BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|38202207 monoamine oxidase B [Homo sapiens] (520 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|38202207 monoamine oxidase B [Homo sapiens] 1069 0.0 gi|4557735 monoamine oxidase A [Homo sapiens] 799 0.0 gi|23097272 polyamine oxidase isoform 1 [Homo sapiens] 75 2e-13 gi|23821023 interleukin 4 induced 1 isoform 1 precursor [Homo sa... 68 2e-11 gi|27477089 interleukin 4 induced 1 isoform 2 [Homo sapiens] 68 2e-11 gi|116256451 amine oxidase (flavin containing) domain 1 [Homo sa... 67 5e-11 gi|58761546 amine oxidase (flavin containing) domain 2 isoform b... 60 4e-09 gi|46397310 polyamine oxidase isoform 4 [Homo sapiens] 60 5e-09 gi|58761544 amine oxidase (flavin containing) domain 2 isoform a... 60 5e-09 gi|28559080 spermine oxidase isoform 4 [Homo sapiens] 46 7e-05 gi|28559078 spermine oxidase isoform 3 [Homo sapiens] 46 7e-05 gi|28559076 spermine oxidase isoform 2 [Homo sapiens] 46 7e-05 gi|28559074 spermine oxidase isoform 1 [Homo sapiens] 46 7e-05 gi|203098013 all-trans-13,14-dihydroretinol saturase [Homo sapiens] 46 7e-05 gi|46397308 polyamine oxidase isoform 2 [Homo sapiens] 42 0.001 gi|166795301 prenylcysteine oxidase 1 [Homo sapiens] 42 0.001 gi|170650615 protoporphyrinogen oxidase [Homo sapiens] 42 0.002 gi|4506001 protoporphyrinogen oxidase [Homo sapiens] 42 0.002 gi|229577391 pyridine nucleotide-disulphide oxidoreductase domai... 36 0.097 gi|221316678 flavin containing monooxygenase 5 isoform 3 [Homo s... 35 0.17 gi|221316674 flavin containing monooxygenase 5 isoform 2 [Homo s... 35 0.17 gi|221316672 flavin containing monooxygenase 5 isoform 1 [Homo s... 35 0.17 gi|8923271 coiled-coil domain containing 49 [Homo sapiens] 33 0.82 gi|171906567 peripheral benzodiazepine receptor-associated prote... 32 1.1 gi|171906559 peripheral benzodiazepine receptor-associated prote... 32 1.1 gi|4503755 flavin containing monooxygenase 1 [Homo sapiens] 32 1.4 gi|33519426 thioredoxin reductase 1 isoform 2 [Homo sapiens] 31 3.1 gi|148277071 thioredoxin reductase 1 isoform 3 [Homo sapiens] 31 3.1 gi|148277065 thioredoxin reductase 1 isoform 1 [Homo sapiens] 31 3.1 gi|33519430 thioredoxin reductase 1 isoform 2 [Homo sapiens] 31 3.1 >gi|38202207 monoamine oxidase B [Homo sapiens] Length = 520 Score = 1069 bits (2764), Expect = 0.0 Identities = 520/520 (100%), Positives = 520/520 (100%) Query: 1 MSNKCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGRTYTLRNQKVKYVDLGGSY 60 MSNKCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGRTYTLRNQKVKYVDLGGSY Sbjct: 1 MSNKCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGRTYTLRNQKVKYVDLGGSY 60 Query: 61 VGPTQNRILRLAKELGLETYKVNEVERLIHHVKGKSYPFRGPFPPVWNPITYLDHNNFWR 120 VGPTQNRILRLAKELGLETYKVNEVERLIHHVKGKSYPFRGPFPPVWNPITYLDHNNFWR Sbjct: 61 VGPTQNRILRLAKELGLETYKVNEVERLIHHVKGKSYPFRGPFPPVWNPITYLDHNNFWR 120 Query: 121 TMDDMGREIPSDAPWKAPLAEEWDNMTMKELLDKLCWTESAKQLATLFVNLCVTAETHEV 180 TMDDMGREIPSDAPWKAPLAEEWDNMTMKELLDKLCWTESAKQLATLFVNLCVTAETHEV Sbjct: 121 TMDDMGREIPSDAPWKAPLAEEWDNMTMKELLDKLCWTESAKQLATLFVNLCVTAETHEV 180 Query: 181 SALWFLWYVKQCGGTTRIISTTNGGQERKFVGGSGQVSERIMDLLGDRVKLERPVIYIDQ 240 SALWFLWYVKQCGGTTRIISTTNGGQERKFVGGSGQVSERIMDLLGDRVKLERPVIYIDQ Sbjct: 181 SALWFLWYVKQCGGTTRIISTTNGGQERKFVGGSGQVSERIMDLLGDRVKLERPVIYIDQ 240 Query: 241 TRENVLVETLNHEMYEAKYVISAIPPTLGMKIHFNPPLPMMRNQMITRVPLGSVIKCIVY 300 TRENVLVETLNHEMYEAKYVISAIPPTLGMKIHFNPPLPMMRNQMITRVPLGSVIKCIVY Sbjct: 241 TRENVLVETLNHEMYEAKYVISAIPPTLGMKIHFNPPLPMMRNQMITRVPLGSVIKCIVY 300 Query: 301 YKEPFWRKKDYCGTMIIDGEEAPVAYTLDDTKPEGNYAAIMGFILAHKARKLARLTKEER 