Search of human proteins with 38201628

Search of human proteins with 38201628

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|38201628 chorionic somatomammotropin hormone-like 1 isoform
3 [Homo sapiens]
         (128 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|12545381 chorionic somatomammotropin hormone-like 1 isoform 2...   261   8e-71
gi|12545378 chorionic somatomammotropin hormone-like 1 isoform 4...   261   8e-71
gi|12545376 chorionic somatomammotropin hormone-like 1 isoform 1...   261   8e-71
gi|38201628 chorionic somatomammotropin hormone-like 1 isoform 3...   261   8e-71
gi|4503083 chorionic somatomammotropin hormone 1 isoform 1 [Homo...   239   6e-64
gi|10334861 chorionic somatomammotropin hormone 2 isoform 1 [Hom...   239   6e-64
gi|13027812 growth hormone 1 isoform 1 [Homo sapiens]                 212   7e-56
gi|13027814 growth hormone 1 isoform 2 [Homo sapiens]                 212   7e-56
gi|13027816 growth hormone 1 isoform 3 [Homo sapiens]                 202   4e-53
gi|4503991 growth hormone 2 isoform 1 [Homo sapiens]                  195   9e-51
gi|13027822 growth hormone 2 isoform 4 [Homo sapiens]                 195   9e-51
gi|239756908 PREDICTED: similar to chorionic somatomammotropin h...   187   3e-48
gi|12408687 chorionic somatomammotropin hormone 1 isoform 3 [Hom...   130   3e-31
gi|12408694 chorionic somatomammotropin hormone 2 isoform 3 [Hom...   130   3e-31
gi|13027818 growth hormone 1 isoform 4 [Homo sapiens]                 123   4e-29
gi|12408685 chorionic somatomammotropin hormone 1 isoform 2 [Hom...   113   5e-26
gi|12408692 chorionic somatomammotropin hormone 2 isoform 2 [Hom...   113   5e-26
gi|13027826 growth hormone 2 isoform 3 [Homo sapiens]                  84   3e-17
gi|13027824 growth hormone 2 isoform 2 [Homo sapiens]                  83   5e-17
gi|4506105 prolactin precursor [Homo sapiens]                          36   0.007
gi|116008447 CAP-GLY domain containing linker protein 2 isoform ...    35   0.012
gi|14702162 CAP-GLY domain containing linker protein 2 isoform 2...    35   0.012
gi|197927265 RNA (guanine-9-) methyltransferase domain containin...    33   0.079
gi|197927261 RNA (guanine-9-) methyltransferase domain containin...    33   0.079
gi|22748659 RNA (guanine-9-) methyltransferase domain containing...    33   0.079
gi|10863937 tumor necrosis factor, alpha-induced protein 1 [Homo...    30   0.51 
gi|34452707 bromodomain containing 8 isoform 2 [Homo sapiens]          29   0.88 
gi|34452709 bromodomain containing 8 isoform 3 [Homo sapiens]          29   1.1  
gi|34452705 bromodomain containing 8 isoform 1 [Homo sapiens]          29   1.1  
gi|224458301 family with sequence similarity 186, member A [Homo...    28   2.0  

>gi|12545381 chorionic somatomammotropin hormone-like 1 isoform 2
           precursor [Homo sapiens]
          Length = 199

 Score =  261 bits (668), Expect = 8e-71
 Identities = 128/128 (100%), Positives = 128/128 (100%)

Query: 1   MEETQQKSNLELLHISLLLIESRLEPVRFLRSTFTNNLVYDTSDSDDYHLLKDLEEGIQM 60
           MEETQQKSNLELLHISLLLIESRLEPVRFLRSTFTNNLVYDTSDSDDYHLLKDLEEGIQM
Sbjct: 72  MEETQQKSNLELLHISLLLIESRLEPVRFLRSTFTNNLVYDTSDSDDYHLLKDLEEGIQM 131

