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Search of human proteins with 38146118
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|38146118 hypothetical protein LOC10712 isoform b [Homo
sapiens]
(572 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|38146118 hypothetical protein LOC10712 isoform b [Homo sapiens] 1175 0.0
gi|38146116 hypothetical protein LOC10712 isoform a [Homo sapiens] 1030 0.0
gi|166795252 hypothetical protein LOC23359 [Homo sapiens] 130 3e-30
gi|189027139 chromosome 9 open reading frame 61 [Homo sapiens] 58 2e-08
gi|189027135 chromosome 9 open reading frame 61 [Homo sapiens] 58 2e-08
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 45 2e-04
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 45 2e-04
gi|112734870 hypothetical protein LOC57648 [Homo sapiens] 44 3e-04
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 44 3e-04
gi|163965366 nascent polypeptide-associated complex alpha subuni... 44 3e-04
gi|209180481 Cas-Br-M (murine) ecotropic retroviral transforming... 43 7e-04
gi|56549666 tyrosine kinase, non-receptor, 2 isoform 1 [Homo sap... 43 9e-04
gi|58331191 tyrosine kinase, non-receptor, 2 isoform 2 [Homo sap... 43 9e-04
gi|224451135 splicing factor, arginine/serine-rich 15 isoform 3 ... 43 9e-04
gi|112789555 ADAM metallopeptidase with thrombospondin type 1 mo... 42 0.002
gi|89040432 PREDICTED: hypothetical protein [Homo sapiens] 41 0.003
gi|122937267 lemur tyrosine kinase 3 [Homo sapiens] 41 0.003
gi|153792074 proline rich 12 [Homo sapiens] 41 0.003
gi|222136583 inositol polyphosphate phosphatase-like 1 [Homo sap... 41 0.003
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 40 0.004
gi|55750053 atrophin-1 [Homo sapiens] 40 0.004
gi|55750041 atrophin-1 [Homo sapiens] 40 0.004
gi|19924099 synapsin I isoform Ia [Homo sapiens] 40 0.004
gi|19924097 synapsin I isoform Ib [Homo sapiens] 40 0.004
gi|239754138 PREDICTED: hypothetical protein [Homo sapiens] 40 0.006
gi|239742631 PREDICTED: hypothetical protein XP_002342600 [Homo ... 40 0.006
gi|24850117 misshapen/NIK-related kinase isoform 2 [Homo sapiens] 40 0.006
gi|224451133 splicing factor, arginine/serine-rich 15 isoform 2 ... 40 0.006
gi|40789229 splicing factor, arginine/serine-rich 15 isoform 1 [... 40 0.006
gi|77681565 NG5 protein [Homo sapiens] 40 0.006
>gi|38146118 hypothetical protein LOC10712 isoform b [Homo sapiens]
Length = 572
Score = 1175 bits (3040), Expect = 0.0
Identities = 572/572 (100%), Positives = 572/572 (100%)
Query: 1 MMPSPSDSSRSLTSRPSTRGLTHLRLHRPWLQALLTLGLVQVLLGILVVTFSMVASSVTT 60
MMPSPSDSSRSLTSRPSTRGLTHLRLHRPWLQALLTLGLVQVLLGILVVTFSMVASSVTT
Sbjct: 1 MMPSPSDSSRSLTSRPSTRGLTHLRLHRPWLQALLTLGLVQVLLGILVVTFSMVASSVTT 60
Query: 61 TESIKRSCPSWAGFSNLLFSVCGLTICAAIICTLSAIVCCIQIFSLDLVHTLAPERSVSG 120
TESIKRSCPSWAGFSNLLFSVCGLTICAAIICTLSAIVCCIQIFSLDLVHTLAPERSVSG
Sbjct: 61 TESIKRSCPSWAGFSNLLFSVCGLTICAAIICTLSAIVCCIQIFSLDLVHTLAPERSVSG 120
Query: 121 PLGPLGCTSPPPAPLLHTMLDLEEFVPPVPPPPYYPPEYTCSSETDAQSITYNGSMDSPV 180
PLGPLGCTSPPPAPLLHTMLDLEEFVPPVPPPPYYPPEYTCSSETDAQSITYNGSMDSPV
Sbjct: 121 PLGPLGCTSPPPAPLLHTMLDLEEFVPPVPPPPYYPPEYTCSSETDAQSITYNGSMDSPV 180
Query: 181 PLYPTDCPPSYEAVMGLRGDSQATLFDPQLHDGSCICERVASIVDVSMDSGSLVLSAIGD 240
PLYPTDCPPSYEAVMGLRGDSQATLFDPQLHDGSCICERVASIVDVSMDSGSLVLSAIGD
Sbjct: 181 PLYPTDCPPSYEAVMGLRGDSQATLFDPQLHDGSCICERVASIVDVSMDSGSLVLSAIGD 240
Query: 241 LPGGSSPSEDSCLLELQGSVRSVDYVLFRSIQRSRAGYCLSLDCGLRGPFEESPLPRRPP 300
LPGGSSPSEDSCLLELQGSVRSVDYVLFRSIQRSRAGYCLSLDCGLRGPFEESPLPRRPP
Sbjct: 241 LPGGSSPSEDSCLLELQGSVRSVDYVLFRSIQRSRAGYCLSLDCGLRGPFEESPLPRRPP 300
Query: 301 RAARSYSCSAPEAPPPLGAPTAARSCHRLEGWPPWVGPCFPELRRRVPRGGGRPAAAPPT 360
RAARSYSCSAPEAPPPLGAPTAARSCHRLEGWPPWVGPCFPELRRRVPRGGGRPAAAPPT
Sbjct: 301 RAARSYSCSAPEAPPPLGAPTAARSCHRLEGWPPWVGPCFPELRRRVPRGGGRPAAAPPT 360
Query: 361 RAPTRRFSDSSGSLTPPGHRPPHPASPPPLLLPRSHSDPGITTSSDTADFRDLYTKVLEE 420
RAPTRRFSDSSGSLTPPGHRPPHPASPPPLLLPRSHSDPGITTSSDTADFRDLYTKVLEE
Sbjct: 361 RAPTRRFSDSSGSLTPPGHRPPHPASPPPLLLPRSHSDPGITTSSDTADFRDLYTKVLEE 420
Query: 421 EAASVSSADTGLCSEACLFRLARCPSPKLLRARSAEKRRPVPTFQKVPLPSGPAPAHSLG 480
EAASVSSADTGLCSEACLFRLARCPSPKLLRARSAEKRRPVPTFQKVPLPSGPAPAHSLG
Sbjct: 421 EAASVSSADTGLCSEACLFRLARCPSPKLLRARSAEKRRPVPTFQKVPLPSGPAPAHSLG 480
Query: 481 DLKGSWPGRGLVTRFLQISRKAPDPSGTGAHGHKQVPRSLWGRPGRESLHLRSCGDLSSS 540
DLKGSWPGRGLVTRFLQISRKAPDPSGTGAHGHKQVPRSLWGRPGRESLHLRSCGDLSSS
Sbjct: 481 DLKGSWPGRGLVTRFLQISRKAPDPSGTGAHGHKQVPRSLWGRPGRESLHLRSCGDLSSS 540
Query: 541 SSLRRLLSGRRLERGTRPHSLSLNGGSRETGL 572
SSLRRLLSGRRLERGTRPHSLSLNGGSRETGL
Sbjct: 541 SSLRRLLSGRRLERGTRPHSLSLNGGSRETGL 572
>gi|38146116 hypothetical protein LOC10712 isoform a [Homo sapiens]
Length = 668
Score = 1030 bits (2663), Expect = 0.0
Identities = 497/497 (100%), Positives = 497/497 (100%)
Query: 76 NLLFSVCGLTICAAIICTLSAIVCCIQIFSLDLVHTLAPERSVSGPLGPLGCTSPPPAPL 135
NLLFSVCGLTICAAIICTLSAIVCCIQIFSLDLVHTLAPERSVSGPLGPLGCTSPPPAPL
Sbjct: 172 NLLFSVCGLTICAAIICTLSAIVCCIQIFSLDLVHTLAPERSVSGPLGPLGCTSPPPAPL 231
Query: 136 LHTMLDLEEFVPPVPPPPYYPPEYTCSSETDAQSITYNGSMDSPVPLYPTDCPPSYEAVM 195
LHTMLDLEEFVPPVPPPPYYPPEYTCSSETDAQSITYNGSMDSPVPLYPTDCPPSYEAVM
Sbjct: 232 LHTMLDLEEFVPPVPPPPYYPPEYTCSSETDAQSITYNGSMDSPVPLYPTDCPPSYEAVM 291
Query: 196 GLRGDSQATLFDPQLHDGSCICERVASIVDVSMDSGSLVLSAIGDLPGGSSPSEDSCLLE 255
GLRGDSQATLFDPQLHDGSCICERVASIVDVSMDSGSLVLSAIGDLPGGSSPSEDSCLLE
Sbjct: 292 GLRGDSQATLFDPQLHDGSCICERVASIVDVSMDSGSLVLSAIGDLPGGSSPSEDSCLLE 351
Query: 256 LQGSVRSVDYVLFRSIQRSRAGYCLSLDCGLRGPFEESPLPRRPPRAARSYSCSAPEAPP 315
LQGSVRSVDYVLFRSIQRSRAGYCLSLDCGLRGPFEESPLPRRPPRAARSYSCSAPEAPP
Sbjct: 352 LQGSVRSVDYVLFRSIQRSRAGYCLSLDCGLRGPFEESPLPRRPPRAARSYSCSAPEAPP 411
Query: 316 PLGAPTAARSCHRLEGWPPWVGPCFPELRRRVPRGGGRPAAAPPTRAPTRRFSDSSGSLT 375
PLGAPTAARSCHRLEGWPPWVGPCFPELRRRVPRGGGRPAAAPPTRAPTRRFSDSSGSLT
Sbjct: 412 PLGAPTAARSCHRLEGWPPWVGPCFPELRRRVPRGGGRPAAAPPTRAPTRRFSDSSGSLT 471
Query: 376 PPGHRPPHPASPPPLLLPRSHSDPGITTSSDTADFRDLYTKVLEEEAASVSSADTGLCSE 435
PPGHRPPHPASPPPLLLPRSHSDPGITTSSDTADFRDLYTKVLEEEAASVSSADTGLCSE
Sbjct: 472 PPGHRPPHPASPPPLLLPRSHSDPGITTSSDTADFRDLYTKVLEEEAASVSSADTGLCSE 531
Query: 436 ACLFRLARCPSPKLLRARSAEKRRPVPTFQKVPLPSGPAPAHSLGDLKGSWPGRGLVTRF 495
ACLFRLARCPSPKLLRARSAEKRRPVPTFQKVPLPSGPAPAHSLGDLKGSWPGRGLVTRF
Sbjct: 532 ACLFRLARCPSPKLLRARSAEKRRPVPTFQKVPLPSGPAPAHSLGDLKGSWPGRGLVTRF 591
Query: 496 LQISRKAPDPSGTGAHGHKQVPRSLWGRPGRESLHLRSCGDLSSSSSLRRLLSGRRLERG 555
LQISRKAPDPSGTGAHGHKQVPRSLWGRPGRESLHLRSCGDLSSSSSLRRLLSGRRLERG
Sbjct: 592 LQISRKAPDPSGTGAHGHKQVPRSLWGRPGRESLHLRSCGDLSSSSSLRRLLSGRRLERG 651
Query: 556 TRPHSLSLNGGSRETGL 572
TRPHSLSLNGGSRETGL
Sbjct: 652 TRPHSLSLNGGSRETGL 668
Score = 151 bits (382), Expect = 1e-36
Identities = 77/84 (91%), Positives = 78/84 (92%)
Query: 1 MMPSPSDSSRSLTSRPSTRGLTHLRLHRPWLQALLTLGLVQVLLGILVVTFSMVASSVTT 60
MMPSPSDSSRSLTSRPSTRGLTHLRLHRPWLQALLTLGLVQVLLGILVVTFSMVASSVTT
Sbjct: 1 MMPSPSDSSRSLTSRPSTRGLTHLRLHRPWLQALLTLGLVQVLLGILVVTFSMVASSVTT 60
Query: 61 TESIKRSCPSWAGFSNLLFSVCGL 84
TESIKRSCPSWAGFS V G+
Sbjct: 61 TESIKRSCPSWAGFSLAFSGVVGI 84
>gi|166795252 hypothetical protein LOC23359 [Homo sapiens]
Length = 539
Score = 130 bits (327), Expect = 3e-30
Identities = 76/189 (40%), Positives = 105/189 (55%), Gaps = 19/189 (10%)
Query: 76 NLLFSVCGLTICAAIICTLSAIVCCIQIFSLDLVHTLAPERSVSGPLGPLGCTSPPPAPL 135