360 YKEPFWRKKDYCGTMIIDGEEAPVAYTLDDTKPEGNYAAIMGFILAHKARKLARLTKEER Sbjct: 301 YKEPFWRKKDYCGTMIIDGEEAPVAYTLDDTKPEGNYAAIMGFILAHKARKLARLTKEER 360 Query: 361 LKKLCELYAKVLGSLEALEPVHYEEKNWCEEQYSGGCYTTYFPPGILTQYGRVLRQPVDR 420 LKKLCELYAKVLGSLEALEPVHYEEKNWCEEQYSGGCYTTYFPPGILTQYGRVLRQPVDR Sbjct: 361 LKKLCELYAKVLGSLEALEPVHYEEKNWCEEQYSGGCYTTYFPPGILTQYGRVLRQPVDR 420 Query: 421 IYFAGTETATHWSGYMEGAVEAGERAAREILHAMGKIPEDEIWQSEPESVDVPAQPITTT 480 IYFAGTETATHWSGYMEGAVEAGERAAREILHAMGKIPEDEIWQSEPESVDVPAQPITTT Sbjct: 421 IYFAGTETATHWSGYMEGAVEAGERAAREILHAMGKIPEDEIWQSEPESVDVPAQPITTT 480 Query: 481 FLERHLPSVPGLLRLIGLTTIFSATALGFLAHKRGLLVRV 520 FLERHLPSVPGLLRLIGLTTIFSATALGFLAHKRGLLVRV Sbjct: 481 FLERHLPSVPGLLRLIGLTTIFSATALGFLAHKRGLLVRV 520 >gi|4557735 monoamine oxidase A [Homo sapiens] Length = 527 Score = 799 bits (2064), Expect = 0.0 Identities = 376/514 (73%), Positives = 447/514 (86%), Gaps = 2/514 (0%) Query: 6 DVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGRTYTLRNQKVKYVDLGGSYVGPTQ 65 DVVV+GGGISG++AAKLL + G++V+VLEARDRVGGRTYT+RN+ V YVD+GG+YVGPTQ Sbjct: 15 DVVVIGGGISGLSAAKLLTEYGVSVLVLEARDRVGGRTYTIRNEHVDYVDVGGAYVGPTQ 74 Query: 66 NRILRLAKELGLETYKVNEVERLIHHVKGKSYPFRGPFPPVWNPITYLDHNNFWRTMDDM 125 NRILRL+KELG+ETYKVN ERL+ +VKGK+YPFRG FPPVWNPI YLD+NN WRT+D+M Sbjct: 75 NRILRLSKELGIETYKVNVSERLVQYVKGKTYPFRGAFPPVWNPIAYLDYNNLWRTIDNM 134 Query: 126 GREIPSDAPWKAPLAEEWDNMTMKELLDKLCWTESAKQLATLFVNLCVTAETHEVSALWF 185 G+EIP+DAPW+A A++WD MTMKEL+DK+CWT++A++ A LFVN+ VT+E HEVSALWF Sbjct: 135 GKEIPTDAPWEAQHADKWDKMTMKELIDKICWTKTARRFAYLFVNINVTSEPHEVSALWF 194 Query: 186 LWYVKQCGGTTRIISTTNGGQERKFVGGSGQVSERIMDLLGDRVKLERPVIYIDQTRENV 245 LWYVKQCGGTTRI S TNGGQERKFVGGSGQVSERIMDLLGD+VKL PV ++DQ+ +N+ Sbjct: 195 LWYVKQCGGTTRIFSVTNGGQERKFVGGSGQVSERIMDLLGDQVKLNHPVTHVDQSSDNI 254 Query: 246 LVETLNHEMYEAKYVISAIPPTLGMKIHFNPPLPMMRNQMITRVPLGSVIKCIVYYKEPF 305 ++ETLNHE YE KYVI+AIPPTL KIHF P LP RNQ+I R+P+G+VIKC++YYKE F Sbjct: 255 IIETLNHEHYECKYVINAIPPTLTAKIHFRPELPAERNQLIQRLPMGAVIKCMMYYKEAF 314 Query: 306 WRKKDYCGTMIIDGEEAPVAYTLDDTKPEGNYAAIMGFILAHKARKLARLTKEERLKKLC 365 W+KKDYCG MII+ E+AP++ TLDDTKP+G+ AIMGFILA KA +LA+L KE R KK+C Sbjct: 315 WKKKDYCGCMIIEDEDAPISITLDDTKPDGSLPAIMGFILARKADRLAKLHKEIRKKKIC 374 Query: 366 ELYAKVLGSLEALEPVHYEEKNWCEEQYSGGCYTTYFPPGILTQYGRVLRQPVDRIYFAG 425 ELYAKVLGS EAL PVHYEEKNWCEEQYSGGCYT YFPPGI+TQYGRV+RQPV RI+FAG Sbjct: 375 ELYAKVLGSQEALHPVHYEEKNWCEEQYSGGCYTAYFPPGIMTQYGRVIRQPVGRIFFAG 434 Query: 426 TETATHWSGYMEGAVEAGERAAREILHAMGKIPEDEIWQSEPESVDVPAQPITTTFLERH 485 TETAT WSGYMEGAVEAGERAARE+L+ +GK+ E +IW EPES DVPA IT TF ER+ Sbjct: 435 TETATKWSGYMEGAVEAGERAAREVLNGLGKVTEKDIWVQEPESKDVPAVEITHTFWERN 494 Query: 486 LPSVPGLLRLIGLTTIFSATALGFLAHKRGLLVR 519 LPSV GLL++IG +T S TALGF+ +K LL R Sbjct: 495 LPSVSGLLKIIGFST--SVTALGFVLYKYKLLPR 526 >gi|23097272 polyamine oxidase isoform 1 [Homo sapiens] Length = 511 Score = 74.7 bits (182), Expect = 2e-13 Identities = 128/506 (25%), Positives = 207/506 (40%), Gaps = 85/506 (16%) Query: 7 VVVVGGGISGMAAAKLL--HDSGLNVVVLEARDRVGGRTYTLRNQKV--KYVDLGGSYV- 61 V+VVGGGI+G+ AA+ L H + ++ VLEA R GGR +R+++ V++G ++ Sbjct: 16 VLVVGGGIAGLGAAQRLCGHSAFPHLRVLEATARAGGR---IRSERCFGGVVEVGAHWIH 72 Query: 62 GPTQ-NRILRLAKELGL----ETYKVNEVERLIHHVKGKSYPFRGPFPPVWNPITYLDHN 116 GP++ N + +LA E GL E + N++ HV S + V + Sbjct: 73 GPSRGNPVFQLAAEYGLLGEKELSQENQLVETGGHVGLPSVSYASSGASVSLQLVAEMAT 132 Query: 117 NFWRTMDDMGREIPSDAPWKAPLAEEWDNMTMKELLDKLC-WTESAK----QLATL--FV 169 F+ +D RE A P E+ KE+ + WTE + +LA L F Sbjct: 133 LFYGLIDQT-REFLHAAETPVPSVGEY---LKKEIGQHVAGWTEDEETRKLKLAVLNSFF 188 Query: 