Query: 134 SCLSQLESGSIAQHRGSSWGSSLAGAQSYSLHALEDLHHTPGYPTPPPYPFTPFMTVSND 193
S +G+ A+ G WGS + + + + L PG P PP P
Sbjct: 581 SGPVGPTAGAEAEGSGLGWGSDVGSGSGDLVGSEQLLRGPPGPPGPPGLP---------G 631
Query: 194 LPPKVG-------PLSPDEEADTGSLHDPSP 217
+P K G P SP E+ G P P
Sbjct: 632 IPGKPGTDVFMGPPGSPGEDGPAGEPGPPGP 662
>gi|119395760 diaphanous 1 isoform 2 [Homo sapiens]
Length = 1263
Score = 37.0 bits (84), Expect = 0.015
Identities = 41/138 (29%), Positives = 51/138 (36%), Gaps = 25/138 (18%)
Query: 66 GDYRPPALTPNAGSLFSASPLPPLLPPPFPGDPAHFLFRDSWEQTLPDG--LSQPDPVSA 123
G PP P + P PP PPP PG S +LP G +S P P+S
Sbjct: 584 GTIIPPPPAPGDSTTPPPPPPPPPPPPPLPGGVC-----ISSPPSLPGGTAISPPPPLSG 638
Query: 124 DALLTLPPSTSCLSQLESGSIAQHRGSSWGSSLAGAQSYSLHALEDLHHTPGYPTPPPYP 183
DA + PP + + G SSL G A+ PG PP P
Sbjct: 639 DATIPPPP-----------PLPEGVGIPSPSSLPGGT-----AIPPPPPLPGSARIPPPP 682
Query: 184 FTPFMTVSNDLPPKVGPL 201
P + S +PP PL
Sbjct: 683 --PPLPGSAGIPPPPPPL 698
Score = 28.1 bits (61), Expect = 6.9
Identities = 19/53 (35%), Positives = 21/53 (39%), Gaps = 7/53 (13%)
Query: 53 AALLEPYFPQEPYGDYRPPALTPNAGSLFSASPLPPLL-------PPPFPGDP 98
+A + P P P PP P G P PPL PPPFPG P
Sbjct: 675 SARIPPPPPPLPGSAGIPPPPPPLPGEAGMPPPPPPLPGGPGIPPPPPFPGGP 727
>gi|119395758 diaphanous 1 isoform 1 [Homo sapiens]
Length = 1272
Score = 37.0 bits (84), Expect = 0.015
Identities = 41/138 (29%), Positives = 51/138 (36%), Gaps = 25/138 (18%)
Query: 66 GDYRPPALTPNAGSLFSASPLPPLLPPPFPGDPAHFLFRDSWEQTLPDG--LSQPDPVSA 123
G PP P + P PP PPP PG S +LP G +S P P+S
Sbjct: 593 GTIIPPPPAPGDSTTPPPPPPPPPPPPPLPGGVC-----ISSPPSLPGGTAISPPPPLSG 647
Query: 124 DALLTLPPSTSCLSQLESGSIAQHRGSSWGSSLAGAQSYSLHALEDLHHTPGYPTPPPYP 183
DA + PP + + G SSL G A+ PG PP P
Sbjct: 648 DATIPPPP-----------PLPEGVGIPSPSSLPGGT-----AIPPPPPLPGSARIPPPP 691
Query: 184 FTPFMTVSNDLPPKVGPL 201
P + S +PP PL
Sbjct: 692 --PPLPGSAGIPPPPPPL 707
Score = 28.1 bits (61), Expect = 6.9
Identities = 19/53 (35%), Positives = 21/53 (39%), Gaps = 7/53 (13%)
Query: 53 AALLEPYFPQEPYGDYRPPALTPNAGSLFSASPLPPLL-------PPPFPGDP 98
+A + P P P PP P G P PPL PPPFPG P
Sbjct: 684 SARIPPPPPPLPGSAGIPPPPPPLPGEAGMPPPPPPLPGGPGIPPPPPFPGGP 736
>gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens]