+LLFSVC L + + I+C L+ +CC+Q+ S D++ P+RS P P T P +
Sbjct: 175 DLLFSVCALNVLSTIVCALATAMCCMQMVSSDVLQMFLPQRS--HPANPTCVT--PHGTV 230
Query: 136 LHTMLDLEEFVPPVPPPPYYPPEYTCSSETDAQ------------SITYNGSMDSPVPLY 183
LH LD +EF+PP+PPPPYYPPEYTC+ T+AQ Y+ +++SP LY
Sbjct: 231 LHQTLDFDEFIPPLPPPPYYPPEYTCTPSTEAQRGLHLDFAPSPFGTLYDVAINSPGLLY 290
Query: 184 PTDCPPSYEAVMGLRGDSQATLFDPQLHDGSCICERVAS--IVDVSMDSGSLVLSAIGDL 241
P + PP YEAV+G SQ T Q+ + S ++ V DS SL++S G
Sbjct: 291 PAELPPPYEAVVGQPPASQVTSIGQQVAESSSGDPNTSAGFSTPVPADSTSLLVSE-GTA 349
Query: 242 PGGSSPSED 250
GSSPS D
Sbjct: 350 TPGSSPSPD 358
Score = 52.8 bits (125), Expect = 9e-07
Identities = 29/80 (36%), Positives = 43/80 (53%)
Query: 5 PSDSSRSLTSRPSTRGLTHLRLHRPWLQALLTLGLVQVLLGILVVTFSMVASSVTTTESI 64
P+ R+ R L+ LR + +L LG Q+ LG L+V S A ++TT+ +
Sbjct: 3 PAGGPRAPRPAALPRSLSRLRECPGRSRIVLALGATQMALGCLIVAVSFAALALTTSARV 62
Query: 65 KRSCPSWAGFSNLLFSVCGL 84
+ SCP WAGFS LL + G+
Sbjct: 63 RHSCPFWAGFSVLLSGLIGV 82
Score = 43.1 bits (100), Expect = 7e-04
Identities = 50/168 (29%), Positives = 70/168 (41%), Gaps = 20/168 (11%)
Query: 347 VPRGGGRPAAAPPTRAPTRRFSDSSGSLTPPGHRPPHP------ASPPPLLLPRSHSDPG 400
V G P ++P P + S +L PPGH P P P + RS SDP
Sbjct: 344 VSEGTATPGSSPSPDGPVGAPAPSEPAL-PPGHVSPEDPGMGSQVQPGPGRVSRSTSDPT 402
Query: 401 ITTSS---DTADFRDLYTKVLE---EEAASVSSADTGLCSEACLFRLARCPSPKLLRARS 454
+ TSS D + R ++ LE EA S++ + + AC +L+ P +
Sbjct: 403 LCTSSMAGDASSHRPSCSQDLEAGLSEAVPGSASMSRSATAACRAQLSPAGDPDTWKT-- 460
Query: 455 AEKRRPVPTFQKVPLPSGPAPAHSLGDLKGSWPGRGLVTRFLQISRKA 502
+RP P + P S P SL D K R LV +FL+ S A
Sbjct: 461 --DQRPTP--EPFPATSKERP-RSLVDSKAYADARVLVAKFLEHSHCA 503
>gi|189027139 chromosome 9 open reading frame 61 [Homo sapiens]
Length = 450
Score = 58.2 bits (139), Expect = 2e-08
Identities = 51/209 (24%), Positives = 86/209 (41%), Gaps = 38/209 (18%)
Query: 77 LLFSVCGLTICAAIICTLSAIVCCIQIFSLDLVHTLAPERSVSGPLGPLGCTSPPPAPLL 136
+LF++C L +C ++A + +QIF+ + E +S P P
Sbjct: 86 VLFALCALNALTTTVCLVAAALRYLQIFATR--RSCIDESQISAEEAEDHGRIPDP---- 139
Query: 137 HTMLDLEEFVPPVPPPPYYPPEYTCSSETDAQSI---------TYNGSMDSPVPLYPTDC 187
++FVPPVPPP Y+ Y+C+ + + + Y + P D
Sbjct: 140 ------DDFVPPVPPPSYFATFYSCTPRMNRRMVGPDVIPLPHIYGARIKGVEVFCPLDP 193
Query: 188 PPSYEAVMGLRGDSQATLFDPQLHDGSCICERVASIVDVSMDSGSLVLSAIGDLPGGSSP 247
PP YEAV+ Q + F Q+ +GS + +D G ++ GD+P + P
Sbjct: 194 PPPYEAVVSQMDQEQGSSF--QMSEGS-------EAAVIPLDLGCTQVTQDGDIP--NIP 242
Query: 248 SEDSCLLELQGSVRSVDYVLFRSIQRSRA 276
+E++ S + L R I+ RA
Sbjct: 243 AEEN------ASTSTPSSTLVRPIRSRRA 265
Score = 30.8 bits (68), Expect = 3.5
Identities = 22/46 (47%), Positives = 26/46 (56%), Gaps = 4/46 (8%)
Query: 529 LHLRSCGDLSSSSSLRRLLSGRRLER--GTRPHSLSLNGGSRETGL 572
LHL+SCGDL + + R + RR R RPHSL G RET L
Sbjct: 407 LHLQSCGDLHTFTPAGRPRAERRPRRVEAERPHSLI--GVIRETVL 450
>gi|189027135 chromosome 9 open reading frame 61 [Homo sapiens]
Length = 450
Score = 58.2 bits (139), Expect = 2e-08
Identities = 51/209 (24%), Positives = 86/209 (41%), Gaps = 38/209 (18%)
Query: 77 LLFSVCGLTICAAIICTLSAIVCCIQIFSLDLVHTLAPERSVSGPLGPLGCTSPPPAPLL 136
+LF++C L +C ++A + +QIF+ + E +S P P
Sbjct: 86 VLFALCALNALTTTVCLVAAALRYLQIFATR--RSCIDESQISAEEAEDHGRIPDP---- 139
Query: 137 HTMLDLEEFVPPVPPPPYYPPEYTCSSETDAQSI---------TYNGSMDSPVPLYPTDC 187
++FVPPVPPP Y+ Y+C+ + + + Y + P D
Sbjct: 140 ------DDFVPPVPPPSYFATFYSCTPRMNRRMVGPDVIPLPHIYGARIKGVEVFCPLDP 193
Query: 188 PPSYEAVMGLRGDSQATLFDPQLHDGSCICERVASIVDVSMDSGSLVLSAIGDLPGGSSP 247
PP YEAV+ Q + F Q+ +GS + +D G ++ GD+P + P
Sbjct: 194 PPPYEAVVSQMDQEQGSSF--QMSEGS-------EAAVIPLDLGCTQVTQDGDIP--NIP 242
Query: 248 SEDSCLLELQGSVRSVDYVLFRSIQRSRA 276
+E++ S + L R I+ RA
Sbjct: 243 AEEN------ASTSTPSSTLVRPIRSRRA 265
Score = 30.8 bits (68), Expect = 3.5
Identities = 22/46 (47%), Positives = 26/46 (56%), Gaps = 4/46 (8%)
Query: 529 LHLRSCGDLSSSSSLRRLLSGRRLER--GTRPHSLSLNGGSRETGL 572
LHL+SCGDL + + R + RR R RPHSL G RET L
Sbjct: 407 LHLQSCGDLHTFTPAGRPRAERRPRRVEAERPHSLI--GVIRETVL 450
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 44.7 bits (104), Expect = 2e-04
Identities = 79/307 (25%), Positives = 98/307 (31%), Gaps = 41/307 (13%)
Query: 111 TLAPERSVSGPLGPLGCTSPPPAPLLHTMLDLEEFVPPVPPPPYYPPEYTCSSETDAQSI 170
TL P ++ PL PL SP P L T+ PP PP PP T S+
Sbjct: 330 TLPPSPPLATPL-PLAPPSPSAPPSLQTLPS-----PPATPPSQAPPSMTTPPMQAPPSL 383
Query: 171 TYNGSMDSPVPLY--PTDCPPSYEAVMGLRGDSQATLFDPQLHDGSCICERVASIVDVSM 228
+ P L PPS A+ L+ + +L P L S+
Sbjct: 384 QTIPPIQVPHSLTSPSLQAPPSPLALSSLQ--ATTSLGSPTLQATHSFLTMSPRQTQASL 441
Query: 229 DSGSLVLSAIGDLPGGSSPSEDSCLLELQGSVRSVDYVLFRSIQ-------RSRAGYC-- 279
S S S D P +P LQ S+ L + S A +
Sbjct: 442 TSPSRPASTPPDSPPLQAPLSLPASPPLQTSLSPAVSPLSSPLTIHPLQALSSLASHSPQ 501
Query: 280 LSLDCGLRGPFEESPLPRRPPRAARSYSCSAPE-------APPPLGAPTAARSCHRLEGW 332
L + P E P S + P APPPL +A + LE
Sbjct: 502 APLSSLIMPPLETQSSLAPPSLQTPPASLTTPPLENLPSLAPPPLQTASAPLTTPHLE-T 560
Query: 333 PPWVGPCFPELRRRVPRGGGRPAAAPPTRAPTRRFSDSSGSLTPPGHRPPHPASPPPLLL 392
PP PC P APP+ T S TPP PP ASPP L
Sbjct: 561 PPCPAPC--------------PLQAPPSPLTTPPPETPSSIATPPPQAPPALASPPLQGL 606
Query: 393 PRSHSDP 399
P P
Sbjct: 607 PSPPLSP 613
Score = 40.4 bits (93), Expect = 0.004
Identities = 34/107 (31%), Positives = 41/107 (38%), Gaps = 31/107 (28%)
Query: 284 CGLRGPFEESPLPRRPPRAARSYSCSAPEAPPPLGAPTAARSCHRLEGWPPWVGPCFPEL 343
C L+ P SPL PP S + P+APP L +P L+G P P L
Sbjct: 567 CPLQAP--PSPLTTPPPETPSSIATPPPQAPPALASPP-------LQGLPS------PPL 611
Query: 344 RRRVPRGGGRPAAAPPTRAPTRRFSDSSGSLTPPGHRPPHPASPPPL 390
P A PP +AP PP PP P + PPL
Sbjct: 612 ---------SPLATPPPQAP-------PXLALPPLQAPPSPPASPPL 642
Score = 39.7 bits (91), Expect = 0.008
Identities = 44/142 (30%), Positives = 52/142 (36%), Gaps = 32/142 (22%)
Query: 286 LRGPFEESPLPRRPPRAARSYSCSAPEAP---PPLGAPTAARSCHRLEGWPPWVGPCFPE 342
L+ PF SP P P +A S S P +P PP AP + L P V P P
Sbjct: 661 LQAPF--SPPPSPPVQAPFSPPASPPVSPSATPPSQAPPS------LAAPPLQVPPSPPA 712
Query: 343 LRRRVPRGGGRPAAAPPTRAPTRRFSDS-------SGSLTPPGHRPPHPASPP------- 388
P P A PP AP + S S S TPP PP A+PP
Sbjct: 713 SPPMSPSATPPPQAPPPLAAPPLQVPPSPPASPPMSPSATPPPRVPPLLAAPPLQVPPSP 772
Query: 389 -------PLLLPRSHSDPGITT 403
PL P + P + T
Sbjct: 773 PASLPMSPLAKPPPQAPPALAT 794
Score = 38.5 bits (88), Expect = 0.017
Identities = 40/140 (28%), Positives = 55/140 (39%), Gaps = 27/140 (19%)
Query: 293 SPLPRRPPRAARSYSCSAPEAPP---------PLGAPTA----ARSCHRLEG------WP 333
SPL PP+A + +APP PL P+ A + H L+ P
Sbjct: 612 SPLATPPPQAPPXLALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSP 671
Query: 334 PWVGPCFPELRRRVPRGGGRPAAAPPT-RAPTRRFSDS-------SGSLTPPGHRPPHPA 385
P P P V P+ APP+ AP + S S S TPP PP A
Sbjct: 672 PVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLA 731
Query: 386 SPPPLLLPRSHSDPGITTSS 405
+PP + P + P ++ S+
Sbjct: 732 APPLQVPPSPPASPPMSPSA 751
Score = 33.1 bits (74), Expect = 0.71
Identities = 33/125 (26%), Positives = 41/125 (32%), Gaps = 32/125 (25%)
Query: 288 GPFEESPLPRRPPRAARSYSCSAPEAPPPLGAPTAARSCHRLEGWPPWVGPCFPELRRRV 347
GP SPL P + A PPP A T + L PP P
Sbjct: 297 GPLSSSPLATPSPSGTK-----ARPVPPPDNAATPLPAT--LPPSPPLATPL-------- 341
Query: 348 PRGGGRPAAAPPTRAPTRRFSDSSGSLTPPGHRPPHPASP-----------PPLLLPRSH 396
P A P AP + S TPP PP +P PP+ +P S
Sbjct: 342 ------PLAPPSPSAPPSLQTLPSPPATPPSQAPPSMTTPPMQAPPSLQTIPPIQVPHSL 395
Query: 397 SDPGI 401