Query: 61  LMGRLEDGSHLTGQTLKQTYSKFDTNSHNHDALLKNYGLLHCFRKDMDKVETFLRMVQCR 120
           LMGRLEDGSHLTGQTLKQTYSKFDTNSHNHDALLKNYGLLHCFRKDMDKVETFLRMVQCR
Sbjct: 132 LMGRLEDGSHLTGQTLKQTYSKFDTNSHNHDALLKNYGLLHCFRKDMDKVETFLRMVQCR 191

Query: 121 SVEGSCGF 128
           SVEGSCGF
Sbjct: 192 SVEGSCGF 199


>gi|12545378 chorionic somatomammotropin hormone-like 1 isoform 4
           [Homo sapiens]
          Length = 139

 Score =  261 bits (668), Expect = 8e-71
 Identities = 128/128 (100%), Positives = 128/128 (100%)

Query: 1   MEETQQKSNLELLHISLLLIESRLEPVRFLRSTFTNNLVYDTSDSDDYHLLKDLEEGIQM 60
           MEETQQKSNLELLHISLLLIESRLEPVRFLRSTFTNNLVYDTSDSDDYHLLKDLEEGIQM
Sbjct: 12  MEETQQKSNLELLHISLLLIESRLEPVRFLRSTFTNNLVYDTSDSDDYHLLKDLEEGIQM 71

Query: 61  LMGRLEDGSHLTGQTLKQTYSKFDTNSHNHDALLKNYGLLHCFRKDMDKVETFLRMVQCR 120
           LMGRLEDGSHLTGQTLKQTYSKFDTNSHNHDALLKNYGLLHCFRKDMDKVETFLRMVQCR
Sbjct: 72  LMGRLEDGSHLTGQTLKQTYSKFDTNSHNHDALLKNYGLLHCFRKDMDKVETFLRMVQCR 131

Query: 121 SVEGSCGF 128
           SVEGSCGF
Sbjct: 132 SVEGSCGF 139


>gi|12545376 chorionic somatomammotropin hormone-like 1 isoform 1
           precursor [Homo sapiens]
          Length = 222

 Score =  261 bits (668), Expect = 8e-71
 Identities = 128/128 (100%), Positives = 128/128 (100%)

Query: 1   MEETQQKSNLELLHISLLLIESRLEPVRFLRSTFTNNLVYDTSDSDDYHLLKDLEEGIQM 60
           MEETQQKSNLELLHISLLLIESRLEPVRFLRSTFTNNLVYDTSDSDDYHLLKDLEEGIQM
Sbjct: 95  MEETQQKSNLELLHISLLLIESRLEPVRFLRSTFTNNLVYDTSDSDDYHLLKDLEEGIQM 154

Query: 61  LMGRLEDGSHLTGQTLKQTYSKFDTNSHNHDALLKNYGLLHCFRKDMDKVETFLRMVQCR 120
           LMGRLEDGSHLTGQTLKQTYSKFDTNSHNHDALLKNYGLLHCFRKDMDKVETFLRMVQCR
Sbjct: 155 LMGRLEDGSHLTGQTLKQTYSKFDTNSHNHDALLKNYGLLHCFRKDMDKVETFLRMVQCR 214

Query: 121 SVEGSCGF 128
           SVEGSCGF
Sbjct: 215 SVEGSCGF 222


>gi|38201628 chorionic somatomammotropin hormone-like 1 isoform 3
           [Homo sapiens]
          Length = 128

 Score =  261 bits (668), Expect = 8e-71
 Identities = 128/128 (100%), Positives = 128/128 (100%)

Query: 1   MEETQQKSNLELLHISLLLIESRLEPVRFLRSTFTNNLVYDTSDSDDYHLLKDLEEGIQM 60
           MEETQQKSNLELLHISLLLIESRLEPVRFLRSTFTNNLVYDTSDSDDYHLLKDLEEGIQM
Sbjct: 1   MEETQQKSNLELLHISLLLIESRLEPVRFLRSTFTNNLVYDTSDSDDYHLLKDLEEGIQM 60