Length = 1682
Score = 37.0 bits (84), Expect = 0.015
Identities = 51/189 (26%), Positives = 64/189 (33%), Gaps = 27/189 (14%)
Query: 58 PYFPQEPYGDYRPPALTPNAGSLFSASPLPPLLPPPFPGDPAHFLFRDSWEQTLPDGLSQ 117
P + P G PA P G + LP P P L +++ D S
Sbjct: 318 PAYTAHPPGHRLVPAAPPGPGPRPPGAESHGCLPATRP--PGSDLRESRVQRSRMD--SS 373
Query: 118 PDPVSADALLTLPPS-------TSCLSQLESGSIAQHRGSSWGSSLAGAQSYSLHALEDL 170
P + A + PS T+ S S S RG + GA Y ALE
Sbjct: 374 VSPAATTACVPYAPSRPPGLPGTTTSSSSSSSSNTGLRGVEPNPGIPGADHYQTPALEVS 433
Query: 171 HH----TPGYPTPPPYPFTPFMTVSNDLPPKVGPLSPDEEADTGSLHDPSP--WVK---- 220
HH + + P+ P T LPP GP SP L P P W+K
Sbjct: 434 HHGRLGPSAHSSRKPFLGAPAATPHLSLPP--GPSSPPPPPCPRLLRPPPPPAWLKGPAC 491
Query: 221 ----EDGSI 225
EDG I
Sbjct: 492 RAAREDGEI 500
Score = 33.5 bits (75), Expect = 0.16
Identities = 52/206 (25%), Positives = 67/206 (32%), Gaps = 44/206 (21%)
Query: 70 PPALTPNAGSLFSASPLPPLLPPPFPGDPAHFL-------------FRDSWEQT------ 110
PPAL P P P PPP P PA L +R +
Sbjct: 772 PPALPPPPPLAKFPPPSQPQPPPPPPPSPASLLKSLASVLEGQKYCYRGTGAAVSTRPGP 831
Query: 111 LPDGLSQPDPVSADALLTLPPSTSCLSQLESGSIAQHRGSSWGSSLAGAQSYSLHALEDL 170
LP P P S L P TS + SS S+ G + A E+
Sbjct: 832 LPTTQYSPGPPSGATAL---PPTSAAPSAQGSPQPSASSSSQFSTSGGPWARERRAGEEP 888
Query: 171 HHTPGYPTPPPYPFT------------PFMTVSNDLPPKVG--------PLSPDEEADTG 210
P PT PP P + L +VG P+ E AD+G
Sbjct: 889 VPGPMTPTQPPPPLSLPPARSESEVLEEISRACETLVERVGRSATDPADPVDTAEPADSG 948
Query: 211 S--LHDPSPWVKEDGSIAWGSYECRR 234
+ L P+ +E G +A S C+R
Sbjct: 949 TERLLPPAQAKEEAGGVAAVSGSCKR 974
Score = 30.8 bits (68), Expect = 1.1
Identities = 32/124 (25%), Positives = 37/124 (29%), Gaps = 25/124 (20%)
Query: 85 PLPPLLPPPFPGDPAHFLFRDSWEQTLPDGLSQPDPVSADALLTLPPSTSCLSQLESGSI 144
P PPL PPP P P P L T PP + G
Sbjct: 247 PPPPLPPPPPP--------------------PPPPPPPLPGLATSPP----FQLTKPGLW 282
Query: 145 AQHRGSSWGSSLAG-AQSYSLHALEDLHHTPGYPTPPPYPFTPFMTVSNDLPPKVGPLSP 203
+ G +WG G A L H YP P P + PP GP P
Sbjct: 283 STLHGDAWGPERKGSAPPERQEQRHSLPHPYPYPAPAYTAHPPGHRLVPAAPPGPGPRPP 342
Query: 204 DEEA 207
E+
Sbjct: 343 GAES 346
>gi|170014705 SH3-domain binding protein 2 isoform a [Homo sapiens]
Length = 561
Score = 37.0 bits (84), Expect = 0.015