+ P +
Sbjct: 396 TSPSL 400
Score = 31.6 bits (70), Expect = 2.1
Identities = 34/118 (28%), Positives = 40/118 (33%), Gaps = 12/118 (10%)
Query: 289 PFEESPLPRRPPRAARSYSCSAPEAPPPLGAPTAARSCHRLEGWPPWVGPCFPELRRRVP 348
P +P + PP S S PPP P A + PP FP P
Sbjct: 759 PLLAAPPLQVPPSPPASLPMSPLAKPPPQAPPALATPPLQALPSPP---ASFPGQAPFSP 815
Query: 349 RGG--GRPAAAPPTRAPTRRFSDSSGSLTPPGHRPPHPASPPPLLLPRSHSDPGITTS 404
P A PP +AP + P PP P + P L PR PG TS
Sbjct: 816 SASLPMSPLATPPPQAPPVLAA-------PLLQVPPSPPASPTLQAPRRPPTPGPDTS 866
Score = 30.4 bits (67), Expect = 4.6
Identities = 26/82 (31%), Positives = 30/82 (36%), Gaps = 6/82 (7%)
Query: 114 PERSVSGPLGPLGCTSPPPAPLLHTMLDLEEFVPPVPPP---PYYPPEYTCSSETDAQSI 170
P S PL PL SP L L F PP PP P+ PP S +
Sbjct: 634 PSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPS 693
Query: 171 TYNGSMDSP---VPLYPTDCPP 189
S+ +P VP P PP
Sbjct: 694 QAPPSLAAPPLQVPPSPPASPP 715
>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
Length = 538
Score = 44.7 bits (104), Expect = 2e-04
Identities = 33/106 (31%), Positives = 40/106 (37%), Gaps = 14/106 (13%)
Query: 289 PFEESPLPRRPPRAARSY-SCSAPEAPPPLGAPTAARSCHRLEGWPPWVGPCFPELRRRV 347
P P PPRA R + +A APPP AP PP P R
Sbjct: 101 PPRRGATPPAPPRAPRGAPAAAAAAAPPPTPAP------------PPPPAPVAAAAPARA 148
Query: 348 PRGGGRPAAAPPTRAPTRRFSDSSGSLTPPGHRPPHPASPPPLLLP 393
PR A APP+ P + + P PP PA+PP + P
Sbjct: 149 PRAAAAAATAPPSPGPAQP-GPRAQRAAPLAAPPPAPAAPPAVAPP 193
Score = 43.5 bits (101), Expect = 5e-04
Identities = 40/113 (35%), Positives = 47/113 (41%), Gaps = 18/113 (15%)
Query: 294 PLPRRPPRAARSYSCSAPE----APPPLGAPTAA-------RSCHRLEGWPPWVGPCFPE 342
P P R PR A + + +A APPP AP AA R+ PP GP P
Sbjct: 109 PAPPRAPRGAPAAAAAAAPPPTPAPPPPPAPVAAAAPARAPRAAAAAATAPPSPGPAQPG 168
Query: 343 LR--RRVPRGGGRPA-AAPPTRAPT----RRFSDSSGSLTPPGHRPPHPASPP 388
R R P PA AAPP AP R + + PP PP P +PP
Sbjct: 169 PRAQRAAPLAAPPPAPAAPPAVAPPAGPRRAPPPAVAAREPPLPPPPQPPAPP 221
>gi|112734870 hypothetical protein LOC57648 [Homo sapiens]
Length = 1094
Score = 44.3 bits (103), Expect = 3e-04
Identities = 67/242 (27%), Positives = 91/242 (37%), Gaps = 37/242 (15%)
Query: 242 PGGSSPSEDSCLLELQGSVR-SVDYVLFRSIQRS----RAGYCLSLDCGLRGPFEESPLP 296
P G S +E S L ++ S + S V R ++R R + L GL P LP
Sbjct: 464 PSGGSTAEASDTLSIRSSGQLSGRSVSLRKLKRPPPPPRRTHSLH-QRGLAVPDGPLGLP 522
Query: 297 RRPPRAARSYSCSAPEAPPPLGAPTAARSCHRLEGWPPWVGPCFPELRRRVPRGGGRPAA 356
+P R + P GA A + W P + P G RP
Sbjct: 523 PKPERKQQPQLPRPPTTGGSEGAGAAPCPPNPANSWVPGLSP----------GGSRRPPR 572
Query: 357 APP-TRAPTRRFSDSSGSLT-PPGHRPPHPASPPPLLLPRSHSDPGITTSSDTADFRDLY 414
+P T +P+ +S SG+ T PP PASP P+ P TS
Sbjct: 573 SPERTLSPSSGYSSQSGTPTLPPKGLAGPPASPGKAQPPK----PERVTS---------- 618
Query: 415 TKVLEEEAASVSSADTGLCSEACLFRLARCPSPKLLRARSAEKRRPVPTFQKVPLPSGPA 474
L ASVSS+ T LCS + + P++L R +P KVP P P
Sbjct: 619 ---LRSPGASVSSSLTSLCSSSSDPAPSDRSGPQILTPLG--DRFVIPPHPKVPAPFSPP 673
Query: 475 PA 476
P+
Sbjct: 674 PS 675
Score = 30.8 bits (68), Expect = 3.5
Identities = 25/92 (27%), Positives = 39/92 (42%), Gaps = 11/92 (11%)
Query: 112 LAPERSVSGPLGPLGCTSPPPAPLLHTMLDLEEFV--------PPVPPPPYY-PPEYTCS 162
LA V GP+ + P T+ L+E PP PPP Y+ PP T
Sbjct: 687 LAAPAVVPGPVSTTDASPQSPPTPQTTLTPLQESPVISKDQSPPPSPPPSYHPPPPPTKK 746
Query: 163 SETDAQSITYNGSMDSPV--PLYPTDCPPSYE 192
E ++ + + + + P+ P +P PP+ E
Sbjct: 747 PEVVVEAPSASETAEEPLQDPNWPPPPPPAPE 778
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 44.3 bits (103), Expect = 3e-04
Identities = 52/184 (28%), Positives = 67/184 (36%), Gaps = 24/184 (13%)
Query: 289 PFEESPLPRRPPRAARSYSCSAPEAPPPLGAPTAARSCHRLEGWPPWVGPCFPELRRRVP 348
P ++P PR PR +RS S S P P G+ + S PP + R
Sbjct: 1622 PEPKAPAPRALPRRSRSGSSSKGRGPSPEGSSSTESSPEH----PP---------KSRTA 1668
Query: 349 RGGGRPAAAPPTRA---PTRRFSDSSGSLTPPGHRPPHPASPPPLLLPRSHSDPGITTSS 405
R G R + P T++ P RR S SS LT S RS + P S
Sbjct: 1669 RRGSRSSPEPKTKSRTPPRRRSSRSSPELTRKARLSRRSRSASSSPETRSRTPPRHRRSP 1728
Query: 406 DTADFRDLYTKVLEEEAASVSSADTGLCSEACLFRLARCPSPK---LLRARSAEKRRPVP 462
+ S SS T S R R PSPK L R+RS +R
Sbjct: 1729 SVSSPEPAEKSRSSRRRRSASSPRTKTTS-----RRGRSPSPKPRGLQRSRSRSRREKTR 1783
Query: 463 TFQK 466
T ++
Sbjct: 1784 TTRR 1787
Score = 33.9 bits (76), Expect = 0.41
Identities = 50/188 (26%), Positives = 65/188 (34%), Gaps = 65/188 (34%)
Query: 270 SIQRSRAGYCLSLDCGLRGPFEESPLPRR----PPRAARSYSC--------------SAP 311
S RS+A LSL L G SP P++ PPR +RS S S+
Sbjct: 763 SSPRSKAKSRLSLRRSLSG---SSPCPKQKSQTPPRRSRSGSSQPKAKSRTPPRRSRSSS 819
Query: 312 EAPPPLGAPTAARSCHRLE--------GWPPWVGP-----------------CF-----P 341
PP + T +R H G PP G CF P
Sbjct: 820 SPPPKQKSKTPSRQSHSSSSPHPKVKSGTPPRQGSITSPQANEQSVTPQRRSCFESSPDP 879
Query: 342 ELRRRVPRGGGRPAAAPPTRAPTRRFSDSSGSLTPPGHRPPHPASPPP----LLLPRSHS 397
EL+ R P ++PP S TPP P +SP P ++ PR S
Sbjct: 880 ELKSRTPSRHSCSGSSPPRVK----------SSTPPRQSPSRSSSPQPKVKAIISPRQRS 929
Query: 398 DPGITTSS 405
G ++ S
Sbjct: 930 HSGSSSPS 937
Score = 30.4 bits (67), Expect = 4.6
Identities = 44/175 (25%), Positives = 60/175 (34%), Gaps = 31/175 (17%)
Query: 298 RPPRAARSYSCSAPEAPPPLGAPTAARSCHRLEGWPPWVGPCFPELRRRVPRGGGRPAAA 357
R P A + S + PP ++ + VGP V G R AAA
Sbjct: 2301 RTPAALAALSLTGSGTPPTAANYPSSSRTPQAPASANLVGPRSAHATAPVNIAGSRTAAA 2360
Query: 358 -PPTRAPTRRFSD--SSGSLTPPG------HRPPHPASPPPLLLPRSHSDPGITTSSDTA 408
P + R + S +LT P R SPP L RS + P + S
Sbjct: 2361 LAPASLTSARMAPALSGANLTSPRVPLSAYERVSGRTSPPLLDRARSRTPPSAPSQS--- 2417
Query: 409 DFRDLYTKVLEEEAASVSSADTGLCSEACLFRLARCPSPKLLRARSAEKRRPVPT 463
++ E A S SS R+ + PS LL + R PVP+
Sbjct: 2418 -------RMTSERAPSPSS------------RMGQAPSQSLLPPAQDQPRSPVPS 2453
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 44.3 bits (103), Expect = 3e-04
Identities = 101/403 (25%), Positives = 137/403 (33%), Gaps = 52/403 (12%)
Query: 112 LAPERSVSGPLGPLGCTSPPP--APLLHTMLDLEEFVPPVPPPPYYPPEYTCSSETDAQS 169
L P S + P+ P SP APL +L E +P P P PP T
Sbjct: 700 LVPTASENCPVAP----SPQNTCAPLATLVLAPE--IPKSVPSPSLPPAGTPPGTKKVDG 753
Query: 170 ITYNGSMDSPVPLYPTDCPPSYEAVMGLRGDSQATLF---DPQLHDGSCICERVASIVDV 226
I++ ++ +PV P +CP ++ S+ TL D G + +
Sbjct: 754 ISHTSAL-APVASSPKECPTE-DSGASATASSKGTLTYLADSPSPLGVSVSPQTKRPPTK 811
Query: 227 SMDSGSLVLSAIGDLPGGSSPSEDSCL----LELQGSVRSVDYVLFRSIQRSRAGYCLSL 282
+G + IG+L SP E S L L QGS S + + S
Sbjct: 812 KGSAGPD--TPIGNLSSPVSPVEASFLPENSLSFQGSKDSPATTHSPTPPSPKGAPTPSA 869
Query: 283 DC-----GLRGPFEESPLPR--RPPRAARSYSCSAPEAPPPLG----APTAARSCHRLEG 331
G+ P +E+P P P + AP+ P L +P AR+ +G
Sbjct: 870 VTPLSPKGVTLPPKETPTPSVVNLPFPKEGPATPAPKQAPALSMTSSSPKKARATPAPKG 929
Query: 332 WP----PWVGPCFPELRRRVPRGGGR----------PAAAPPTRAPTRRFSDSSGSLTPP 377
P P P P P+GG PAA PP+ G+ TPP
Sbjct: 930 IPASPSPKGAPTPPAATPPSPKGGPATPSPKWAPTPPAATPPSPKGGPATPSPKGAPTPP 989
Query: 378 GHRPPHPASPPPLLLPRSHSDPGITT--SSDTADFRDLYTKVLEEEAASV------SSAD 429
PP P P P+ P T S + + K A+ S A
Sbjct: 990 AATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPAATPFPKGASTPPAATPPSPKGSPAA 1049
Query: 430 TGLCSEACLFRLARCPSPKLLRARSAEKRRPVPTFQKVPLPSG 472
T L A A PSPK A + K P P P P G
Sbjct: 1050 TPLPKGAPTTPAATLPSPKGGPATPSLKGAPTPPAATPPSPKG 1092
Score = 43.9 bits (102), Expect = 4e-04
Identities = 36/101 (35%), Positives = 43/101 (42%), Gaps = 7/101 (6%)
Query: 300 PRAARSYSCSAPEAPPPLGAPTA-ARSCHRLEGW---PPWVGPCFPEL-RRRVPRGGGRP 354
P A P PPP GAPT A + L+G PP G P + P+GG P