Query: 61  LMGRLEDGSHLTGQTLKQTYSKFDTNSHNHDALLKNYGLLHCFRKDMDKVETFLRMVQCR 120
           LMGRLEDGSHLTGQTLKQTYSKFDTNSHNHDALLKNYGLLHCFRKDMDKVETFLRMVQCR
Sbjct: 61  LMGRLEDGSHLTGQTLKQTYSKFDTNSHNHDALLKNYGLLHCFRKDMDKVETFLRMVQCR 120

Query: 121 SVEGSCGF 128
           SVEGSCGF
Sbjct: 121 SVEGSCGF 128


>gi|4503083 chorionic somatomammotropin hormone 1 isoform 1 [Homo
           sapiens]
          Length = 217

 Score =  239 bits (609), Expect = 6e-64
 Identities = 119/128 (92%), Positives = 120/128 (93%)

Query: 1   MEETQQKSNLELLHISLLLIESRLEPVRFLRSTFTNNLVYDTSDSDDYHLLKDLEEGIQM 60
           MEETQQKSNLELL ISLLLIES LEPVRFLRS F NNLVYDTSDSDDYHLLKDLEEGIQ 
Sbjct: 90  MEETQQKSNLELLRISLLLIESWLEPVRFLRSMFANNLVYDTSDSDDYHLLKDLEEGIQT 149

Query: 61  LMGRLEDGSHLTGQTLKQTYSKFDTNSHNHDALLKNYGLLHCFRKDMDKVETFLRMVQCR 120
           LMGRLEDGS  TGQ LKQTYSKFDTNSHNHDALLKNYGLL+CFRKDMDKVETFLRMVQCR
Sbjct: 150 LMGRLEDGSRRTGQILKQTYSKFDTNSHNHDALLKNYGLLYCFRKDMDKVETFLRMVQCR 209

Query: 121 SVEGSCGF 128
           SVEGSCGF
Sbjct: 210 SVEGSCGF 217


>gi|10334861 chorionic somatomammotropin hormone 2 isoform 1 [Homo
           sapiens]
          Length = 217

 Score =  239 bits (609), Expect = 6e-64
 Identities = 119/128 (92%), Positives = 120/128 (93%)

Query: 1   MEETQQKSNLELLHISLLLIESRLEPVRFLRSTFTNNLVYDTSDSDDYHLLKDLEEGIQM 60
           MEETQQKSNLELL ISLLLIES LEPVRFLRS F NNLVYDTSDSDDYHLLKDLEEGIQ 
Sbjct: 90  MEETQQKSNLELLRISLLLIESWLEPVRFLRSMFANNLVYDTSDSDDYHLLKDLEEGIQT 149

Query: 61  LMGRLEDGSHLTGQTLKQTYSKFDTNSHNHDALLKNYGLLHCFRKDMDKVETFLRMVQCR 120
           LMGRLEDGS  TGQ LKQTYSKFDTNSHNHDALLKNYGLL+CFRKDMDKVETFLRMVQCR
Sbjct: 150 LMGRLEDGSRRTGQILKQTYSKFDTNSHNHDALLKNYGLLYCFRKDMDKVETFLRMVQCR 209

Query: 121 SVEGSCGF 128
           SVEGSCGF
Sbjct: 210 SVEGSCGF 217


>gi|13027812 growth hormone 1 isoform 1 [Homo sapiens]
          Length = 217

 Score =  212 bits (539), Expect = 7e-56
 Identities = 107/127 (84%), Positives = 113/127 (88%)

Query: 2   EETQQKSNLELLHISLLLIESRLEPVRFLRSTFTNNLVYDTSDSDDYHLLKDLEEGIQML 61
           EETQQKSNLELL ISLLLI+S LEPV+FLRS F N+LVY  SDS+ Y LLKDLEEGIQ L
Sbjct: 91  EETQQKSNLELLRISLLLIQSWLEPVQFLRSVFANSLVYGASDSNVYDLLKDLEEGIQTL 150

Query: 62  MGRLEDGSHLTGQTLKQTYSKFDTNSHNHDALLKNYGLLHCFRKDMDKVETFLRMVQCRS 121
           MGRLEDGS  TGQ  KQTYSKFDTNSHN DALLKNYGLL+CFRKDMDKVETFLR+VQCRS
Sbjct: 151 MGRLEDGSPRTGQIFKQTYSKFDTNSHNDDALLKNYGLLYCFRKDMDKVETFLRIVQCRS 210