Identities = 54/188 (28%), Positives = 74/188 (39%), Gaps = 37/188 (19%)
Query: 43 PCESSAGQSHAALLEP-YFPQEPYGDYRPPALT--PNAGSLFSASPLPPLLPPPFPGDPA 99
P G+ AL+ P +P P R PA + P A S S P P L PPP P
Sbjct: 186 PDSPEPGRLEDALMHPPAYPPPPVPTPRKPAFSDMPRAHSFTSKGPGPLLPPPP----PK 241
Query: 100 HFL------FRDSWEQTLPDGLSQPDP--------VSADALLTLPPSTS-----CLSQLE 140
H L DS L ++P P +S L T+P + C +
Sbjct: 242 HGLPDVGLAAEDSKRDPLCPRRAEPCPRVPATPRRMSDPPLSTMPTAPGLRKPPCFRESA 301
Query: 141 SGS----IAQHRGSSWGSS--LAGAQSYSLHALEDLHHTP-GYPT--PPPYPFT--PFMT 189
S S H S S+ +A A S + L+ H +P G PT PPP P F+
Sbjct: 302 SPSPEPWTPGHGACSTSSAAIMATATSRNCDKLKSFHLSPRGPPTSEPPPVPANKPKFLK 361
Query: 190 VSNDLPPK 197
++ + PP+
Sbjct: 362 IAEEDPPR 369
>gi|170014703 SH3-domain binding protein 2 isoform a [Homo sapiens]
Length = 561
Score = 37.0 bits (84), Expect = 0.015
Identities = 54/188 (28%), Positives = 74/188 (39%), Gaps = 37/188 (19%)
Query: 43 PCESSAGQSHAALLEP-YFPQEPYGDYRPPALT--PNAGSLFSASPLPPLLPPPFPGDPA 99
P G+ AL+ P +P P R PA + P A S S P P L PPP P
Sbjct: 186 PDSPEPGRLEDALMHPPAYPPPPVPTPRKPAFSDMPRAHSFTSKGPGPLLPPPP----PK 241
Query: 100 HFL------FRDSWEQTLPDGLSQPDP--------VSADALLTLPPSTS-----CLSQLE 140
H L DS L ++P P +S L T+P + C +
Sbjct: 242 HGLPDVGLAAEDSKRDPLCPRRAEPCPRVPATPRRMSDPPLSTMPTAPGLRKPPCFRESA 301
Query: 141 SGS----IAQHRGSSWGSS--LAGAQSYSLHALEDLHHTP-GYPT--PPPYPFT--PFMT 189
S S H S S+ +A A S + L+ H +P G PT PPP P F+
Sbjct: 302 SPSPEPWTPGHGACSTSSAAIMATATSRNCDKLKSFHLSPRGPPTSEPPPVPANKPKFLK 361
Query: 190 VSNDLPPK 197
++ + PP+
Sbjct: 362 IAEEDPPR 369
>gi|217416343 fibrosin-like 1 [Homo sapiens]
Length = 1045
Score = 36.6 bits (83), Expect = 0.019
Identities = 39/129 (30%), Positives = 46/129 (35%), Gaps = 22/129 (17%)
Query: 69 RPPALTPNAGSLFSASPLPPLLPPPFPGDPAHFLFRDSWE--QTLPDGLSQPDPVSADAL 126
RPPA AG + PL P PA F S LP G DP S
Sbjct: 630 RPPAPGVFAGFHYPQDLARPLFPSTGAAHPASNPFGPSAHPGSFLPTG-PLTDPFSR--- 685
Query: 127 LTLPPST----SCLSQLESGSIAQHRGSSWGSSLAGAQSYSLHALEDLHHT--------P 174
PST LS G + H + GS A + S+H L H P
Sbjct: 686 ----PSTFGGLGSLSSHAFGGLGSHALAPGGSIFAPKEGSSVHGLPSPHEAWNRLHRAPP 741
Query: 175 GYPTPPPYP 183
+P PPP+P
Sbjct: 742 SFPAPPPWP 750