Sbjct: 1244 PAATPPSPKGGPATPPPKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGG--P 1301
Query: 355 AAAPPTRAPTRRFSDSSGSLTPPGHRPPHPASPPPLLLPRS 395
A +PP APT + PG PP A PP + P S
Sbjct: 1302 ATSPPKGAPTPPAATPPSPKGSPGTPPPKGAPTPPAVTPPS 1342
Score = 38.1 bits (87), Expect = 0.022
Identities = 51/212 (24%), Positives = 67/212 (31%), Gaps = 28/212 (13%)
Query: 289 PFEESPLPRRPPRAARSYSCSAPEAP-------PPLGAPTAARSCHR-----LEGWPPWV 336
P + L PP+ A + + P +P PP GAPT + L P
Sbjct: 1134 PSPKGGLATPPPKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPSPKG 1193
Query: 337 GPCFPELRRRVPRGG----------GRPAAAPPTRAPTRRFSDSSGSLTPPGHRPPH--- 383
P P P+GG PAA PP+ G+ T P PP
Sbjct: 1194 APTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKG 1253
Query: 384 -PASPPP--LLLPRSHSDPGITTSSDTADFRDLYTKVLEEEAASVSSADTGLCSEACLFR 440
PA+PPP P + + P + T + + + T A
Sbjct: 1254 GPATPPPKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPATSPPKGAPTPP 1313
Query: 441 LARCPSPKLLRARSAEKRRPVPTFQKVPLPSG 472
A PSPK K P P P P G
Sbjct: 1314 AATPPSPKGSPGTPPPKGAPTPPAVTPPSPKG 1345
Score = 38.1 bits (87), Expect = 0.022
Identities = 40/139 (28%), Positives = 49/139 (35%), Gaps = 26/139 (18%)
Query: 299 PPRAARSYSCSAPEAPPPLGAPTAARSCHRLEGWPPWVGPCFPELRRRVPRGGGRPAAAP 358
PP A +P PPP GAPT PP V P P+ +P A P
Sbjct: 1312 PPAATPPSPKGSPGTPPPKGAPT-----------PPAVTPPSPKGTPTLP------ATTP 1354
Query: 359 PTRAPTRRFSDSSGSLTPPGHRPPH---PASPPPL-----LLPRSHSDPGITTSSDTADF 410
++ S G TPP P H PA PP +P DP +
Sbjct: 1355 SSKGGPTTPSSKEGP-TPPAATPSHKGGPAMTPPSPKRGPAIPSPKGDPTSPAVIPLSPK 1413
Query: 411 RDLYTKVLEEEAASVSSAD 429
+ T V E AA+ S D
Sbjct: 1414 KAPATPVTREGAATPSKGD 1432
Score = 35.4 bits (80), Expect = 0.14
Identities = 52/196 (26%), Positives = 62/196 (31%), Gaps = 44/196 (22%)
Query: 289 PFEESPLPRRPPR----AARSYSCSAPEAPPPLGAPTAARSCHRLEGWPPWVGPCFPELR 344
P P P+ PP A S AP P P+GAPT P V P P
Sbjct: 1468 PAVTPPSPKEPPAPKQVATSSSPKKAPATPAPMGAPTL-----------PAVIPSSP--- 1513
Query: 345 RRVPRGGGRPAAAPPTRAPTRRFSDSSGSLTPPGHRPPHPASPPPLLLPRSHSDPGITTS 404
+ VP P++ APT TP P PP + +P P I T
Sbjct: 1514 KEVP---ATPSSRRDPIAPTATLLSKK---TPATLAPKEALIPPAMTVPSPKKTPAIPTP 1567
Query: 405 SDTADFRDLYTKVLEEEAASVSSADTGLCSEACLFRLARCPSPKLLRARSA-----EKRR 459
+E A+ SS + PSPK L A K
Sbjct: 1568 --------------KEAPATPSSKEASSPPAVTPSTYKGAPSPKELLIPPAVTSPSPKEA 1613
Query: 460 PVPTFQKVPLP-SGPA 474
P P P P GPA
Sbjct: 1614 PTPPAVTPPSPEKGPA 1629
Score = 34.7 bits (78), Expect = 0.24
Identities = 55/199 (27%), Positives = 68/199 (34%), Gaps = 24/199 (12%)
Query: 287 RGPFEESPLPR---RPPRAARSYSCSAPEAPP-PLGAPTAARSCHRLEGWPPWVGPCFPE 342
+G +P P+ PP A +P A P P GAPT + P GP P
Sbjct: 1020 KGSPAATPFPKGASTPPAATPPSPKGSPAATPLPKGAPTTPAATLP----SPKGGPATPS 1075
Query: 343 LRRRVPRGGGRPAAAPPTRAPTRRFSDSSGSLTPPGHRPPHP----ASPPPLLLPRSHSD 398
L+ PAA PP+ G+ PP PP P A+PP P +
Sbjct: 1076 LKGAPTP----PAATPPSPKGGPATPSPKGAPMPPAATPPSPKGGLATPPHKGAP---TT 1128
Query: 399 PGITTSSDTADFRDLYTK-VLEEEAASVSSADTGLCSE----ACLFRLARCPSPKLLRAR 453
P T S K AA+ S GL + A A PSPK A
Sbjct: 1129 PAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLAT 1188
Query: 454 SAEKRRPVPTFQKVPLPSG 472
+ K P P P G
Sbjct: 1189 PSPKGAPTTPAATPPSPKG 1207
Score = 34.3 bits (77), Expect = 0.32
Identities = 41/145 (28%), Positives = 46/145 (31%), Gaps = 40/145 (27%)
Query: 288 GPFEESPLPR-RPPRAARSYSCSAPEAPPPLGAPTAARSCHRLEGWPPWVGPCFPE---L 343
GP SP PP A P P P GAPT PP V P P+
Sbjct: 976 GPATPSPKGAPTPPAATPPSPKGGPATPSPKGAPT-----------PPAVTPPSPKGSPA 1024
Query: 344 RRRVPRGG------------GRPAAAP-PTRAPTRRFS------------DSSGSLTPPG 378
P+G G PAA P P APT + G+ TPP
Sbjct: 1025 ATPFPKGASTPPAATPPSPKGSPAATPLPKGAPTTPAATLPSPKGGPATPSLKGAPTPPA 1084
Query: 379 HRPPHPASPPPLLLPRSHSDPGITT 403
PP P P P+ P T
Sbjct: 1085 ATPPSPKGGPATPSPKGAPMPPAAT 1109
Score = 32.3 bits (72), Expect = 1.2
Identities = 52/217 (23%), Positives = 74/217 (34%), Gaps = 21/217 (9%)
Query: 294 PLPRRPPRAARSYSCSAPEAPPPLGAPTAARSCHRLEGWPPWVGPCFPELRRRVPRGGGR 353
P + P APE+ P + APT R + + P P+ + G
Sbjct: 1673 PAKKGPTALKEVLVAPAPESTPIITAPT--RKGPQTKKSSATSPPICPDPSAKNGSKGPL 1730
Query: 354 PAAAPPTRAPTRRFSDSSGSLTPPGHRPPHPASPPPLLLPRSHSDPGITTSSDTADFRDL 413
AP P ++ S + H P P +P P S + +T ++
Sbjct: 1731 STVAPAPLLPVQKDSSKTAKGKDASHSPKGPLAP-----PESKASTPLTAAA-------- 1777
Query: 414 YTKVL-EEEAASVSSADTGLCSEACLFRLARCPSPKLLRARSAEKRRPVPTFQKVPLPSG 472
+ KVL + E+ASVS+A S LA P P L + P + P
Sbjct: 1778 FEKVLPKPESASVSAAP----SPPVSLPLAPSPVPTLPPKQQFLPSSPGLVLESPSKPLA 1833
Query: 473 PAPAHSLGDLKGSWPGRGLVTRFLQISRKAPDPSGTG 509
PA L L P G V F + P P G
Sbjct: 1834 PADEDELLPLIPPEPISGGVP-FQSVLVNMPTPKSAG 1869
>gi|209180481 Cas-Br-M (murine) ecotropic retroviral transforming
sequence-like 1 [Homo sapiens]
Length = 491
Score = 43.1 bits (100), Expect = 7e-04
Identities = 40/129 (31%), Positives = 55/129 (42%), Gaps = 29/129 (22%)
Query: 294 PLPRRPPRAARS----YSCSAP----EAPPPLGAPTAARSCHRLEGWPPWVGPCFPELRR 345
P+P PP+AA + YS + P APPP+ P H + PP++ P
Sbjct: 354 PMPH-PPQAAGTPHLVYSQAPPPPMTSAPPPITPPPG----HIIAQMPPYMN--HPPPGP 406
Query: 346 RVPRGGGRPAAAPPTR----APTRRFSDSSGSLTPPGHRP--------PHPASPPPLLLP 393
P+ GG P APP +F++ G+L+PP +P P P PPP P
Sbjct: 407 PPPQHGGPPVTAPPPHHYNPNSLPQFTEDQGTLSPPFTQPGGMSPGIWPAPRGPPP--PP 464
Query: 394 RSHSDPGIT 402
R P T
Sbjct: 465 RLQGPPSQT 473
Score = 30.4 bits (67), Expect = 4.6
Identities = 26/108 (24%), Positives = 34/108 (31%), Gaps = 4/108 (3%)
Query: 299 PPRAARSYSCSAPEAPPPLGAPTAARSCHRLEGWPPWVGPCFPELRRRVPRGGGRPAAAP 358
PP A ++ + P + P + PP P P+ G P
Sbjct: 310 PPAPAPAHHHPEYQGQPVVSHPHHIMPPQQHYAPPPPPPPPISHPMPHPPQAAGTPHLVY 369
Query: 359 PTRAPTRRFSDSSGSLTPPGH----RPPHPASPPPLLLPRSHSDPGIT 402
P S PPGH PP+ PPP P H P +T
Sbjct: 370 SQAPPPPMTSAPPPITPPPGHIIAQMPPYMNHPPPGPPPPQHGGPPVT 417
Score = 30.0 bits (66), Expect = 6.0
Identities = 26/99 (26%), Positives = 38/99 (38%), Gaps = 20/99 (20%)
Query: 108 LVHTLAPERSVSGPLGPLGCTSPPPAPLLHTMLDLEEFVPPVPPPP-------------- 153
LV++ AP ++ P+ +PPP ++ M PP PPPP
Sbjct: 367 LVYSQAPPPPMTSAPPPI---TPPPGHIIAQMPPYMNHPPPGPPPPQHGGPPVTAPPPHH 423
Query: 154 YYP---PEYTCSSETDAQSITYNGSMDSPVPLYPTDCPP 189
Y P P++T T + T G M + P PP
Sbjct: 424 YNPNSLPQFTEDQGTLSPPFTQPGGMSPGIWPAPRGPPP 462
>gi|56549666 tyrosine kinase, non-receptor, 2 isoform 1 [Homo
sapiens]
Length = 1038
Score = 42.7 bits (99), Expect = 9e-04
Identities = 84/335 (25%), Positives = 113/335 (33%), Gaps = 81/335 (24%)
Query: 179 PVPLYPTDC----------PPSYEAVMGLRGDSQATLFDPQLHDGSCICERVASIVDVSM 228
P PL+PT PP+Y+ V D + + L V + V
Sbjct: 613 PRPLHPTPVVDWDARPLPPPPAYDDVAQDEDDFEICSINSTL---------VGAGVPAGP 663
Query: 229 DSGSLVLSAIGDLPGGSSPSEDSCLLELQGSVRSVDYVLFRSIQRSRAGYCLSLDC--GL 286
G + + + P ED+ L QG + S Q + L +C L
Sbjct: 664 SQGQTNYAFVPEQARPPPPLEDNLFLPPQGGGKPPS-----SAQTAEIFQALQQECMRQL 718
Query: 287 RGPFEESPLPRRPPRAARSYSCSAPEAPPPLGAPTAARSCH-RLEGWPP-------WVGP 338
+ P SP P P P+ PP + P H +L PP W GP
Sbjct: 719 QAP-AGSPAPSPSPGGD-----DKPQVPPRVPIPPRPTRPHVQLSPAPPGEEETSQWPGP 772
Query: 339 CFPELRRRVPRGGGRPAAAPPTRAPTRRFSDSSGSLTPPGHRPPHPASPP--PLLLPRSH 396
A P R P R L+P G R P P PP L PR
Sbjct: 773 ------------------ASPPRVPPRE------PLSPQGSRTPSPLVPPGSSPLPPRLS 808
Query: 397 SDPG---ITTSSDTADFRDLYTKVLEEEAASVSSA------DTGLCSEACLFRLARCPS- 446
S PG TT S +D + +V++ D S + L PS
Sbjct: 809 SSPGKTMPTTQSFASDPKYATPQVIQAPGPRAGPCILPIVRDGKKVSSTHYYLLPERPSY 868
