Guide to the Human Genome
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Name: ZNF547 Sequence: fasta or formatted (402aa) NCBI GI: 38044286
Description:

zinc finger protein 547

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.0         16           2
 C cysteine            6.7         27           2
 D aspartate           2.0          8           1
 E glutamate           8.5         34           2
 F phenylalanine       4.5         18           2
 G glycine             7.7         31           2
 H histidine           8.0         32           1
 I isoleucine          2.5         10           1
 K lysine              6.7         27           1
 L leucine             8.2         33           2
 M methionine          2.0          8           1
 N asparagine          2.5         10           1
 P proline             3.5         14           1
 Q glutamine           5.0         20           1
 R arginine            6.7         27           1
 S serine              7.7         31           2
 T threonine           6.2         25           1
 V valine              4.2         17           2
 W tryptophan          0.5          2           1
 Y tyrosine            3.0         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 547 
ZNF548                0.600   zinc finger protein 548 
ZNF17                 0.586   zinc finger protein 17 
ZNF749                0.534   zinc finger protein 749 
ZNF772                0.514   zinc finger protein 772 isoform 2 
ZNF772                0.490   zinc finger protein 772 isoform 1 
ZIK1                  0.485   zinc finger protein interacting with K protein 1 [Ho...
ZNF419                0.476   zinc finger protein 419 isoform 7 
ZNF419                0.471   zinc finger protein 419 isoform 6 
ZNF419                0.471   zinc finger protein 419 isoform 5 
ZNF418                0.468   zinc finger protein 418 
ZNF256                0.465   zinc finger protein 256 
ZNF211                0.459   zinc finger protein 211 isoform 2 
ZNF530                0.458   zinc finger protein 530 
ZNF773                0.457   zinc finger protein 773 
ZNF419                0.457   zinc finger protein 419 isoform 4 
ZNF211                0.457   zinc finger protein 211 isoform 1 
ZNF154                0.453   zinc finger protein 154 
ZNF304                0.452   zinc finger protein 304 
ZNF419                0.451   zinc finger protein 419 isoform 3 
ZNF419                0.451   zinc finger protein 419 isoform 1 
ZNF419                0.449   zinc finger protein 419 isoform 2 
ZNF416                0.448   zinc finger protein 416 
ZNF417                0.446   zinc finger protein 417 
LOC100293516          0.446   PREDICTED: similar to zinc finger protein 587 [Homo...
ZNF587                0.444   zinc finger protein 587 
LOC100288322          0.442   PREDICTED: similar to zinc finger protein 587 [Homo...
LOC100288322          0.442   PREDICTED: hypothetical protein XP_002343703 
ZNF132                0.439   zinc finger protein 132 
ZNF586                0.436   zinc finger protein 586 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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