>gi|154426272 hypothetical protein LOC54540 [Homo sapiens]
Length = 789
Score = 36.6 bits (83), Expect = 0.019
Identities = 47/146 (32%), Positives = 59/146 (40%), Gaps = 16/146 (10%)
Query: 16 SFLSD---SDFHNSKQFSNDVYTSSVGKP--FPCES---SAGQSHAALLEPYFPQEPYGD 67
SFLS S NS S + SS+G P P E+ S H+ L P P P G
Sbjct: 84 SFLSAHKLSGLWNSPHSSGAMPGSSLGSPPTIPGEAFPVSEHHQHSDLTAP--PNSPTGH 141
Query: 68 YRPPA-LTPNAGSLFSASPLPPLLP----PPFPGDPAHFLFRDSWEQTLPDGL-SQPDPV 121
+ PA L P+ S F + P P LLP PFP + + P S P
Sbjct: 142 HPQPASLIPSHPSSFGSPPHPHLLPTTPAAPFPAQASECPVAAATAPHTPGPCQSSHLPS 201
Query: 122 SADALLTLPPSTSCLSQLESGSIAQH 147
++ LL +PP S S SG H
Sbjct: 202 TSMPLLKMPPPFSGCSHPCSGHCGGH 227
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 36.6 bits (83), Expect = 0.019
Identities = 43/163 (26%), Positives = 58/163 (35%), Gaps = 17/163 (10%)
Query: 64 PYGDYRPPALTP------NAGSLFSASPLPPLLPPPFP-GDPAHFLFRDSWEQTLPDGLS 116
P G PPA TP A +P PP + PP P G PA F + P +
Sbjct: 982 PKGAPTPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPAATPFPKG--ASTPPAAT 1039
Query: 117 QPDPVSADALLTLPPSTSCLSQLESGSIAQHRGSSWGSSLAGAQSYSLHALEDLHHTPGY 176
P P + A LP + ++ +G SL GA + P
Sbjct: 1040 PPSPKGSPAATPLPKGA---PTTPAATLPSPKGGPATPSLKGAPTPPAATPPSPKGGPAT 1096
Query: 177 PTPPPYPFTPFMTVSNDLPPKVGPLSPDEEA--DTGSLHDPSP 217
P+P P P T + PK G +P + T + PSP
Sbjct: 1097 PSPKGAPMPPAATPPS---PKGGLATPPHKGAPTTPAATPPSP 1136
Score = 28.9 bits (63), Expect = 4.0
Identities = 43/187 (22%), Positives = 64/187 (34%), Gaps = 25/187 (13%)
Query: 41 PFPCESSAGQSHAALLEPYFPQEPYGDYRPPALTPNAGSLFSASPLPPLLPPPFPGDPAH 100
PFP S+ + LE FPQ G P P A + LP L+ PP
Sbjct: 66 PFPSPSTIASTP---LEVPFPQSSSGTALPLGTAPEAPTF-----LPNLIGPPIS----- 112
Query: 101 FLFRDSWEQTLPDGLSQPDPVSADALLTLPPSTSCLSQLESGSIAQHRGSSWGSSLAGAQ 160
P L+ P+ A L P S++ L+ + + + S++ +L +
Sbjct: 113 -----------PAALALASPMIAPTLKGTPSSSAPLALVALAPHSVQKSSAFPPNLLTSP 161
Query: 161 SYSLHALEDLHHTPGYPTPPPYPFTPFMTVSNDLPPK-VGPLSPDEEADTGSLHDPSPWV 219
A T P P P T V +++ P G SP T H +P
Sbjct: 162 PSVAVAESGSVITLSAPIAPSEPKTNLNKVPSEVVPNPKGTPSPPCIVSTVPYHCVTPMA 221
Query: 220 KEDGSIA 226
+A
Sbjct: 222 SIQSGVA 228
>gi|210032580 SET domain containing 1B [Homo sapiens]
Length = 1923