170 NL-CVTAETHEVSALWFLWYVKQCGGTTRIISTTNGGQERKFVGGSGQVSERIMDLLG-D 227 NL C + TH + + + + T G + F G ++ +M L D Sbjct: 189 NLECCVSGTHSMDLVALAPFGEY---------TVLPGLDCTFSKGYQGLTNCMMAALPED 239 Query: 228 RVKLERPVIYIDQTRE-----------NVLVETLNHEMYEAKYVISAIPPTLG-----MK 271 V E+PV I V VE + + + A +VI +P LG + Sbjct: 240 TVVFEKPVKTIHWNGSFQEAAFPGETFPVSVECEDGDRFPAHHVIVTVP--LGFLREHLD 297 Query: 272 IHFNPPLPMMRNQMITRVPLGSVIKCIVYYKEPFWRKKDYCGTMIIDGEEAPVAYTLDDT 331 F+PPLP + + I ++ G+ K + ++EPFW C + + E+ L+D Sbjct: 298 TFFDPPLPAEKAEAIRKIGFGTNNKIFLEFEEPFWEPD--CQLIQLVWEDTS---PLEDA 352 Query: 332 KPE------------------GNYAAIMGFILAHKARKLARLTKEERLKKLCELYAKVLG 373 PE + + GFI ++ + L+ EE L L ++ +V G Sbjct: 353 APELQDAWFRKLIGFVVLPAFASVHVLCGFIAGLESEFMETLSDEEVLLCLTQVLRRVTG 412 Query: 374 SLEALEPVHYEEKNWCEEQYSGGCYTTYFPPGILTQYGRVLRQPVD--------RIYFAG 425 + P W Y+ G Y +Y G +L QP+ +I FAG Sbjct: 413 NPRLPAPKSVLRSRWHSAPYTRGSY-SYVAVGSTGGDLDLLAQPLPADGAGAQLQILFAG 471 Query: 426 TETATHWSGYMEGAVEAGERAAREIL 451 T + GA+ +G R A +L Sbjct: 472 EATHRTFYSTTHGALLSGWREADRLL 497 >gi|23821023 interleukin 4 induced 1 isoform 1 precursor [Homo sapiens] Length = 567 Score = 68.2 bits (165), Expect = 2e-11 Identities = 37/96 (38%), Positives = 61/96 (63%), Gaps = 5/96 (5%) Query: 7 VVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGRTYTLRNQKVKYVDLGGSYVGPTQN 66 V+VVG G++G+ AAK+L D+G V +LEA +R+GGR +T R+Q ++ G+ P+ + Sbjct: 62 VIVVGAGVAGLVAAKVLSDAGHKVTILEADNRIGGRIFTYRDQNTGWIGELGAMRMPSSH 121 Query: 67 RIL-RLAKELGLETYKVNEVER----LIHHVKGKSY 97 RIL +L + LGL K + ++ +H VK ++Y Sbjct: 122 RILHKLCQGLGLNLTKFTQYDKNTWTEVHEVKLRNY 157 Score = 66.2 bits (160), Expect = 7e-11 Identities = 70/278 (25%), Positives = 115/278 (41%), Gaps = 16/278 (5%) Query: 206 QERKFVGGSGQVSERIMDLLGDRVKLERPVIYIDQTRENVLVE------TLNHEMYEAKY 259 Q + VGG + ++ L V L PV+ + Q +V V+ N ++ +A Sbjct: 258 QYSRIVGGWDLLPRALLSSLSGLVLLNAPVVAMTQGPHDVHVQIETSPPARNLKVLKADV 317 Query: 260 VISAIPPTLGMKIHFNPPLPMMRNQMITRVPLGSVIKCIVYYKEPFWRKKDY-CGTMIID 318 V+ +I F+PPLP + + R+ K + ++ PFWR++ G D Sbjct: 318 VLLTASGPAVKRITFSPPLPRHMQEALRRLHYVPATKVFLSFRRPFWREEHIEGGHSNTD 377 Query: 319 GEEAPVAYTLDDTKPEGNYAAIMGFILAHKARKLARLTKEERLKKLCELYAKVLGS-LEA 377 + Y P + + + A A L++EE L+ + A + G + Sbjct: 378 RPSRMIFY----PPPREGALLLASYTWSDAAAAFAGLSREEALRLALDDVAALHGPVVRQ 433 Query: 378 LEPVHYEEKNWCEEQYSGGCYTTYFPPGILTQYGRVLRQPVDRIYFAGTETATHWSGYME 437 L K W E+Q+S G + PP + P RIYFAG TA + G++E Sbjct: 434 LWDGTGVVKRWAEDQHSQGGFVVQ-PPALWQTEKDDWTVPYGRIYFAGEHTA-YPHGWVE 491 Query: 438 GAVEAGERAAREILHAMGKIPEDEIWQSEPESVDVPAQ 475 AV++ RAA +I G P + E + D+ Q Sbjct: 492 TAVKSALRAAIKINSRKG--PASDTASPEGHASDMEGQ 527 >gi|27477089 interleukin 4 induced 1 isoform 2 [Homo sapiens] Length = 589 Score = 68.2 bits (165), Expect = 2e-11 Identities = 37/96 (38%), Positives = 61/96 (63%), Gaps = 5/96 (5%) Query: 7 VVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGRTYTLRNQKVKYVDLGGSYVGPTQN 66 V+VVG G++G+ AAK+L D+G V +LEA +R+GGR +T R+Q ++ G+ P+ + Sbjct: 84 VIVVGAGVAGLVAAKVLSDAGHKVTILEADNRIGGRIFTYRDQNTGWIGELGAMRMPSSH 143 Query: 67 RIL-RLAKELGLETYKVNEVER----LIHHVKGKSY 97 RIL +L + LGL K + ++ +H VK ++Y Sbjct: 144 RILHKLCQGLGLNLTKFTQYDKNTWTEVHEVKLRNY 179 Score = 66.2 bits (160), Expect = 7e-11 Identities = 70/278 (25%), Positives = 115/278 (41%), Gaps = 16/278 (5%) Query: 206 QERKFVGGSGQVSERIMDLLGDRVKLERPVIYIDQTRENVLVE------TLNHEMYEAKY 259 Q + VGG + ++ L V L PV+ + Q +V V+ N ++ +A Sbjct: 280 QYSRIVGGWDLLPRALLSSLSGLVLLNAPVVAMTQGPHDVHVQIETSPPARNLKVLKADV 339 Query: 260 VISAIPPTLGMKIHFNPPLPMMRNQMITRVPLGSVIKCIVYYKEPFWRKKDY-CGTMIID 318 V+ +I F+PPLP + + R+ K + ++ PFWR++ G D Sbjct: 340 VLLTASGPAVKRITFSPPLPRHMQEALRRLHYVPATKVFLSFRRPFWREEHIEGGHSNTD 399 Query: 319 GEEAPVAYTLDDTKPEGNYAAIMGFILAHKARKLARLTKEERLKKLCELYAKVLGS-LEA 377 + Y P + + + A A L++EE L+ + A + G + Sbjct: 400 RPSRMIFY----PPPREGALLLASYTWSDAAAAFAGLSREEALRLALDDVAALHGPVVRQ 455 Query: 378 LEPVHYEEKNWCEEQYSGGCYTTYFPPGILTQYGRVLRQPVDRIYFAGTETATHWSGYME 437 L K W E+Q+S G + PP + P RIYFAG TA + G++E Sbjct: 456 LWDGTGVVKRWAEDQHSQGGFVVQ-PPALWQTEKDDWTVPYGRIYFAGEHTA-YPHGWVE 513 Query: 438 GAVEAGERAAREILHAMGKIPEDEIWQSEPESVDVPAQ 475 AV++ RAA +I G P + E + D+ Q Sbjct: 514 TAVKSALRAAIKINSRKG--PASDTASPEGHASDMEGQ 549 >gi|116256451 amine oxidase (flavin containing) domain 1 [Homo sapiens] Length = 590 Score = 66.6 bits (161), Expect = 5e-11 Identities = 56/252 (22%), Positives = 101/252 (40%), Gaps = 8/252 (3%) Query: 205 GQERKFVGGSGQVSERIMDLLGDRVKLERPVIYIDQTRENVLVETLNHEMYEAKYVISAI 264 G G + E++ + G ++L+ PV ID + + V V T + Y A+ V+ + Sbjct: 338 GDHTLLTPGYSVIIEKLAE--GLDIQLKSPVQCIDYSGDEVQVTTTDGTGYSAQKVLVTV 395 Query: 265 PPTLGMK--IHFNPPLPMMRNQMITRVPLGSVIKCIVYYKEPFWRKK----DYCGTMIID 318 P L K I FNPPL + + I + G + K + + FW K D+ G + Sbjct: 396 PLALLQKGAIQFNPPLSEKKMKAINSLGAGIIEKIALQFPYRFWDSKVQGADFFGHVPPS 455 Query: 319 GEEAPVAYTLDDTKPEGNYAAIMGFILAHKARKLARLTKEERLKKLCELYAKVLGSLEAL 378 + + D P+ ++ +M I + L ++ L++ ++ E Sbjct: 456 ASKRGLFAVFYDMDPQKKHSVLMSVIAGEAVASVRTLDDKQVLQQCMATLRELFKEQEVP 515 Query: 379 EPVHYEEKNWCEEQYSGGCYTTYFPPGILTQYGRVLRQPVDRIYFAGTETATHWSGYMEG 438 +P Y W + + Y+ G Y + ++FAG T H+ + G Sbjct: 516 DPTKYFVTRWSTDPWIQMAYSFVKTGGSGEAYDIIAEDIQGTVFFAGEATNRHFPQTVTG 575 Query: 439 AVEAGERAAREI 450 A +G R A +I Sbjct: 576 AYLSGVREASKI 587 Score = 54.7 bits (130), Expect = 2e-07 Identities = 28/79 (35%), Positives = 48/79 (60%), Gaps = 1/79 (1%) Query: 7 VVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGRTYTLRNQKVKYVDLGGSYV-GPTQ 65 V+++G G +G+AAA+ LH+ G+ V VLEA+DR+GGR + ++ K V G V G Sbjct: 253 VIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRIGGRVWDDKSFKGVTVGRGAQIVNGCIN 312 Query: 66 NRILRLAKELGLETYKVNE 84 N + + +++ ++ NE Sbjct: 313 NPVALMCEQVSARSWDHNE 331 >gi|58761546 amine oxidase (flavin containing) domain 2 isoform b [Homo sapiens] Length = 852 Score = 60.5 bits (145), Expect = 4e-09 Identities = 37/94 (39%), Positives = 59/94 (62%), Gaps = 5/94 (5%) Query: 7 VVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGRTYTLRNQKVKYV-DLGGSYV-GPT 64 V+++G G+SG+AAA+ L G++V +LEARDRVGGR T R K YV DLG V G Sbjct: 281 VIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRVATFR--KGNYVADLGAMVVTGLG 338 Query: 65 QNRILRLAKELGLETYKVNEVERLIHHVKGKSYP 98 N + ++K++ +E K+ + + ++ G++ P Sbjct: 339 GNPMAVVSKQVNMELAKIKQ-KCPLYEANGQAVP 371 Score = 41.2 bits (95), Expect = 0.002 Identities = 52/237 (21%), Positives = 92/237 (38%), Gaps = 39/237 (16%) Query: 260 VISAIPPTLGMKIHFNPPLPMMRNQMITRVPLGSVIKCIVYYKEPFWRKK----DYCGTM 315 V+ PP + F PPLP + + R+ G++ K ++ + FW + G+ Sbjct: 629 VLKQQPPA----VQFVPPLPEWKTSAVQRMGFGNLNKVVLCFDRVFWDPSVNLFGHVGST 684 Query: 316 IIDGEEAPVAYTLDDTKPEGNYAAIMGFILAHKARKLARLTKEERLKKLCELYAK-VLGS 374 E + + L A I+ ++A +A + ++ + C K + GS Sbjct: 685 TASRGELFLFWNLYK-------APILLALVAGEAAGIMENISDDVIVGRCLAILKGIFGS 737 Query: 375 LEALEPVHYEEKNWCEEQYSGGCYTTYFPPGILTQYGRVLR------------QPVDRIY 422 +P W + ++ G Y+ Y + + QP+ R++ Sbjct: 738 SAVPQPKETVVSRWRADPWARGSYSYVAAGSSGNDYDLMAQPITPGPSIPGAPQPIPRLF 797 Query: 423 FAGTETATHWSGYMEGAVEAGERAAREI----LHAMGKIPEDEIWQSEPESVDVPAQ 475 FAG T ++ + GA+ +G R A I L AM +P Q+ P VPAQ Sbjct: 798 FAGEHTIRNYPATVHGALLSGLREAGRIADQFLGAMYTLPR----QATP---GVPAQ 847 >gi|46397310 polyamine oxidase isoform 4 [Homo sapiens] Length = 486 Score = 60.1 bits (144), Expect = 5e-09 Identities = 99/377 (26%), Positives = 164/377 (43%), Gaps = 61/377 (16%) Query: 7 VVVVGGGISGMAAAKLL--HDSGLNVVVLEARDRVGGRTYTLRNQKV--KYVDLGGSYV- 61 V+VVGGGI+G+ AA+ L H + ++ VLEA R GGR +R+++ V++G ++ Sbjct: 16 VLVVGGGIAGLGAAQRLCGHSAFPHLRVLEATARAGGR---IRSERCFGGVVEVGAHWIH 72 Query: 62 GPTQ-NRILRLAKELGL----ETYKVNEVERLIHHVKGKSYPFRGPFPPVWNPITYLDHN 116 GP++ N + +LA E GL E + N++ HV S + V + Sbjct: 73 GPSRGNPVFQLAAEYGLLGEKELSQENQLVETGGHVGLPSVSYASSGASVSLQLVAEMAT 132 Query: 117 NFWRTMDDMGREIPSDAPWKAPLAEEWDNMTMKELLDKLC-WTESAK----QLATL--FV 169 F+ +D RE A P E+ KE+ + WTE + +LA L F Sbjct: 133 LFYGLIDQT-REFLHAAETPVPSVGEY---LKKEIGQHVAGWTEDEETRKLKLAVLNSFF 188 Query: 170 NL-CVTAETHEVSALWFLWYVKQCGGTTRIISTTNGGQERKFVGGSGQVSERIMDLL-GD 227 NL C + TH + + + + T G + F G ++ +M L D Sbjct: 189 NLECCVSGTHSMDLVALAPFGEY---------TVLPGLDCTFSKGYQGLTNCMMAALPED 239 Query: 228 RVKLERPVIYIDQTRE-----------NVLVETLNHEMYEAKYVISAIPPTLG-----MK 271 V E+PV I V VE + + + A +VI +P LG + Sbjct: 240 TVVFEKPVKTIHWNGSFQEAAFPGETFPVSVECEDGDRFPAHHVIVTVP--LGFLREHLD 297 Query: 272 IHFNPPLPMMRNQMITRVPLGSVIKCIVYYKEPFWRKKDYCGTMIIDGEEAPVAYTLDDT 331 F+PPLP + + I ++ G+ K + ++EPFW C + + E+ L+D Sbjct: 298 TFFDPPLPAEKAEAIRKIGFGTNNKIFLEFEEPFWEPD--CQLIQLVWEDTS---PLEDA 352 Query: 332 KPE---GNYAAIMGFIL 345 PE + ++GF++ Sbjct: 353 APELQDAWFRKLIGFVV 369 >gi|58761544 amine oxidase (flavin containing) domain 2 isoform a [Homo sapiens] Length = 876 Score = 60.1 bits (144), Expect = 5e-09 Identities = 35/80 (43%), Positives = 52/80 (65%), Gaps = 4/80 (5%) Query: 7 VVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGRTYTLRNQKVKYV-DLGGSYV-GPT 64 V+++G G+SG+AAA+ L G++V +LEARDRVGGR T R K YV DLG V G Sbjct: 301 VIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRVATFR--KGNYVADLGAMVVTGLG 358 Query: 65 QNRILRLAKELGLETYKVNE 84 N + ++K++ +E K+ + Sbjct: 359 GNPMAVVSKQVNMELAKIKQ 378 Score = 41.2 bits (95), Expect = 0.002 Identities = 52/237 (21%), Positives = 92/237 (38%), Gaps = 39/237 (16%) Query: 260 VISAIPPTLGMKIHFNPPLPMMRNQMITRVPLGSVIKCIVYYKEPFWRKK----DYCGTM 315 V+ PP + F PPLP + + R+ G++ K ++ + FW + G+ Sbjct: 653 VLKQQPPA----VQFVPPLPEWKTSAVQRMGFGNLNKVVLCFDRVFWDPSVNLFGHVGST 708 Query: 316 IIDGEEAPVAYTLDDTKPEGNYAAIMGFILAHKARKLARLTKEERLKKLCELYAK-VLGS 374 E + + L A I+ ++A +A + ++ + C K + GS Sbjct: 709 TASRGELFLFWNLYK-------APILLALVAGEAAGIMENISDDVIVGRCLAILKGIFGS 761 Query: 375 LEALEPVHYEEKNWCEEQYSGGCYTTYFPPGILTQYGRVLR------------QPVDRIY 422 +P W + ++ G Y+ Y + + QP+ R++ Sbjct: 762 SAVPQPKETVVSRWRADPWARGSYSYVAAGSSGNDYDLMAQPITPGPSIPGAPQPIPRLF 821 Query: 423 FAGTETATHWSGYMEGAVEAGERAAREI----LHAMGKIPEDEIWQSEPESVDVPAQ 475 FAG T ++ + GA+ +G R A I L AM +P Q+ P VPAQ Sbjct: 822 FAGEHTIRNYPATVHGALLSGLREAGRIADQFLGAMYTLPR----QATP---GVPAQ 871 >gi|28559080 spermine oxidase isoform 4 [Homo sapiens] Length = 532 Score = 46.2 bits (108), Expect = 7e-05 Identities = 29/73 (39%), Positives = 45/73 (61%), Gaps = 3/73 (4%) Query: 7 VVVVGGGISGMAAAKLLHDSGL-NVVVLEARDRVGGRTYTLRNQKVKYVDLGGSYV-GPT 64 VVV+G G++G+AAAK L + G +V VLEA +GGR +++ + +LG +++ G Sbjct: 27 VVVIGAGLAGLAAAKALLEQGFTDVTVLEASSHIGGRVQSVKLGHATF-ELGATWIHGSH 85 Query: 65 QNRILRLAKELGL 77 N I LA+ GL Sbjct: 86 GNPIYHLAEANGL 98 Score = 35.4 bits (80), Expect = 0.13 Identities = 31/142 (21%), Positives = 57/142 (40%), Gaps = 19/142 (13%) Query: 274 FNPPLPMMRNQMITRVPLGSVIKCIVYYKEPFWRKKDYCGTMIIDGEEAPVAYTLDDTKP 333 F P LP + I R+ +G+ K + ++EPFW + C ++ E+ ++TL P Sbjct: 292 FRPGLPTEKVAAIHRLGIGTTDKIFLEFEEPFWGPE--CNSLQFVWEDEAESHTL-TYPP 