Query: 447 ----PKLLR-ARSAEKRRPVPTFQKVPLPSGPAPA 476
+ LR A+S E+ P+P +P PS PAPA
Sbjct: 869 LERYQRFLREAQSPEEPTPLPVPLLLPPPSTPAPA 903
>gi|58331191 tyrosine kinase, non-receptor, 2 isoform 2 [Homo
sapiens]
Length = 1086
Score = 42.7 bits (99), Expect = 9e-04
Identities = 84/335 (25%), Positives = 113/335 (33%), Gaps = 81/335 (24%)
Query: 179 PVPLYPTDC----------PPSYEAVMGLRGDSQATLFDPQLHDGSCICERVASIVDVSM 228
P PL+PT PP+Y+ V D + + L V + V
Sbjct: 691 PRPLHPTPVVDWDARPLPPPPAYDDVAQDEDDFEICSINSTL---------VGAGVPAGP 741
Query: 229 DSGSLVLSAIGDLPGGSSPSEDSCLLELQGSVRSVDYVLFRSIQRSRAGYCLSLDC--GL 286
G + + + P ED+ L QG + S Q + L +C L
Sbjct: 742 SQGQTNYAFVPEQARPPPPLEDNLFLPPQGGGKPPS-----SAQTAEIFQALQQECMRQL 796
Query: 287 RGPFEESPLPRRPPRAARSYSCSAPEAPPPLGAPTAARSCH-RLEGWPP-------WVGP 338
+ P SP P P P+ PP + P H +L PP W GP
Sbjct: 797 QAP-AGSPAPSPSPGGD-----DKPQVPPRVPIPPRPTRPHVQLSPAPPGEEETSQWPGP 850
Query: 339 CFPELRRRVPRGGGRPAAAPPTRAPTRRFSDSSGSLTPPGHRPPHPASPP--PLLLPRSH 396
A P R P R L+P G R P P PP L PR
Sbjct: 851 ------------------ASPPRVPPRE------PLSPQGSRTPSPLVPPGSSPLPPRLS 886
Query: 397 SDPG---ITTSSDTADFRDLYTKVLEEEAASVSSA------DTGLCSEACLFRLARCPS- 446
S PG TT S +D + +V++ D S + L PS
Sbjct: 887 SSPGKTMPTTQSFASDPKYATPQVIQAPGPRAGPCILPIVRDGKKVSSTHYYLLPERPSY 946
Query: 447 ----PKLLR-ARSAEKRRPVPTFQKVPLPSGPAPA 476
+ LR A+S E+ P+P +P PS PAPA
Sbjct: 947 LERYQRFLREAQSPEEPTPLPVPLLLPPPSTPAPA 981
>gi|224451135 splicing factor, arginine/serine-rich 15 isoform 3
[Homo sapiens]
Length = 1125
Score = 42.7 bits (99), Expect = 9e-04
Identities = 62/230 (26%), Positives = 83/230 (36%), Gaps = 44/230 (19%)
Query: 293 SPLPRRPPRAARSYSCSAPEAPPPLGAPTAARSCHRLEGWPPWVG----PCF-PELRRRV 347
SP+P+ P AP PP P + PP VG P F P L +
Sbjct: 656 SPIPKPLPVPVPPIPVPAPITVPPPQVPPH-------QPGPPVVGALQPPAFTPPLG--I 706
Query: 348 PRGGGRPAAAPPTRAPTRRFSDSSGSLTPPGHRPPHPASP--PPLLLPRSHSDP------ 399
P G P PP P + PPG PP P P PP+ +P H+ P
Sbjct: 707 PPPGFGPGVPPPPPPPPFLRPGFNPMHLPPGFLPPGPPPPITPPVSIPPPHTPPISIPNL 766
Query: 400 --GITTSSDTADFRDLYTKVLEEEAAS----------VSSADTGLCSEACLFRLARCPSP 447
G ++++ D +Y + A + VS T + + L + PS
Sbjct: 767 VSGARGNAESGDSVKMYGSAVPPAAPTNLPTPPVTQPVSLLGTQGVAPGPVIGL-QAPST 825
Query: 448 KLLRAR------SAEKRRPVPTFQKVPL-PSGPAPAHSLGDLKGSWPGRG 490
LL AR P P Q+ PL P P P H + +G PG G
Sbjct: 826 GLLGARPGLIPLQRPPGMPPPHLQRFPLMPPRPMPPHMMH--RGPPPGPG 873
Score = 31.2 bits (69), Expect = 2.7
Identities = 24/79 (30%), Positives = 29/79 (36%), Gaps = 11/79 (13%)
Query: 123 GPLGCTSPPPAPLLHTMLDLEE----FVPPVPPPPYYPPEYTCSSETDAQSITY------ 172
GP PPP P L + F+PP PPPP PP T SI
Sbjct: 712 GPGVPPPPPPPPFLRPGFNPMHLPPGFLPPGPPPPITPPVSIPPPHTPPISIPNLVSGAR 771
Query: 173 -NGSMDSPVPLYPTDCPPS 190
N V +Y + PP+
Sbjct: 772 GNAESGDSVKMYGSAVPPA 790
>gi|112789555 ADAM metallopeptidase with thrombospondin type 1
motif, 19 preproprotein [Homo sapiens]
Length = 1207
Score = 41.6 bits (96), Expect = 0.002
Identities = 30/88 (34%), Positives = 35/88 (39%), Gaps = 15/88 (17%)
Query: 313 APPPLGAPTAARSCHRLEGWPPWVGPCFPELR-RRVPRGGGRPAAAPPTRAPTRRFSDSS 371
AP PL P RS RL PP G EL + +PRG AA P
Sbjct: 87 APVPLEEPVEGRSESRLRPPPPSEGEEDEELESQELPRGSSGAAALSPG----------- 135
Query: 372 GSLTPPGHRPPHPASPPPLLLPRSHSDP 399
P +PP P PPP P H++P
Sbjct: 136 ---APASWQPPPPPQPPPSPPPAQHAEP 160
>gi|89040432 PREDICTED: hypothetical protein [Homo sapiens]
Length = 212
Score = 41.2 bits (95), Expect = 0.003
Identities = 41/128 (32%), Positives = 52/128 (40%), Gaps = 23/128 (17%)
Query: 289 PFEESPLPRRPPRAARSYSCSAPEAPPPLGAP-------TAARSCH---RLEG------W 332
P ++P +RP R R +S AP + P+ AP + +R CH +L
Sbjct: 35 PLPQTPPTKRPERF-RLHSPRAPGSAQPISAPEGRGGAGSRSRYCHGDGKLAAAAAGTVG 93
Query: 333 PPWV--GPCFPELRR-RVPRGGG---RPAAAPPTRAPTRRFSDSSGSLTPPGHRPPHPAS 386
P W+ G C E R R P GG RP AA P + R S P P S
Sbjct: 94 PRWLPAGQCLSEAERPRRPEPGGARSRPVAASPAASSRARSRPESSPGAPGSSVPALLPS 153
Query: 387 PPPLLLPR 394
PPL PR
Sbjct: 154 LPPLAAPR 161
>gi|122937267 lemur tyrosine kinase 3 [Homo sapiens]
Length = 1489
Score = 41.2 bits (95), Expect = 0.003
Identities = 40/124 (32%), Positives = 48/124 (38%), Gaps = 11/124 (8%)
Query: 288 GPFEESPLPRRPPRAARSYSCSAPEAPPPLGAPTAARSCHRLEGWPPWVGPCFPELRRRV 347
GP PLP P +R +CS P G A H G P P + R
Sbjct: 689 GPSRRGPLPC--PLCSREGACSC--LPLERGDAVAGWGGHPALGCPH---PPEDDSSLRA 741
Query: 348 PRGG-GRPAAAPPTRAPTRRFSDSSGSLTP--PGHRPPHPASPPPLLLPRSHSDPGITTS 404
RG APP AP G+ P PG PP PA PPP PR+ +DP +
Sbjct: 742 ERGSLADLPMAPPASAPPEFLDPLMGAAAPQYPGRGPP-PAPPPPPPPPRAPADPAASPD 800
Query: 405 SDTA 408
+A
Sbjct: 801 PPSA 804
Score = 32.7 bits (73), Expect = 0.92
Identities = 37/127 (29%), Positives = 49/127 (38%), Gaps = 25/127 (19%)
Query: 358 PPTRAPTRRFSDSSGSLT------PPGHRPPHPASPP-----PLLLPRSHSDPGITTSSD 406
PP + P+ SD LT PP RPP P PP P P +HS P T S
Sbjct: 423 PPAQRPSA--SDLQLQLTYLLSERPP--RPPPPPPPPRDGPFPWPWPPAHSAPRPGTLSS 478
Query: 407 TADFRDLYTKVLEEEAASVSSADTGLCSEACLFRLARCPSPKLLRARSAEKRRPVPTFQK 466
D + ++ +V+ + GL E CL+ AR R A + P +Q
Sbjct: 479 PFPLLDGFPGADPDDVLTVTESSRGLNLE-CLWEKAR---------RGAGRGGGAPAWQP 528
Query: 467 VPLPSGP 473
P P
Sbjct: 529 ASAPPAP 535
Score = 30.8 bits (68), Expect = 3.5
Identities = 21/68 (30%), Positives = 27/68 (39%), Gaps = 17/68 (25%)
Query: 130 PPPAPLLHTMLDLEEFVPPVPPPPYYPPEYTCSSETDAQSITYNGSMDSPVPL-----YP 184
PPPAP PP PPPP P + S + + + + SP P Y
Sbjct: 778 PPPAP------------PPPPPPPRAPADPAASPDPPSAVASPGSGLSSPGPKPGDSGYE 825
Query: 185 TDCPPSYE 192
T+ P S E
Sbjct: 826 TETPFSPE 833
Score = 30.0 bits (66), Expect = 6.0
Identities = 36/126 (28%), Positives = 40/126 (31%), Gaps = 28/126 (22%)
Query: 289 PFEESPLPRRP-PRAARSYSCSAPEAPPPLGAPTAARSCHRLEGWPPWVGPCFPELRRRV 347
P E+ L R P P A S AP PLG P G P RR
Sbjct: 1075 PAPETSLERAPAPSAVVSSRNGGETAPGPLGPA-------------PKNGTLEPGTERRA 1121
Query: 348 PRGGGRPAAAPPTRAPTRRFSDSS-GSLTPPGHRP-------------PHPASPPPLLLP 393
P GG P A R + G+ T PG P P PPP L P
Sbjct: 1122 PETGGAPRAPGAGRLDLGSGGRAPVGTGTAPGGGPGSGVDAKAGWVDNTRPQPPPPPLPP 1181
Query: 394 RSHSDP 399
+ P
Sbjct: 1182 PPEAQP 1187
>gi|153792074 proline rich 12 [Homo sapiens]
Length = 2036
Score = 41.2 bits (95), Expect = 0.003
Identities = 69/266 (25%), Positives = 90/266 (33%), Gaps = 66/266 (24%)
Query: 137 HTMLDLEEFVPPVPPPPYYPPEYTCSSETDAQSITYNGSMDSPVPLYPTDCPPSYEAVMG 196
H L PP+ PP PP S+ G P P P P G
Sbjct: 1295 HPPLYQAGLTPPLSPPKSVPP-----------SVPARGLQPQP-PATPAVPHPPPSGAFG 1342
Query: 197 LRGDSQATLFDPQLHDGSCICERVASIVDVSMDSGSLVLSAIGDLPGGSSPSEDSCLLEL 256
L G +A + C+R+ + ++++ LP SS EDS
Sbjct: 1343 LGGALEAAESEGLGLGCPSPCKRLDEELKRNLET----------LPSFSSDEEDSVAKN- 1391
Query: 257 QGSVRSVDYVLFRSIQRSRAGYCLSLDCG-LRGPFEESPLPRRPPRAARSYSCSAPEAPP 315
R +Q S + +LD L GP +++ P PP A +A PP
Sbjct: 1392 ------------RDLQESISSAISALDDPPLAGP-KDTSTPDGPPLAP----AAAVPGPP 1434
Query: 316 PLGAPTAARSCHRLEGWPPWVGPCFPELRRRVPRGGGRPAAAPPTRAPTRRFSDSSGSLT 375
PL +A S G P P L P P PP P +
Sbjct: 1435 PLPGLPSANS----NGTPE------PPLLEEKP-----PPTPPPAPTPQPQ--------P 1471
Query: 376 PPGHRPPHPA--SPPPLLLPRSHSDP 399
PP PP PA SPPPL+ P S P
Sbjct: 1472 PPPPPPPQPALPSPPPLVAPTPSSPP 1497
Score = 30.0 bits (66), Expect = 6.0
Identities = 36/133 (27%), Positives = 44/133 (33%), Gaps = 14/133 (10%)
Query: 289 PFEESPLPRRPPRAARSYSCSAPEAPPPLGAPTAARSCHRLEGWPPWVGPCFPELRRRVP 348
P + P P PP+ A +PPPL APT + PP P P P