Score = 35.8 bits (81), Expect = 0.033
Identities = 56/230 (24%), Positives = 76/230 (33%), Gaps = 29/230 (12%)
Query: 20 DSDFHNSKQFSNDVYTSSVGKPFPCESSAGQSHA-ALLEPYFPQEPYGDYRP----PALT 74
D + + + S + ++ KP A A ++L P P P + P P
Sbjct: 638 DMEISDDEMPSAPITSADCPKPMVVTPGAAAVAAPSVLAPTLPLPPPPGFPPLPPPPPPP 697
Query: 75 PNAGSLFSASPLPPLLPPPFPGDPAHFLFRDSWEQTLPDGLSQPDPVSADALLTLPPSTS 134
P PLPP PPP P PA + LP P P L PP
Sbjct: 698 PPQPGFPMPPPLPPPPPPPPPAHPAVTV----PPPPLPAPPGVPPPPILPPLPPFPPGLF 753
Query: 135 CLSQLESGSIAQHRGSSWGSSLAGAQSYSLHALEDLHHTPGYPTPPPYPFTPFMTVSN-- 192
+ Q++ + G WG Q + L L G P+ PFM +
Sbjct: 754 PVMQVDMSHVL---GGQWGGMPMSFQMQT-QVLSRLMTGQG-----ACPYPPFMAAAAAA 804
Query: 193 --------DLPPKVGPLSPDEEADTGSLHDPSPWVKEDGSIAWGSYECRR 234
+LPP GP S H P P K D S+ Y R+
Sbjct: 805 ASAGLQFVNLPPYRGPFSLSNSGPGRGQHWP-PLPKFDPSVPPPGYMPRQ 853
Score = 32.3 bits (72), Expect = 0.36
Identities = 55/220 (25%), Positives = 73/220 (33%), Gaps = 48/220 (21%)
Query: 41 PFPCESSAGQSHAALLEPYFPQEPYGDYRPPALTPNAGSLFSA--------SPLPPLLPP 92
P P +++ + PY Q P + PP P A + F A +P PP LPP
Sbjct: 382 PPPAQATPAPGFKSAFSPY--QTPVAHFPPPPEEPTATAAFGARDSGEFRRAPAPPPLPP 439
Query: 93 ------PFPGDPAHFLFRDSWEQTL---PDGLSQPDPVSADALLTLPPSTS--------- 134
PG P D+ L P P+P + TL S +
Sbjct: 440 AEPLAKEKPGTPPGPPPPDTNSMELGGRPTFGWSPEPCDSPGTPTLESSPAGPEKPHDSL 499
Query: 135 ----------------CLSQLESGSIAQHRGSSWGSSLAGAQSYSLHALEDLHHTPGYPT 178
L + +S + Q GS SS + S A + PG+
Sbjct: 500 DSRIEMLLKEQRTKLLFLREPDSDTELQMEGSPISSS---SSQLSPLAPFGTNSQPGFRG 556
Query: 179 PPPYPFTPFMTVSNDLPPKVGPLS-PDEEADTGSLHDPSP 217
P P P T D+ P P S DEE D G P P
Sbjct: 557 PTPPSSRPSSTGLEDISPTPLPDSDEDEELDLGLGPRPPP 596
Score = 28.1 bits (61), Expect = 6.9
Identities = 47/187 (25%), Positives = 65/187 (34%), Gaps = 32/187 (17%)
Query: 43 PCESSAGQSHAALLEPYFPQEPYGDYRPPALTPNAGS----------LFSASPLPPLLPP 92
P E Q A LL P P + + RPP A + PL P LPP
Sbjct: 1226 PEEPGLSQEGAMLLSPEPPAKEV-EARPPLSPERAPEHDLEVEPEPPMMLPLPLQPPLPP 1284
Query: 93 PF----PGDPAHFLFRDSWEQTLPDGLSQPDPVSADALLTLPPSTSCLSQLES------- 141
P P P D+ ++P P+P++ D P L++ +S
Sbjct: 1285 PRPPRPPSPPPEPETTDASHPSVP-----PEPLAEDHPPHTPGLCGSLAKSQSTETVPAT 1339
Query: 142 -GSIAQHRGSSWGSSLAGAQ----SYSLHALEDLHHTPGYPTPPPYPFTPFMTVSNDLPP 196