348 Query: 334 EGNYAAIMGFILAHKARKLARLTK---------------EERLKKLC-ELYAKVLGSLEA 377 E Y I GF + + + + +E + ++C E+ + G+ Sbjct: 349 ELWYRKICGFDVLYPPERYGHVLSGWICGEEALVMEKCDDEAVAEICTEMLRQFTGNPNI 408 Query: 378 LEPVHYEEKNWCEEQYSGGCYT 399 +P W Y G Y+ Sbjct: 409 PKPRRILRSAWGSNPYFRGSYS 430 >gi|28559078 spermine oxidase isoform 3 [Homo sapiens] Length = 190 Score = 46.2 bits (108), Expect = 7e-05 Identities = 29/73 (39%), Positives = 45/73 (61%), Gaps = 3/73 (4%) Query: 7 VVVVGGGISGMAAAKLLHDSGL-NVVVLEARDRVGGRTYTLRNQKVKYVDLGGSYV-GPT 64 VVV+G G++G+AAAK L + G +V VLEA +GGR +++ + +LG +++ G Sbjct: 27 VVVIGAGLAGLAAAKALLEQGFTDVTVLEASSHIGGRVQSVKLGHATF-ELGATWIHGSH 85 Query: 65 QNRILRLAKELGL 77 N I LA+ GL Sbjct: 86 GNPIYHLAEANGL 98 >gi|28559076 spermine oxidase isoform 2 [Homo sapiens] Length = 502 Score = 46.2 bits (108), Expect = 7e-05 Identities = 29/73 (39%), Positives = 45/73 (61%), Gaps = 3/73 (4%) Query: 7 VVVVGGGISGMAAAKLLHDSGL-NVVVLEARDRVGGRTYTLRNQKVKYVDLGGSYV-GPT 64 VVV+G G++G+AAAK L + G +V VLEA +GGR +++ + +LG +++ G Sbjct: 27 VVVIGAGLAGLAAAKALLEQGFTDVTVLEASSHIGGRVQSVKLGHATF-ELGATWIHGSH 85 Query: 65 QNRILRLAKELGL 77 N I LA+ GL Sbjct: 86 GNPIYHLAEANGL 98 Score = 39.7 bits (91), Expect = 0.007 Identities = 43/204 (21%), Positives = 80/204 (39%), Gaps = 30/204 (14%) Query: 274 FNPPLPMMRNQMITRVPLGSVIKCIVYYKEPFWRKKDYCGTMIIDGEEAPVAYTLDDTKP 333 F P LP + I R+ +G+ K + ++EPFW + C ++ E+ ++TL P Sbjct: 292 FRPGLPTEKVAAIHRLGIGTTDKIFLEFEEPFWGPE--CNSLQFVWEDEAESHTL-TYPP 348 Query: 334 EGNYAAIMGFILAHKARKLARLTK---------------EERLKKLC-ELYAKVLGSLEA 377 E Y I GF + + + + +E + ++C E+ + G+ Sbjct: 349 ELWYRKICGFDVLYPPERYGHVLSGWICGEEALVMEKCDDEAVAEICTEMLRQFTGNPNI 408 Query: 378 LEPVHYEEKNWCEEQYSGGCYTTYFPPGILTQYGRVLRQPVD----------RIYFAGTE 427 +P W Y G Y +Y G L +P+ ++ F+G Sbjct: 409 PKPRRILRSAWGSNPYFRGSY-SYTQVGSSGADVEKLAKPLPYTESSKTAPMQVLFSGEA 467 Query: 428 TATHWSGYMEGAVEAGERAAREIL 451 T + GA+ +G+R A ++ Sbjct: 468 THRKYYSTTHGALLSGQREAARLI 491 >gi|28559074 spermine oxidase isoform 1 [Homo sapiens] Length = 555 Score = 46.2 bits (108), Expect = 7e-05 Identities = 29/73 (39%), Positives = 45/73 (61%), Gaps = 3/73 (4%) Query: 7 VVVVGGGISGMAAAKLLHDSGL-NVVVLEARDRVGGRTYTLRNQKVKYVDLGGSYV-GPT 64 VVV+G G++G+AAAK L + G +V VLEA +GGR +++ + +LG +++ G Sbjct: 27 VVVIGAGLAGLAAAKALLEQGFTDVTVLEASSHIGGRVQSVKLGHATF-ELGATWIHGSH 85 Query: 65 QNRILRLAKELGL 77 N I LA+ GL Sbjct: 86 GNPIYHLAEANGL 98 Score = 42.4 bits (98), Expect = 0.001 Identities = 52/239 (21%), Positives = 97/239 (40%), Gaps = 37/239 (15%) Query: 244 NVLVETLNHEMYEAKYVISAIPPTLGM-----KIHFNPPLPMMRNQMITRVPLGSVIKCI 298 +V+VE + E+ A +VI + +LG+ F P LP + I R+ +G+ K Sbjct: 312 SVVVECEDCELIPADHVIVTV--SLGVLKRQYTSFFRPGLPTEKVAAIHRLGIGTTDKIF 369 Query: 299 VYYKEPFWRKKDYCGTMIIDGEEAPVAYTLDDTKPEGNYAAIMGFILAHKARKLARLTK- 357 + ++EPFW + C ++ E+ ++TL PE Y I GF + + + + Sbjct: 370 LEFEEPFWGPE--CNSLQFVWEDEAESHTL-TYPPELWYRKICGFDVLYPPERYGHVLSG 426 Query: 358 --------------EERLKKLC-ELYAKVLGSLEALEPVHYEEKNWCEEQYSGGCYTTYF 402 +E + ++C E+ + G+ +P W Y G Y +Y Sbjct: 427 WICGEEALVMEKCDDEAVAEICTEMLRQFTGNPNIPKPRRILRSAWGSNPYFRGSY-SYT 485 Query: 403 PPGILTQYGRVLRQPVD----------RIYFAGTETATHWSGYMEGAVEAGERAAREIL 451 G L +P+ ++ F+G T + GA+ +G+R A ++ Sbjct: 486 QVGSSGADVEKLAKPLPYTESSKTAPMQVLFSGEATHRKYYSTTHGALLSGQREAARLI 544 >gi|203098013 all-trans-13,14-dihydroretinol saturase [Homo sapiens] Length = 610 Score = 46.2 bits (108), Expect = 7e-05 Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 1/59 (1%) Query: 4 KCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGRTYTLRNQKVKYVDLGGSYVG 