Sbjct: 1467 PQPQPPPPPPPPQPALP-------SPPPLVAPTPSSP-------PPPPLPPPPPPAMPSP 1512
Query: 349 RGGGRPAAAPPTRAPTRRFSDSSGSLTPPGHRPPHPASPPPLLLPRSHSDPGITTSSDTA 408
PAAAP P + S P RP H A +D S
Sbjct: 1513 PPPPPPAAAPLAAPPEEPAAPSPEDPELPDTRPLHLAKKQETAAVCGETDEEAGESGGEG 1572
Query: 409 DFRDLYTKVLEEE 421
FR+ V+ E
Sbjct: 1573 IFRERDEFVIRAE 1585
>gi|222136583 inositol polyphosphate phosphatase-like 1 [Homo sapiens]
Length = 1258
Score = 40.8 bits (94), Expect = 0.003
Identities = 63/237 (26%), Positives = 86/237 (36%), Gaps = 37/237 (15%)
Query: 270 SIQRSRAGYCLSLDCGLRGPFEESPLPRRPPRAARSYSCSA----PEAPPPLGAPTAARS 325
SI + AG RG E R+P S S PE PPP G P A
Sbjct: 890 SIDKDEAGAKSKAPSVSRGSQEPRSGSRKPAFTEASCPLSRLFEEPEKPPPTGRPPA--- 946
Query: 326 CHRLEGWPPWVGPCFPELRRRV-PRGGGRP--AAAPPTRAPTRRFSDSSGSL---TPPGH 379
PP P L R+ P G P AAPP P F++ + + P
Sbjct: 947 -------PPRAAPREEPLTPRLKPEGAPEPEGVAAPP---PKNSFNNPAYYVLEGVPHQL 996
Query: 380 RPPHPASPPPLLLPRSHSDPGITTSSDTADFRDLYTKVLEEEAASVSSADT--------G 431
PP P SP +P + + T + +V E ++ S T
Sbjct: 997 LPPEPPSPARAPVPSATKNKVAITVPAPQLGHHRHPRVGEGSSSDEESGGTLPPPDFPPP 1056
Query: 432 LCSEACLF---RLARCPSPKLLRARSAEKRRPVP--TFQKVPLPSGPAPAHS-LGDL 482
++ +F L P P + AE R P P + PLP GP+PA + LG++
Sbjct: 1057 PLPDSAIFLPPSLDPLPGPVVRGRGGAEARGPPPPKAHPRPPLPPGPSPASTFLGEV 1113
>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
sapiens]
Length = 5537
Score = 40.4 bits (93), Expect = 0.004
Identities = 82/323 (25%), Positives = 118/323 (36%), Gaps = 65/323 (20%)
Query: 114 PERSVSGPLGPLGCTSPPPAPLLHTMLDLEEFVPPVPPPPYYPPEYTCSSETDAQSITYN 173
PE S P C SP P H +LE+ PP+ P P PPE
Sbjct: 828 PEESHLSPQSEEPCLSPRPEES-HLSPELEK--PPLSPRPEKPPEEP------------- 871
Query: 174 GSMDSP--VPLYPTDCPPSYEAVMGLRGDSQATLFDPQLHDGSCICERVASIVDVSMDSG 231
G +P +PL+P PS ++G + L +P S + E + + S
Sbjct: 872 GQCPAPEELPLFPPPGEPSLSPLLG-----EPALSEPGEPPLSPLPEEL-PLSPSGEPSL 925
Query: 232 SLVLSAIGDLPGGSSPSEDSCLLELQGSVRSVDYVLFRSIQRSRAGYCLSLDCGLRGPFE 291
S L LP SP + + ++Y A + L P
Sbjct: 926 SPQLMPPDPLPPPLSPIITAAAPPALSPLGELEYPF-------GAKGDSDPESPLAAPIL 978
Query: 292 ESPLPRRPPRAARSYSCSAPEAPPPLGAPTAARSCHRLEGWPPWVGPCFPELRRRVPRGG 351
E+P+ PP A +C+ PE PP+ P + S VGP P L +
Sbjct: 979 ETPI-SPPPEA----NCTDPEPVPPMILPPSPGSP---------VGPASPILMEPL---- 1020
Query: 352 GRPAAAPPTRAPTRRFSDSSGSLTPPGHRPPHPASPP--PLLLPRSHSDPG-ITTSSDTA 408
PP +P + S P + PP SPP PL +P S G + SD A
Sbjct: 1021 ------PPQCSPLLQHS------LVPQNSPPSQCSPPALPLSVPSPLSPIGKVVGVSDEA 1068
Query: 409 DFRDLYT-KVLEEEAASVSSADT 430
+ ++ T KV E E ++ + T
Sbjct: 1069 ELHEMETEKVSEPECPALEPSAT 1091
Score = 38.9 bits (89), Expect = 0.013
Identities = 38/120 (31%), Positives = 46/120 (38%), Gaps = 29/120 (24%)
Query: 286 LRGPFEESP-------LPRRPPRAARSYSC---SAPEAPPPLGAPTAARSCHRLEGWPPW 335
L PFEESP LP PP A S +P +PPP +P + PP
Sbjct: 545 LSPPFEESPLSPPPEELPTSPPPEASRLSPPPEESPMSPPPEESPMS----------PP- 593
Query: 336 VGPCFPELRRRVPRGGGRPAAAPPTRAPTRRFSDSSGSLTPPGHRPPHPASPPPLLLPRS 395
PE R P P + PP +P ++S PP P SPPP P S
Sbjct: 594 -----PEASRLFPPFEESPLSPPPEESPLSPPPEASRLSPPP---EDSPMSPPPEESPMS 645
Score = 37.7 bits (86), Expect = 0.029
Identities = 37/124 (29%), Positives = 44/124 (35%), Gaps = 7/124 (5%)
Query: 276 AGYCLSLDCGLRGPFEESPLPRRPPRAARSYSCSAPEAPPPLGAPTAARSCHRLEGWPPW 335
AG S D L+ P P P P P A P P + LE P
Sbjct: 2133 AGLSTSADGFLKPPAGSVPGPDSPGELFLKLPPQVP-AQVPSQDPFGLAPAYPLEPRFPT 2191
Query: 336 VGPCFPELRRRVPRGGGRPAAAPPTRAPTRRFSDSSGSL--TPPGHRPPHPASPPPLLLP 393
P +P P G PA P A +R + G TPPG P++P P L P
Sbjct: 2192 APPTYPPY----PSPTGAPAQPPMLGASSRPGAGQPGEFHTTPPGTPRHQPSTPDPFLKP 2247
Query: 394 RSHS 397
R S
Sbjct: 2248 RCPS 2251
Score = 36.2 bits (82), Expect = 0.084
Identities = 66/235 (28%), Positives = 84/235 (35%), Gaps = 55/235 (23%)
Query: 314 PPPLG---APTAARSCHRLEGWPPWV--GPCFPELRRRVPRGGG---RPAAAPPTRA--- 362
PP LG +P++ LE P V P P + P+ G RP PP +A
Sbjct: 2301 PPNLGFVDSPSSGTHLGGLELKTPDVFKAPLTPRASQVEPQSPGLGLRPQEPPPAQALAP 2360
Query: 363 --PTRRFSDSSGSLTPPGHRPP---HPASPPP----LLLPRS-HSDPGITTSSDTADFRD 412
P+ GS T P +PP P PPP L PRS SDP
Sbjct: 2361 SPPSHPDIFRPGSYTDPYAQPPLTPRPQPPPPESCCALPPRSLPSDP------------- 2407
Query: 413 LYTKVLEEEAASVSSADTGLCSEACLFRLARCPSPKLLRARSAE----------KRRPVP 462
+++V S SS+ + L L A CPSP R +S + R P
Sbjct: 2408 -FSRV-PASPQSQSSSQSPLTPRP-LSAEAFCPSPVTPRFQSPDPYSRPPSRPQSRDPFA 2464
Query: 463 TFQKVPLPSGPAPAHSLGDLKGSWPGRGLVTRFLQISRKAPDPSGTGAHGHKQVP 517
K P P P A G L + G G A P+G H +VP
Sbjct: 2465 PLHKPPRPQPPEVAFKAGSLAHTSLGAG--------GFPAALPAGPAGELHAKVP 2511
Score = 34.7 bits (78), Expect = 0.24
Identities = 40/128 (31%), Positives = 46/128 (35%), Gaps = 27/128 (21%)
Query: 280 LSLDCGLRGPFEESPL-------PRRPPRAARSYSCSAPEAPPPLGAPTAARSCHRLEGW 332
L+ + L P EESPL P PP A S PE P P A LE
Sbjct: 434 LNEEMPLLPPPEESPLSPPPEESPTSPPPEASRLS-PPPEELPASPLPEALHLSRPLEES 492
Query: 333 PPWVGPCFPELRRRVPRGGGRPAAAPPTRAPTRRFSDSSGSLTPPGHRPPHPA-----SP 387
P P P + PP +P +S L+PP PP PA SP
Sbjct: 493 P------------LSPPPEESPLSPPPESSPFSPLEESP--LSPPEESPPSPALETPLSP 538
Query: 388 PPLLLPRS 395
PP P S
Sbjct: 539 PPEASPLS 546
Score = 34.7 bits (78), Expect = 0.24
Identities = 79/320 (24%), Positives = 104/320 (32%), Gaps = 72/320 (22%)
Query: 114 PERSVSGPLGPLGCTSPPPAPL--------LHTMLDLEEFVPPVPPPPYYPPEYTCSSET 165
PE S + P SPPP L LH LEE P+ PPP P
Sbjct: 453 PEESPTSPPPEASRLSPPPEELPASPLPEALHLSRPLEE--SPLSPPPEESP-----LSP 505
Query: 166 DAQSITYNGSMDSPVPLYPTDCPPSYEAVMGLRGDSQATLFDPQLHDGSCICERVASIVD 225
+S ++ +SP+ P + PPS L +A+ P +
Sbjct: 506 PPESSPFSPLEESPLSP-PEESPPSPALETPLSPPPEASPLSPPFEESP----------- 553
Query: 226 VSMDSGSLVLSAIGDLPGGSSPSEDSCLLELQGSVRSVDYVLFRSIQRSRAGYCLSLDCG 285
+S L S + S P E+S + S + + + SR
Sbjct: 554 LSPPPEELPTSPPPEASRLSPPPEESPM-----SPPPEESPMSPPPEASR---------- 598
Query: 286 LRGPFEESPL-------PRRPPRAARSYSC---SAPEAPPPLGAPTAAR-SCHRLEGWP- 333
L PFEESPL P PP A S +P +PPP +P + RL P
Sbjct: 599 LFPPFEESPLSPPPEESPLSPPPEASRLSPPPEDSPMSPPPEESPMSPPPEVSRLSPLPV 658
Query: 334 ----------------PWVGPCFP--ELRRRVPRGGGRPAAAPPTRAPTRRFSDSSGSLT 375
P P P E R P P + PP +P + S
Sbjct: 659 VSRLSPPPEESPLSPPPEESPTSPPPEASRLSPPPEDSPTSPPPEDSPASPPPEDSLMSL 718
Query: 376 PPGHRPPHPASPPPLLLPRS 395
P P P P L PRS
Sbjct: 719 PLEESPLLPLPEEPQLCPRS 738
Score = 31.2 bits (69), Expect = 2.7
Identities = 23/76 (30%), Positives = 27/76 (35%), Gaps = 10/76 (13%)
Query: 341 PELRRRVPRGGGRPAAAPPTRAPTRRF----------SDSSGSLTPPGHRPPHPASPPPL 390
P L R+P G + PP APT + + G L PP P P SP L
Sbjct: 2100 PALHLRIPPQPGALGSPPPAAAPTIFIGSPTTPAGLSTSADGFLKPPAGSVPGPDSPGEL 2159
Query: 391 LLPRSHSDPGITTSSD 406
L P S D
Sbjct: 2160 FLKLPPQVPAQVPSQD 2175
Score = 31.2 bits (69), Expect = 2.7
Identities = 36/117 (30%), Positives = 41/117 (35%), Gaps = 24/117 (20%)
Query: 307 SCSAPEAPPP------LGAPTAARSCHRLEGWPPWVGPCFP----ELRRRVPRGGGR--- 353
S P P P LG+P A S P GP P ELR V +G G
Sbjct: 2834 SARFPSTPGPELGRQALGSPLAGISTRLPGPGEPVPGPAGPAQFIELRHNVQKGLGPGGT 2893
Query: 354 --PAAAPPTRAPTRRFSDSSGSLTPPGHR--------PPHPASPP-PLLLPRSHSDP 399
P PP R S+ L P G R P P++PP P L H P
Sbjct: 2894 PFPGQGPPQRPRFYPVSEDPHRLAPEGLRGLAVSGLPPQKPSAPPAPELNNSLHPTP 2950
Score = 30.4 bits (67), Expect = 4.6
Identities = 30/101 (29%), Positives = 36/101 (35%), Gaps = 19/101 (18%)
Query: 311 PEAPPPLGAPTAARSCHRLEGWPPWVGPCFPELRRRVPRGGGRPAAAPPTRAPTRRFSDS 370
P+ PP L AP A S P +GP P P+ RP+ P S S
Sbjct: 4283 PQGPPRLPAPPGALSTG------PVLGPVHPTPPPSSPQEPKRPSQLP---------SPS 4327