G G S G SL+ Q +S A + G P P F+ T S P
Sbjct: 1340 PGGEPPLSGGSSGLSLSSPQVPGSPFSYPAPSPSLSSGGLPRTPGRDFSFTPTFSEPSGP 1399
Query: 197 KVGPLSP 203
+ P+ P
Sbjct: 1400 LLLPVCP 1406
Score = 28.1 bits (61), Expect = 6.9
Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 5/55 (9%)
Query: 84 SPLPPLLPPPFPGDPAHFLFRDSWEQTLPDGLSQPDPVSADALLTLPPSTSCLSQ 138
+PLPPLLP P P + + P P +S D L PP+ + L +
Sbjct: 1455 TPLPPLLPAPLASCPPPMKRKPGRPRRSP-----PSMLSLDGPLVRPPAGAALGR 1504
>gi|53831997 suppressor of cytokine signaling 7 [Homo sapiens]
Length = 581
Score = 35.8 bits (81), Expect = 0.033
Identities = 41/133 (30%), Positives = 46/133 (34%), Gaps = 25/133 (18%)
Query: 85 PLPPLLPPPFPGDPAHFLFRDSWEQTLPDGLSQPDPVSADALLTLPPSTSCLSQLESGSI 144
P PP PPP P PA P P S DALL L S LE+ S
Sbjct: 84 PCPPQPPPPQPQPPA----------AAPQAGEDPTETS-DALLVLEGLESEAESLETNSC 132
Query: 145 AQHRGSSWGSSLAGAQSYSLHALEDLHHTPGYPTPPPYPFTPFMTVSNDLPPKVGPLSPD 204
++ SS G G L P P PP PF DL P +G LS
Sbjct: 133 SEEELSSPGRGGGGGGRLLLQ--------PPGPELPPVPFP-----LQDLVP-LGRLSRG 178
Query: 205 EEADTGSLHDPSP 217
E+ P P
Sbjct: 179 EQQQQQQQQPPPP 191
>gi|154689780 son of sevenless homolog 2 [Homo sapiens]
Length = 1332
Score = 35.4 bits (80), Expect = 0.043
Identities = 50/189 (26%), Positives = 64/189 (33%), Gaps = 35/189 (18%)
Query: 58 PYFPQEPYGDYRPPALTPNAGSLFSASPLPPLLPPPFPGDPAHFLFRDSWEQTLPDGLSQ 117
P FP++ + P + PN G S S P P +P F E L +S
Sbjct: 1023 PRFPRKSTFSLKSPGIRPNTGRHGSTSGTLRGHPTPLEREPCKISFSRIAETELESTVSA 1082
Query: 118 P--------DPVSADA----LLTLPPSTSCLSQLESGSIAQHRGSSWGSSLAGAQSYSLH 165
P PVSA + L + ++SC S + S+ SS SLH
Sbjct: 1083 PTSPNTPSTPPVSASSDLSVFLDVDLNSSCGSNSIFAPVLLPHSKSFFSSCG-----SLH 1137
Query: 166 ALEDLHHTPGYPTPPPYPF----------------TPFMTVSNDLPPKVGPLSP-DEEAD 208
L + P P PP F P + PPKV P P A
Sbjct: 1138 KLSEEPLIPP-PLPPRKKFDHDASNSKGNMKSDDDPPAIPPRQPPPPKVKPRVPVPTGAF 1196
Query: 209 TGSLHDPSP 217
G LH P P
Sbjct: 1197 DGPLHSPPP 1205
>gi|164565408 common-site lymphoma/leukemia guanine nucleotide
exchange factor [Homo sapiens]
Length = 1386
Score = 35.4 bits (80), Expect = 0.043
Identities = 45/166 (27%), Positives = 63/166 (37%), Gaps = 21/166 (12%)
