Guide to the Human Genome
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Name: PCYOX1 Sequence: fasta or formatted (505aa) NCBI GI: 166795301
Description:

prenylcysteine oxidase 1

Referenced in:

Prenylation and Related Modifications

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.3         32           2
 C cysteine            1.4          7           1
 D aspartate           4.8         24           2
 E glutamate           6.5         33           2
 F phenylalanine       4.2         21           1
 G glycine             7.9         40           2
 H histidine           2.4         12           1
 I isoleucine          6.3         32           2
 K lysine              5.9         30           2
 L leucine            11.3         57           3
 M methionine          3.2         16           2
 N asparagine          4.2         21           1
 P proline             3.6         18           2
 Q glutamine           3.0         15           1
 R arginine            3.6         18           1
 S serine              7.3         37           2
 T threonine           5.1         26           2
 V valine              6.5         33           2
 W tryptophan          1.6          8           1
 Y tyrosine            5.0         25           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   prenylcysteine oxidase 1 
PCYOX1L               0.377   prenylcysteine oxidase 1 like 
MAOA                  0.019   monoamine oxidase A 
MAOB                  0.017   monoamine oxidase B 
SMOX                  0.010   spermine oxidase isoform 4 
SMOX                  0.010   spermine oxidase isoform 3 
SMOX                  0.010   spermine oxidase isoform 2 
SMOX                  0.010   spermine oxidase isoform 1 
C21orf66              0.008   GC-rich sequence DNA-binding factor candidate isofor...
C21orf66              0.008   GC-rich sequence DNA-binding factor candidate isofor...
EFHB                  0.006   EF hand domain family, member B 
MAGEA8                0.005   melanoma antigen family A, 8 
P4HA2                 0.005   prolyl 4-hydroxylase, alpha II subunit isoform 1 pr...
P4HA2                 0.005   prolyl 4-hydroxylase, alpha II subunit isoform 1 prec...
RETSAT                0.005   all-trans-13,14-dihydroretinol saturase 
P4HA1                 0.004   prolyl 4-hydroxylase, alpha I subunit isoform 1 prec...
P4HA1                 0.004   prolyl 4-hydroxylase, alpha I subunit isoform 2 pre...
P4HA1                 0.004   prolyl 4-hydroxylase, alpha I subunit isoform 2 prec...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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