Query: 122 VEGSCGF 128
           VEGSCGF
Sbjct: 211 VEGSCGF 217


>gi|13027814 growth hormone 1 isoform 2 [Homo sapiens]
          Length = 202

 Score =  212 bits (539), Expect = 7e-56
 Identities = 107/127 (84%), Positives = 113/127 (88%)

Query: 2   EETQQKSNLELLHISLLLIESRLEPVRFLRSTFTNNLVYDTSDSDDYHLLKDLEEGIQML 61
           EETQQKSNLELL ISLLLI+S LEPV+FLRS F N+LVY  SDS+ Y LLKDLEEGIQ L
Sbjct: 76  EETQQKSNLELLRISLLLIQSWLEPVQFLRSVFANSLVYGASDSNVYDLLKDLEEGIQTL 135

Query: 62  MGRLEDGSHLTGQTLKQTYSKFDTNSHNHDALLKNYGLLHCFRKDMDKVETFLRMVQCRS 121
           MGRLEDGS  TGQ  KQTYSKFDTNSHN DALLKNYGLL+CFRKDMDKVETFLR+VQCRS
Sbjct: 136 MGRLEDGSPRTGQIFKQTYSKFDTNSHNDDALLKNYGLLYCFRKDMDKVETFLRIVQCRS 195

Query: 122 VEGSCGF 128
           VEGSCGF
Sbjct: 196 VEGSCGF 202


>gi|13027816 growth hormone 1 isoform 3 [Homo sapiens]
          Length = 177

 Score =  202 bits (515), Expect = 4e-53
 Identities = 102/126 (80%), Positives = 110/126 (87%)

Query: 3   ETQQKSNLELLHISLLLIESRLEPVRFLRSTFTNNLVYDTSDSDDYHLLKDLEEGIQMLM 62
           +T Q+ NLELL ISLLLI+S LEPV+FLRS F N+LVY  SDS+ Y LLKDLEEGIQ LM
Sbjct: 52  DTYQEFNLELLRISLLLIQSWLEPVQFLRSVFANSLVYGASDSNVYDLLKDLEEGIQTLM 111

Query: 63  GRLEDGSHLTGQTLKQTYSKFDTNSHNHDALLKNYGLLHCFRKDMDKVETFLRMVQCRSV 122
           GRLEDGS  TGQ  KQTYSKFDTNSHN DALLKNYGLL+CFRKDMDKVETFLR+VQCRSV
Sbjct: 112 GRLEDGSPRTGQIFKQTYSKFDTNSHNDDALLKNYGLLYCFRKDMDKVETFLRIVQCRSV 171

Query: 123 EGSCGF 128
           EGSCGF
Sbjct: 172 EGSCGF 177


>gi|4503991 growth hormone 2 isoform 1 [Homo sapiens]
          Length = 217

 Score =  195 bits (495), Expect = 9e-51
 Identities = 99/126 (78%), Positives = 107/126 (84%)

Query: 3   ETQQKSNLELLHISLLLIESRLEPVRFLRSTFTNNLVYDTSDSDDYHLLKDLEEGIQMLM 62
           +TQQKSNLELL ISLLLI+S LEPV+ LRS F N+LVY  SDS+ Y  LKDLEEGIQ LM
Sbjct: 92  KTQQKSNLELLRISLLLIQSWLEPVQLLRSVFANSLVYGASDSNVYRHLKDLEEGIQTLM 151

Query: 63  GRLEDGSHLTGQTLKQTYSKFDTNSHNHDALLKNYGLLHCFRKDMDKVETFLRMVQCRSV 122
            RLEDGS  TGQ   Q+YSKFDT SHN DALLKNYGLL+CFRKDMDKVETFLR+VQCRSV
Sbjct: 152 WRLEDGSPRTGQIFNQSYSKFDTKSHNDDALLKNYGLLYCFRKDMDKVETFLRIVQCRSV 211