Query: 32 DVYTSSVGKPFPCESSAGQSHAALLEPYFPQEPYGDYRPPALTP---NAGSL----FSAS 84
D+ + P P E S + L P Q+ D PA TP GSL S +
Sbjct: 1171 DIQGPAAAPPLP-EPSLTDTQVQKLTPSLEQKSLIDAHVPAATPLPERGGSLDIQGLSPT 1229
Query: 85 PLPPLLPPPFPGDP--AHFLFRDSWEQTLPDGLSQPDPVSADALLTLPPSTSCLSQLE-- 140
P+ + PG +H +S + T P P P S L P+ + LS+
Sbjct: 1230 PVQTTMVLSKPGGSLASHVARLESSDLTPPHS---PPPSSRQLL---GPNAAALSRYLAA 1283
Query: 141 ---SGSIAQHRGSSWGSSLAGAQSYSLHALEDLHHTPGYPTPPPYP 183
S S+A+ +G G+ A S+S P P PPP P
Sbjct: 1284 SYISQSLARRQGPGGGAPAASRGSWSSAPTSRASSPPPQPQPPPPP 1329
>gi|239755450 PREDICTED: hypothetical protein [Homo sapiens]
Length = 153
Score = 35.0 bits (79), Expect = 0.056
Identities = 22/55 (40%), Positives = 26/55 (47%), Gaps = 8/55 (14%)
Query: 78 GSLFSASPLPPL-LPPPFPGDPAHFLFRDSWEQTLPDGLSQPDPVSADALLTLPP 131
G+ FSA P P LPPP P P+H L W + LP +P D LPP
Sbjct: 42 GASFSAEPRPRASLPPPRPARPSHLL----WPKRLP---GRPGRAPGDRRAALPP 89
>gi|239749929 PREDICTED: hypothetical protein [Homo sapiens]
Length = 153
Score = 35.0 bits (79), Expect = 0.056
Identities = 22/55 (40%), Positives = 26/55 (47%), Gaps = 8/55 (14%)
Query: 78 GSLFSASPLPPL-LPPPFPGDPAHFLFRDSWEQTLPDGLSQPDPVSADALLTLPP 131
G+ FSA P P LPPP P P+H L W + LP +P D LPP
Sbjct: 42 GASFSAEPRPRASLPPPRPARPSHLL----WPKRLP---GRPGRAPGDRRAALPP 89
>gi|239744238 PREDICTED: hypothetical protein [Homo sapiens]
Length = 153
Score = 35.0 bits (79), Expect = 0.056
Identities = 22/55 (40%), Positives = 26/55 (47%), Gaps = 8/55 (14%)
Query: 78 GSLFSASPLPPL-LPPPFPGDPAHFLFRDSWEQTLPDGLSQPDPVSADALLTLPP 131
G+ FSA P P LPPP P P+H L W + LP +P D LPP
Sbjct: 42 GASFSAEPRPRASLPPPRPARPSHLL----WPKRLP---GRPGRAPGDRRAALPP 89
>gi|218156340 chapsyn-110 isoform 3 [Homo sapiens]
Length = 749
Score = 35.0 bits (79), Expect = 0.056
Identities = 34/136 (25%), Positives = 57/136 (41%), Gaps = 21/136 (15%)
Query: 30 SNDVYTSSVGKPFPCESSAGQSHAALLEPYFPQEPYGDYRPPA----LTPNAGSLFSASP 85
+++V VGKP + + +PY P + Y PP L+ N G+L +
Sbjct: 217 TSEVVYLKVGKP---------TTIYMTDPYGPPDITHSYSPPMENHLLSGNNGTLEYKTS 267
Query: 86 LPPLLPPPFPGDPAHFLFRDSWEQTLPDGLSQPDPVSADALLTLPPSTSCLSQLESGSIA 145
LPP+ P + P H L D + SQ + +TL + S + E +
Sbjct: 268 LPPISPGRYSPIPKHMLVDDDYTSH-----SQHSTATRQPSMTLQRAVSL--EGEPRKVV 320