62 K DVVV+G G G+AAA +L +G V+VLE + GG +T +++ D G Y+G Sbjct: 67 KLDVVVIGSGFGGLAAAAILAKAGKRVLVLEQHTKAGGCCHTFGKNGLEF-DTGIHYIG 124 >gi|46397308 polyamine oxidase isoform 2 [Homo sapiens] Length = 325 Score = 42.4 bits (98), Expect = 0.001 Identities = 31/77 (40%), Positives = 50/77 (64%), Gaps = 9/77 (11%) Query: 7 VVVVGGGISGMAAAKLL--HDSGLNVVVLEARDRVGGRTYTLRNQKV--KYVDLGGSYV- 61 V+VVGGGI+G+ AA+ L H + ++ VLEA R GGR +R+++ V++G ++ Sbjct: 16 VLVVGGGIAGLGAAQRLCGHSAFPHLRVLEATARAGGR---IRSERCFGGVVEVGAHWIH 72 Query: 62 GPTQ-NRILRLAKELGL 77 GP++ N + +LA E GL Sbjct: 73 GPSRGNPVFQLAAEYGL 89 >gi|166795301 prenylcysteine oxidase 1 [Homo sapiens] Length = 505 Score = 42.0 bits (97), Expect = 0.001 Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 3/79 (3%) Query: 7 VVVVGGGISGMAAAKLLHDS-GLNVVV-LEARDRVGGRTYTLRNQKVKYVDLGGSYVGPT 64 + ++G GI G +AA L G +V + L R+ VGGR T+ Q +Y + GGS + P Sbjct: 37 IAIIGAGIGGTSAAYYLRQKFGKDVKIDLFEREEVGGRLATMMVQGQEY-EAGGSVIHPL 95 Query: 65 QNRILRLAKELGLETYKVN 83 + R K+LGL + + Sbjct: 96 NLHMKRFVKDLGLSAVQAS 114 >gi|170650615 protoporphyrinogen oxidase [Homo sapiens] Length = 477 Score = 41.6 bits (96), Expect = 0.002 Identities = 35/112 (31%), Positives = 52/112 (46%), Gaps = 20/112 (17%) Query: 7 VVVVGGGISGMAAAKLLHDSGL--NVVVLEARDRVGGRTYTLRNQKVKYVDLGGSYVGPT 64 VVV+GGGISG+AA+ L + VV++E+ +R+GG ++R +LG + P Sbjct: 5 VVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLGGWIRSVRGPNGAIFELGPRGIRPA 64 Query: 65 ---QNRILRLAKELGLETYKVNEVERLIHHVKGKSYPFRGPFPPVWNPITYL 113 R L L ELGL++ + P RG P N Y+ Sbjct: 65 GALGARTLLLVSELGLDS---------------EVLPVRGDHPAAQNRFLYV 101 >gi|4506001 protoporphyrinogen oxidase [Homo sapiens] Length = 477 Score = 41.6 bits (96), Expect = 0.002 Identities = 35/112 (31%), Positives = 52/112 (46%), Gaps = 20/112 (17%) Query: 7 VVVVGGGISGMAAAKLLHDSGL--NVVVLEARDRVGGRTYTLRNQKVKYVDLGGSYVGPT 64 VVV+GGGISG+AA+ L + VV++E+ +R+GG ++R +LG + P Sbjct: 5 VVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLGGWIRSVRGPNGAIFELGPRGIRPA 64 Query: 65 ---QNRILRLAKELGLETYKVNEVERLIHHVKGKSYPFRGPFPPVWNPITYL 113 R L L ELGL++ + P RG P N Y+ Sbjct: 65 GALGARTLLLVSELGLDS---------------EVLPVRGDHPAAQNRFLYV 101 >gi|229577391 pyridine nucleotide-disulphide oxidoreductase domain 2 [Homo sapiens] Length = 581 Score = 35.8 bits (81), Expect = 0.097 Identities = 17/40 (42%), Positives = 22/40 (55%) Query: 6 DVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGRTYT 45 D VV+G G +G+ AA L G+N V E R +GG T Sbjct: 36 DAVVIGAGHNGLVAAAYLQRLGVNTAVFERRHVIGGAAVT 75 >gi|221316678 flavin containing monooxygenase 5 isoform 3 [Homo sapiens] Length = 285 Score = 35.0 bits (79), Expect = 0.17 Identities = 14/35 (40%), Positives = 22/35 (62%) Query: 7 VVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGG 41 + V+GGG+SG+++ K + GL V E D +GG Sbjct: 6 IAVIGGGVSGLSSIKCCVEEGLEPVCFERTDDIGG 40 >gi|221316674 flavin containing monooxygenase 5 isoform 2 [Homo sapiens] Length = 464 Score = 35.0 bits (79), Expect = 0.17 Identities = 14/35 (40%), Positives = 22/35 (62%) Query: 7 VVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGG 41 + V+GGG+SG+++ K + GL V E D +GG Sbjct: 6 IAVIGGGVSGLSSIKCCVEEGLEPVCFERTDDIGG 40 >gi|221316672 flavin containing monooxygenase 5 isoform 1 [Homo sapiens] Length = 533 Score = 35.0 bits (79), Expect = 0.17 Identities = 14/35 (40%), Positives = 22/35 (62%) Query: 7 VVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGG 41 + V+GGG+SG+++ K + GL V E D +GG Sbjct: 6 IAVIGGGVSGLSSIKCCVEEGLEPVCFERTDDIGG 40 >gi|8923271 coiled-coil domain containing 49 [Homo sapiens] Length = 425 