Query: 123 EGSCGF 128
           EGSCGF
Sbjct: 212 EGSCGF 217


>gi|13027822 growth hormone 2 isoform 4 [Homo sapiens]
          Length = 202

 Score =  195 bits (495), Expect = 9e-51
 Identities = 99/126 (78%), Positives = 107/126 (84%)

Query: 3   ETQQKSNLELLHISLLLIESRLEPVRFLRSTFTNNLVYDTSDSDDYHLLKDLEEGIQMLM 62
           +TQQKSNLELL ISLLLI+S LEPV+ LRS F N+LVY  SDS+ Y  LKDLEEGIQ LM
Sbjct: 77  KTQQKSNLELLRISLLLIQSWLEPVQLLRSVFANSLVYGASDSNVYRHLKDLEEGIQTLM 136

Query: 63  GRLEDGSHLTGQTLKQTYSKFDTNSHNHDALLKNYGLLHCFRKDMDKVETFLRMVQCRSV 122
            RLEDGS  TGQ   Q+YSKFDT SHN DALLKNYGLL+CFRKDMDKVETFLR+VQCRSV
Sbjct: 137 WRLEDGSPRTGQIFNQSYSKFDTKSHNDDALLKNYGLLYCFRKDMDKVETFLRIVQCRSV 196

Query: 123 EGSCGF 128
           EGSCGF
Sbjct: 197 EGSCGF 202


>gi|239756908 PREDICTED: similar to chorionic somatomammotropin
           hormone 2 [Homo sapiens]
          Length = 96

 Score =  187 bits (474), Expect = 3e-48
 Identities = 89/95 (93%), Positives = 90/95 (94%)

Query: 34  FTNNLVYDTSDSDDYHLLKDLEEGIQMLMGRLEDGSHLTGQTLKQTYSKFDTNSHNHDAL 93
           F NNLVYDTSDSDDYHLLKDLEEGIQ LMGRLEDGS  TGQ LKQTYSKFDTNSHNHDAL
Sbjct: 2   FANNLVYDTSDSDDYHLLKDLEEGIQTLMGRLEDGSRRTGQILKQTYSKFDTNSHNHDAL 61

Query: 94  LKNYGLLHCFRKDMDKVETFLRMVQCRSVEGSCGF 128
           LKNYGLL+CFRKDMDKVETFLRMVQCRSVEGSCGF
Sbjct: 62  LKNYGLLYCFRKDMDKVETFLRMVQCRSVEGSCGF 96


>gi|12408687 chorionic somatomammotropin hormone 1 isoform 3 [Homo
           sapiens]
          Length = 122

 Score =  130 bits (327), Expect = 3e-31
 Identities = 61/65 (93%), Positives = 62/65 (95%)

Query: 64  RLEDGSHLTGQTLKQTYSKFDTNSHNHDALLKNYGLLHCFRKDMDKVETFLRMVQCRSVE 123
           RLEDGS  TGQ LKQTYSKFDTNSHNHDALLKNYGLL+CFRKDMDKVETFLRMVQCRSVE
Sbjct: 58  RLEDGSRRTGQILKQTYSKFDTNSHNHDALLKNYGLLYCFRKDMDKVETFLRMVQCRSVE 117

Query: 124 GSCGF 128
           GSCGF
Sbjct: 118 GSCGF 122


>gi|12408694 chorionic somatomammotropin hormone 2 isoform 3 [Homo
           sapiens]
          Length = 122

 Score =  130 bits (327), Expect = 3e-31
 Identities = 61/65 (93%), Positives = 62/65 (95%)

Query: 64  RLEDGSHLTGQTLKQTYSKFDTNSHNHDALLKNYGLLHCFRKDMDKVETFLRMVQCRSVE 123
           RLEDGS  TGQ LKQTYSKFDTNSHNHDALLKNYGLL+CFRKDMDKVETFLRMVQCRSVE
Sbjct: 58  RLEDGSRRTGQILKQTYSKFDTNSHNHDALLKNYGLLYCFRKDMDKVETFLRMVQCRSVE 117