Query: 146 QHRGSS-WGSSLAGAQ 160
H+GS+ G ++ G +
Sbjct: 321 LHKGSTGLGFNIVGGE 336
>gi|239753123 PREDICTED: kelch-like 29 (Drosophila) [Homo sapiens]
Length = 875
Score = 34.7 bits (78), Expect = 0.073
Identities = 40/161 (24%), Positives = 59/161 (36%), Gaps = 33/161 (20%)
Query: 53 AALLEPYFPQEPYGDYRPPALTPNAG---SLFSASP-LPPLLPPPFPGDPAHFLFRDSWE 108
AA +P YG +PP +P + +P LPP + P P P H+
Sbjct: 152 AAGNQPTLIAHSYGVAQPPTFSPAVNVQAPVIGVTPSLPPHVGPQLPLMPGHY------- 204
Query: 109 QTLPDGLSQPDP-----VSADALLTLPPSTSCLSQLESGSIAQHRGSSWGSSLAGAQSYS 163
+LP SQP + A AL P + + G +A+ ++ G+
Sbjct: 205 -SLPQPPSQPLSSVVVNMPAQALYASPQPLAVSTLPGVGQVARPGPTAVGNG-------- 255
Query: 164 LHALEDLHHTPGYPTPPPYPFTPFMTVSNDLPPKVGPLSPD 204
H G PPP P P T+ + P GP + D
Sbjct: 256 --------HMAGPLLPPPPPAQPSATLPSGAPATNGPPTTD 288
>gi|239747686 PREDICTED: kelch-like 29 (Drosophila) [Homo sapiens]
Length = 702
Score = 34.7 bits (78), Expect = 0.073
Identities = 40/161 (24%), Positives = 59/161 (36%), Gaps = 33/161 (20%)
Query: 53 AALLEPYFPQEPYGDYRPPALTPNAG---SLFSASP-LPPLLPPPFPGDPAHFLFRDSWE 108
AA +P YG +PP +P + +P LPP + P P P H+
Sbjct: 152 AAGNQPTLIAHSYGVAQPPTFSPAVNVQAPVIGVTPSLPPHVGPQLPLMPGHY------- 204
Query: 109 QTLPDGLSQPDP-----VSADALLTLPPSTSCLSQLESGSIAQHRGSSWGSSLAGAQSYS 163
+LP SQP + A AL P + + G +A+ ++ G+
Sbjct: 205 -SLPQPPSQPLSSVVVNMPAQALYASPQPLAVSTLPGVGQVARPGPTAVGNG-------- 255
Query: 164 LHALEDLHHTPGYPTPPPYPFTPFMTVSNDLPPKVGPLSPD 204
H G PPP P P T+ + P GP + D
Sbjct: 256 --------HMAGPLLPPPPPAQPSATLPSGAPATNGPPTTD 288
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.133 0.428
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,759,137
Number of Sequences: 37866
Number of extensions: 876751
Number of successful extensions: 4229
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 298
Number of HSP's that attempted gapping in prelim test: 3629
Number of HSP's gapped (non-prelim): 824
length of query: 236
length of database: 18,247,518
effective HSP length: 99
effective length of query: 137
effective length of database: 14,498,784
effective search space: 1986333408
effective search space used: 1986333408
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.