Score = 32.7 bits (73), Expect = 0.82 Identities = 30/120 (25%), Positives = 57/120 (47%), Gaps = 19/120 (15%) Query: 348 KARKLARLTKEERLKKLCELYAKVLGSLEALEPVHYEEKNWCEEQYSGGCYTTYFPPGIL 407 K +L R +EER ++ + YA+ +G+++ E E+ +W Y G P G++ Sbjct: 36 KIEELQRELREERAREEMQRYAEDVGAVKKKE----EKLDW---MYQG-------PGGMV 81 Query: 408 TQYGRVLRQPVDRIYFAGTET----ATHWSGYMEGAVEAGERAAREILHAMGKIPEDEIW 463 + +L +P+D+ F E + +G + G++ A A +L KI ED ++ Sbjct: 82 NRDEYLLGRPIDKYVFEKMEEKEAGCSSETGLLPGSIFA-PSGANSLLDMASKIREDPLF 140 >gi|171906567 peripheral benzodiazepine receptor-associated protein 1 isoform b [Homo sapiens] Length = 1797 Score = 32.3 bits (72), Expect = 1.1 Identities = 18/65 (27%), Positives = 34/65 (52%), Gaps = 1/65 (1%) Query: 29 NVVVLEARDRVGGRTYTLRNQKVKYVDLGGSYVGPTQNRILRLAKELGLETYKVNEVERL 88 N ++E R+ GR + + +L G +G TQ R L K GL++ K+ +E++ Sbjct: 319 NARLVEENSRLSGRATEKEQVEWENAELRGQLLGVTQERDSALRKSQGLQS-KLESLEQV 377 Query: 89 IHHVK 93 + H++ Sbjct: 378 LKHMR 382 >gi|171906559 peripheral benzodiazepine receptor-associated protein 1 isoform a [Homo sapiens] Length = 1857 Score = 32.3 bits (72), Expect = 1.1 Identities = 18/65 (27%), Positives = 34/65 (52%), Gaps = 1/65 (1%) Query: 29 NVVVLEARDRVGGRTYTLRNQKVKYVDLGGSYVGPTQNRILRLAKELGLETYKVNEVERL 88 N ++E R+ GR + + +L G +G TQ R L K GL++ K+ +E++ Sbjct: 379 NARLVEENSRLSGRATEKEQVEWENAELRGQLLGVTQERDSALRKSQGLQS-KLESLEQV 437 Query: 89 IHHVK 93 + H++ Sbjct: 438 LKHMR 442 >gi|4503755 flavin containing monooxygenase 1 [Homo sapiens] Length = 532 Score = 32.0 bits (71), Expect = 1.4 Identities = 14/35 (40%), Positives = 20/35 (57%) Query: 7 VVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGG 41 V +VG G+SG+A+ K + GL E D +GG Sbjct: 5 VAIVGAGVSGLASIKCCLEEGLEPTCFERSDDLGG 39 >gi|33519426 thioredoxin reductase 1 isoform 2 [Homo sapiens] Length = 499 Score = 30.8 bits (68), Expect = 3.1 Identities = 13/29 (44%), Positives = 20/29 (68%) Query: 6 DVVVVGGGISGMAAAKLLHDSGLNVVVLE 34 D++++GGG G+AAAK G V+VL+ Sbjct: 14 DLIIIGGGSGGLAAAKEAAQYGKKVMVLD 42 >gi|148277071 thioredoxin reductase 1 isoform 3 [Homo sapiens] Length = 649 Score = 30.8 bits (68), Expect = 3.1 Identities = 13/29 (44%), Positives = 20/29 (68%) Query: 6 DVVVVGGGISGMAAAKLLHDSGLNVVVLE 34 D++++GGG G+AAAK G V+VL+ Sbjct: 164 DLIIIGGGSGGLAAAKEAAQYGKKVMVLD 192 >gi|148277065 thioredoxin reductase 1 isoform 1 [Homo sapiens] Length = 551 Score = 30.8 bits (68), Expect = 3.1 Identities = 13/29 (44%), Positives = 20/29 (68%) Query: 6 DVVVVGGGISGMAAAKLLHDSGLNVVVLE 34 D++++GGG G+AAAK G V+VL+ Sbjct: 66 DLIIIGGGSGGLAAAKEAAQYGKKVMVLD 94 >gi|33519430 thioredoxin reductase 1 isoform 2 [Homo sapiens] Length = 499 Score = 30.8 bits (68), Expect = 3.1 Identities = 13/29 (44%), Positives = 20/29 (68%) Query: 6 DVVVVGGGISGMAAAKLLHDSGLNVVVLE 34 D++++GGG G+AAAK G V+VL+ Sbjct: 14 DLIIIGGGSGGLAAAKEAAQYGKKVMVLD 42 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.320 0.137 0.424 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 20,874,796 Number of Sequences: 37866 Number of extensions: 976856 Number of successful extensions: 2212 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 26 Number of HSP's successfully gapped in prelim test: 11 Number of HSP's that attempted gapping in prelim test: 2151 Number of HSP's gapped (non-prelim): 57 length of query: 520 length of database: 18,247,518 effective HSP length: 107 effective length of query: 413 effective length of database: 14,195,856 effective search space: 5862888528 effective search space used: 5862888528 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.