Query: 124 GSCGF 128
           GSCGF
Sbjct: 118 GSCGF 122


>gi|13027818 growth hormone 1 isoform 4 [Homo sapiens]
          Length = 122

 Score =  123 bits (308), Expect = 4e-29
 Identities = 58/65 (89%), Positives = 60/65 (92%)

Query: 64  RLEDGSHLTGQTLKQTYSKFDTNSHNHDALLKNYGLLHCFRKDMDKVETFLRMVQCRSVE 123
           RLEDGS  TGQ  KQTYSKFDTNSHN DALLKNYGLL+CFRKDMDKVETFLR+VQCRSVE
Sbjct: 58  RLEDGSPRTGQIFKQTYSKFDTNSHNDDALLKNYGLLYCFRKDMDKVETFLRIVQCRSVE 117

Query: 124 GSCGF 128
           GSCGF
Sbjct: 118 GSCGF 122


>gi|12408685 chorionic somatomammotropin hormone 1 isoform 2 [Homo
           sapiens]
          Length = 256

 Score =  113 bits (282), Expect = 5e-26
 Identities = 58/63 (92%), Positives = 58/63 (92%)

Query: 1   MEETQQKSNLELLHISLLLIESRLEPVRFLRSTFTNNLVYDTSDSDDYHLLKDLEEGIQM 60
           MEETQQKSNLELL ISLLLIES LEPVRFLRS F NNLVYDTSDSDDYHLLKDLEEGIQ 
Sbjct: 90  MEETQQKSNLELLRISLLLIESWLEPVRFLRSMFANNLVYDTSDSDDYHLLKDLEEGIQT 149

Query: 61  LMG 63
           LMG
Sbjct: 150 LMG 152


>gi|12408692 chorionic somatomammotropin hormone 2 isoform 2 [Homo
           sapiens]
          Length = 167

 Score =  113 bits (282), Expect = 5e-26
 Identities = 58/63 (92%), Positives = 58/63 (92%)

Query: 1   MEETQQKSNLELLHISLLLIESRLEPVRFLRSTFTNNLVYDTSDSDDYHLLKDLEEGIQM 60
           MEETQQKSNLELL ISLLLIES LEPVRFLRS F NNLVYDTSDSDDYHLLKDLEEGIQ 
Sbjct: 90  MEETQQKSNLELLRISLLLIESWLEPVRFLRSMFANNLVYDTSDSDDYHLLKDLEEGIQT 149

Query: 61  LMG 63
           LMG
Sbjct: 150 LMG 152


>gi|13027826 growth hormone 2 isoform 3 [Homo sapiens]
          Length = 245

 Score = 84.0 bits (206), Expect = 3e-17
 Identities = 44/61 (72%), Positives = 50/61 (81%)

Query: 3   ETQQKSNLELLHISLLLIESRLEPVRFLRSTFTNNLVYDTSDSDDYHLLKDLEEGIQMLM 62
           +TQQKSNLELL ISLLLI+S LEPV+ LRS F N+LVY  SDS+ Y  LKDLEEGIQ L+
Sbjct: 92  KTQQKSNLELLRISLLLIQSWLEPVQLLRSVFANSLVYGASDSNVYRHLKDLEEGIQTLI 151

Query: 63  G 63
           G
Sbjct: 152 G 152


>gi|13027824 growth hormone 2 isoform 2 [Homo sapiens]
          Length = 256

 Score = 83.2 bits (204), Expect = 5e-17
 Identities = 44/60 (73%), Positives = 49/60 (81%)

Query: 3   ETQQKSNLELLHISLLLIESRLEPVRFLRSTFTNNLVYDTSDSDDYHLLKDLEEGIQMLM 62
           +TQQKSNLELL ISLLLI+S LEPV+ LRS F N+LVY  SDS+ Y  LKDLEEGIQ LM
Sbjct: 92  KTQQKSNLELLRISLLLIQSWLEPVQLLRSVFANSLVYGASDSNVYRHLKDLEEGIQTLM 151