Query: 371 SGSLTPPGHRPPHPASP----PPLLLPRSHSDPGITTSSDT 407
S T P HP +P P L P P +DT
Sbjct: 4328 SQLPTEAQLPPTHPGTPKPQGPTLEPPPGRVSPAAAQLADT 4368
>gi|55750053 atrophin-1 [Homo sapiens]
Length = 1190
Score = 40.4 bits (93), Expect = 0.004
Identities = 64/243 (26%), Positives = 81/243 (33%), Gaps = 38/243 (15%)
Query: 299 PPRAARSYSCSAPEAPPPLGAPTAARSCHRLEGWPPWVGPCFPELRRRVPRGGGRPAAAP 358
PP S S S PP PT L PP FP + +P P
Sbjct: 255 PPTTPISVSSSGASGAPPTKPPTTPVGGGNLPSAPPPAN--FPHVTPNLP--------PP 304
Query: 359 PTRAPTRRFSDSS---GSLTPPGHRP-PHPAS------PP-----PLLLPRSHSDPGITT 403
P P S S G+ PGH P PH PP P L P HS P ++
Sbjct: 305 PALRPLNNASASPPGLGAQPLPGHLPSPHAMGQGMGGLPPGPEKGPTLAPSPHSLPPASS 364
Query: 404 SSDTADFRDLYTKVLEEEAASVSSADTGLCSEACLFRLARCPS--PKLLRARSAEKRRPV 461
S+ R Y+ AA+ SS+ + S + PS S
Sbjct: 365 SAPAPPMRFPYSSSSSSSAAASSSSSSSSSSASPFPASQALPSYPHSFPPPTSLSVSNQP 424
Query: 462 PTFQKVPLPS------GPAPAHSLGDL---KGSWPGRGLVTRFLQISRKAPDPSGTGAHG 512
P + + LPS GP P G L + PG + Q + A P T H
Sbjct: 425 PKYTQPSLPSQAVWSQGPPPPPPYGRLLANSNAHPGPFPPSTGAQST--AHPPVSTHHHH 482
Query: 513 HKQ 515
H+Q
Sbjct: 483 HQQ 485
Score = 37.0 bits (84), Expect = 0.049
Identities = 28/115 (24%), Positives = 45/115 (39%), Gaps = 9/115 (7%)
Query: 278 YCLSLDCGLRGPFEESPLPRRPPRAARSYSCSAPEAPPPLGAPTAARSCHRLEGWPPWVG 337
Y +S G P+ P PP + SYS + P PP + ++ S +
Sbjct: 530 YAMSPSLGSLRPYPPGPAHLPPPHSQVSYSQAGPNGPPVSSSSNSSSSTSQ------GSY 583
Query: 338 PCFPELRRRVPRGGGRPAAAPP---TRAPTRRFSDSSGSLTPPGHRPPHPASPPP 389
PC + P+G P P T + T ++ + +P G++ P PPP
Sbjct: 584 PCSHPSPSQGPQGAPYPFPPVPTVTTSSATLSTVIATVASSPAGYKTASPPGPPP 638
Score = 35.0 bits (79), Expect = 0.19
Identities = 30/104 (28%), Positives = 40/104 (38%), Gaps = 11/104 (10%)
Query: 306 YSCSAPEAPPPLGAPTAARSCHRLEGWPPWVGPCFPELRRRVPRG--GGRPAAAPPTRAP 363
Y ++P PPP G + ++ P + P R P G G P A P T P
Sbjct: 628 YKTASPPGPPPYGKRAPSPGAYKTATPPGYKPGSPPSFRTGTPPGYRGTSPPAGPGTFKP 687
Query: 364 TRRFSDSSGSLTPPG-----HRPPHPASP---PPLLLPRSHSDP 399
+ G L P G PP PA+P PPL + +P
Sbjct: 688 GSP-TVGPGPLPPAGPSGLPSLPPPPAAPASGPPLSATQIKQEP 730
Score = 31.2 bits (69), Expect = 2.7
Identities = 39/134 (29%), Positives = 46/134 (34%), Gaps = 25/134 (18%)
Query: 296 PRRPPRAARSYSCSAPEAPPPLGA-------PTAARSCHRLEGWPPWV--GPCFPELRRR 346
P PP A +A +PP LGA P+ + G PP GP
Sbjct: 299 PNLPPPPALRPLNNASASPPGLGAQPLPGHLPSPHAMGQGMGGLPPGPEKGPTLAPSPHS 358
Query: 347 VPRGGGRPAAAPPTRAPTRRFSD-----SSGSLTPPGHRPPHPAS----------PPPLL 391
+P A APP R P S SS S + P PAS PPP
Sbjct: 359 LPPASSS-APAPPMRFPYSSSSSSSAAASSSSSSSSSSASPFPASQALPSYPHSFPPPTS 417
Query: 392 LPRSHSDPGITTSS 405
L S+ P T S
Sbjct: 418 LSVSNQPPKYTQPS 431
Score = 29.6 bits (65), Expect = 7.8
Identities = 27/93 (29%), Positives = 35/93 (37%), Gaps = 9/93 (9%)
Query: 315 PPLGAPTAARSCHRLEGWPPWVGPCFPELRRRVPRGGGRPAAAPPTRAPTRRFSDSSGSL 374
PP+G P + + G P G P + + APPT+ PT +
Sbjct: 231 PPMG-PKGGGAASSVGG--PNGGKQHPPPTTPISVSSSGASGAPPTKPPTTPVGGGNLPS 287
Query: 375 TPPGHRPPHPA---SPPPLLLP---RSHSDPGI 401
PP PH PPP L P S S PG+
Sbjct: 288 APPPANFPHVTPNLPPPPALRPLNNASASPPGL 320
>gi|55750041 atrophin-1 [Homo sapiens]
Length = 1190
Score = 40.4 bits (93), Expect = 0.004
Identities = 64/243 (26%), Positives = 81/243 (33%), Gaps = 38/243 (15%)
Query: 299 PPRAARSYSCSAPEAPPPLGAPTAARSCHRLEGWPPWVGPCFPELRRRVPRGGGRPAAAP 358
PP S S S PP PT L PP FP + +P P
Sbjct: 255 PPTTPISVSSSGASGAPPTKPPTTPVGGGNLPSAPPPAN--FPHVTPNLP--------PP 304
Query: 359 PTRAPTRRFSDSS---GSLTPPGHRP-PHPAS------PP-----PLLLPRSHSDPGITT 403
P P S S G+ PGH P PH PP P L P HS P ++
Sbjct: 305 PALRPLNNASASPPGLGAQPLPGHLPSPHAMGQGMGGLPPGPEKGPTLAPSPHSLPPASS 364
Query: 404 SSDTADFRDLYTKVLEEEAASVSSADTGLCSEACLFRLARCPS--PKLLRARSAEKRRPV 461
S+ R Y+ AA+ SS+ + S + PS S
Sbjct: 365 SAPAPPMRFPYSSSSSSSAAASSSSSSSSSSASPFPASQALPSYPHSFPPPTSLSVSNQP 424
Query: 462 PTFQKVPLPS------GPAPAHSLGDL---KGSWPGRGLVTRFLQISRKAPDPSGTGAHG 512
P + + LPS GP P G L + PG + Q + A P T H
Sbjct: 425 PKYTQPSLPSQAVWSQGPPPPPPYGRLLANSNAHPGPFPPSTGAQST--AHPPVSTHHHH 482
Query: 513 HKQ 515
H+Q
Sbjct: 483 HQQ 485
Score = 37.0 bits (84), Expect = 0.049
Identities = 28/115 (24%), Positives = 45/115 (39%), Gaps = 9/115 (7%)
Query: 278 YCLSLDCGLRGPFEESPLPRRPPRAARSYSCSAPEAPPPLGAPTAARSCHRLEGWPPWVG 337
Y +S G P+ P PP + SYS + P PP + ++ S +
Sbjct: 530 YAMSPSLGSLRPYPPGPAHLPPPHSQVSYSQAGPNGPPVSSSSNSSSSTSQ------GSY 583
Query: 338 PCFPELRRRVPRGGGRPAAAPP---TRAPTRRFSDSSGSLTPPGHRPPHPASPPP 389
PC + P+G P P T + T ++ + +P G++ P PPP
Sbjct: 584 PCSHPSPSQGPQGAPYPFPPVPTVTTSSATLSTVIATVASSPAGYKTASPPGPPP 638
Score = 35.0 bits (79), Expect = 0.19
Identities = 30/104 (28%), Positives = 40/104 (38%), Gaps = 11/104 (10%)
Query: 306 YSCSAPEAPPPLGAPTAARSCHRLEGWPPWVGPCFPELRRRVPRG--GGRPAAAPPTRAP 363
Y ++P PPP G + ++ P + P R P G G P A P T P
Sbjct: 628 YKTASPPGPPPYGKRAPSPGAYKTATPPGYKPGSPPSFRTGTPPGYRGTSPPAGPGTFKP 687
Query: 364 TRRFSDSSGSLTPPG-----HRPPHPASP---PPLLLPRSHSDP 399
+ G L P G PP PA+P PPL + +P
Sbjct: 688 GSP-TVGPGPLPPAGPSGLPSLPPPPAAPASGPPLSATQIKQEP 730
Score = 31.2 bits (69), Expect = 2.7
Identities = 39/134 (29%), Positives = 46/134 (34%), Gaps = 25/134 (18%)
Query: 296 PRRPPRAARSYSCSAPEAPPPLGA-------PTAARSCHRLEGWPPWV--GPCFPELRRR 346
P PP A +A +PP LGA P+ + G PP GP
Sbjct: 299 PNLPPPPALRPLNNASASPPGLGAQPLPGHLPSPHAMGQGMGGLPPGPEKGPTLAPSPHS 358
Query: 347 VPRGGGRPAAAPPTRAPTRRFSD-----SSGSLTPPGHRPPHPAS----------PPPLL 391
+P A APP R P S SS S + P PAS PPP
Sbjct: 359 LPPASSS-APAPPMRFPYSSSSSSSAAASSSSSSSSSSASPFPASQALPSYPHSFPPPTS 417
Query: 392 LPRSHSDPGITTSS 405
L S+ P T S
Sbjct: 418 LSVSNQPPKYTQPS 431
Score = 29.6 bits (65), Expect = 7.8
Identities = 27/93 (29%), Positives = 35/93 (37%), Gaps = 9/93 (9%)
Query: 315 PPLGAPTAARSCHRLEGWPPWVGPCFPELRRRVPRGGGRPAAAPPTRAPTRRFSDSSGSL 374
PP+G P + + G P G P + + APPT+ PT +
Sbjct: 231 PPMG-PKGGGAASSVGG--PNGGKQHPPPTTPISVSSSGASGAPPTKPPTTPVGGGNLPS 287
Query: 375 TPPGHRPPHPA---SPPPLLLP---RSHSDPGI 401
PP PH PPP L P S S PG+
Sbjct: 288 APPPANFPHVTPNLPPPPALRPLNNASASPPGL 320
>gi|19924099 synapsin I isoform Ia [Homo sapiens]
Length = 705
Score = 40.4 bits (93), Expect = 0.004
Identities = 33/101 (32%), Positives = 41/101 (40%), Gaps = 8/101 (7%)
Query: 293 SPLPRR---PPRAARSYSCSAPEAPPPLGAPTAARSCHRLEGWPPWVGPCFPELRRRVPR 349
SP P+R PP+A R S S P P GAP + PP GP P R+ +
Sbjct: 551 SPSPQRQAGPPQATRQTSVSGPAPPKASGAPPGGQQRQGPPQKPP--GPAGP--TRQASQ 606
Query: 350 GGGRPAAAPP-TRAPTRRFSDSSGSLTPPGHRPPHPASPPP 389
G P PP T+ P +G P + P PPP
Sbjct: 607 AGPVPRTGPPTTQQPRPSGPGPAGRPKPQLAQKPSQDVPPP 647
Score = 37.7 bits (86), Expect = 0.029
Identities = 42/138 (30%), Positives = 51/138 (36%), Gaps = 32/138 (23%)
Query: 288 GPFEESPLPRRPPRAARSYSCSAPEAPPPL--------------GAPTAAR-----SCHR 328
GP SPLP+R P + A +A PP GAP AAR S R
Sbjct: 497 GPPAGSPLPQRLPSPTSAPQQPASQAAPPTQGQGRQSRPVAGGPGAPPAARPPASPSPQR 556
Query: 329 LEGWPPWV-------GPCFPELRRRVPRG---GGRPAAAPPTRAPTRRFSDSS--GSLTP 376
G PP GP P+ P G G P P PTR+ S + P
Sbjct: 557 QAG-PPQATRQTSVSGPAPPKASGAPPGGQQRQGPPQKPPGPAGPTRQASQAGPVPRTGP 615
Query: 377 PGHRPPHPASPPPLLLPR 394
P + P P+ P P P+
Sbjct: 616 PTTQQPRPSGPGPAGRPK 633
>gi|19924097 synapsin I isoform Ib [Homo sapiens]
Length = 669
Score = 40.4 bits (93), Expect = 0.004
Identities = 33/101 (32%), Positives = 41/101 (40%), Gaps = 8/101 (7%)