>gi|4506105 prolactin precursor [Homo sapiens]
          Length = 227

 Score = 36.2 bits (82), Expect = 0.007
 Identities = 11/29 (37%), Positives = 21/29 (72%)

Query: 97  YGLLHCFRKDMDKVETFLRMVQCRSVEGS 125
           Y LLHC R+D  K++ +L++++CR +  +
Sbjct: 197 YNLLHCLRRDSHKIDNYLKLLKCRIIHNN 225


>gi|116008447 CAP-GLY domain containing linker protein 2 isoform 1
           [Homo sapiens]
          Length = 1046

 Score = 35.4 bits (80), Expect = 0.012
 Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 7/100 (7%)

Query: 3   ETQQKSNLELLHISLLLIESRLEPVRFLRSTFTNNLVYDTSDSDDYHLLKDLEEGIQ-ML 61
           E Q K  +E L   LL+ E+RL+ V  L S+   +++     S++    K+  EG+Q  L
Sbjct: 773 EAQGKQEVESLREKLLVAENRLQAVEALCSSQHTHMIESNDISEETIRTKETVEGLQDKL 832

Query: 62  MGRLEDGSHLTGQT------LKQTYSKFDTNSHNHDALLK 95
             R ++ + LT QT      +    SK  +     DALLK
Sbjct: 833 NKRDKEVTALTSQTEMLRAQVSALESKCKSGEKKVDALLK 872


>gi|14702162 CAP-GLY domain containing linker protein 2 isoform 2
           [Homo sapiens]
          Length = 1011

 Score = 35.4 bits (80), Expect = 0.012
 Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 7/100 (7%)

Query: 3   ETQQKSNLELLHISLLLIESRLEPVRFLRSTFTNNLVYDTSDSDDYHLLKDLEEGIQ-ML 61
           E Q K  +E L   LL+ E+RL+ V  L S+   +++     S++    K+  EG+Q  L
Sbjct: 738 EAQGKQEVESLREKLLVAENRLQAVEALCSSQHTHMIESNDISEETIRTKETVEGLQDKL 797

Query: 62  MGRLEDGSHLTGQT------LKQTYSKFDTNSHNHDALLK 95
             R ++ + LT QT      +    SK  +     DALLK
Sbjct: 798 NKRDKEVTALTSQTEMLRAQVSALESKCKSGEKKVDALLK 837


>gi|197927265 RNA (guanine-9-) methyltransferase domain containing 2
           [Homo sapiens]
          Length = 339

 Score = 32.7 bits (73), Expect = 0.079
 Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 2/55 (3%)

Query: 24  LEPVRFLRSTFTNNLVYDTSDSDDYHLLKDLEEGIQMLMGRLEDGSHLTGQTLKQ 78
           ++P  +       +L+Y TSDS +  +LK+L+E    ++G L D +H  G T KQ
Sbjct: 169 IKPEHYSELIKKEDLIYLTSDSPN--ILKELDESKAYVIGGLVDHNHHKGLTYKQ 221


>gi|197927261 RNA (guanine-9-) methyltransferase domain containing 2
           [Homo sapiens]
          Length = 339

 Score = 32.7 bits (73), Expect = 0.079
 Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 2/55 (3%)

Query: 24  LEPVRFLRSTFTNNLVYDTSDSDDYHLLKDLEEGIQMLMGRLEDGSHLTGQTLKQ 78
           ++P  +       +L+Y TSDS +  +LK+L+E    ++G L D +H  G T KQ
Sbjct: 169 IKPEHYSELIKKEDLIYLTSDSPN--ILKELDESKAYVIGGLVDHNHHKGLTYKQ 221


>gi|22748659 RNA (guanine-9-) methyltransferase domain containing 2
           [Homo sapiens]
          Length = 339

 Score = 32.7 bits (73), Expect = 0.079
 Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 2/55 (3%)

Query: 24  LEPVRFLRSTFTNNLVYDTSDSDDYHLLKDLEEGIQMLMGRLEDGSHLTGQTLKQ 78
           ++P  +       +L+Y TSDS +  +LK+L+E    ++G L D +H  G T KQ
Sbjct: 169 IKPEHYSELIKKEDLIYLTSDSPN--ILKELDESKAYVIGGLVDHNHHKGLTYKQ 221


>gi|10863937 tumor necrosis factor, alpha-induced protein 1 [Homo
           sapiens]
          Length = 316

 Score = 30.0 bits (66), Expect = 0.51
 Identities = 19/37 (51%), Positives = 24/37 (64%), Gaps = 1/37 (2%)

Query: 19  LIESRLEPVRFLRSTFTNNLVYDTSDSDDYHLLKDLE 55
           LIES  +PV  L    +NN    TS+SDD HLLK++E
Sbjct: 149 LIESSTKPVVKLLYNRSNNKYSYTSNSDD-HLLKNIE 184


>gi|34452707 bromodomain containing 8 isoform 2 [Homo sapiens]
          Length = 1235

 Score = 29.3 bits (64), Expect = 0.88
 Identities = 27/98 (27%), Positives = 44/98 (44%), Gaps = 15/98 (15%)

Query: 19  LIESRLEPVRFLRSTFTNNLVYDTSDSDDYHLLKDLEEGI----------QMLMGRLEDG 68
           LI S  E  R +   F N ++Y++SD D YH+  +++  +          Q++M   E G
Sbjct: 765 LIRSTAEFQRDIMLMFQNAVMYNSSDHDVYHMAVEMQRDVLEQIQQFLATQLIMQTSESG 824

Query: 69  ---SHLTGQ--TLKQTYSKFDTNSHNHDALLKNYGLLH 101
                L G+  T KQ  S+ D+      A L +  + H
Sbjct: 825 ISAKSLRGRDSTRKQDASEKDSVPMGSPAFLLSLFMGH 862


>gi|34452709 bromodomain containing 8 isoform 3 [Homo sapiens]
          Length = 757

 Score = 28.9 bits (63), Expect = 1.1
 Identities = 13/40 (32%), Positives = 23/40 (57%)

Query: 19  LIESRLEPVRFLRSTFTNNLVYDTSDSDDYHLLKDLEEGI 58
           LI S  E  R +   F N ++Y++SD D YH+  +++  +
Sbjct: 659 LIRSTAEFQRDIMLMFQNAVMYNSSDHDVYHMAVEMQRDV 698


>gi|34452705 bromodomain containing 8 isoform 1 [Homo sapiens]
          Length = 951

 Score = 28.9 bits (63), Expect = 1.1
 Identities = 13/40 (32%), Positives = 23/40 (57%)

Query: 19  LIESRLEPVRFLRSTFTNNLVYDTSDSDDYHLLKDLEEGI 58
           LI S  E  R +   F N ++Y++SD D YH+  +++  +
Sbjct: 838 LIRSTAEFQRDIMLMFQNAVMYNSSDHDVYHMAVEMQRDV 877


>gi|224458301 family with sequence similarity 186, member A [Homo
           sapiens]
          Length = 2351

 Score = 28.1 bits (61), Expect = 2.0
 Identities = 20/86 (23%), Positives = 37/86 (43%), Gaps = 6/86 (6%)

Query: 8   SNLELLHISLLLIESRLEPVRFLRSTFTNNLVYDTSDSDDYHLLKDLEEGIQMLMGRLED 67
           S +  L  +L ++   L+ V F  ST   +   +        +++DL    +ML  +L+D
Sbjct: 263 STIVNLSTALSMLNDELKCVNFQSSTVYAHETSEAEKELSLKIIRDLSNENEMLQQKLQD 322

Query: 68  GSHLTGQ------TLKQTYSKFDTNS 87
                 Q       ++Q Y+K  T+S
Sbjct: 323 AEEKCEQLIRSKIVIEQLYAKLSTSS 348


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.135    0.389 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,372,046
Number of Sequences: 37866
Number of extensions: 167062
Number of successful extensions: 484
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 442
Number of HSP's gapped (non-prelim): 58
length of query: 128
length of database: 18,247,518
effective HSP length: 90
effective length of query: 38
effective length of database: 14,839,578
effective search space: 563903964
effective search space used: 563903964
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.