Query: 293 SPLPRR---PPRAARSYSCSAPEAPPPLGAPTAARSCHRLEGWPPWVGPCFPELRRRVPR 349
SP P+R PP+A R S S P P GAP + PP GP P R+ +
Sbjct: 551 SPSPQRQAGPPQATRQTSVSGPAPPKASGAPPGGQQRQGPPQKPP--GPAGP--TRQASQ 606
Query: 350 GGGRPAAAPP-TRAPTRRFSDSSGSLTPPGHRPPHPASPPP 389
G P PP T+ P +G P + P PPP
Sbjct: 607 AGPVPRTGPPTTQQPRPSGPGPAGRPKPQLAQKPSQDVPPP 647
Score = 37.7 bits (86), Expect = 0.029
Identities = 42/138 (30%), Positives = 51/138 (36%), Gaps = 32/138 (23%)
Query: 288 GPFEESPLPRRPPRAARSYSCSAPEAPPPL--------------GAPTAAR-----SCHR 328
GP SPLP+R P + A +A PP GAP AAR S R
Sbjct: 497 GPPAGSPLPQRLPSPTSAPQQPASQAAPPTQGQGRQSRPVAGGPGAPPAARPPASPSPQR 556
Query: 329 LEGWPPWV-------GPCFPELRRRVPRG---GGRPAAAPPTRAPTRRFSDSS--GSLTP 376
G PP GP P+ P G G P P PTR+ S + P
Sbjct: 557 QAG-PPQATRQTSVSGPAPPKASGAPPGGQQRQGPPQKPPGPAGPTRQASQAGPVPRTGP 615
Query: 377 PGHRPPHPASPPPLLLPR 394
P + P P+ P P P+
Sbjct: 616 PTTQQPRPSGPGPAGRPK 633
>gi|239754138 PREDICTED: hypothetical protein [Homo sapiens]
Length = 274
Score = 40.0 bits (92), Expect = 0.006
Identities = 60/214 (28%), Positives = 81/214 (37%), Gaps = 46/214 (21%)
Query: 287 RGPFEESPLPRRPPRAARSYSCSAPEAPPP--------LGAPTAARSCHRLEGWPPWV-- 336
R P LP PPRA +PE PPP LGA AA HRL V
Sbjct: 49 RSPSSRLKLPADPPRALPG----SPEPPPPPPPAAPHVLGARVAAGPTHRLSASHSRVSS 104
Query: 337 -GPCFPELRR--RVPRGGGRPAAAPPTRAPTRRFSDSSGSLTPPGHRPPHPASPPPLLLP 393
GP + +R + R G R +A P R S +PP PPP
Sbjct: 105 RGPVGTKPKRPGQGRRAGARMRSAAPASPRARAARAISNQSSPP---------PPPPSRA 155
Query: 394 RSH----SDPGITTSSDTADFRDLYTKVLEEEAASVSSADTGLCSEACLFRLARCPSPKL 449
RS S PG ++ A R+ ++ ++ + G C+ A + AR ++
Sbjct: 156 RSRSLRLSAPGSRHDAEKASERN---RLRRKKRLVLGRGGGGECAHAHEWECAR----RM 208
Query: 450 LR-ARSAEKRRPVPT--------FQKVPLPSGPA 474
R R+ RRP+ + VP SGPA
Sbjct: 209 RRGCRTLTARRPLDSGRGLSPLILAWVPALSGPA 242
>gi|239742631 PREDICTED: hypothetical protein XP_002342600 [Homo
sapiens]
Length = 274
Score = 40.0 bits (92), Expect = 0.006
Identities = 60/214 (28%), Positives = 81/214 (37%), Gaps = 46/214 (21%)
Query: 287 RGPFEESPLPRRPPRAARSYSCSAPEAPPP--------LGAPTAARSCHRLEGWPPWV-- 336
R P LP PPRA +PE PPP LGA AA HRL V
Sbjct: 49 RSPSSRLKLPADPPRALPG----SPEPPPPPPPAAPHVLGARVAAGPTHRLSASHSRVSS 104
Query: 337 -GPCFPELRR--RVPRGGGRPAAAPPTRAPTRRFSDSSGSLTPPGHRPPHPASPPPLLLP 393
GP + +R + R G R +A P R S +PP PPP
Sbjct: 105 RGPVGTKPKRPGQGRRAGARMRSAAPASPRARAARAISNQSSPP---------PPPPSRA 155
Query: 394 RSH----SDPGITTSSDTADFRDLYTKVLEEEAASVSSADTGLCSEACLFRLARCPSPKL 449
RS S PG ++ A R+ ++ ++ + G C+ A + AR ++
Sbjct: 156 RSRSLRLSAPGSRHDAEKASERN---RLRRKKRLVLGRGGGGECAHAHEWECAR----RM 208
Query: 450 LR-ARSAEKRRPVPT--------FQKVPLPSGPA 474
R R+ RRP+ + VP SGPA
Sbjct: 209 RRGCRTLTARRPLDSGRGLSPLILAWVPALSGPA 242
>gi|24850117 misshapen/NIK-related kinase isoform 2 [Homo sapiens]
Length = 1303
Score = 40.0 bits (92), Expect = 0.006
Identities = 66/293 (22%), Positives = 107/293 (36%), Gaps = 45/293 (15%)
Query: 291 EESPLPRRPPRAARSYSCSAPEAPPPLGAPTAARSCHRLEGWPPWVGPCFPE-------L 343
+ SPL + P + + PE P P +P L PP P P+ +
Sbjct: 533 QNSPLAKSKPGS------TGPEPPIPQASPGPPGP---LSQTPPMQRPVEPQEGPHKSLV 583
Query: 344 RRRVPRGGGRPAAAPPTRAPTRRFSDSSGSLTPPGHRPPHPASPPPLLLP-------RSH 396
RVP +P AAP R+ + + + P P PA P P P R +
Sbjct: 584 AHRVPL---KPYAAPVPRSQSLQDQPTRNLAAFPASHDPDPAIPAPTATPSARGAVIRQN 640
Query: 397 SDPGITTSSDTADFRDLYTKVLEEEAASVSSADTGLCSEACLFRLARCPSPKLLRARSAE 456
SDP + + + + E V + + + + +RA + +
Sbjct: 641 SDP-TSEGPGPSPNPPAWVRPDNEAPPKVPQRTSSIATALNTSGAGGSRPAQAVRASNPD 699
Query: 457 KRRPVPTFQKVP--LPSGPAPAHSLGDLKGSWPGRGLVTRFLQISRKAPDPSGTGAHGHK 514
RR P +++ LP+ G L+ + G +S K PD S + G+K
Sbjct: 700 LRRSDPGWERSDSVLPASHGHLPQAGSLERNRVG---------VSSK-PDSSPVLSPGNK 749
Query: 515 QVPRSLWGRPGRESLHLRSCGDLSSSSSLRRLLSGRRLERGTRPHSLSLNGGS 567
P RPGR + + R+ G+ LL R L+ RP +++ S
Sbjct: 750 AKPDDHRSRPGRPASYKRAIGEDFV------LLKERTLDEAPRPPKKAMDYSS 796
>gi|224451133 splicing factor, arginine/serine-rich 15 isoform 2
[Homo sapiens]
Length = 1132
Score = 40.0 bits (92), Expect = 0.006
Identities = 40/133 (30%), Positives = 50/133 (37%), Gaps = 16/133 (12%)
Query: 293 SPLPRRPPRAARSYSCSAPEAPPPLGAPTAARSCHRLEGWPPWVG----PCF-PELRRRV 347
SP+P+ P AP PP P + PP VG P F P L +
Sbjct: 641 SPIPKPLPVPVPPIPVPAPITVPPPQVPPH-------QPGPPVVGALQPPAFTPPLG--I 691
Query: 348 PRGGGRPAAAPPTRAPTRRFSDSSGSLTPPGHRPPHPASP--PPLLLPRSHSDPGITTSS 405
P G P PP P + PPG PP P P PP+ +P H+ P +S
Sbjct: 692 PPPGFGPGVPPPPPPPPFLRPGFNPMHLPPGFLPPGPPPPITPPVSIPPPHTPPISIPNS 751
Query: 406 DTADFRDLYTKVL 418
A + TK L
Sbjct: 752 TIAGINEDTTKDL 764
Score = 30.0 bits (66), Expect = 6.0
Identities = 16/39 (41%), Positives = 18/39 (46%), Gaps = 4/39 (10%)
Query: 123 GPLGCTSPPPAPLLHTMLDLEE----FVPPVPPPPYYPP 157
GP PPP P L + F+PP PPPP PP
Sbjct: 697 GPGVPPPPPPPPFLRPGFNPMHLPPGFLPPGPPPPITPP 735
>gi|40789229 splicing factor, arginine/serine-rich 15 isoform 1
[Homo sapiens]
Length = 1147
Score = 40.0 bits (92), Expect = 0.006
Identities = 40/133 (30%), Positives = 50/133 (37%), Gaps = 16/133 (12%)
Query: 293 SPLPRRPPRAARSYSCSAPEAPPPLGAPTAARSCHRLEGWPPWVG----PCF-PELRRRV 347
SP+P+ P AP PP P + PP VG P F P L +
Sbjct: 656 SPIPKPLPVPVPPIPVPAPITVPPPQVPPH-------QPGPPVVGALQPPAFTPPLG--I 706
Query: 348 PRGGGRPAAAPPTRAPTRRFSDSSGSLTPPGHRPPHPASP--PPLLLPRSHSDPGITTSS 405
P G P PP P + PPG PP P P PP+ +P H+ P +S
Sbjct: 707 PPPGFGPGVPPPPPPPPFLRPGFNPMHLPPGFLPPGPPPPITPPVSIPPPHTPPISIPNS 766
Query: 406 DTADFRDLYTKVL 418
A + TK L
Sbjct: 767 TIAGINEDTTKDL 779
Score = 30.0 bits (66), Expect = 6.0
Identities = 16/39 (41%), Positives = 18/39 (46%), Gaps = 4/39 (10%)
Query: 123 GPLGCTSPPPAPLLHTMLDLEE----FVPPVPPPPYYPP 157
GP PPP P L + F+PP PPPP PP
Sbjct: 712 GPGVPPPPPPPPFLRPGFNPMHLPPGFLPPGPPPPITPP 750
>gi|77681565 NG5 protein [Homo sapiens]
Length = 306
Score = 40.0 bits (92), Expect = 0.006
Identities = 39/114 (34%), Positives = 46/114 (40%), Gaps = 11/114 (9%)
Query: 291 EESPLPRRPPRAARS-YSCSAPEAPPPLGAPTAARSCHRLEGWPPWVGPCFPELRRRVPR 349
E+S LP P + Y+ P A PP P AA S H R+
Sbjct: 4 EKSGLPDSVPHTSPPPYNAPQPPAEPPAPPPQAAPSSHHHH--HHHYHQSGTATLPRLGA 61
Query: 350 GGGRPAAAPPTRAPTRRFSDSSGSLTPPGHRPPHPA--SPPP--LLLPRSHSDP 399
GG +AA R P S S+ PP H PP PA +PPP LPR DP
Sbjct: 62 GGLASSAATAQRGP----SSSATLPRPPHHAPPGPAAGAPPPGCATLPRMPPDP 111
Score = 31.2 bits (69), Expect = 2.7
Identities = 31/90 (34%), Positives = 33/90 (36%), Gaps = 14/90 (15%)
Query: 277 GYCLSLDCGLRGPFEESPLPRRPPRAARSYSCSAPEAPPPLGAPTAARSCHRLEGWPPWV 336
G S RGP + LPR P A A APPP C L PP
Sbjct: 63 GLASSAATAQRGPSSSATLPRPPHHAPPG---PAAGAPPP--------GCATLPRMPP-- 109
Query: 337 GPCFPELRRRVPRGGGRP-AAAPPTRAPTR 365
P E R P P AAAPP AP +
Sbjct: 110 DPYLQETRFEGPLPPPPPAAAAPPPPAPAQ 139
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.135 0.426
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,765,553
Number of Sequences: 37866
Number of extensions: 1920322
Number of successful extensions: 15963
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 667
Number of HSP's that attempted gapping in prelim test: 12278
Number of HSP's gapped (non-prelim): 3701
length of query: 572
length of database: 18,247,518
effective HSP length: 108
effective length of query: 464
effective length of database: 14,157,990
effective search space: 6569307360
effective search space used: 6569307360
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.